View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1314_low_151 (Length: 251)
Name: NF1314_low_151
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_151 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 32379063 - 32379303
Alignment:
| Q |
1 |
tttaatcactaaggaaataagtaaaaatttacaagcagttttgtagaagtaagattagtagccctacctgctgcactctacatctctagttacctgattt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32379063 |
tttaatcactaaggaaataagtaaaaatttacaagcagttttgtagaagtaagattagtagccctacctgctgcactctacatctctagttacctgattt |
32379162 |
T |
|
| Q |
101 |
aaacgaagactttagttcataccgcaaacagactaatgtatctaaaacatcatcatcaaaagattcagcatcctctattcttgcgatagacatcaaggtc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
32379163 |
aaacgaagactttagttcataccgcaaacagactaatgtatctaaaacatcatcatcaaaagattcaacatcctctattcttgcgatagacatcaaggtc |
32379262 |
T |
|
| Q |
201 |
ttcagccattcttcgtgaagagatgaaaactctgatctctg |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32379263 |
ttcagccattcttcgtgaagagatgaaaactctgatctctg |
32379303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University