View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_110 (Length: 286)
Name: NF1314_low_110
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_110 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 1610998 - 1611168
Alignment:
| Q |
53 |
agaccagttgctcaaagataatatcttgtagcatactagtttcactacatgggggcgaatttcgctcctagtagaactacaagagggaagtttcaacaca |
152 |
Q |
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| T |
1610998 |
agaccagttgctcaaagataatatcttgtagcatactagtttcactacatgggggcgaatttcgctcctagtagaactacaagagggaagtttcaacaca |
1611097 |
T |
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| Q |
153 |
tcattgaaaagattcaaaataggttaagtgggtggaagcatcaatgtcttagcttcgctgatagacttact |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
1611098 |
tcattgaaaagattcaaaataggttaagtgggtggaagcatcaatgtcttagcttcgccgatagacttact |
1611168 |
T |
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