View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1314_low_160 (Length: 246)

Name: NF1314_low_160
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1314_low_160
NF1314_low_160
[»] scaffold0433 (1 HSPs)
scaffold0433 (1-127)||(7273-7399)
[»] scaffold0390 (2 HSPs)
scaffold0390 (1-127)||(6849-6975)
scaffold0390 (1-127)||(13865-13991)
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-127)||(2236-2362)
scaffold0234 (1-127)||(11127-11253)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-127)||(18454-18580)
[»] chr8 (32 HSPs)
chr8 (1-127)||(21940831-21940957)
chr8 (1-127)||(24642815-24642941)
chr8 (1-127)||(6094289-6094415)
chr8 (1-127)||(22171653-22171779)
chr8 (1-121)||(38232292-38232412)
chr8 (1-69)||(15326422-15326490)
chr8 (1-69)||(15506791-15506859)
chr8 (17-116)||(14983851-14983950)
chr8 (4-113)||(21969333-21969441)
chr8 (4-113)||(12562123-12562231)
chr8 (4-113)||(22130803-22130911)
chr8 (4-113)||(27007711-27007819)
chr8 (4-113)||(27014854-27014962)
chr8 (4-113)||(27880681-27880789)
chr8 (4-113)||(28020862-28020970)
chr8 (4-121)||(8371447-8371563)
chr8 (4-113)||(21916676-21916784)
chr8 (4-113)||(25611195-25611303)
chr8 (2-125)||(32872757-32872880)
chr8 (4-90)||(2375214-2375300)
chr8 (4-113)||(45534467-45534575)
chr8 (4-121)||(18835342-18835458)
chr8 (16-110)||(29645537-29645631)
chr8 (4-113)||(26240484-26240592)
chr8 (4-118)||(24797306-24797419)
chr8 (4-112)||(22659688-22659795)
chr8 (6-113)||(36970265-36970371)
chr8 (14-66)||(10920427-10920479)
chr8 (39-94)||(24535514-24535569)
chr8 (92-127)||(28555049-28555084)
chr8 (7-45)||(2963133-2963171)
chr8 (13-45)||(6430953-6430985)
[»] chr7 (38 HSPs)
chr7 (1-127)||(15152609-15152735)
chr7 (1-127)||(29327950-29328076)
chr7 (1-127)||(11542895-11543021)
chr7 (4-127)||(18561173-18561296)
chr7 (1-127)||(11535977-11536103)
chr7 (1-132)||(12750987-12751118)
chr7 (1-127)||(12738702-12738828)
chr7 (6-118)||(18257762-18257874)
chr7 (4-117)||(13392326-13392439)
chr7 (4-94)||(10235361-10235451)
chr7 (4-113)||(2204552-2204660)
chr7 (4-113)||(8464999-8465107)
chr7 (4-113)||(18400104-18400212)
chr7 (4-113)||(18407088-18407196)
chr7 (4-113)||(48808690-48808798)
chr7 (4-113)||(19230888-19230996)
chr7 (4-113)||(30254138-30254246)
chr7 (4-112)||(47833875-47833983)
chr7 (72-127)||(15148308-15148363)
chr7 (4-113)||(15729751-15729859)
chr7 (4-113)||(18139532-18139640)
chr7 (13-122)||(19859113-19859221)
chr7 (35-121)||(7396361-7396450)
chr7 (4-113)||(10669096-10669204)
chr7 (4-108)||(7662583-7662686)
chr7 (5-121)||(19388544-19388659)
chr7 (4-46)||(2365169-2365211)
chr7 (4-118)||(3132849-3132962)
chr7 (4-113)||(19393618-19393726)
chr7 (4-113)||(28130561-28130669)
chr7 (24-79)||(29983179-29983234)
chr7 (13-116)||(39111989-39112092)
chr7 (75-117)||(2365070-2365112)
chr7 (6-48)||(7396469-7396511)
chr7 (4-38)||(14591924-14591958)
chr7 (4-38)||(16011515-16011549)
chr7 (1-38)||(34128647-34128684)
chr7 (4-45)||(41681162-41681203)
[»] chr6 (34 HSPs)
chr6 (1-127)||(17684384-17684510)
chr6 (1-127)||(27381167-27381293)
chr6 (1-127)||(27471550-27471676)
chr6 (1-127)||(11651889-11652015)
chr6 (1-127)||(29309056-29309182)
chr6 (1-127)||(29316016-29316142)
chr6 (1-127)||(188892-189018)
chr6 (1-127)||(17691355-17691481)
chr6 (23-127)||(16566257-16566361)
chr6 (4-79)||(16394363-16394438)
chr6 (5-131)||(13359188-13359314)
chr6 (4-110)||(2669476-2669582)
chr6 (4-113)||(16789071-16789179)
chr6 (4-113)||(18020035-18020143)
chr6 (4-113)||(22860082-22860190)
chr6 (4-112)||(27925935-27926042)
chr6 (4-95)||(28172754-28172845)
chr6 (4-112)||(17850413-17850521)
chr6 (10-121)||(20553512-20553622)
chr6 (4-113)||(1586302-1586410)
chr6 (4-113)||(27508541-27508649)
chr6 (4-113)||(27528127-27528235)
chr6 (75-127)||(25537148-25537200)
chr6 (18-113)||(13995151-13995245)
chr6 (4-113)||(14074480-14074588)
chr6 (1-45)||(27296877-27296921)
chr6 (7-113)||(8612915-8613020)
chr6 (1-47)||(25537106-25537152)
chr6 (10-115)||(19218427-19218531)
chr6 (1-43)||(20736520-20736562)
chr6 (4-114)||(22560378-22560487)
chr6 (4-99)||(19347118-19347212)
chr6 (1-38)||(5758672-5758709)
chr6 (77-113)||(20736594-20736630)
[»] chr4 (48 HSPs)
chr4 (1-127)||(18262378-18262504)
chr4 (1-127)||(18269239-18269365)
chr4 (1-127)||(55612849-55612975)
chr4 (1-121)||(10628327-10628447)
chr4 (1-127)||(868763-868889)
chr4 (1-127)||(4426519-4426645)
chr4 (1-127)||(5707486-5707612)
chr4 (1-127)||(5714114-5714240)
chr4 (1-127)||(10621248-10621374)
chr4 (1-127)||(19926675-19926801)
chr4 (1-127)||(26963806-26963932)
chr4 (1-127)||(26970629-26970755)
chr4 (1-127)||(8858333-8858459)
chr4 (1-127)||(28393049-28393175)
chr4 (1-127)||(8845369-8845495)
chr4 (4-127)||(20311458-20311581)
chr4 (4-117)||(56516232-56516345)
chr4 (4-121)||(35223732-35223849)
chr4 (4-117)||(5668045-5668156)
chr4 (4-113)||(2677013-2677121)
chr4 (4-113)||(15461497-15461605)
chr4 (4-113)||(15815021-15815129)
chr4 (4-113)||(17300153-17300261)
chr4 (4-113)||(18111237-18111345)
chr4 (4-113)||(34975551-34975659)
chr4 (4-112)||(5870419-5870526)
chr4 (4-92)||(32646719-32646807)
chr4 (31-109)||(24700213-24700291)
chr4 (4-113)||(3369217-3369325)
chr4 (6-113)||(18163162-18163268)
chr4 (4-113)||(4676177-4676285)
chr4 (4-113)||(20243937-20244045)
chr4 (4-113)||(26531613-26531721)
chr4 (4-57)||(21454057-21454110)
chr4 (6-113)||(1941724-1941830)
chr4 (4-113)||(19365519-19365627)
chr4 (4-113)||(32636484-32636592)
chr4 (69-121)||(10677538-10677590)
chr4 (69-121)||(10891178-10891230)
chr4 (55-125)||(9937933-9938003)
chr4 (8-113)||(4546080-4546184)
chr4 (14-57)||(33888594-33888637)
chr4 (4-38)||(10677500-10677534)
chr4 (4-38)||(10891140-10891174)
chr4 (4-121)||(5616387-5616503)
chr4 (4-45)||(19362477-19362518)
chr4 (77-113)||(11421016-11421052)
chr4 (77-121)||(30040740-30040784)
[»] chr3 (38 HSPs)
chr3 (1-127)||(6110230-6110356)
chr3 (1-127)||(10572507-10572633)
chr3 (1-127)||(10579270-10579396)
chr3 (1-127)||(15600799-15600925)
chr3 (1-127)||(15607344-15607470)
chr3 (1-127)||(16482398-16482524)
chr3 (1-120)||(18522836-18522955)
chr3 (1-127)||(13211468-13211594)
chr3 (1-127)||(18520141-18520267)
chr3 (3-121)||(13248779-13248897)
chr3 (1-127)||(13516977-13517103)
chr3 (1-127)||(17781033-17781159)
chr3 (1-127)||(15342134-15342260)
chr3 (1-112)||(8490676-8490787)
chr3 (1-127)||(15357501-15357627)
chr3 (4-127)||(17200102-17200225)
chr3 (1-127)||(32056814-32056941)
chr3 (4-121)||(1647439-1647556)
chr3 (4-127)||(17136525-17136642)
chr3 (4-127)||(29925137-29925260)
chr3 (4-127)||(29974290-29974413)
chr3 (4-121)||(24253306-24253423)
chr3 (4-96)||(16200627-16200719)
chr3 (4-113)||(14890391-14890499)
chr3 (4-113)||(15846730-15846838)
chr3 (4-113)||(20147748-20147856)
chr3 (4-113)||(21034238-21034346)
chr3 (4-113)||(21398792-21398900)
chr3 (4-113)||(55427021-55427129)
chr3 (4-113)||(12299911-12300018)
chr3 (4-121)||(14147013-14147129)
chr3 (75-127)||(19089734-19089786)
chr3 (28-121)||(9504455-9504548)
chr3 (2-117)||(8251933-8252048)
chr3 (54-127)||(16200291-16200363)
chr3 (7-45)||(11787654-11787692)
chr3 (16-74)||(28953965-28954023)
chr3 (13-110)||(15317376-15317472)
[»] chr1 (30 HSPs)
chr1 (1-127)||(18252196-18252322)
chr1 (1-127)||(18532429-18532555)
chr1 (1-127)||(27131324-27131450)
chr1 (1-127)||(21171148-21171274)
chr1 (1-127)||(27310492-27310618)
chr1 (1-127)||(16358950-16359076)
chr1 (4-121)||(36816551-36816668)
chr1 (4-121)||(3855837-3855954)
chr1 (4-127)||(22657139-22657262)
chr1 (4-121)||(27277475-27277592)
chr1 (6-97)||(23507096-23507187)
chr1 (4-121)||(12014202-12014319)
chr1 (4-120)||(9917837-9917952)
chr1 (4-113)||(9456116-9456224)
chr1 (4-113)||(19706633-19706741)
chr1 (4-113)||(20779839-20779947)
chr1 (4-113)||(22670451-22670559)
chr1 (4-113)||(42817183-42817291)
chr1 (4-113)||(43802559-43802667)
chr1 (1-113)||(28134914-28135025)
chr1 (4-113)||(20391433-20391541)
chr1 (4-113)||(47667668-47667776)
chr1 (8-97)||(12006461-12006550)
chr1 (4-113)||(22612492-22612600)
chr1 (4-87)||(22641791-22641871)
chr1 (4-113)||(35930582-35930690)
chr1 (6-122)||(633925-634040)
chr1 (1-113)||(8727667-8727778)
chr1 (4-38)||(51997353-51997387)
chr1 (4-105)||(26923578-26923678)
[»] chr5 (27 HSPs)
chr5 (1-121)||(24695381-24695501)
chr5 (1-127)||(19714413-19714539)
chr5 (1-127)||(19707133-19707259)
chr5 (4-127)||(39538754-39538877)
chr5 (4-127)||(18569779-18569904)
chr5 (1-121)||(18806949-18807069)
chr5 (4-116)||(22546934-22547046)
chr5 (4-97)||(17285666-17285759)
chr5 (4-97)||(17298817-17298912)
chr5 (4-113)||(31899-32007)
chr5 (4-113)||(20941027-20941135)
chr5 (4-113)||(23545922-23546030)
chr5 (4-113)||(25805579-25805687)
chr5 (33-121)||(27347425-27347513)
chr5 (4-113)||(12789857-12789965)
chr5 (4-113)||(22941250-22941358)
chr5 (4-113)||(24933500-24933608)
chr5 (7-113)||(12765191-12765296)
chr5 (4-113)||(31096816-31096924)
chr5 (1-113)||(26245102-26245213)
chr5 (6-113)||(5097651-5097757)
chr5 (7-113)||(7865631-7865736)
chr5 (7-113)||(9811934-9812039)
chr5 (7-113)||(12704075-12704180)
chr5 (4-111)||(20100437-20100543)
chr5 (4-55)||(18829479-18829530)
chr5 (68-112)||(39535465-39535509)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-127)||(25905-26031)
[»] chr2 (21 HSPs)
chr2 (1-127)||(18796672-18796798)
chr2 (1-127)||(21330163-21330289)
chr2 (4-121)||(18619976-18620093)
chr2 (4-121)||(22183402-22183518)
chr2 (4-112)||(18851977-18852085)
chr2 (4-121)||(19279460-19279577)
chr2 (4-121)||(36270338-36270455)
chr2 (2-127)||(18822249-18822374)
chr2 (4-77)||(20978091-20978164)
chr2 (4-113)||(24250226-24250334)
chr2 (4-113)||(30174377-30174485)
chr2 (1-118)||(6992027-6992146)
chr2 (4-107)||(36801899-36802003)
chr2 (4-113)||(24229409-24229517)
chr2 (4-111)||(28741220-28741326)
chr2 (4-121)||(24763751-24763867)
chr2 (4-112)||(29800468-29800579)
chr2 (77-117)||(12098609-12098649)
chr2 (6-45)||(15342198-15342237)
chr2 (4-42)||(28718968-28719006)
chr2 (77-113)||(19616435-19616471)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-127)||(5695-5821)
[»] scaffold0657 (1 HSPs)
scaffold0657 (2-127)||(1159-1284)
[»] scaffold0039 (1 HSPs)
scaffold0039 (4-121)||(90033-90151)
[»] scaffold0008 (1 HSPs)
scaffold0008 (2-62)||(230307-230367)
[»] scaffold0378 (1 HSPs)
scaffold0378 (4-113)||(8305-8413)
[»] scaffold0264 (1 HSPs)
scaffold0264 (4-113)||(3869-3977)
[»] scaffold0112 (1 HSPs)
scaffold0112 (4-113)||(183-291)
[»] scaffold0028 (1 HSPs)
scaffold0028 (4-113)||(119730-119838)
[»] scaffold0001 (1 HSPs)
scaffold0001 (4-113)||(130418-130526)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-113)||(40182-40290)
[»] scaffold0006 (1 HSPs)
scaffold0006 (4-113)||(67568-67676)
[»] scaffold0466 (1 HSPs)
scaffold0466 (4-113)||(13143-13251)
[»] scaffold0111 (1 HSPs)
scaffold0111 (4-45)||(26609-26650)
[»] scaffold0118 (1 HSPs)
scaffold0118 (4-74)||(45956-46030)
[»] scaffold0393 (1 HSPs)
scaffold0393 (77-121)||(15089-15133)


Alignment Details
Target: scaffold0433 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7399 - 7273
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7399 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 7300  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  7299 acataatagtctctatgctttaatgat 7273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 6849 - 6975
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6849 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 6948  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  6949 acataatagtctctatgctttaatgat 6975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13865 - 13991
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13865 ggatcaatccaatataaatattactcctaatatttatatctttgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 13964  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||| |||||||| |||||    
T  13965 acataatagtctttatgctttaatgat 13991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2236 - 2362
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2236 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 2335  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  2336 acataatagtctctatgctttaatgat 2362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11127 - 11253
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11127 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 11226  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  11227 acataatagtctctatgctttaatgat 11253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18580 - 18454
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18580 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 18481  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  18480 acataatagtctctatgctttaatgat 18454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21940957 - 21940831
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940957 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 21940858  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  21940857 acataatagtctctatgctttaatgat 21940831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24642941 - 24642815
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642941 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 24642842  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||||||| |||| |||||    
T  24642841 acataatagtctctatactttaatgat 24642815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6094415 - 6094289
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  6094415 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcactctaccc 6094316  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    | ||||||||||||||||||| |||||    
T  6094315 atataatagtctctatgctttaatgat 6094289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22171779 - 22171653
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22171779 ggatcaatccaatataaatattactcataatatttatatttatgtgaagacttgataactctttatccatgatctatgagatgtgatcatcagtctacct 22171680  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  22171679 acataatagtctctatgctttaatgat 22171653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38232292 - 38232412
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||| | |||||| | ||||||||| |||||| ||| ||||||||||||||||| |||||||||||| |||||||||||     
T  38232292 ggatcaatccaatataaatattacccataatatgtgtatctatgtcaagactggatcactctttatccatgatccgtgagatgtgattatcagtctaccc 38232391  T
Q  101 acataatagtctctatgcttt 121  Q
    ||| |||||| | ||||||||    
T  38232392 acaaaatagtttttatgcttt 38232412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15326490 - 15326422
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatcca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15326490 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttctcca 15326422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15506859 - 15506791
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatcca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15506859 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttctcca 15506791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 14983851 - 14983950
Alignment:
Q  17 aatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctat 116  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| |||||||| ||||||||||| ||||    
T  14983851 aatattactcctaatatctacatctatgtgaagacttgataacactttttccatgatccgtgagatatgatcattagtctacccacataatagtccctat 14983950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 21969441 - 21969333
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| ||||||  ||||||| | |||||||||||| ||||    
T  21969441 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgatccatgagatgcggtcatcagtctacataca 21969343  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  21969342 taatagtctc 21969333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 12562231 - 12562123
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  12562231 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 12562133  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  12562132 taatagtctc 12562123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 22130803 - 22130911
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  22130803 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 22130901  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  22130902 taatagtctc 22130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27007711 - 27007819
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  27007711 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 27007809  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  27007810 taatagtctc 27007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27014854 - 27014962
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  27014854 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 27014952  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  27014953 taatagtctc 27014962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27880681 - 27880789
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  27880681 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 27880779  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  27880780 taatagtctc 27880789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 28020862 - 28020970
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  28020862 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 28020960  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  28020961 taatagtctc 28020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 8371447 - 8371563
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||| ||||||||||| ||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  8371447 tcaatccaatataaatattactcttaatatttatacctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 8371545  T
Q  104 taatagtctctatgcttt 121  Q
    |||||||||| |||||||    
T  8371546 taatagtctcgatgcttt 8371563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 21916784 - 21916676
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  21916784 tcaatccaatataaatattactcctaatatttatatctatgcatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 21916686  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  21916685 taatagtctc 21916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 25611303 - 25611195
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  |||||||   |||||||||||| ||||    
T  25611303 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcagtcatcagtctacataca 25611205  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  25611204 taatagtctc 25611195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 32872757 - 32872880
Alignment:
Q  2 gatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccta 101  Q
    ||||||| |||||||||||||| | |||||| ||||  | |||| ||||||||||| |||||||| |||||||||||||||  |||| | |||| | |      
T  32872757 gatcaattcaatataaatattattactaatacttatgccgatgtaaagacttgatacctctttattcatgatctgtgagataagatcgtgagtccagccg 32872856  T
Q  102 cataatagtctctatgctttgatg 125  Q
    ||||||||||||||||||||||||    
T  32872857 cataatagtctctatgctttgatg 32872880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 2375300 - 2375214
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcat 90  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||| | |||||||||| |||||||||||  ||| |||||||||||    
T  2375300 tcaatccaatatacatattactcataatatttatatttatgtgaaaatttgataactcattatccatgatacgtgtgatgtgatcat 2375214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 45534467 - 45534575
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  45534467 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 45534565  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  45534566 taatagtctc 45534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 18835458 - 18835342
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| ||||||||||||||||||||||||||  |||||  |||||| ||| |||  |||| |||| |  ||||||||| | |||||||||| ||||    
T  18835458 tcaatccagtataaatattactcctaatatttatacttatgtatagacttaatatctc-atatctatgacccatgagatgtggtaatcagtctacataca 18835360  T
Q  104 taatagtctctatgcttt 121  Q
    |||||||||| |||||||    
T  18835359 taatagtctcgatgcttt 18835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 29645631 - 29645537
Alignment:
Q  16 aaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagt 110  Q
    ||||||||||| |||| ||||||| |||||||||| ||||||| ||||||| ||||| |  ||||||||| |||||||| |||| || |||||||    
T  29645631 aaatattactcttaatgtttatatatatgtgaagagttgataaatctttatgcatgaaccatgagatgtggtcatcagtttacccacgtaatagt 29645537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 26240592 - 26240484
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||  | |||| ||| |||  |||| |||| |  ||||||| | |||||||||| | ||||    
T  26240592 tcaatccaatataaatattactcctaatatttatacctatgtatatacttaatatctc-atatctatgacccatgagatgcggtcatcagtcttcataca 26240494  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  26240493 taatagtctc 26240484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 24797306 - 24797419
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| ||||||| |||||| ||||||||||| ||| |||||||| ||||| | || ||||||||| |  ||||||||  |||||| | |||  |||    
T  24797306 tcaatccagtataaattttactcataatatttatacctacgtgaagacatgatatc-ctatatccatgacccatgagatgtagtcatcaatatactcaca 24797404  T
Q  104 taatagtctctatgc 118  Q
    |||||||||||||||    
T  24797405 taatagtctctatgc 24797419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 22659688 - 22659795
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||| ||||||||||||||||||||| ||||||  |||||| ||| |||  |||| |||| |  |||||||   |||||||||||| ||||    
T  22659688 tcaatccagtatacatattactcctaatatttatacctatgtatagacttaatatctc-atatctatgacccatgagatgcagtcatcagtctacataca 22659786  T
Q  104 taatagtct 112  Q
    |||||||||    
T  22659787 taatagtct 22659795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 36970371 - 36970265
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacata 105  Q
    |||||| |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||| ||||| |||||     
T  36970371 aatccagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcaatctacatacatg 36970273  T
Q  106 atagtctc 113  Q
    ||||||||    
T  36970272 atagtctc 36970265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 10920479 - 10920427
Alignment:
Q  14 ataaatattactcctaatatttatatctatgtgaagacttgataactctttat 66  Q
    ||||||||||||| |||||||||||  |||||||| | |||||||||||||||    
T  10920479 ataaatattactcataatatttatacatatgtgaatatttgataactctttat 10920427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 24535569 - 24535514
Alignment:
Q  39 tctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagt 94  Q
    |||||||||| |||||||||||| |||| ||||||| || |||| |||||||||||    
T  24535569 tctatgtgaaaacttgataactcattattcatgatccgtaagatatgatcatcagt 24535514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 28555084 - 28555049
Alignment:
Q  92 agtctacctacataatagtctctatgctttgatgat 127  Q
    |||||||||||||||||||||||||||||| |||||    
T  28555084 agtctacctacataatagtctctatgctttaatgat 28555049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 2963133 - 2963171
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgt 45  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  2963133 atccagtataaatattactcctaatatttatacctatgt 2963171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 6430985 - 6430953
Alignment:
Q  13 tataaatattactcctaatatttatatctatgt 45  Q
    |||||||||||||||||||||||||| ||||||    
T  6430985 tataaatattactcctaatatttatacctatgt 6430953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15152735 - 15152609
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152735 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 15152636  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  15152635 acataatagtctctatgctttaatgat 15152609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29328076 - 29327950
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29328076 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 29327977  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  29327976 acataatagtctctatgctttaatgat 29327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11542895 - 11543021
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11542895 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagactagataactctttatccatgatctgtgagatgtgatcatcagtctacct 11542994  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  11542995 acataatagtctctatgctttaatgat 11543021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 18561296 - 18561173
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18561296 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacccaca 18561197  T
Q  104 taatagtctctatgctttgatgat 127  Q
    |||||||||||||||||| |||||    
T  18561196 taatagtctctatgctttaatgat 18561173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11535977 - 11536103
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11535977 ggatcaatccaatataaatattactcctaatatttatatctttgtgaagactggataactctttatccatgatctgtgagatgtgatcatcagtctacct 11536076  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  11536077 acataatagtctctatgctttaatgat 11536103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 12751118 - 12750987
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |     
T  12751118 ggatcaatccaatataaatattactcataatatttatatctatgagaagaattgataactctttatccatgatctgtgagatgtgatcatcagtctatcc 12751019  T
Q  101 acataatagtctctatgctttgatgatgtcca 132  Q
    ||||||||||||||||||||| ||||| ||||    
T  12751018 acataatagtctctatgctttaatgatatcca 12750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12738828 - 12738702
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  12738828 ggatcaatccaatataaatattatgagtaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcttcagtctaccc 12738729  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  12738728 acataatagtctctatgctttaatgat 12738702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 18257762 - 18257874
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacata 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||    
T  18257762 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcaatctatccacata 18257861  T
Q  106 atagtctctatgc 118  Q
    ||||||| |||||    
T  18257862 atagtctttatgc 18257874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 13392439 - 13392326
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||| ||||||||||||||  ||||||||||||  |||||||||||||| |||||| ||||||||||||||||  |||||| | |    
T  13392439 tcaatccagtataaatatttctcctaatatttattcctatgtgaagacaggataactctttatctatgatccgtgagatgtgatcatcgatctaccaata 13392340  T
Q  104 taatagtctctatg 117  Q
     |||||||||||||    
T  13392339 caatagtctctatg 13392326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 10235451 - 10235361
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagt 94  Q
    ||||||| |||||||||||| ||||||||||||||  |||| ||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  10235451 tcaatccgatataaatattattcctaatatttatacatatgggaacacctgataactctttatcaatgatctgtgagatgtgatcatcagt 10235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 2204660 - 2204552
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  2204660 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 2204562  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  2204561 taatagtctc 2204552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 8465107 - 8464999
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  8465107 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 8465009  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  8465008 taatagtctc 8464999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 18400212 - 18400104
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  18400212 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 18400114  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  18400113 taatagtctc 18400104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 18407196 - 18407088
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  18407196 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 18407098  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  18407097 taatagtctc 18407088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 48808690 - 48808798
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  48808690 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 48808788  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  48808789 taatagtctc 48808798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 19230996 - 19230888
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  19230996 tcaatccagtataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 19230898  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  19230897 taatagtctc 19230888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 30254246 - 30254138
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  30254246 tcaatccaatacaaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 30254148  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  30254147 taatagtctc 30254138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 47833875 - 47833983
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| |||||||||||||    ||||||||||| ||||||||| ||||| ||||||||||| ||||||| ||||||| |||||| ||| ||||||||     
T  47833875 tcaatcaaatataaatattatgagtaatatttatacctatgtgaaaacttggtaactctttattcatgatcggtgagatctgatcaccagcctacctacg 47833974  T
Q  104 taatagtct 112  Q
    |||||||||    
T  47833975 taatagtct 47833983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 15148363 - 15148308
Alignment:
Q  72 atctgtgagatgtgatcatcagtctacctacataatagtctctatgctttgatgat 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15148363 atctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgat 15148308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 15729859 - 15729751
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  15729859 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 15729761  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  15729760 taatagtctc 15729751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 18139532 - 18139640
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||| ||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  18139532 tcaatccaatacaaatattactcctaatatttatatctatgtatagacctgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 18139630  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  18139631 taatagtctc 18139640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 19859221 - 19859113
Alignment:
Q  13 tataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtct 112  Q
    |||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| |||||||||||||    
T  19859221 tataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacatacataatagtct 19859123  T
Q  113 ctatgctttg 122  Q
    | | ||||||    
T  19859122 cgacgctttg 19859113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 7396450 - 7396361
Alignment:
Q  35 tatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacc---tacataatagtctctatgcttt 121  Q
    ||||| |||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||  |||    |||||||||||||||||||||    
T  7396450 tatatttatgtgaatacttgataattctttattcatgatatgtgagatgtgatcatcagttcaccctgcacataatagtctctatgcttt 7396361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 10669096 - 10669204
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| | |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  10669096 tcaatctagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 10669194  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  10669195 taatagtctc 10669204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 7662583 - 7662686
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| |||| ||||||||||  |||| |||||||||||||||||||||||||| | ||||| ||||||  || |||| ||||||||||| || | |||    
T  7662583 tcaatctaataaaaatattacttataat-tttatatctatgtgaagacttgataagtttttatacatgattcgtaagatatgatcatcagtgtatccaca 7662681  T
Q  104 taata 108  Q
    |||||    
T  7662682 taata 7662686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 19388659 - 19388544
Alignment:
Q  5 caatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacat 104  Q
    ||||||| |||||||||||||||||||||||||| || |||  | |||| ||| |||  ||| ||||| | ||||||| || |||||| ||||  |||||    
T  19388659 caatccagtataaatattactcctaatatttatacctttgtacaaacttaatatctc-atattcatgacccgtgagatatggtcatcaatctatatacat 19388561  T
Q  105 aatagtctctatgcttt 121  Q
    |||| ||||||||||||    
T  19388560 aataatctctatgcttt 19388544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 2365211 - 2365169
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtg 46  Q
    |||||||||| |||||||||||||||||||| |||||||||||    
T  2365211 tcaatccaatgtaaatattactcctaatattgatatctatgtg 2365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 3132962 - 3132849
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||  | ||||| |||||  ||||||||||||||||| ||| |  ||  | |||| |||||||||||||||||||||   |||    
T  3132962 tcaatccaatataaatattaa-cataataattatacatatgtgaagacttgatatctcatattcatttatctatgagatgtgatcatcagtctaatcaca 3132864  T
Q  104 taatagtctctatgc 118  Q
    |  ||||||||||||    
T  3132863 ttgtagtctctatgc 3132849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 19393618 - 19393726
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| | |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||  |||| |  ||| ||||| |||| ||||||| ||||    
T  19393618 tcaatctagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatttatgacccatgaaatgtggtcattagtctacataca 19393716  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  19393717 taatagtctc 19393726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 28130669 - 28130561
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||| ||| |||  |||  |||| |  ||||||| | |||||||||||| | ||    
T  28130669 tcaatccagtataaatattactcctgatatttatacctatgtatagacttaatatctc-atatttatgacccatgagatgcggtcatcagtctacatgca 28130571  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  28130570 taatagtctc 28130561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 29983234 - 29983179
Alignment:
Q  24 ctcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtga 79  Q
    |||||||||||||||  |||||||| | ||| ||||||||||||||||||| ||||    
T  29983234 ctcctaatatttatacatatgtgaaaatttgttaactctttatccatgatccgtga 29983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 39112092 - 39111989
Alignment:
Q  13 tataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtct 112  Q
    |||||||| |||||||||||||||| | ||| ||||||  |  ||||||||||||||||| || || ||| | | ||| ||||||||   ||||||||||    
T  39112092 tataaataatactcctaatatttatgtatatatgaagaaattgtaactctttatccatgacctatgtgatattaccattagtctacccttataatagtct 39111993  T
Q  113 ctat 116  Q
    ||||    
T  39111992 ctat 39111989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 2365112 - 2365070
Alignment:
Q  75 tgtgagatgtgatcatcagtctacctacataatagtctctatg 117  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  2365112 tgtgagatgtgatcatcagtcgacccacatgatagtctctatg 2365070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 7396511 - 7396469
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaa 48  Q
    ||||||||||||||||||| | |||||||||||| ||||||||    
T  7396511 aatccaatataaatattacccataatatttatatttatgtgaa 7396469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 14591958 - 14591924
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttata 38  Q
    |||||||| ||||||||||||||||||||||||||    
T  14591958 tcaatccagtataaatattactcctaatatttata 14591924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 16011549 - 16011515
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttata 38  Q
    |||||||| ||||||||||||||||||||||||||    
T  16011549 tcaatccagtataaatattactcctaatatttata 16011515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34128684 - 34128647
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttata 38  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  34128684 ggatctatccagtataaatattactcctaatatttata 34128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 41681162 - 41681203
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgt 45  Q
    |||||||| |||||||||||||| ||||||||||| ||||||    
T  41681162 tcaatccagtataaatattactcataatatttatacctatgt 41681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17684384 - 17684510
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684384 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 17684483  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  17684484 acataatagtctctatgctttaatgat 17684510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27381167 - 27381293
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381167 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 27381266  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  27381267 acataatagtctctatgctttaatgat 27381293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27471550 - 27471676
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471550 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 27471649  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  27471650 acataatagtctctatgctttaatgat 27471676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 11652015 - 11651889
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11652015 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 11651916  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  11651915 acataatagtctctatgctttaatgat 11651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29309182 - 29309056
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29309182 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatatgtgagatgtgatcatcagtctacct 29309083  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  29309082 acataatagtctctatgctttaatgat 29309056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29316142 - 29316016
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29316142 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatatgtgagatgtgatcatcagtctacct 29316043  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  29316042 acataatagtctctatgctttaatgat 29316016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 188892 - 189018
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  188892 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatatgtgagatgtgatcatcagtctaccc 188991  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  188992 acataatagtctctatgctttaatgat 189018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17691355 - 17691481
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17691355 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatatgtgagatgtgatcatcagtctacct 17691454  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||| |||||||| |||||    
T  17691455 acataatagtctttatgctttaatgat 17691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 16566257 - 16566361
Alignment:
Q  23 actcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16566257 actcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttta 16566356  T
Q  123 atgat 127  Q
    |||||    
T  16566357 atgat 16566361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 16394363 - 16394438
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtga 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  16394363 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactgtttatccatgatatgtga 16394438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 13359188 - 13359314
Alignment:
Q  5 caatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacat 104  Q
    |||| ||||||||||| |||| |||||| ||||||||| ||||||| ||||||||| |||||||||||| || |||||||||||||||||||| | | ||    
T  13359188 caattcaatataaatactacttctaatacttatatctaagtgaagatttgataactttttatccatgatttgcgagatgtgatcatcagtctatccatat 13359287  T
Q  105 aatagtctctatgctttgatgatgtcc 131  Q
    ||||||||||| ||||| ||| |||||    
T  13359288 aatagtctctacgctttaatgttgtcc 13359314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 2669582 - 2669476
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||   |||||||||||||||| |||||| | |    
T  2669582 tcaatcaaatataaatattactcctaatatttatatctatgtgaatacatgataactcttaatcaatgattcatgagatgtgatcatcaatctacccata 2669483  T
Q  104 taatagt 110  Q
    |||||||    
T  2669482 taatagt 2669476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 16789179 - 16789071
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  16789179 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 16789081  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  16789080 taatagtctc 16789071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 18020035 - 18020143
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  18020035 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 18020133  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  18020134 taatagtctc 18020143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 22860082 - 22860190
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  22860082 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 22860180  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  22860181 taatagtctc 22860190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 27926042 - 27925935
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||| |||||||||||||| ||||||| || ||||||||||||| |||| |||| ||||||||||||||| |||||||| |||||||||| || | |||    
T  27926042 tcaattcaatataaatattattcctaat-ttaatatctatgtgaaaacttcataaatctttatccatgatccgtgagatgagatcatcagtttatccaca 27925944  T
Q  104 taatagtct 112  Q
    |||||||||    
T  27925943 taatagtct 27925935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 28172845 - 28172754
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtc 95  Q
    ||||||||||||||| | ||| | |||||||||||||||||| |||||||||||||| |||| | ||||||||| |||||||||||||||||    
T  28172845 tcaatccaatataaacactacccttaatatttatatctatgtaaagacttgataactttttaacaatgatctgtaagatgtgatcatcagtc 28172754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 17850413 - 17850521
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||| ||  |||||||| || || ||||||| | |||| |||||||||||||||| | |    
T  17850413 tcaatccaatatatatattactcataatatttatacctatgtgaatacacgataactcgttgtcaatgatctataagatatgatcatcagtctacccata 17850512  T
Q  104 taatagtct 112  Q
    |||||||||    
T  17850513 taatagtct 17850521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 20553512 - 20553622
Alignment:
Q  10 caatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatag 109  Q
    |||||||||||||| || ||||||| |||||||||||||   ||||||  |||||||| ||||| ||||||||||||||||||||||||| |||||| |     
T  20553512 caatataaatattattcttaatatt-atatctatgtgaatgtttgatatttctttatcgatgatatgtgagatgtgatcatcagtctaccaacataaaaa 20553610  T
Q  110 tctctatgcttt 121  Q
    ||| ||||||||    
T  20553611 tctttatgcttt 20553622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 1586302 - 1586410
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  1586302 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 1586400  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  1586401 taatagtctc 1586410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27508541 - 27508649
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  27508541 tcaatccaatacaaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 27508639  T
Q  104 taatagtctc 113  Q
    ||| ||||||    
T  27508640 taacagtctc 27508649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27528127 - 27528235
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  27528127 tcaatccaatacaaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 27528225  T
Q  104 taatagtctc 113  Q
    ||| ||||||    
T  27528226 taacagtctc 27528235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 25537148 - 25537200
Alignment:
Q  75 tgtgagatgtgatcatcagtctacctacataatagtctctatgctttgatgat 127  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  25537148 tgtgagatgtgatcatcagtctacctacataatagtctttatgctttaatgat 25537200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 13995151 - 13995245
Alignment:
Q  18 atattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctc 113  Q
    ||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||||||||||||    
T  13995151 atattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacatacataatagtctc 13995245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 14074588 - 14074480
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| ||||||||||||||| |||||||||| ||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  14074588 tcaatccattataaatattactcccaatatttatacctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 14074490  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  14074489 taatagtctc 14074480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27296921 - 27296877
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgt 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  27296921 ggatcaatccaatataaatattactcctaatatttatatcaatgt 27296877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 8613020 - 8612915
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataa 106  Q
    ||||| |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| || | |  ||||||| | |||||||||||| |||||||    
T  8613020 atccagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctataacccatgagatgcggtcatcagtctacatacataa 8612922  T
Q  107 tagtctc 113  Q
    |||||||    
T  8612921 tagtctc 8612915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25537106 - 25537152
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtga 47  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  25537106 ggatcaatccaatataaatatgacacctaatatttatatctatgtga 25537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 19218531 - 19218427
Alignment:
Q  10 caatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatag 109  Q
    |||||||||| ||||||||||||||||||  |||||  |||||| ||| ||| | || ||||| |  |||| |||| |||||||||||| ||||||||||    
T  19218531 caatataaattttactcctaatatttatacatatgtatagacttaatatctcat-attcatgacccatgaggtgtggtcatcagtctacatacataatag 19218433  T
Q  110 tctcta 115  Q
    ||||||    
T  19218432 tctcta 19218427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20736520 - 20736562
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctat 43  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  20736520 ggatcaatccagtataaatattactcctaatatttatacctat 20736562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 22560378 - 22560487
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||| || |||||||||||||||||||||||| | ||||||  | |||| ||| |||  ||||||||| |  ||||||||| ||||| |||||| | ||    
T  22560378 tcaatacagtataaatattactcctaatatttaaacctatgtataaacttaatatctc-atatccatgacccatgagatgtggtcatcggtctacatgca 22560476  T
Q  104 taatagtctct 114  Q
    |||||||||||    
T  22560477 taatagtctct 22560487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 19347118 - 19347212
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacc 99  Q
    |||||||| || |||||||| || |||| ||||||  |||||||| || ||| ||||||||||| ||||| |||||||| || |||||| ||||||    
T  19347118 tcaatccattacaaatattattc-taatgtttatacttatgtgaaaacatgacaactctttatcaatgatatgtgagatatggtcatcaatctacc 19347212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5758672 - 5758709
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttata 38  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  5758672 ggatctatccagtataaatattactcctaatatttata 5758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 20736594 - 20736630
Alignment:
Q  77 tgagatgtgatcatcagtctacctacataatagtctc 113  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  20736594 tgagatgtggtcatcagtctacatacataatagtctc 20736630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18262504 - 18262378
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262504 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 18262405  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  18262404 acataatagtctctatgctttaatgat 18262378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18269365 - 18269239
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269365 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 18269266  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  18269265 acataatagtctctatgctttaatgat 18269239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 55612975 - 55612849
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612975 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 55612876  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  55612875 acataatagtctctatgctttaatgat 55612849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10628327 - 10628447
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628327 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 10628426  T
Q  101 acataatagtctctatgcttt 121  Q
    |||||||||||||||||||||    
T  10628427 acataatagtctctatgcttt 10628447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 868889 - 868763
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  868889 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactttttatccatgatctgtgagatgtgatcatcagtctacct 868790  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  868789 acataatagtctctatgctttaatgat 868763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4426519 - 4426645
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4426519 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 4426618  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  4426619 acataatagtctctatgctttaatgat 4426645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5707612 - 5707486
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707612 ggatcaatccaatataaatattactcataatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 5707513  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  5707512 acataatagtctctatgctttaatgat 5707486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5714240 - 5714114
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714240 ggatcaatccaatataaatattactcataatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 5714141  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  5714140 acataatagtctctatgctttaatgat 5714114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10621248 - 10621374
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621248 ggatcaatccaatataaatattactcctaaaatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 10621347  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  10621348 acataatagtctctatgctttaatgat 10621374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19926675 - 19926801
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926675 ggatcaatccaatataaatattactcctaatatttatatctatttgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 19926774  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  19926775 acataatagtctctatgctttaatgat 19926801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26963932 - 26963806
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963932 ggatcaatccaatataaatattactgctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 26963833  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  26963832 acataatagtctctatgctttaatgat 26963806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26970755 - 26970629
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970755 ggatcaatccaatataaatattactgctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 26970656  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  26970655 acataatagtctctatgctttaatgat 26970629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8858459 - 8858333
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  8858459 ggatcaatccaatataaatattactcctaatatttatatctatatgaagacttgataactctttatccatgatctgtgagatgtgatcatcagcctaccc 8858360  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  8858359 acataatagtctctatgctttaatgat 8858333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28393049 - 28393175
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  28393049 ggatcaatccaatataaatattacttctaatatttatatctatgtgaagacttgataactctttatccatgatatgtgagatgtgatcatcagtctaccc 28393148  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  28393149 acataatagtctctatgctttaatgat 28393175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8845495 - 8845369
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| |||||     
T  8845495 ggatcaatccaatataaatattactcctaatatttatatctatataaagaattgataactctttatccatgatctgtgagatgtgatcatcagcctaccc 8845396  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  8845395 acataatagtctctatgctttaatgat 8845369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 20311581 - 20311458
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |||||| |||    
T  20311581 tcaatccaatataaaaattactcctaatatttacatctatgtgaagacttgataactctttatccatgatccatgatatgtgatcatcaatctacccaca 20311482  T
Q  104 taatagtctctatgctttgatgat 127  Q
     ||||||||||||||||| |||||    
T  20311481 aaatagtctctatgctttaatgat 20311458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 56516345 - 56516232
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||    
T  56516345 tcaatccaatataaatattactcatgatatttatacgtatgtgaagacttgataactctttatccattatctgtgagatttgatcattaatctacctaca 56516246  T
Q  104 taatagtctctatg 117  Q
    ||||||||||||||    
T  56516245 taatagtctctatg 56516232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 35223849 - 35223732
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| ||||||||||||||||||||||||||  ||||| ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||| |||    
T  35223849 tcaatccagtataaatattactcctaatatttatacatatgtaaagacatgataactctttatctatgatccgtgagatgtgatcatccgtctacccaca 35223750  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||| ||||||||    
T  35223749 taatagtctatatgcttt 35223732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 5668045 - 5668156
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||  ||||||||||||||| |||||| ||||||  |||||||| ||||| | |||    
T  5668045 tcaatccagtataaatattactcctaatatttatacctacgtgaagatatgataactctttatctatgatccgtgaga--tgatcatcggtctatccaca 5668142  T
Q  104 taatagtctctatg 117  Q
    ||||||||||||||    
T  5668143 taatagtctctatg 5668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 2677121 - 2677013
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  2677121 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 2677023  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  2677022 taatagtctc 2677013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 15461605 - 15461497
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  15461605 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 15461507  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  15461506 taatagtctc 15461497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 15815129 - 15815021
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  15815129 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 15815031  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  15815030 taatagtctc 15815021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 17300153 - 17300261
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  17300153 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 17300251  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  17300252 taatagtctc 17300261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 18111237 - 18111345
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  18111237 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 18111335  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  18111336 taatagtctc 18111345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 34975659 - 34975551
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  34975659 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 34975561  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  34975560 taatagtctc 34975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 5870526 - 5870419
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  5870526 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 5870428  T
Q  104 taatagtct 112  Q
    |||||||||    
T  5870427 taatagtct 5870419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 32646719 - 32646807
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatca 92  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||   ||||||| |||||| |||||||||||||||||    
T  32646719 tcaatccaatgtaaatattattcctaatatttatatctatgtgaagactcgatattcctttatcaatgatccgtgagatgtgatcatca 32646807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 24700291 - 24700213
Alignment:
Q  31 tatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatag 109  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||||||| |||||||||    
T  24700291 tatttatatctatgtgaagacttaatatctctttatccaagatctgtaagatgtgattatcagtctacccacataatag 24700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 3369217 - 3369325
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  3369217 tcaatccaatacaaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 3369315  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  3369316 taatagtctc 3369325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 18163268 - 18163162
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacata 105  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| |||||||||||||| ||||||    
T  18163268 aatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcgatcatcagtctacatacata 18163170  T
Q  106 atagtctc 113  Q
    ||||||||    
T  18163169 atagtctc 18163162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 4676177 - 4676285
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  4676177 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 4676275  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  4676276 taatagtctc 4676285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 20244045 - 20243937
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  20244045 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 20243947  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  20243946 taatagtctc 20243937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 26531721 - 26531613
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||||||||||||||| |||||  || ||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  26531721 tcaatccaatataaatattactcctaatatttatatttatgtatagccttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 26531623  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  26531622 taatagtctc 26531613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 21454057 - 21454110
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgata 57  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  21454057 tcaattcaatataaatattactcctaatatttatatgtatgtgaaaacttgata 21454110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 1941830 - 1941724
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacata 105  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| || | |  ||||||| | |||||||||||  ||||||    
T  1941830 aatccaatataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctataacccatgagatgcggtcatcagtctatatacata 1941732  T
Q  106 atagtctc 113  Q
    ||||||||    
T  1941731 atagtctc 1941724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 19365627 - 19365519
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||||||||||||||||||| ||||||  ||| || ||| |||  ||  ||||| |  ||||||||| |||||||||||| || |    
T  19365627 tcaatccagtataaatattactcctaatatttatacctatgtatagatttaatatctc-atactcatgacccatgagatgtggtcatcagtctacgtata 19365529  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  19365528 taatagtctc 19365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 32636592 - 32636484
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||    ||||| ||| |||  ||| ||||| |  ||||||| | |||||||||||| ||||    
T  32636592 tcaatccaatataaatattactcataatatttatacctatgcatggacttaatatctc-gtattcatgacccatgagatgcggtcatcagtctacataca 32636494  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  32636493 taatagtctc 32636484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 10677538 - 10677590
Alignment:
Q  69 atgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttt 121  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||| ||||    
T  10677538 atgatccgtgagatgtgatcatcagtctacccacataatagtctatatacttt 10677590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 10891178 - 10891230
Alignment:
Q  69 atgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttt 121  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||| ||||    
T  10891178 atgatccgtgagatgtgatcatcagtctacccacataatagtctatatacttt 10891230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 9937933 - 9938003
Alignment:
Q  55 ataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttgatg 125  Q
    |||||||||||| |||||| | |||||||||||||| | |||||| ||| |||||||| ||||||| ||||    
T  9937933 ataactctttattcatgatttatgagatgtgatcatgactctacccacacaatagtctatatgcttcgatg 9938003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 4546184 - 4546080
Alignment:
Q  8 tccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataat 107  Q
    |||| |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| || | |  ||||||| ||| ||||||| || ||||||||    
T  4546184 tccagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctataacccatgagatgcgattatcagtcaacatacataat 4546086  T
Q  108 agtctc 113  Q
    ||||||    
T  4546085 agtctc 4546080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 33888637 - 33888594
Alignment:
Q  14 ataaatattactcctaatatttatatctatgtgaagacttgata 57  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||    
T  33888637 ataaatattacacataatatttatatctatgtgaaaacttgata 33888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 10677500 - 10677534
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttata 38  Q
    |||||||| ||||||||||||||||||||||||||    
T  10677500 tcaatccagtataaatattactcctaatatttata 10677534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 10891140 - 10891174
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttata 38  Q
    |||||||| ||||||||||||||||||||||||||    
T  10891140 tcaatccagtataaatattactcctaatatttata 10891174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 5616503 - 5616387
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| ||||||||||||| |||||||||||| ||| ||  | |||| | | ||| | ||  |||| |  ||||||||| |||||| ||||| ||||    
T  5616503 tcaatccagtataaatattacttctaatatttatacctacgtatatacttaacatctcat-atttatgacccatgagatgtggtcatcaatctacataca 5616405  T
Q  104 taatagtctctatgcttt 121  Q
    |||||||||| |||||||    
T  5616404 taatagtctcaatgcttt 5616387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 19362518 - 19362477
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgt 45  Q
    |||||||| |||||||||||||||||||||| ||| ||||||    
T  19362518 tcaatccagtataaatattactcctaatattaatacctatgt 19362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 11421052 - 11421016
Alignment:
Q  77 tgagatgtgatcatcagtctacctacataatagtctc 113  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  11421052 tgagatgtggtcatcagtctacatacataatagtctc 11421016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 30040740 - 30040784
Alignment:
Q  77 tgagatgtgatcatcagtctacctacataatagtctctatgcttt 121  Q
    ||||||||| |||||||||||  |||||||||||||| |||||||    
T  30040740 tgagatgtggtcatcagtctatatacataatagtctcgatgcttt 30040784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6110356 - 6110230
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110356 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 6110257  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  6110256 acataatagtctctatgctttaatgat 6110230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10572507 - 10572633
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572507 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 10572606  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  10572607 acataatagtctctatgctttaatgat 10572633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10579270 - 10579396
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579270 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 10579369  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  10579370 acataatagtctctatgctttaatgat 10579396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15600799 - 15600925
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600799 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 15600898  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  15600899 acataatagtctctatgctttaatgat 15600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15607344 - 15607470
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607344 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 15607443  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  15607444 acataatagtctctatgctttaatgat 15607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16482398 - 16482524
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482398 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 16482497  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  16482498 acataatagtctctatgctttaatgat 16482524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18522955 - 18522836
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522955 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 18522856  T
Q  101 acataatagtctctatgctt 120  Q
    ||||||||||||||||||||    
T  18522855 acataatagtctctatgctt 18522836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13211594 - 13211468
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13211594 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagttgtgatcatcagtctacct 13211495  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  13211494 acataatagtctctatgctttaatgat 13211468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18520267 - 18520141
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520267 ggatcaatcaaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 18520168  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  18520167 acataatagtctctatgctttaatgat 18520141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 13248897 - 13248779
Alignment:
Q  3 atcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctac 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13248897 atcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagttgtgatcatcagtctacctac 13248798  T
Q  103 ataatagtctctatgcttt 121  Q
    |||||||||||||||||||    
T  13248797 ataatagtctctatgcttt 13248779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13517103 - 13516977
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13517103 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 13517004  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||||| |||||| |||||    
T  13517003 acataatagtctctgtgctttaatgat 13516977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17781033 - 17781159
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17781033 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatctatgatttgtgagatgtgatcatcagtctacct 17781132  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  17781133 acataatagtctctatgctttaatgat 17781159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15342134 - 15342260
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15342134 ggatcaatccaatataaatattactcctaatttttatatctatgtgaagactagataactctttatccatgatctgtgagatgtgatcatcagtctacct 15342233  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||| ||| |||||    
T  15342234 acataatagtctctatgttttaatgat 15342260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8490787 - 8490676
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490787 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 8490688  T
Q  101 acataatagtct 112  Q
    ||||||| ||||    
T  8490687 acataatcgtct 8490676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15357501 - 15357627
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15357501 ggatcaacccaatataaatattactcctaatttttatatctatgtgaagactagataactctttatccatgatctgtgagatgtgatcatcagtctacct 15357600  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||| ||| |||||    
T  15357601 acataatagtctctatgttttaatgat 15357627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 17200102 - 17200225
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  17200102 tcaatccaatacaaatactactcctaatatttatatctatgtgaagacttgataactctttatccacgatctgtgagatgtgatcatcagtctacccaca 17200201  T
Q  104 taatagtctctatgctttgatgat 127  Q
    |||||||||||||||||| |||||    
T  17200202 taatagtctctatgctttaatgat 17200225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32056814 - 32056941
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatattt-atatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacc 99  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32056814 ggatcaatccaatataaatattactcataatattttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcattagtctacc 32056913  T
Q  100 tacataatagtctctatgctttgatgat 127  Q
     ||||||||||||||||||||| |||||    
T  32056914 cacataatagtctctatgctttaatgat 32056941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 1647439 - 1647556
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  1647439 tcaatcaaatataaacattactcctaatatttatatctatgtgtagacttgataactctttatccatgatctgtgagatgtgatcatcagtctatccaca 1647538  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||||||||||||    
T  1647539 taatagtctctatgcttt 1647556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 17136642 - 17136525
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  17136642 tcaatccaatataaatattactcctaatat------ctatgtgaagacttgataactctttatccatgatctgtgaaatgtgatcatcagtctacccaca 17136549  T
Q  104 taatagtctctatgctttgatgat 127  Q
    |||||||||||||| ||| |||||    
T  17136548 taatagtctctatgttttaatgat 17136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 29925260 - 29925137
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||  |||| | |||    
T  29925260 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttaatgactctttatccatgatctatgagatgtgatcatcgatctatccaca 29925161  T
Q  104 taatagtctctatgctttgatgat 127  Q
    |||||| ||| ||||||| |||||    
T  29925160 taatagcctccatgctttaatgat 29925137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 29974413 - 29974290
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||  |||| | |||    
T  29974413 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttaatgactctttatccatgatctatgagatgtgatcatcgatctatccaca 29974314  T
Q  104 taatagtctctatgctttgatgat 127  Q
    |||||| ||| ||||||| |||||    
T  29974313 taatagcctccatgctttaatgat 29974290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 24253306 - 24253423
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||| ||||||||||||| |||| |||| ||||||  |||||||| ||||||||||||||||||||| ||  ||||||| ||||||| |||||||| |||    
T  24253306 tcaaaccaatataaatataactcttaatgtttataagtatgtgaaaacttgataactctttatccataattcgtgagatatgatcattagtctaccgaca 24253405  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||||||||||||    
T  24253406 taatagtctctatgcttt 24253423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 16200719 - 16200627
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtct 96  Q
    |||||||||||| |||||||| |||||||||| ||||||| |||| ||||||||| |||||||||||||||||| |||| |||||||||||||    
T  16200719 tcaatccaatatgaatattacacctaatatttgtatctatatgaatacttgataattctttatccatgatctgtaagatatgatcatcagtct 16200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 14890499 - 14890391
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  14890499 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 14890401  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  14890400 taatagtctc 14890391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 15846730 - 15846838
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  15846730 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 15846828  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  15846829 taatagtctc 15846838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 20147748 - 20147856
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  20147748 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 20147846  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  20147847 taatagtctc 20147856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 21034346 - 21034238
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  21034346 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 21034248  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  21034247 taatagtctc 21034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 21398900 - 21398792
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||  |||| |||| |  ||||||| | |||| ||||||| ||||    
T  21398900 tcaatccaatataaatattactcctaatatttatacctatgtatagacttgatatctc-atatctatgacccatgagatgaggtcataagtctacataca 21398802  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  21398801 taatagtctc 21398792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 55427129 - 55427021
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  55427129 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 55427031  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  55427030 taatagtctc 55427021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 12300018 - 12299911
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||| |||||||||||||   |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  12300018 tcaatccaatataaatattactcctaacatttatatctatg-atagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 12299921  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  12299920 taatagtctc 12299911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 14147129 - 14147013
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||| |||||||||||||||  |||||  |||||| ||| ||| | |||||||| |  ||||||||| |||||||||||| || |    
T  14147129 tcaatccagtataaatattcctcctaatatttatacatatgtatagacttaatatctcat-atccatgacccatgagatgtggtcatcagtctacatata 14147031  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||||| ||||||    
T  14147030 taatagtctctgtgcttt 14147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 19089734 - 19089786
Alignment:
Q  75 tgtgagatgtgatcatcagtctacctacataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  19089734 tgtgagatgtgatcatcagtctacctacataatagtctctatgatttaatgat 19089786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 9504548 - 9504455
Alignment:
Q  28 taatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttt 121  Q
    |||||||| ||| ||||| || |||||||||||| |||||||||| | |||||||  ||| ||||||||||| |||||||||| ||||| ||||    
T  9504548 taatatttttatgtatgttaatacttgataactccttatccatgacccgtgagataagattatcagtctacccacataatagtttctatccttt 9504455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 8251933 - 8252048
Alignment:
Q  2 gatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccta 101  Q
    |||||||| ||||||||||||||||  ||||| || || ||||| |||| ||||||||  ||||| ||||||| || |||||||||| |||||| | | |    
T  8251933 gatcaatcaaatataaatattactcgaaatatgtaaatttatgtaaagatttgataacattttattcatgatccgtaagatgtgatcttcagtccatcca 8252032  T
Q  102 cataatagtctctatg 117  Q
    ||| ||||||| ||||    
T  8252033 catgatagtctatatg 8252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 16200363 - 16200291
Alignment:
Q  54 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttgatgat 127  Q
    |||||||||||||||||||||||| |||| |||||||||||||  | ||| ||||||||| ||||||| |||||    
T  16200363 gataactctttatccatgatctgtaagatatgatcatcagtctctccaca-aatagtctccatgctttaatgat 16200291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 11787692 - 11787654
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgt 45  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  11787692 atccagtataaatattactcctaatatttatacctatgt 11787654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 28954023 - 28953965
Alignment:
Q  16 aaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatc 74  Q
    |||||||||||||||| | ||||  |||||||||||||  |||||||||||| ||||||    
T  28954023 aaatattactcctaatgtgtatacatatgtgaagactttgtaactctttatcaatgatc 28953965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 15317376 - 15317472
Alignment:
Q  13 tataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagt 110  Q
    |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| || | |  ||||||| | |||||| ||||| |||||||||||    
T  15317376 tataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctataacccatgagatgcggtcatcaatctacatacataatagt 15317472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18252322 - 18252196
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252322 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 18252223  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  18252222 acataatagtctctatgctttaatgat 18252196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18532429 - 18532555
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18532429 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctatct 18532528  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  18532529 acataatagtctctatgctttaatgat 18532555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27131324 - 27131450
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131324 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 27131423  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||| |||||||| |||||    
T  27131424 acataatagtctttatgctttaatgat 27131450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21171148 - 21171274
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  21171148 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgttatcatcagtctaccc 21171247  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||| |||||||| |||||    
T  21171248 acataatagtctttatgctttaatgat 21171274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27310492 - 27310618
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  27310492 ggatcaatccaatataaatattactcctaatatttatatttatgtgaagacttgataactctttatccataatctgtgagatgtgatcatcagtctaccc 27310591  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  27310592 acataatagtctctatgctttaatgat 27310618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16358950 - 16359076
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||     
T  16358950 ggatcaatccaatataaatattactcataatatttatatctatgtgaaggcttgataactctttatccattatctgtgagatgtgatcatcagtctaccc 16359049  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  16359050 acataatagtctctatgctttaatgat 16359076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 36816551 - 36816668
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  36816551 tcaatccaatataaatattactcctaatatttatatctatgtgtagacttgataactctttatccatgatctgtgagatgtgatcatcagtctatccaca 36816650  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||||||||||||    
T  36816651 taatagtctctatgcttt 36816668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 3855837 - 3855954
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||     
T  3855837 tcaatccaatataaatattactcctaatatttatacctatgtgaagactttataactctttatccatgatttgtgagatgtgatcatcagtctacccacg 3855936  T
Q  104 taatagtctctatgcttt 121  Q
    |||||||||| |||||||    
T  3855937 taatagtctccatgcttt 3855954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 22657139 - 22657262
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||| | |||    
T  22657139 tcaatctaatataaatattactcataatatttatatctatgtgaagacttaataactctttatctatgagctatgagatgtgatcatcagtctatccaca 22657238  T
Q  104 taatagtctctatgctttgatgat 127  Q
    | |||||||||||||||| |||||    
T  22657239 tgatagtctctatgctttaatgat 22657262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 27277475 - 27277592
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| | |||||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||||| |||||||||||||||| ||||||| |||    
T  27277475 tcaatctagtataaatattactcctaatatttatacctatgtgaaaacatgataactctttatctatgatccgtgagatgtgatcatcggtctacccaca 27277574  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||||||||||||    
T  27277575 taatagtctctatgcttt 27277592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 23507187 - 23507096
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtcta 97  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  23507187 aatccaatataaatattactcctattatttatatctatgtgaaaacttgataactccttatccatgatccgtgagatgtgatcatcagtcta 23507096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 12014202 - 12014319
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||| |||    
T  12014202 tcaatccaatattaatattactcttaatatttatatttatgtgaagacttgataactccttatcaatgatccgtgagatgtgatcatcattctacccaca 12014301  T
Q  104 taatagtctctatgcttt 121  Q
    |||| |||| || |||||    
T  12014302 taatggtctttacgcttt 12014319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 9917837 - 9917952
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||  ||||| |||    
T  9917837 tcaatccaatataaatattactca-aatatttatatctatgtgaagacttgataactctttatccatgatccacgagatgtgatcatcaacctaccgaca 9917935  T
Q  104 taatagtctctatgctt 120  Q
    || || |||||||||||    
T  9917936 tagtattctctatgctt 9917952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 9456224 - 9456116
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  9456224 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 9456126  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  9456125 taatagtctc 9456116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 19706633 - 19706741
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  19706633 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 19706731  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  19706732 taatagtctc 19706741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 20779839 - 20779947
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  20779839 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 20779937  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  20779938 taatagtctc 20779947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 22670451 - 22670559
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  22670451 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 22670549  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  22670550 taatagtctc 22670559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 42817183 - 42817291
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  42817183 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 42817281  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  42817282 taatagtctc 42817291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 43802559 - 43802667
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  43802559 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 43802657  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  43802658 taatagtctc 43802667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28134914 - 28135025
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| |    
T  28134914 ggatcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacat 28135012  T
Q  101 acataatagtctc 113  Q
    ||||||| |||||    
T  28135013 acataattgtctc 28135025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 20391433 - 20391541
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  20391433 tcaatccaatataaatattactcctaacatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 20391531  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  20391532 taatagtctc 20391541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 47667668 - 47667776
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  47667668 tcaatccaatataaatattactcataatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 47667766  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  47667767 taatagtctc 47667776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 12006461 - 12006550
Alignment:
Q  8 tccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtcta 97  Q
    |||| |||||||||||||| |||||||||||||| || ||| |||||||||||| ||||| |||||  || || ||||||||||||||||    
T  12006461 tccagtataaatattactcttaatatttatatctgtgcgaacacttgataactccttatcaatgattcgtaagttgtgatcatcagtcta 12006550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 22612600 - 22612492
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||| |||||||||||| |||||||||||||||||  ||||||||||  ||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  22612600 tcaatccaataaaaatattactcccaatatttatatctatgtatagacttgatatatc-atatctatgacccatgagatgcggtcatcagtctacataca 22612502  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  22612501 taatagtctc 22612492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 22641791 - 22641871
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgat 87  Q
    |||||| | ||||||||||| |||||||   |||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  22641791 tcaatctagtataaatattattcctaat---tatatctatgtgaacacttaataactctttatccatgatctatgagatgtgat 22641871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 35930690 - 35930582
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||  ||||    
T  35930690 tcaatccaatataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctatataca 35930592  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  35930591 taatagtctc 35930582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 634040 - 633925
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacata 105  Q
    |||||| |||||||||||||||||||||||||| ||||||  |||||| ||| |||  || | |||| |  ||||||| | |||||||||||| ||||||    
T  634040 aatccagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atagctatgacccatgagatgcggtcatcagtctacatacata 633942  T
Q  106 atagtctctatgctttg 122  Q
    |||||||| | ||||||    
T  633941 atagtctcgacgctttg 633925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8727778 - 8727667
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||| ||||||||||||| ||||||||||||  |||||  |||||| ||| |||  |||  |||| |  ||||||||  |||||||||||| |    
T  8727778 ggatcaatccagtataaatattacttctaatatttatacttatgtatagacttaatatctc-atatatatgacccatgagatgtagtcatcagtctacat 8727680  T
Q  101 acataatagtctc 113  Q
    | |||||||||||    
T  8727679 agataatagtctc 8727667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 51997387 - 51997353
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttata 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  51997387 tcaatctaatataaatattactcctaatatttata 51997353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 26923578 - 26923678
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||| || |||||||||||||||||||||| ||| | ||||  |||||| ||| |||  |||| |||| |  ||||||||| |||||||||||| ||||    
T  26923578 tcaattcagtataaatattactcctaatattcataccaatgtatagacttaatatctc-atatctatgacccatgagatgtggtcatcagtctacataca 26923676  T
Q  104 ta 105  Q
    ||    
T  26923677 ta 26923678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24695381 - 24695501
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695381 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 24695480  T
Q  101 acataatagtctctatgcttt 121  Q
    |||||||||||||||||||||    
T  24695481 acataatagtctctatgcttt 24695501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19714413 - 19714539
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19714413 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 19714512  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  19714513 acataatagtctctatgctttaatgat 19714539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19707133 - 19707259
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  19707133 ggatcaatccaatataaatattactcctagtatttatatctatgtgaagatttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 19707232  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  19707233 acataatagtctctatgctttaatgat 19707259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 39538877 - 39538754
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||    
T  39538877 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgaaatatgaccatcagtctacccaca 39538778  T
Q  104 taatagtctctatgctttgatgat 127  Q
    |||||||||  ||||||| |||||    
T  39538777 taatagtcttcatgctttaatgat 39538754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 18569779 - 18569904
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctt--tatccatgatctgtgagatgtgatcatcagtctaccta 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||| |    
T  18569779 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgatatctctttatatccatgatatgtgagatgtgatcatcagtctaccaa 18569878  T
Q  102 cataatagtctctatgctttgatgat 127  Q
    ||||||||||| |||||||| |||||    
T  18569879 cataatagtctttatgctttaatgat 18569904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18806949 - 18807069
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||     
T  18806949 ggatcaatccaatataaacattacttctaatatttatatctatgtgaagacttgataactctttatccatgatatatgaaatgtgatcatcagtctaccc 18807048  T
Q  101 acataatagtctctatgcttt 121  Q
     ||||||||||||||||||||    
T  18807049 gcataatagtctctatgcttt 18807069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 22546934 - 22547046
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||| | |||    
T  22546934 tcaatccaatataaatattactcataatatttatatctatatgaaaacttgataactctttatccatgatttgtgagatgtgatcatcggtctatccaca 22547033  T
Q  104 taatagtctctat 116  Q
    |||||||||||||    
T  22547034 taatagtctctat 22547046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 17285666 - 17285759
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtcta 97  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  17285666 tcaatccaatataaatattactcttaatatttatatctatgtaaagacttgataactctttatccatgacctgtgatatgtgatcatcagtcta 17285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 17298817 - 17298912
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgaga--tgtgatcatcagtcta 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| | |||| |  ||||||||||||||||    
T  17298817 tcaatccaatataaatattactcttaatatttatatctatgtgaagatttaataactctttatccatgacccgtgatatgtgtgatcatcagtcta 17298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 32007 - 31899
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  32007 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 31909  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  31908 taatagtctc 31899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 20941135 - 20941027
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  20941135 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 20941037  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  20941036 taatagtctc 20941027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 23546030 - 23545922
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  23546030 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 23545932  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  23545931 taatagtctc 23545922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 25805579 - 25805687
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  25805579 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 25805677  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  25805678 taatagtctc 25805687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 27347425 - 27347513
Alignment:
Q  33 tttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttt 121  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||| | ||| |||||||||||||||||    
T  27347425 tttatacctatgtgaagacatgataactctttatctatgatctgtgagatgtgatcatcggcctatccacaaaatagtctctatgcttt 27347513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 12789857 - 12789965
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  12789857 tcaatccaatataaatattacttctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 12789955  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  12789956 taatagtctc 12789965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 22941358 - 22941250
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||  |||| |||| |  ||||||  | |||||||||||| ||||    
T  22941358 tcaatccaatataaatattactcctaatatttatatctatgtataaacttgatatctc-atatctatgacccatgagatacggtcatcagtctacataca 22941260  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  22941259 taatagtctc 22941250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 24933500 - 24933608
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  24933500 tcaatccaatataaatattacttctaatatttatatctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 24933598  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  24933599 taatagtctc 24933608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 12765191 - 12765296
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataa 106  Q
    ||||||||||||||||||||||||||||||||  |||||  |||||| ||| |||  |||| || | |  ||||||||| |||||||||||| |||||||    
T  12765191 atccaatataaatattactcctaatatttatacatatgtatagacttaatatctc-atatctataacccatgagatgtggtcatcagtctacatacataa 12765289  T
Q  107 tagtctc 113  Q
    |||||||    
T  12765290 tagtctc 12765296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 31096924 - 31096816
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||  ||||||| ||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  31096924 tcaatccaatataaatattactcctataatttatacctatgtatagacttaatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 31096826  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  31096825 taatagtctc 31096816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26245213 - 26245102
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||  | |||| ||| |||  |||| |||| |  |||||||  ||||||||||||| |    
T  26245213 ggatcaatcaagtataaatattactcctaatatttatacctatgtataaacttaatatctc-atatctatgacccatgagatgcaatcatcagtctacat 26245115  T
Q  101 acataatagtctc 113  Q
    |||||||||||||    
T  26245114 acataatagtctc 26245102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 5097757 - 5097651
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacata 105  Q
    ||||||||||||||||||||| |||||||||||  |||||  |||||| ||| |||  |||| |||| |  ||||||||  |||||||||||| ||||||    
T  5097757 aatccaatataaatattactcataatatttatacttatgtatagacttaatatctc-atatctatgacccatgagatgtagtcatcagtctacatacata 5097659  T
Q  106 atagtctc 113  Q
    ||||||||    
T  5097658 atagtctc 5097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 7865631 - 7865736
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataa 106  Q
    ||||| |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| || | |  ||||||| | |||||||||||| |||||||    
T  7865631 atccagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctataacccatgagatgcggtcatcagtctacatacataa 7865729  T
Q  107 tagtctc 113  Q
    |||||||    
T  7865730 tagtctc 7865736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 9811934 - 9812039
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataa 106  Q
    ||||||||||||||||||||||||||||||||  |||||  |||||| ||| |||  |||| || | |  ||||||||| |||||||||||| ||||||     
T  9811934 atccaatataaatattactcctaatatttatacatatgtatagacttaatatctc-atatctataacccatgagatgtggtcatcagtctacatacatag 9812032  T
Q  107 tagtctc 113  Q
    |||||||    
T  9812033 tagtctc 9812039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 12704075 - 12704180
Alignment:
Q  7 atccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctacataa 106  Q
    ||||||||||||||||||||||||||||||||  |||||  |||||| ||| |||  |||| || | |  ||||||||| |||||||||||| ||||||     
T  12704075 atccaatataaatattactcctaatatttatacatatgtatagacttaatatctc-atatctataacccatgagatgtggtcatcagtctacatacatag 12704173  T
Q  107 tagtctc 113  Q
    |||||||    
T  12704174 tagtctc 12704180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 20100437 - 20100543
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||| ||| ||||| |||||||||||||||| ||| |||| |  |||||| ||| ||| | || ||||| |  |||||||||||||||||||||| ||||    
T  20100437 tcaagccagtataagtattactcctaatattgatacctatctatagacttaatatctcat-attcatgacccatgagatgtgatcatcagtctacataca 20100535  T
Q  104 taatagtc 111  Q
    ||||||||    
T  20100536 taatagtc 20100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18829479 - 18829530
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttga 55  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||| ||||||    
T  18829479 tcaatccaatataaatattggtcctaatatttatatatatgagaacacttga 18829530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 39535509 - 39535465
Alignment:
Q  68 catgatctgtgagatgtgatcatcagtctacctacataatagtct 112  Q
    ||||| || ||||||||| |||||||||||| |||||||||||||    
T  39535509 catgacctatgagatgtggtcatcagtctacatacataatagtct 39535465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25905 - 26031
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25905 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagtcttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 26004  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||| ||||||||| |||||    
T  26005 acataatagtcgctatgctttaatgat 26031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18796798 - 18796672
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18796798 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccc 18796699  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||| ||||||| |||||    
T  18796698 acataatagtctcaatgctttaatgat 18796672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21330163 - 21330289
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21330163 ggatcaatccaatataaatattactcataatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtccacct 21330262  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    ||||||||||||||||||||| |||||    
T  21330263 acataatagtctctatgctttaatgat 21330289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 18620093 - 18619976
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||| | ||||| |||    
T  18620093 tcaatctagtataaatattactcctaatatttatacctatgtgaagacatgataactctttatctatgatccgtgagatgtgatcatcggcctacccaca 18619994  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||| ||||||||    
T  18619993 taatagtctatatgcttt 18619976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 22183402 - 22183518
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||| |||||| ||     
T  22183402 tcaatccaatataa-tattactcttaatatttatatctatgtgaagacttgataactccttatcaaagatctgtgagatttgatcatcaatctacccacg 22183500  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||||||| ||||    
T  22183501 taatagtctctatacttt 22183518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 18851977 - 18852085
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| |||    
T  18851977 tcaatccaatataaatattactcttaatatttatacatatttgaagacttgataactctttattcatgatccgtgagatgggatcattagtctaccgaca 18852076  T
Q  104 taatagtct 112  Q
    |||||||||    
T  18852077 taatagtct 18852085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 19279577 - 19279460
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||| ||||||||||||  ||||||||||||||| |||| ||   ||    
T  19279577 tcaatccaatataaatattactccaaatatctatatctatctgaaaacttgataactttttatccatgatacgtgagatgtgatcattagtcaactcgca 19279478  T
Q  104 taatagtctctatgcttt 121  Q
    ||||||||| ||||||||    
T  19279477 taatagtctttatgcttt 19279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 36270455 - 36270338
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| || ||||   |||||||||||||||||||||||| |||    
T  36270455 tcaatccaatataaatattactcctaatatttaaatcgaagtgaaaacttgataactctttctctatgactcgtgagatgtgatcatcagtctacccaca 36270356  T
Q  104 taatagtctctatgcttt 121  Q
     |||||||| ||| ||||    
T  36270355 caatagtctttatacttt 36270338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 18822374 - 18822249
Alignment:
Q  2 gatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccta 101  Q
    |||||||||||||||||||||||   ||||||||||||||||||||| | |||||||||| ||||| |||||| |||| |||||||||||||||||   |    
T  18822374 gatcaatccaatataaatattaccattaatatttatatctatgtgaaaagttgataactccttatcaatgatccgtgatatgtgatcatcagtctattga 18822275  T
Q  102 cataatagtctctatgctttgatgat 127  Q
    ||||||| ||| | |||||| |||||    
T  18822274 cataataatctatctgctttaatgat 18822249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 20978164 - 20978091
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgt 77  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  20978164 tcaatccaatataaatattactcataataattatatctcggtgaagacttgataactctttatccatgatctgt 20978091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 24250226 - 24250334
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  24250226 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 24250324  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  24250325 taatagtctc 24250334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 30174485 - 30174377
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  30174485 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 30174387  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  30174386 taatagtctc 30174377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 6992027 - 6992146
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaag--acttgataactctttatccatgatctgtgagatgtgatcatcagtctac 98  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||| |||||||  || ||||||||||| ||||||| |||||||    
T  6992027 ggatcaatccaatataaatattactcctgagatttatacctatgtgaagatacttgataaatctttatttataatctgtgagatatgatcattagtctac 6992126  T
Q  99 ctacataatagtctctatgc 118  Q
    | | |||||| ||| |||||    
T  6992127 ccatataataatctttatgc 6992146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 36801899 - 36802003
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatct-atgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctac 102  Q
    ||||| ||||||||||||||| | |||||||||||| | ||| |||||||||||||||| ||||| ||||| |||||| |||||||||||||||||  ||    
T  36801899 tcaattcaatataaatattacccttaatatttatattttatgcgaagacttgataactcattatcaatgatttgtgaggtgtgatcatcagtctactcac 36801998  T
Q  103 ataat 107  Q
    |||||    
T  36801999 ataat 36802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 24229409 - 24229517
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  24229409 tcaatccagtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctatgaaccatgagatgcggtcatcagtctacataca 24229507  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  24229508 taatagtctc 24229517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 28741220 - 28741326
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||  |||||||||||||||||||||||||| ||||||  | |||| ||| ||| | || |||||    |||||||||||||||||||||| ||||    
T  28741220 tcaatccggtataaatattactcctaatatttatacctatgtacatacttaatatctcat-attcatgacgcatgagatgtgatcatcagtctacataca 28741318  T
Q  104 taatagtc 111  Q
    ||||||||    
T  28741319 taatagtc 28741326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 24763751 - 24763867
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||| |||||||||||||| ||||||||||| ||||||  |||| | ||| |||  | || |||| |  ||||| ||| |||||||||||| || |    
T  24763751 tcaatccagtataaatattactcataatatttatacctatgtatagacgtaatatctc-atgtctatgacccatgagacgtggtcatcagtctacataaa 24763849  T
Q  104 taatagtctctatgcttt 121  Q
    |||||||||| |||||||    
T  24763850 taatagtctcgatgcttt 24763867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 29800579 - 29800468
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactcttt---atccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||| |||||||||||||||||||||||||| | ||||  | |||| || | | | |   |||||||| |  || ||||||||||||||||||| |    
T  29800579 tcaatccagtataaatattactcctaatatttatacccatgtatatacttaattaatatctcacatccatgacccatgggatgtgatcatcagtctacat 29800480  T
Q  101 acataatagtct 112  Q
    ||||||||||||    
T  29800479 acataatagtct 29800468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 12098609 - 12098649
Alignment:
Q  77 tgagatgtgatcatcagtctacctacataatagtctctatg 117  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  12098609 tgagatctgatcatcagtctacatacataatagtctctatg 12098649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 15342198 - 15342237
Alignment:
Q  6 aatccaatataaatattactcctaatatttatatctatgt 45  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  15342198 aatccagtataaatattactcctaatatttatacctatgt 15342237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 28718968 - 28719006
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatcta 42  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  28718968 tcaatcaagtataaatattactcctaatatttatatcta 28719006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 19616471 - 19616435
Alignment:
Q  77 tgagatgtgatcatcagtctacctacataatagtctc 113  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  19616471 tgagatgtggtcatcagtctacatacataatagtctc 19616435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5821 - 5695
Alignment:
Q  1 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  5821 ggatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgacctgtgagatgtgatcatcagtctaccc 5722  T
Q  101 acataatagtctctatgctttgatgat 127  Q
    |||||||||||| |||||||| |||||    
T  5721 acataatagtctttatgctttaatgat 5695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 1284 - 1159
Alignment:
Q  2 gatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctaccta 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1284 gatcaatccaatataaatattactcttaatatttatatctatggcaagacttgataactttttatccatgatctgtgagatgtgatcatcagtctaccta 1185  T
Q  102 cataatagtctctatgctttgatgat 127  Q
    |||||||||||||||||||| |||||    
T  1184 cataatagtctctatgctttaatgat 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 90033 - 90151
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactc-tttatccatgatctgtgagatgtgatcatcagtctacctac 102  Q
    |||||||||||||||| |||  | ||||||||||||||||||||||  |||||||||| |||| |||||||| |||||||||||| ||||||||| ||||    
T  90033 tcaatccaatataaatgttatacgtaatatttatatctatgtgaagtgttgataactcttttacccatgatccgtgagatgtgattatcagtctatctac 90132  T
Q  103 ataatagtctctatgcttt 121  Q
    ||| |||||| ||||||||    
T  90133 atagtagtctttatgcttt 90151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 230307 - 230367
Alignment:
Q  2 gatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactct 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  230307 gatcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactct 230367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 8413 - 8305
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  8413 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 8315  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  8314 taatagtctc 8305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 3869 - 3977
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  3869 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 3967  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  3968 taatagtctc 3977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 291 - 183
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||||| ||||||||| || ||||    
T  291 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgtggtcatcagtcgacataca 193  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  192 taatagtctc 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 119838 - 119730
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  119838 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacgtaca 119740  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  119739 taatagtctc 119730  T

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Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 130418 - 130526
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||| |||| |  ||||||| | |||||||||||| ||||    
T  130418 tcaatccaatataaatattactcctaatatttatatctatgtatagacttgatatctc-atatctatgacccatgagatgcggtcatcagtctacataca 130516  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  130517 taatagtctc 130526  T

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Target: scaffold0031 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 40182 - 40290
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||  |||||||||||||||||||||||||| ||||||  |||||| ||| |||  ||||||||| |  |||||||||  ||||||||||| ||||    
T  40182 tcaatccggtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatccatgacccatgagatgtggccatcagtctacataca 40280  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  40281 taatagtctc 40290  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 67568 - 67676
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||| || | |  ||||||| | |||||||||||  ||||    
T  67568 tcaatccaatataaatattactcctaatatttatacctatgtatagacttaatatctc-atatctataacccatgagatgcggtcatcagtctatataca 67666  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  67667 taatagtctc 67676  T

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Target: scaffold0466 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 13143 - 13251
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgtgaagacttgataactctttatccatgatctgtgagatgtgatcatcagtctacctaca 103  Q
    |||||||  |||||||||||||||||||||||||| ||||||  |||||| ||| |||  |||  |||| |  ||||||||| ||||| |||||| ||||    
T  13143 tcaatccggtataaatattactcctaatatttatacctatgtatagacttaatatctc-atatatatgacccatgagatgtggtcatcggtctacataca 13241  T
Q  104 taatagtctc 113  Q
    ||||||||||    
T  13242 taatagtctc 13251  T

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Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 26650 - 26609
Alignment:
Q  4 tcaatccaatataaatattactcctaatatttatatctatgt 45  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  26650 tcaatccagtataaatattactcctaatatttatacctatgt 26609  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 46030 - 45956
Alignment:
Q  4 tcaatccaatataaatattactcctaatat----ttatatctatgtgaagacttgataactctttatccatgatc 74  Q
    ||||| ||||||||||||||||| ||||||    |||||||||| |||| | |||| |||| |||||||||||||    
T  46030 tcaattcaatataaatattactcataatatatatttatatctatatgaatatttgacaactttttatccatgatc 45956  T

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Target: scaffold0393 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 15089 - 15133
Alignment:
Q  77 tgagatgtgatcatcagtctacctacataatagtctctatgcttt 121  Q
    ||||||| | |||||||||||| |||||||||||||| |||||||    
T  15089 tgagatgcggtcatcagtctacatacataatagtctcgatgcttt 15133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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