View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_high_97 (Length: 262)
Name: NF1314_high_97
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_high_97 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 35277770 - 35277505
Alignment:
| Q |
1 |
acaacattgcagccataatttcgaccacatttaaaagaaaaggaaaattatgttgtatcaaactccgaaacaatctaatcaaaccttcatgtatataaat |
100 |
Q |
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| T |
35277770 |
acaacattgcagccataatttcgaccacattaaaaagaaaaggaaaattatgttgtatcaaactccgaaacaatctagtcaaaccttcatgtatataaat |
35277671 |
T |
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| Q |
101 |
agtgaaatatatttgaattcaat-------------catttaaaataacccaatgataaaatctactgtttgcaaaaataatgtttatagaccaaacttg |
187 |
Q |
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| T |
35277670 |
agtgaaatatatttgaattcaatttacaaattcaatcatttaaaataacccaatgataaaatctactgtttgcaaaaataatgtttatagaccaaacttg |
35277571 |
T |
|
| Q |
188 |
attgctataactatagaaacaaaaacaaataaaaacatggattagatttaccttattgtcctttgt |
253 |
Q |
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| T |
35277570 |
attgctataactatagaaacaaagacaaataaaaacatggtttagatttaccttattgtcctttgt |
35277505 |
T |
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