View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_159 (Length: 249)
Name: NF1314_low_159
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_159 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 45548718 - 45548494
Alignment:
| Q |
7 |
tcgaataatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt |
106 |
Q |
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| T |
45548718 |
tcgaaaaatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt |
45548619 |
T |
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| Q |
107 |
gaatatgacaaccatactatggaagttttttatg-tatttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt |
205 |
Q |
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| T |
45548618 |
gaatatgacaaccatactatgaaagttttttatgttatttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt |
45548519 |
T |
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| Q |
206 |
tcattagaaagaagagtttcctcct |
230 |
Q |
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| T |
45548518 |
tcattagaaagaagagtttcctcct |
45548494 |
T |
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