View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1314_high_6 (Length: 622)
Name: NF1314_high_6
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_high_6 |
 | |
|
| [»] scaffold0690 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 513; Significance: 0; HSPs: 26)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 6 - 546
Target Start/End: Original strand, 8962499 - 8963039
Alignment:
| Q |
6 |
ctccaacaatatcagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacc |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8962499 |
ctccaaaaatatcagactttggtttagccaagttgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacc |
8962598 |
T |
|
| Q |
106 |
tgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatact |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8962599 |
tgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatact |
8962698 |
T |
|
| Q |
206 |
aagacagtcacagataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatg |
305 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8962699 |
aagacagtcacagatgaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatg |
8962798 |
T |
|
| Q |
306 |
gagattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatgct |
405 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8962799 |
gagattatagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaatggtggtgcagatgct |
8962898 |
T |
|
| Q |
406 |
acatggagagttagacaagttaaaagttcccaccaatcctttcaatgattcatcttcaactaacggaaccgcatatacagctacagaatatttcaattca |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8962899 |
acatggagagttagacaagttaaaagttcccaccaatcctttcaatgattcatcttcaactaacggaaccgcatatacagctacagaatatttcaattca |
8962998 |
T |
|
| Q |
506 |
gaactagatgtgattcgagaacgggaatagaatagaatata |
546 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
8962999 |
gaactagatgtgattcaagaactggaatagaatagaatata |
8963039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 521
Target Start/End: Original strand, 8939573 - 8940087
Alignment:
| Q |
7 |
tccaacaatatcagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacct |
106 |
Q |
| |
|
||||| |||||||||||| |||||||| |||||||||||||||||||||| || ||||| ||||| || || |||||||| ||||| |||||||||||| |
|
|
| T |
8939573 |
tccaaaaatatcagacttcggtttagctaagctgtgctccaaaaatcaaagtacagtatcaatgaccgcagccaggggaactttagggtacatggcacct |
8939672 |
T |
|
| Q |
107 |
gaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatacta |
206 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8939673 |
gaagttttttctcgaaactttgggaatgtctcttataagtctgatatatacagctacggtatgttgctgctggagatggttggaggaagaaagaatacta |
8939772 |
T |
|
| Q |
207 |
agacagtcacagataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatgg |
306 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| || ||||||| ||||||||||| || |
|
|
| T |
8939773 |
agacagtcacaggtgaagaaaattttcaagtattgtatccagattggatccatggtttatttgaaggtggagacgtatatatcccaattgatgaagaggg |
8939872 |
T |
|
| Q |
307 |
agattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatgcta |
406 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||| | ||||| |||||||| |
|
|
| T |
8939873 |
agattttagaattgcaaagaaactagcgattgtcggactttggtgcattcagtggcactccgtgcatcgaccgtccatgaaatctgtggttcagatgctt |
8939972 |
T |
|
| Q |
407 |
catggagagttagacaagttaaaagttcccaccaatcctttcaatgattcatcttcaactaacggaaccgcatatacagctacagaatatttcaattcag |
506 |
Q |
| |
|
|| |||||| |||||| |||||||||||||||||||||||||||| |||||| |||||||| |||| | | |||| | | | | || ||| ||||||| |
|
|
| T |
8939973 |
caaggagagggagacaaattaaaagttcccaccaatcctttcaatgcttcatcatcaactaatagaactgtaaatactgttgccggatgtttgaattcag |
8940072 |
T |
|
| Q |
507 |
aactagatgtgattc |
521 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
8940073 |
aactagatgttattc |
8940087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 7 - 457
Target Start/End: Original strand, 8927147 - 8927600
Alignment:
| Q |
7 |
tccaacaatatcagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacct |
106 |
Q |
| |
|
||||| |||||| ||||| |||||||| ||||||||||| |||||||| | | ||||||||||||||| || |||||||||||||| |||||||||||| |
|
|
| T |
8927147 |
tccaaaaatatcggacttcggtttagcgaagctgtgctctaaaaatcatagcactgtatcgatgactgcagccaggggaacattaggttacatggcacct |
8927246 |
T |
|
| Q |
107 |
gaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatacta |
206 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
8927247 |
gaagttttttctcgaaactttgggaatgtctcttataagtctgatatatacagctacggtatgttgttgctagagatggttggaggaagaaagaatacta |
8927346 |
T |
|
| Q |
207 |
agacagtcacagata---aagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaaga |
303 |
Q |
| |
|
| ||| || | | |||||||||| |||||| ||||||||||||||||||| ||||| ||||||| ||||| || ||||||| ||||||||||| |
|
|
| T |
8927347 |
aaacaactactggtggcgaagaaaatttccaagttctgtatccagattggatccatggtttacttgaaggtggagacgtatatatcccaattgatgaaga |
8927446 |
T |
|
| Q |
304 |
tggagattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatg |
403 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||||| |||||||||||| |
|
|
| T |
8927447 |
gggagattgtagaattgcaaaaaaactagcaattgtcggactttggtgcattcagtggcactccgtgcatcggccgtccatgaaaactgtggtgcagatg |
8927546 |
T |
|
| Q |
404 |
ctacatggagagttagacaagttaaaagttcccaccaatcctttcaatgattca |
457 |
Q |
| |
|
|| || |||||| |||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
8927547 |
cttcaaggagagggagacaaattaaaagttcccaccaatcctttcaatgcttca |
8927600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 18 - 447
Target Start/End: Complemental strand, 9466634 - 9466205
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
||||||| ||||| || ||| ||||||| ||||||| || || || || ||||| || || | ||||| ||||| ||||||||||| ||||| ||||| |
|
|
| T |
9466634 |
cagacttcggtttggctaagatgtgctcgaaaaatcgaagtacagtgtctatgaccgcagccaaaggaacgttaggctacatggcacccgaagttttttc |
9466535 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
| ||||||| ||||||||||| ||||| ||||||||||| || ||||| |||||| || |||||||||| | ||||||||||||||| || ||| |||| |
|
|
| T |
9466534 |
tagaaacttcgggaatgtctcatataagtctgatatatatagttatggtatgttgttgttggagatggttgcaggaagaaagaatacaaacacaaccaca |
9466435 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
| | |||||||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||| ||||| |||||||| || | |
|
|
| T |
9466434 |
ggtgaagaaaatttacaagttctatatccagattggatccacgatttgcttgaagggggagacatacaaatccctattgacgaagagggagatttcagga |
9466335 |
T |
|
| Q |
318 |
ttgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatgctacatggagagtt |
417 |
Q |
| |
|
|| |||| ||| | || ||||| |||||| ||||||| |||||||| | ||||||| ||| |||||||||| ||| | || |||||||| || || |
|
|
| T |
9466334 |
ttccaaaaaaaatggcgattgttggacttcggtgcatccagtggcaacctatgcatcgtccatccatgaaaactgtgatacaaatgctacaaggtgatgg |
9466235 |
T |
|
| Q |
418 |
agacaagttaaaagttcccaccaatccttt |
447 |
Q |
| |
|
||||||||||||||| |||| ||||||||| |
|
|
| T |
9466234 |
agacaagttaaaagtccccagcaatccttt |
9466205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 18 - 351
Target Start/End: Original strand, 9364604 - 9364937
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
|||| |||||||| |||||| | || || |||||||||| ||| ||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
9364604 |
cagattttggtttggccaagatatgttcaaaaaatcaaagtatcgtatccatgactgcagctaagggaacattaggctacatggcacctgaagttttttc |
9364703 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| || || ||||| || |||| ||||| ||||||||||||||||| || ||| | | |
|
|
| T |
9364704 |
aagaaactttggtaatgtctcttataagtctgatatatacagttacggtatgttattgttggaaatggttggaggaagaaagaatacaaaaacaattagt |
9364803 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
| |||||||| | |||||| ||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9364804 |
ggcgaagaaaatatacaagttgagtatccagactggatccacaatttgcttgaaggaggagatatacatatccctattgatgaagagggagattttagaa |
9364903 |
T |
|
| Q |
318 |
ttgcaaagaaactagcaattgtcggactttggtg |
351 |
Q |
| |
|
|| |||| ||| | |||| ||| ||||| ||||| |
|
|
| T |
9364904 |
ttccaaaaaaattggcaactgtgggactatggtg |
9364937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 23 - 354
Target Start/End: Complemental strand, 9257404 - 9257069
Alignment:
| Q |
23 |
tttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaa |
122 |
Q |
| |
|
|||||||| || ||| ||||||| |||||||||| || | |||| |||||||| || || ||||||||||||||||||||||| ||||| |||||| ||| |
|
|
| T |
9257404 |
tttggtttggctaagatgtgctcaaaaaatcaaagtactatatctatgactgcagcgagaggaacattaggatacatggcacccgaagttttttctagaa |
9257305 |
T |
|
| Q |
123 |
actttgggaatgtctctta----taaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcacag |
218 |
Q |
| |
|
||||||| ||||||||||| ||| ||||||||||| |||||||| || ||||| |||| || || ||||||||||||||||| || || |||| |
|
|
| T |
9257304 |
actttggtaatgtctcttaattataagtctgatatatatagctatggtatattgctattggaaattgttggaggaagaaagaatacaaatccaaccacaa |
9257205 |
T |
|
| Q |
219 |
ataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaat |
318 |
Q |
| |
|
|| ||||||| ||||||||| | |||||||||||||||||||||||| || |||| | ||| ||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
9257204 |
atgaagaaaactttcaagttctatatccagattggatccacggtttgcttaaaggagaagaaatacatatcgctatagatgaagagggagattttagaat |
9257105 |
T |
|
| Q |
319 |
tgcaaagaaactagcaattgtcggactttggtgcat |
354 |
Q |
| |
|
||| || ||| | ||||| || |||||||||||||| |
|
|
| T |
9257104 |
tgcgaaaaaattggcaatcgtgggactttggtgcat |
9257069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 435
Target Start/End: Original strand, 9300301 - 9300721
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
||||||| ||||| || ||| ||||||| |||||||||| || | |||| ||||| ||||| | ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
9300301 |
cagacttcggtttggctaagatgtgctcgaaaaatcaaagtactatatctatgaccgcggccaaaggaacattaggatacatggcacccgaagttttttc |
9300400 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
| ||||||||||||||||||||||||| || |||||||| || ||||| |||||| ||||||||||||| || ||||| |||||| | || ||| |||| |
|
|
| T |
9300401 |
tagaaactttgggaatgtctcttataagtccgatatatatagttatggcatgttgttgctggagatggttgggggaaggaagaattcgaacacaaccaca |
9300500 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaaga--tgga-gatttta |
314 |
Q |
| |
|
| ||| || | |||||||| |||||||||||||||||| |||| ||||||| ||||| ||||| |||||||| |||||||| ||| ||||| | |
|
|
| T |
9300501 |
agtgaaggaagtccacaagttttatatccagattggatccacagtttagttgaaggaggagacatacaaatccctatagatgaagaacaggatgatttca |
9300600 |
T |
|
| Q |
315 |
gaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatgctacatggaga |
414 |
Q |
| |
|
|||||||||| ||| | |||||||| ||| | ||||||||||||||||| | ||||||| || |||||||||| ||| |||| ||| |||| ||||| |
|
|
| T |
9300601 |
gaattgcaaaaaaaatggcaattgtgggattatggtgcattcagtggcaacctatgcatcgtccgtccatgaaaactgtgttgcaaatgttacaaggaga |
9300700 |
T |
|
| Q |
415 |
gttagacaagttaaaagttcc |
435 |
Q |
| |
|
| ||||||| |||||||||| |
|
|
| T |
9300701 |
gggagacaagctaaaagttcc |
9300721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 18 - 351
Target Start/End: Complemental strand, 9242440 - 9242107
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
|||| |||||||| |||||| |||| || |||||||||| ||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9242440 |
cagattttggtttggccaagatgtgttcgaaaaatcaaagtattgtatccatgactgcggctaagggaacagtaggctacatggcacctgaagttttttc |
9242341 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
| |||| ||||| |||||||||||||| || ||| ||||||| || || ||||| || |||||||||| ||||||||||||||||| || ||| |
|
|
| T |
9242340 |
tagaaattttggaaatgtctcttataagtccgatgtatacagttacggtatgttattgttggagatggttggaggaagaaagaatacaaaaacaacaggt |
9242241 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
| | |||||||| | ||| || ||||||||| ||||||||| |||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
9242240 |
ggtgaagaaaatatacaaattgagtatccagactggatccacaatttgcttgaaggaggagatatacaaatccctattgatgaagagggagattttagaa |
9242141 |
T |
|
| Q |
318 |
ttgcaaagaaactagcaattgtcggactttggtg |
351 |
Q |
| |
|
|| |||| ||| | |||| ||| ||||| ||||| |
|
|
| T |
9242140 |
ttccaaaaaaattggcaactgtgggactatggtg |
9242107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 18 - 432
Target Start/End: Original strand, 9337745 - 9338156
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
|||| |||||||| |||||| | || || |||||||||| | | ||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
9337745 |
cagattttggtttggccaagatatgttcaaaaaatcaaagtgtcgtatccatgactgcagctaagggaacattaggctacatggcacctgaagttttttc |
9337844 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| || || ||||| || |||| ||||| ||||||||||||||||| || ||| | | |
|
|
| T |
9337845 |
aagaaactttggtaatgtctcttataagtctgatatatacagttacggtatgttattgttggaaatggttggaggaagaaagaatacaaaaacaattagt |
9337944 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
| |||||||| | |||||| ||||||||| ||||||||| |||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
9337945 |
ggcgaagaaaatatacaagttgagtatccagactggatccacaatttgcttgaa---ggagagatacaaatccctattgatgaagacggagattttagaa |
9338041 |
T |
|
| Q |
318 |
ttgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatgctacatggagagtt |
417 |
Q |
| |
|
|| |||| ||| | |||| ||| ||||| ||||| || || ||||| | ||||||| || | |||||| | ||| |||| ||||| || |||||| |
|
|
| T |
9338042 |
ttccaaaaaaattggcaactgtgggactatggtgtatccaatggcaccctttgcatcgtccgacaatgaaatctgtgatgcaaatgctccaaggagaggg |
9338141 |
T |
|
| Q |
418 |
agacaagttaaaagt |
432 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
9338142 |
ggacaagttaaaagt |
9338156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 68 - 405
Target Start/End: Complemental strand, 9236258 - 9235924
Alignment:
| Q |
68 |
atgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaa |
167 |
Q |
| |
|
|||||||| || || ||||| || |||||||| ||||||||||| || || ||||||| || ||||| |||||||| |||||||| || ||||| || | |
|
|
| T |
9236258 |
atgactgcagcgagaggaaccttgggatacattgcacctgaagttttctcgagaaacttcggaaatgtttcttataagtctgatatttatagctacggta |
9236159 |
T |
|
| Q |
168 |
tgttgctgctggagatggtcggaggaagaaagaatactaagacagtcacagataaagaaaattttcaagttttgtatccagattggatccacggtttgtt |
267 |
Q |
| |
|
||||| |||| |||||||| || ||||||||||||||||| |||| ||| || |||| || ||||||||||| ||||| ||||| ||| |||| | |
|
|
| T |
9236158 |
tgttgttgcttgagatggttggtggaagaaagaatactaa-ccagt--cagccaaggaaacattccaagttttgtacccagaatggattcacaatttgat |
9236062 |
T |
|
| Q |
268 |
tgaagggggagatatacatatccctattgatgaagatggagattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattca |
367 |
Q |
| |
|
|||||| ||| ||| | |||||| || || |||||| ||||||||||||||||||| || | |||||||||||||| ||||||||| || | |
|
|
| T |
9236061 |
tgaaggtaaagaagtacgggttaatattgaggatgagggagatgttagaattgcaaagaaacttgcgctggtcggactttggtgtattcagtggaatccg |
9235962 |
T |
|
| Q |
368 |
gtgcatcgaccagccatgaaaacggtggtgcagatgct |
405 |
Q |
| |
|
||| |||| ||| |||||||||| ||||| || ||||| |
|
|
| T |
9235961 |
gtggatcggccatccatgaaaaccgtggtacaaatgct |
9235924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 9069761 - 9069627
Alignment:
| Q |
68 |
atgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaa |
167 |
Q |
| |
|
||||| || ||||||||||| || ||||| |||||||| |||||| | |||||||| ||||| ||||| ||| ||| |||||||||||||| ||||||| |
|
|
| T |
9069761 |
atgacagctgctaggggaaccttgggatatatggcacccgaagtagtgtctcgaaattttggaaatgtttctcttaagtctgatatatacagttatggaa |
9069662 |
T |
|
| Q |
168 |
tgttgctgctggagatggtcggaggaagaaagaat |
202 |
Q |
| |
|
||||| |||| || ||||| ||||||||||||||| |
|
|
| T |
9069661 |
tgttgttgctagaaatggttggaggaagaaagaat |
9069627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 9125237 - 9125095
Alignment:
| Q |
60 |
ttgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacag |
159 |
Q |
| |
|
||||||| |||||||||||||| ||||| || ||||| |||||||||||||| || || ||||| ||||| ||||| ||| ||| |||||||| || || |
|
|
| T |
9125237 |
ttgtatccatgactgcggctagaggaaccttgggatatatggcacctgaagttttgtcacgaaattttggaaatgtttctcgtaagtctgatatttatag |
9125138 |
T |
|
| Q |
160 |
ctatggaatgttgctgctggagatggtcggaggaagaaagaat |
202 |
Q |
| |
|
||||| |||||| ||||||| |||| |||||| | |||||| |
|
|
| T |
9125137 |
ttatgggatgttgttgctggaattggttggaggacgcaagaat |
9125095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 9377984 - 9378114
Alignment:
| Q |
77 |
gctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgc |
176 |
Q |
| |
|
||||| |||||||| || ||||| ||||||||||| || || ||||||| || ||||| ||||| || |||||||| || ||||| ||||| ||| ||| |
|
|
| T |
9377984 |
gctagaggaacattgggctacattgcacctgaagttttctcaagaaacttcggaaatgtttcttacaagtctgatatttatagctacggaatattgttgc |
9378083 |
T |
|
| Q |
177 |
tggagatggtcggaggaagaaagaatactaa |
207 |
Q |
| |
|
| |||||||| ||||| |||||||||||||| |
|
|
| T |
9378084 |
tagagatggttggaggtagaaagaatactaa |
9378114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 363
Target Start/End: Complemental strand, 8861453 - 8861365
Alignment:
| Q |
275 |
ggagatatacatatccctattgatgaagatggagattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggca |
363 |
Q |
| |
|
||||||||| ||||| |||||| || || |||||| ||| ||||||||||||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
8861453 |
ggagatataagtatccatattgaggatgaaggagatcttaaaattgcaaagaaacttgcaattgttggactttggtgcattcaatggca |
8861365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 8979051 - 8978916
Alignment:
| Q |
68 |
atgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaa |
167 |
Q |
| |
|
||||| ||||||||||| || || ||||| |||||||||||||| | || |||| ||||| ||||| ||| |||||||||||| || |||||||||| |
|
|
| T |
8979051 |
atgacagcggctaggggtaccttgggatatatggcacctgaagttctgtcaagaaattttggtaatgtgtctcttaaatctgatatttatagctatggaa |
8978952 |
T |
|
| Q |
168 |
tgttgctgctggagatggtcggaggaagaaagaata |
203 |
Q |
| |
|
||||| |||| || ||||| | |||||| ||||||| |
|
|
| T |
8978951 |
tgttgttgctagaaatggttgcaggaaggaagaata |
8978916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 9086057 - 9085923
Alignment:
| Q |
68 |
atgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaa |
167 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||||| |||||||| || || ||||| ||||||||||| ||| ||| |||||||| || || ||||| | |
|
|
| T |
9086057 |
atgacagctgctaggggaaccttgggatatatggcgcctgaagttttgtcacgaaattttgggaatgtttctcttaagtctgatatttatagttatggga |
9085958 |
T |
|
| Q |
168 |
tgttgctgctggagatggtcggaggaagaaagaat |
202 |
Q |
| |
|
||||| |||| |||||||| || ||||| |||||| |
|
|
| T |
9085957 |
tgttgttgctagagatggttggtggaaggaagaat |
9085923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 9085813 - 9085768
Alignment:
| Q |
318 |
ttgcaaagaaactagcaattgtcggactttggtgcattcagtggca |
363 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9085813 |
ttgcaaagaaactcgcaattgtcggactttggtgcattcagtggca |
9085768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 9437598 - 9437484
Alignment:
| Q |
89 |
ttaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcg |
188 |
Q |
| |
|
||||| ||||| ||||||||||| ||||| | |||||||| ||||| || |||||| |||| ||||| || ||||| ||||| ||||| || ||||| | |
|
|
| T |
9437598 |
ttaggttacattgcacctgaagtgttttcgaggaactttggaaatgtatcgtataaagctgacatatatagttatgggatgttactgcttgaaatggttg |
9437499 |
T |
|
| Q |
189 |
gaggaagaaagaata |
203 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
9437498 |
gaggaagaaaaaata |
9437484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 9069516 - 9069469
Alignment:
| Q |
316 |
aattgcaaagaaactagcaattgtcggactttggtgcattcagtggca |
363 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
9069516 |
aattgcaaggaaacttgcaattgtcggactttggtgtattcagtggca |
9069469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 8861651 - 8861517
Alignment:
| Q |
68 |
atgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaa |
167 |
Q |
| |
|
||||| || |||| |||||| || ||||||||||| |||||||| | || |||| ||||||||||| ||| ||| || ||||| ||||| || |||| |
|
|
| T |
8861651 |
atgacagctgctaagggaaccttgggatacatggcgcctgaagttctatcaagaaattttgggaatgtgtctcttaagtcagatatttacagttacggaa |
8861552 |
T |
|
| Q |
168 |
tgttgctgctggagatggtcggaggaagaaagaat |
202 |
Q |
| |
|
||||| |||| || ||||| ||||| ||||||||| |
|
|
| T |
8861551 |
tgttgttgctagaaatggttggagggagaaagaat |
8861517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 9420515 - 9420401
Alignment:
| Q |
89 |
ttaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcg |
188 |
Q |
| |
|
||||| ||||| ||||||||||| ||||| | |||||||| ||||| || |||||| |||| ||||| || ||||| ||||| || || || ||||| | |
|
|
| T |
9420515 |
ttaggttacattgcacctgaagtgttttcgaggaactttggaaatgtatcgtataaagctgacatatatagttatgggatgttacttcttgaaatggttg |
9420416 |
T |
|
| Q |
189 |
gaggaagaaagaata |
203 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
9420415 |
gaggaagaaaaaata |
9420401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 292 - 405
Target Start/End: Original strand, 9378196 - 9378309
Alignment:
| Q |
292 |
tattgatgaagatggagattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacg |
391 |
Q |
| |
|
|||||| || || |||||| ||||||| ||||||||||| || | |||||||||||||| ||||| ||| || | ||| |||| ||| |||||||||| |
|
|
| T |
9378196 |
tattgaggatgagggagatgttagaatcgcaaagaaacttgcgctggtcggactttggtgtattcaatggaatccggtggatcggccatccatgaaaacc |
9378295 |
T |
|
| Q |
392 |
gtggtgcagatgct |
405 |
Q |
| |
|
||||| || ||||| |
|
|
| T |
9378296 |
gtggtacaaatgct |
9378309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 363
Target Start/End: Complemental strand, 8978874 - 8978786
Alignment:
| Q |
275 |
ggagatatacatatccctattgatgaagatggagattttagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggca |
363 |
Q |
| |
|
||||| |||||||||| ||||| || || | |||| || |||||| || ||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
8978874 |
ggagacatacatatccacattgacgatgagtgtgattataaaattgccaaaaaacttgcaattgttggactttggtgcattcagtggca |
8978786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 9124987 - 9124940
Alignment:
| Q |
316 |
aattgcaaagaaactagcaattgtcggactttggtgcattcagtggca |
363 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| ||||| ||||| |
|
|
| T |
9124987 |
aattgcaaagaaactcgcaattgttggactttggtgtattcaatggca |
9124940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 9495535 - 9495669
Alignment:
| Q |
68 |
atgactgcggctaggggaacattaggatacatggcacctgaagtattttctcgaaactttgggaatgtctcttataaatctgatatatacagctatggaa |
167 |
Q |
| |
|
||||| ||||||||||| || | || ||||| ||||| ||||| || ||| | |||||||| ||||| || || || |||||| | || || | ||||| |
|
|
| T |
9495535 |
atgaccgcggctagggggactattggttacatagcaccagaagttttctctaggaactttggaaatgtgtcgtacaagtctgatgtttatagttttggaa |
9495634 |
T |
|
| Q |
168 |
tgttgctgctggagatggtcggaggaagaaagaat |
202 |
Q |
| |
|
||||| |||| ||||||||||| |||||| ||||| |
|
|
| T |
9495635 |
tgttgttgctagagatggtcgggggaagacagaat |
9495669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 52174459 - 52174523
Alignment:
| Q |
137 |
tcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaa |
201 |
Q |
| |
|
||||| ||||||||||||||||| ||||| |||||| | || || ||| | |||||||||||||| |
|
|
| T |
52174459 |
tcttacaaatctgatatatacagttatggcatgttgattcttgaaatgattggaggaagaaagaa |
52174523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 158; Significance: 9e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 18 - 435
Target Start/End: Original strand, 9171710 - 9172127
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
||||||| ||||| || ||| ||||||| |||||||||| || | |||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
9171710 |
cagacttcggtttggctaagttgtgctcaaaaaatcaaagtactatatcaatgactgcagccagaggaacattaggatacatggcacccgaagttttttc |
9171809 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
| |||| |||||||||||||||||||| ||||||||||| |||||||| |||||||| |||| || || ||||||||||||||||| || ||| |||| |
|
|
| T |
9171810 |
tagaaattttgggaatgtctcttataagtctgatatatatagctatggtatgttgctattggaaattgttggaggaagaaagaatacaaacacaaccaca |
9171909 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| || ||||| || ||||||||||||| |
|
|
| T |
9171910 |
aatgaagaaaattttcaagttctgtatccagattggatccacagtttgcttgaaggaggagaaatacaaatcccaatagatgatgagggagattttagaa |
9172009 |
T |
|
| Q |
318 |
ttgcaaagaaactagcaattgtcggactttggtgcattcagtggcattcagtgcatcgaccagccatgaaaacggtggtgcagatgctacatggagagtt |
417 |
Q |
| |
|
|||| || ||| | ||||| || |||||||||||||| || ||||| | ||||||| || | |||||||| ||| |||| ||||| || ||||| |
|
|
| T |
9172010 |
ttgcgaaaaaattggcaatcgtgggactttggtgcatccaatggcaacctatgcatcgtccgtctatgaaaactgtgatgcaaatgctgcaaggagatgg |
9172109 |
T |
|
| Q |
418 |
agacaagttaaaagttcc |
435 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
9172110 |
agacaagttacaagttcc |
9172127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 18 - 324
Target Start/End: Complemental strand, 15910293 - 15909990
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
|||| |||||||| || ||| |||| || |||||||||| || |||||| ||||||| |||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
15910293 |
cagattttggtttggctaagatgtgttcgaaaaatcaaagtaatgtatccatgactgtagctaagggaacattaggctacatggcacctgaagttttttc |
15910194 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
| |||| ||||| |||||||||||||| || ||||||||||| || || ||||| || |||||||||| ||||||||||||||||| || ||| | |
|
|
| T |
15910193 |
tagaaattttggaaatgtctcttataagtccgatatatacagttacggtatgttattgttggagatggttggaggaagaaagaatacaaaaacaacaagt |
15910094 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
| | | ||||| | |||||| ||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
15910093 |
ggtgatgaaaacatacaagttgagtatccagactggatccacaatttgtttgaa---ggagatatacaaatccctattgatgaagagggagattttagaa |
15909997 |
T |
|
| Q |
318 |
ttgcaaa |
324 |
Q |
| |
|
|| |||| |
|
|
| T |
15909996 |
ttccaaa |
15909990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0690 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: scaffold0690
Description:
Target: scaffold0690; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 18 - 324
Target Start/End: Original strand, 1813 - 2116
Alignment:
| Q |
18 |
cagactttggtttagccaagctgtgctccaaaaatcaaactattgtatcgatgactgcggctaggggaacattaggatacatggcacctgaagtattttc |
117 |
Q |
| |
|
|||| |||||||| || ||| |||| || |||||||||| || |||||| |||||| | |||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
1813 |
cagattttggtttggctaagatgtgttcgaaaaatcaaagtaatgtatccatgactacagctaagggaacattaggctacatggcacctgaagttttttc |
1912 |
T |
|
| Q |
118 |
tcgaaactttgggaatgtctcttataaatctgatatatacagctatggaatgttgctgctggagatggtcggaggaagaaagaatactaagacagtcaca |
217 |
Q |
| |
|
| |||| ||||| |||||||||||||| || ||||||||||| || || ||||| || |||||||||| ||||||||||||||||| || ||| | |
|
|
| T |
1913 |
tagaaattttggaaatgtctcttataagtccgatatatacagttacggtatgttattgttggagatggttggaggaagaaagaatacgaaaacaacaagt |
2012 |
T |
|
| Q |
218 |
gataaagaaaattttcaagttttgtatccagattggatccacggtttgtttgaagggggagatatacatatccctattgatgaagatggagattttagaa |
317 |
Q |
| |
|
| | | ||||| | |||||| ||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
2013 |
ggtgatgaaaacatacaagttgagtatccagactggatccacaatttgtttgaa---ggagatatacaaatccctattgatgaagagagagattttagaa |
2109 |
T |
|
| Q |
318 |
ttgcaaa |
324 |
Q |
| |
|
|| |||| |
|
|
| T |
2110 |
ttccaaa |
2116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 27696535 - 27696586
Alignment:
| Q |
313 |
tagaattgcaaagaaactagcaattgtcggactttggtgcattcagtggcat |
364 |
Q |
| |
|
||||||||||||||| ||| |||| || |||||||||||||||||||||||| |
|
|
| T |
27696535 |
tagaattgcaaagaagctatcaatcgtgggactttggtgcattcagtggcat |
27696586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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