View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1314_low_23 (Length: 485)

Name: NF1314_low_23
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1314_low_23
NF1314_low_23
[»] chr3 (17 HSPs)
chr3 (30-477)||(21730591-21731039)
chr3 (334-477)||(37054387-37054532)
chr3 (377-477)||(7976585-7976686)
chr3 (338-477)||(47767429-47767570)
chr3 (337-477)||(53470363-53470505)
chr3 (382-466)||(47284148-47284233)
chr3 (378-477)||(2104772-2104872)
chr3 (378-477)||(38506810-38506910)
chr3 (341-477)||(7302346-7302484)
chr3 (338-403)||(46429492-46429558)
chr3 (341-477)||(53129777-53129915)
chr3 (337-466)||(30767100-30767232)
chr3 (389-475)||(31021728-31021816)
chr3 (339-476)||(31189332-31189471)
chr3 (390-466)||(6837004-6837081)
chr3 (436-477)||(26547112-26547153)
chr3 (436-477)||(35279856-35279897)
[»] chr1 (23 HSPs)
chr1 (341-477)||(31166310-31166448)
chr1 (378-477)||(48953607-48953706)
chr1 (378-477)||(44571239-44571339)
chr1 (341-477)||(8224768-8224906)
chr1 (341-477)||(39887127-39887265)
chr1 (378-477)||(41822478-41822578)
chr1 (381-476)||(50471791-50471887)
chr1 (378-477)||(52135560-52135660)
chr1 (343-477)||(28632521-28632656)
chr1 (377-477)||(37447837-37447938)
chr1 (378-477)||(41822632-41822733)
chr1 (382-477)||(13181630-13181726)
chr1 (378-477)||(41823095-41823195)
chr1 (378-476)||(42230758-42230858)
chr1 (378-477)||(49216273-49216373)
chr1 (377-466)||(6470632-6470722)
chr1 (381-466)||(35491198-35491284)
chr1 (380-477)||(946415-946512)
chr1 (378-466)||(37447305-37447394)
chr1 (408-477)||(47820282-47820351)
chr1 (377-477)||(41481360-41481461)
chr1 (378-465)||(32128068-32128156)
chr1 (437-473)||(37448341-37448377)
[»] chr2 (22 HSPs)
chr2 (372-477)||(11036374-11036480)
chr2 (378-476)||(41585626-41585725)
chr2 (378-477)||(8736376-8736476)
chr2 (377-477)||(7167602-7167703)
chr2 (377-477)||(30698318-30698419)
chr2 (380-477)||(39630265-39630362)
chr2 (378-477)||(21504488-21504588)
chr2 (339-477)||(45094406-45094546)
chr2 (375-477)||(44255669-44255772)
chr2 (372-477)||(740736-740842)
chr2 (337-477)||(1583744-1583886)
chr2 (377-477)||(7227947-7228048)
chr2 (378-466)||(32840138-32840227)
chr2 (409-477)||(14306742-14306810)
chr2 (341-466)||(17905654-17905780)
chr2 (378-476)||(20935744-20935843)
chr2 (341-477)||(769036-769174)
chr2 (341-477)||(11141305-11141443)
chr2 (341-477)||(33189192-33189330)
chr2 (382-466)||(1730095-1730179)
chr2 (436-477)||(6749254-6749295)
chr2 (436-477)||(28740693-28740734)
[»] chr5 (23 HSPs)
chr5 (378-477)||(17542293-17542393)
chr5 (338-477)||(22303802-22303943)
chr5 (378-477)||(33146211-33146311)
chr5 (377-466)||(32250041-32250131)
chr5 (339-462)||(22766950-22767075)
chr5 (367-450)||(11601066-11601150)
chr5 (377-476)||(35111263-35111363)
chr5 (367-432)||(8255054-8255119)
chr5 (378-466)||(15270797-15270886)
chr5 (425-466)||(28489549-28489590)
chr5 (378-466)||(37241053-37241142)
chr5 (389-476)||(10314698-10314786)
chr5 (339-477)||(35379342-35379480)
chr5 (384-466)||(31316205-31316288)
chr5 (377-466)||(14834861-14834951)
chr5 (435-477)||(40089749-40089791)
chr5 (341-477)||(41762147-41762285)
chr5 (381-477)||(12479948-12480045)
chr5 (377-477)||(30519041-30519141)
chr5 (377-477)||(30559381-30559481)
chr5 (436-477)||(37241530-37241571)
chr5 (377-466)||(22302558-22302649)
chr5 (379-462)||(28490031-28490115)
[»] scaffold0318 (1 HSPs)
scaffold0318 (337-477)||(2863-3004)
[»] chr7 (23 HSPs)
chr7 (378-477)||(14790151-14790251)
chr7 (341-477)||(25189147-25189285)
chr7 (378-466)||(32650611-32650700)
chr7 (377-477)||(3905580-3905681)
chr7 (377-477)||(30524292-30524393)
chr7 (378-477)||(13814915-13815015)
chr7 (338-477)||(23455168-23455309)
chr7 (337-476)||(28539090-28539231)
chr7 (389-477)||(40495279-40495368)
chr7 (378-477)||(40495755-40495855)
chr7 (378-477)||(40667379-40667479)
chr7 (378-477)||(45984378-45984478)
chr7 (378-477)||(45988738-45988838)
chr7 (369-475)||(15990920-15991027)
chr7 (377-477)||(22391509-22391609)
chr7 (377-477)||(36328717-36328820)
chr7 (408-477)||(41443021-41443090)
chr7 (378-477)||(26415991-26416091)
chr7 (341-477)||(39342563-39342701)
chr7 (377-462)||(43791127-43791213)
chr7 (339-403)||(29065915-29065980)
chr7 (408-477)||(45967016-45967085)
chr7 (436-476)||(30080723-30080763)
[»] chr4 (22 HSPs)
chr4 (378-477)||(53760725-53760825)
chr4 (377-477)||(29091174-29091275)
chr4 (369-476)||(41139502-41139610)
chr4 (378-465)||(4490070-4490153)
chr4 (378-475)||(56339171-56339269)
chr4 (378-466)||(40338198-40338287)
chr4 (421-477)||(17727010-17727066)
chr4 (371-466)||(19461682-19461778)
chr4 (338-477)||(2125854-2125995)
chr4 (420-477)||(24705432-24705489)
chr4 (378-466)||(42775643-42775732)
chr4 (377-477)||(46242479-46242580)
chr4 (377-476)||(26534530-26534630)
chr4 (390-477)||(27284597-27284685)
chr4 (378-462)||(46243047-46243130)
chr4 (378-476)||(17727103-17727202)
chr4 (338-426)||(15660255-15660345)
chr4 (380-477)||(35470162-35470260)
chr4 (369-477)||(10354371-10354480)
chr4 (408-477)||(13318594-13318663)
chr4 (436-477)||(42776734-42776775)
chr4 (378-466)||(52294991-52295080)
[»] scaffold0169 (1 HSPs)
scaffold0169 (377-476)||(4112-4212)
[»] chr8 (20 HSPs)
chr8 (339-477)||(24044958-24045098)
chr8 (378-477)||(34008819-34008919)
chr8 (335-466)||(33985998-33986131)
chr8 (369-477)||(35404687-35404796)
chr8 (371-466)||(31976538-31976634)
chr8 (393-477)||(34388561-34388645)
chr8 (337-465)||(28324619-28324749)
chr8 (377-477)||(8049291-8049392)
chr8 (378-466)||(26520395-26520484)
chr8 (420-476)||(24510223-24510279)
chr8 (383-477)||(6416227-6416322)
chr8 (367-477)||(9982663-9982774)
chr8 (337-477)||(29257296-29257438)
chr8 (341-477)||(14239-14376)
chr8 (380-477)||(29482752-29482850)
chr8 (372-477)||(31980428-31980534)
chr8 (341-477)||(33377242-33377380)
chr8 (377-477)||(13144620-13144721)
chr8 (378-454)||(29611408-29611485)
chr8 (339-466)||(44889352-44889481)
[»] chr6 (7 HSPs)
chr6 (379-466)||(31412940-31413028)
chr6 (408-477)||(15616296-15616365)
chr6 (379-477)||(9697501-9697600)
chr6 (341-466)||(28918165-28918292)
chr6 (408-466)||(1368546-1368604)
chr6 (378-477)||(1195371-1195471)
chr6 (437-477)||(26901699-26901739)
[»] scaffold0400 (1 HSPs)
scaffold0400 (342-477)||(4433-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (342-477)||(5077-5214)
[»] scaffold0129 (2 HSPs)
scaffold0129 (377-469)||(19235-19327)
scaffold0129 (436-477)||(19720-19761)
[»] scaffold0047 (1 HSPs)
scaffold0047 (389-466)||(50253-50331)
[»] scaffold0014 (1 HSPs)
scaffold0014 (372-477)||(221131-221237)
[»] scaffold0337 (1 HSPs)
scaffold0337 (436-477)||(16309-16350)


Alignment Details
Target: chr3 (Bit Score: 370; Significance: 0; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 30 - 477
Target Start/End: Original strand, 21730591 - 21731039
Alignment:
Q  30 ctagctagctaatctaggttattaacaaagctataatgtta-tttatatataatggagttttattagactttagggttttgttgcaagttgcaatattat 128  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21730591 ctagctacctaatctaggttattaacaa-gctataatgttaatttatatataatggagttttattagactttagggttttgttgcaagttgcaatattat 21730689  T
Q  129 tttacattgcttcacttggttttaggtgtgttacttgtaatatttttatacttagcttcacttggttttaggtgtgtcatgtgaatttactcgataggtc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21730690 tttacattgcttcacttggttttaggtgtgttacttgtaatatttttatacttagcttcacttggttttaggtgtgtcatgtgaatttactcgataggtc 21730789  T
Q  229 acgagataggtttacacaatgagatgttgaccacaataaaacaaactttaaactggcatggttgctaataaacaaaaattgttccactgactttgccaaa 328  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21730790 acgagataggtttatacaatgagatgttgaccacaataaaacaaactttaaactggcatgtttgctaataaacaaaaattgttccactgactttgccaaa 21730889  T
Q  329 tgcatgaatcttagagtgtgtttggacgagggaatgt-ctaaggtaatttaatgttttgaaggaattcaaatatttgaaatgaattttattctttgaata 427  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  21730890 tgcatgaatctaagagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaatatttgagatgaatttcattgtttgaata 21730989  T
Q  428 ataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||  ||| |||||||||||||||||||||||||||||||| ||||||    
T  21730990 ataatttaaacaatttttaaaatgatggaaatttatgaactattttgttc 21731039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 334 - 477
Target Start/End: Original strand, 37054387 - 37054532
Alignment:
Q  334 gaatcttagagtgtgtttggacgagggaatgtct-aaggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataa 431  Q
    ||||||||||||||||||||| | |||||||| | |||| ||| ||||||||||||||||||||||||  ||||  ||||||| ||| ||||  |||||     
T  37054387 gaatcttagagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatag 37054486  T
Q  432 tacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |   ||||||||| ||||||||||||||||||||| ||| ||||||    
T  37054487 tttgaagaattttcaaaatgatggaaatttatgaagtattttgttc 37054532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 7976585 - 7976686
Alignment:
Q  377 taatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||||||||| |||||  ||||  |||||| |||| |||| ||||||||  |||||||||||||||||||||||||||||||| ||| ||||    
T  7976585 taatgttttgaaggaatttaaatacattgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgt 7976684  T
Q  476 tc 477  Q
    ||    
T  7976685 tc 7976686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 477
Target Start/End: Original strand, 47767429 - 47767570
Alignment:
Q  338 cttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataataca 435  Q
    ||||||||||||||||| | |||||||| |  ||| ||| ||||||||||||||||||||||||  ||||  ||||||  ||| |||| |||||| |       
T  47767429 cttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttggataatagtttg 47767528  T
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  47767529 aagaattttcaaaatgatggaaatttatgaagtattttgttc 47767570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 53470505 - 53470363
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatac 434  Q
    |||||||||||||||||| |||| ||||| |  ||| ||| || |||||||| |||||||||||| ||||   ||||||| ||| |||| ||||||||      
T  53470505 tcttagagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtgaatttcattgtttggataataattt 53470406  T
Q  435 aaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  53470405 gaagcattttcaaaatgatggaaatttatgaagtattttgttc 53470363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 47284233 - 47284148
Alignment:
Q  382 ttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||| |||||||||||| ||||| |||||||  ||| |||||||||||||   ||||||||| |||||||||||||||||||||    
T  47284233 ttttgagggaattcaaatactttgatatgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaa 47284148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 2104772 - 2104872
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    ||||||| || |||||||||||| |||||  |||||| |||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| |||||    
T  2104772 aatgtttcgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 2104871  T
Q  477 c 477  Q
    |    
T  2104872 c 2104872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 38506910 - 38506810
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||||||||||||   ||||||||| |||||||||||||||||| || ||| |||||    
T  38506910 aatgttttgagggaattcaaataatttgaggtgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttataaagtattttgtt 38506811  T
Q  477 c 477  Q
    |    
T  38506810 c 38506810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 7302346 - 7302484
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| |||||||||| |  ||  ||| |||||||||||||||||||| |||  ||||  ||||||  ||| |||| |||||| |   |||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtgaattccattgtttggataatagtttgaag 7302445  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||||||||||||||||||||| ||| ||||||    
T  7302446 aattttcaaaatgatggaaatttatgaagtattttgttc 7302484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 46429558 - 46429492
Alignment:
Q  338 cttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatattt 403  Q
    ||||||||||||||||| |||||||| | |  ||||||| ||||||||||||||||||||| |||||    
T  46429558 cttagagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattt 46429492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 477
Target Start/End: Complemental strand, 53129915 - 53129777
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| |||||||||| |  ||| ||| ||||||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 53129816  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||| ||||||||||| ||| ||||||    
T  53129815 tattttcaaaatgatgaaaatttatgaagtattttgttc 53129777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 466
Target Start/End: Original strand, 30767100 - 30767232
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatatttgaaa--tgaattttattctttgaataataata 433  Q
    ||||||||||| |||||| | || ||||| |  ||| ||| ||||||| |||||||||||||||| || |||  ||||||  ||| ||||  |||||||     
T  30767100 tcttagagtgtatttggatggggtaatgttttgagggaatctaatgttatgaaggaattcaaatacttaaaaggtgaattccattgtttgggtaataatt 30767199  T
Q  434 caaagaatttttaaaatgatggaaatttatgaa 466  Q
      ||||||||| |||||||||||||||||||||    
T  30767200 tgaagaattttcaaaatgatggaaatttatgaa 30767232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 475
Target Start/End: Original strand, 31021728 - 31021816
Alignment:
Q  389 ggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaattttt-aaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||| |||||  |||||| |||| |||| ||||||||   |||||||||| ||||||||||||||||||||| ||| ||||    
T  31021728 ggaattcaaatactttgatgtgaattctattgtttgcataataatttgaagaatttttcaaaatgatggaaatttatgaagtattttgt 31021816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 476
Target Start/End: Complemental strand, 31189471 - 31189332
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaa 436  Q
    |||||||||||||| | ||| |||||| |  ||||||| |||||||||||  ||||||||||| |||||  | ||||||||  ||||  | |||||  ||    
T  31189471 ttagagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggtaaattttatcgtttgggtgataatttaa 31189372  T
Q  437 agaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    | ||||||||| |||||||||| ||||||| ||| |||||    
T  31189371 ataatttttaagatgatggaaacttatgaagtattttgtt 31189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 6837081 - 6837004
Alignment:
Q  390 gaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||||| |||||  |||| || ||| |||||||||||||   ||||||||| |||||||| ||||||||||||    
T  6837081 gaattcaaatagtttgagttgaaattcattgtttgaataataatttgaagaattttcaaaatgatagaaatttatgaa 6837004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Original strand, 26547112 - 26547153
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  26547112 aagaattttcaaaatgatggaaatttatgaagtattttgttc 26547153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 35279897 - 35279856
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  35279897 aagaattttcaaaatgatggaaatttatgaagtattttgttc 35279856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 31166310 - 31166448
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| |||||||||| |  || |||| ||||||||||| ||||| ||||||||| || ||||||| |||| |||||||||||||   |||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgagatgaattctattgtttgaataataatttgaag 31166409  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||||||||||||||||||||| ||| ||||||    
T  31166410 aattttcaaaatgatggaaatttatgaagtattttgttc 31166448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 48953607 - 48953706
Alignment:
Q  378 aatgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||||||||||||||||||||||  |||||| |||| |||| ||||||||   ||||||||| ||||||||||| ||||||||| ||| ||||||    
T  48953607 aatgttttgaaggaattcaaatatttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatggatatttatgaagtattttgttc 48953706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 44571239 - 44571339
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||| ||||||  ||| |||| ||||||||  ||||||||||||||||||||||||||||| || ||| |||||    
T  44571239 aatgttttgagggaattcaaatactttgaagtgaattccattgtttggataataatttaaagaatttttaaaatgatggaaatttataaagtattttgtt 44571338  T
Q  477 c 477  Q
    |    
T  44571339 c 44571339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 8224768 - 8224906
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| |||||||||| |  ||| ||| ||||||||||| |||||| ||||| |||||  ||||||  ||| |||| || |||||  ||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattccattgtttggatgataatttaaag 8224867  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||||||||||||||||||||| ||| ||||||    
T  8224868 aattttcaaaatgatggaaatttatgaagtattttgttc 8224906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 39887127 - 39887265
Alignment:
Q  341 agagtgtgtttggacgagggaatgtct-aaggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    ||||||||||| || |||||||||| | |||| ||| | ||||||||||| |||||||||| |||||  ||||||  ||| |||| ||||||||   |||    
T  39887127 agagtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaattccattgtttggataataatttgaag 39887226  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||||||||||||||||||||| ||| ||||||    
T  39887227 aattttcaaaatgatggaaatttatgaagtattttgttc 39887265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 41822578 - 41822478
Alignment:
Q  378 aatgttttgaaggaattcaaatatttgaa-atgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| || || |||||||  ||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| |||||    
T  41822578 aatgttttgagggaattcaaatactttaagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 41822479  T
Q  477 c 477  Q
    |    
T  41822478 c 41822478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 50471791 - 50471887
Alignment:
Q  381 gttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    ||||||| |||||||||||| ||| |  ||||||||||| |||| ||||||||  |||||||||| |||||||||||||||| |||| ||| |||||    
T  50471791 gttttgagggaattcaaatactttcaggtgaattttattgtttggataataatttaaagaattttcaaaatgatggaaatttttgaagtattttgtt 50471887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 52135660 - 52135560
Alignment:
Q  378 aatgttttgaaggaattcaaatatttgaaa-tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||||||  |  | ||||||||| |||| || |||||   ||||||||||||||||||||||||||||||| ||| |||||    
T  52135660 aatgttttgagggaattcaaatatttttaggtaaattttattgtttggatgataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 52135561  T
Q  477 c 477  Q
    |    
T  52135560 c 52135560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 28632656 - 28632521
Alignment:
Q  343 agtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataatacaaagaat 441  Q
    |||||||||||| |||||||||| |  ||| ||| |||||||||||  ||||||||   |||||  ||||||  ||| |||| ||||||||  |||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaatactttgaggtgaattccattgtttggataataatttaaagaat 28632557  T
Q  442 ttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||| ||||||||| ||||||||||| ||| ||||||    
T  28632556 tttcaaaatgatgaaaatttatgaagtattttgttc 28632521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 37447938 - 37447837
Alignment:
Q  377 taatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||||||||||||||||  ||||  ||||||  ||| |||| |||||| |   ||||||||| ||||||||||||||||||||| ||| ||||    
T  37447938 taatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgt 37447839  T
Q  476 tc 477  Q
    ||    
T  37447838 tc 37447837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 41822733 - 41822632
Alignment:
Q  378 aatgttttgaaggaatt-caaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||| |||||| |||||| ||||| |||||||  ||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| ||||    
T  41822733 aatgttttgagggaatttcaaatactttgagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 41822634  T
Q  476 tc 477  Q
    ||    
T  41822633 tc 41822632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 13181630 - 13181726
Alignment:
Q  382 ttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| |||||||||||| ||||| || |||| |||| |||| ||||||||   |||||| || ||||||||||||||||||||| ||| ||||||    
T  13181630 ttttgagggaattcaaatactttgagattaattatattttttggataataatttgaagaatattcaaaatgatggaaatttatgaagtattttgttc 13181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 41823195 - 41823095
Alignment:
Q  378 aatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||||||||||||||||  |||| |||||||  ||| |||| |||||| |   ||||||||| ||||| ||||||||||||||| ||| |||||    
T  41823195 aatgttttgaaggaattcaaataccttgagatgaattccattgtttggataatagtttgaagaattttcaaaataatggaaatttatgaagtattttgtt 41823096  T
Q  477 c 477  Q
    |    
T  41823095 c 41823095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 476
Target Start/End: Original strand, 42230758 - 42230858
Alignment:
Q  378 aatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataataca-aagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||| | |||| |||||||| ||| ||||||| ||| |||| ||||||||    ||||||||||||||||||||||||||||||| ||| ||||    
T  42230758 aatgttttgaggtaatttaaatattttgaagtgaatttcattgtttggataataattttgaagaatttttaaaatgatggaaatttatgaagtatcttgt 42230857  T
Q  476 t 476  Q
    |    
T  42230858 t 42230858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 49216373 - 49216273
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    ||||||| || |||||||||||| |||||  | ||||| ||| || | ||||||||  |||||||||| ||||||||||||||||||||| ||| |||||    
T  49216373 aatgtttcgagggaattcaaatactttgaggtaaatttcattgttgggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 49216274  T
Q  477 c 477  Q
    |    
T  49216273 c 49216273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 6470722 - 6470632
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||||| |||||||||||  |||||  || |||  ||| |||||||||||||   ||||||||| |||||||||||||||||||||    
T  6470722 taatgttttgagggaattcaaattctttgaggtggattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaa 6470632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 35491198 - 35491284
Alignment:
Q  381 gttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||  ||||| |||||||| || |||||||| ||| |||| ||||||||   ||||||||| |||||||||||||||||||||    
T  35491198 gttttgagagaatttaaatattttgatatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 35491284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 477
Target Start/End: Original strand, 946415 - 946512
Alignment:
Q  380 tgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| |||||| ||||| ||   ||||||| |||| |||| ||||||||   ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  946415 tgttttgagggaatttaaatactttggatgaattctattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttc 946512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 37447394 - 37447305
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||||  ||||||||||| |||||  ||||||  ||| |||| ||||||||   ||||||||| |||||||||||||||||||||    
T  37447394 aatgttttgagagaattcaaatactttgatgtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 37447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 47820282 - 47820351
Alignment:
Q  408 tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||| ||| |||| ||||||||   ||| ||||||||||||||||||||||||||| ||| ||||||    
T  47820282 tgaatttcattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgttc 47820351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 41481461 - 41481360
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||||| |||||||||| ||| | || ||||||||| ||||||  |||||  | || | ||| ||||||||| ||||||||||| ||| ||||    
T  41481461 taatgttttgaagaaattcaaatacttttagatcaattttattgtttgaaagataatttagaggaatttgaaaatgatgtaaatttatgaagtattttgt 41481362  T
Q  476 tc 477  Q
    ||    
T  41481361 tc 41481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 465
Target Start/End: Original strand, 32128068 - 32128156
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatga 465  Q
    |||||||||| |||||||||||| ||||   ||||||  ||| ||| |||||||||   ||||||||| |||||||||| |||||||||    
T  32128068 aatgttttgagggaattcaaatactttgtggtgaattccattgttttaataataatttgaagaattttcaaaatgatgggaatttatga 32128156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 473
Target Start/End: Complemental strand, 37448377 - 37448341
Alignment:
Q  437 agaatttttaaaatgatggaaatttatgaactatatt 473  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  37448377 agaattttcaaaatgatggaaatttatgaagtatatt 37448341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 477
Target Start/End: Original strand, 11036374 - 11036480
Alignment:
Q  372 taatttaatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactat 470  Q
    |||| ||||||||| ||||||||||||||  |||| |||||||||||| || ||||||||||   ||||||||||||||||||||||||||||||| |||    
T  11036374 taatgtaatgttttaaaggaattcaaatacattgagatgaattttattattagaataataatttgaagaatttttaaaatgatggaaatttatgaagtat 11036473  T
Q  471 attgttc 477  Q
     ||||||    
T  11036474 tttgttc 11036480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 41585725 - 41585626
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||| |||| |||||| |||| ||||||||   ||||||||||||||||||||||||||||||| ||| |||||    
T  41585725 aatgttttgagggaattcaaatactttgaagtgaaatttattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 41585626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 8736476 - 8736376
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||  |||||||||| ||||||||||||||||||||| ||| |||||    
T  8736476 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 8736377  T
Q  477 c 477  Q
    |    
T  8736376 c 8736376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 7167703 - 7167602
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||||||||||||||| |||||  ||||||| ||| ||||  ||||| |   ||||||||| ||||||||||||||||||||| ||| ||||    
T  7167703 taatgttttgaaggaattcaaatactttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgt 7167604  T
Q  476 tc 477  Q
    ||    
T  7167603 tc 7167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 30698318 - 30698419
Alignment:
Q  377 taatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||||||||||||||||  ||||  ||||||| ||| |||| |||||| |   ||||||||| |||||||||||||||| |||| ||| ||||    
T  30698318 taatgttttgaaggaattcaaataccttgaggtgaatttcattgtttggataatagtttgaagaattttcaaaatgatggaaatttgtgaagtattttgt 30698417  T
Q  476 tc 477  Q
    ||    
T  30698418 tc 30698419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 477
Target Start/End: Original strand, 39630265 - 39630362
Alignment:
Q  380 tgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| |||||||||||||||||   ||||| |||| |||| ||||||||   ||  ||||| ||||||||||||||||||||| ||| ||||||    
T  39630265 tgttttgagggaattcaaatatttgaggggaattctattgtttggataataatttgaactattttcaaaatgatggaaatttatgaagtattttgttc 39630362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 21504488 - 21504588
Alignment:
Q  378 aatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| ||||||||||||||| || |||||||  ||| |||||||||||||   ||||||||| ||||||| |  |||||||||| ||| |||||    
T  21504488 aatgttttgagggaattcaaatattttgagatgaattccattgtttgaataataatttgaagaattttcaaaatgaagttaatttatgaagtattttgtt 21504587  T
Q  477 c 477  Q
    |    
T  21504588 c 21504588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 477
Target Start/End: Complemental strand, 45094546 - 45094406
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatatttgaaa-tgaattttattctttgaataataatacaa 436  Q
    |||||||||||||| | |||||||||| |  ||| ||| ||||||||||| |||||| || || || ||| ||||||  ||| |||| |||| |||   |    
T  45094546 ttagagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactactttaaagtgaattccattgtttggataagaatttga 45094447  T
Q  437 agaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| ||||||||||||||||||||| ||| ||||||    
T  45094446 agaattttcaaaatgatggaaatttatgaagtattttgttc 45094406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 477
Target Start/End: Original strand, 44255669 - 44255772
Alignment:
Q  375 tttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatatt 473  Q
    |||| ||||||||  ||||||||||| ||||   |||||| |||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| ||    
T  44255669 tttattgttttgagagaattcaaatactttggggtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttt 44255768  T
Q  474 gttc 477  Q
    ||||    
T  44255769 gttc 44255772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 477
Target Start/End: Original strand, 740736 - 740842
Alignment:
Q  372 taatttaatgttttgaaggaattcaaat-atttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactat 470  Q
    |||| ||||||||||   ||||||| || ||||||  ||||||||||| ||||||| |||||   ||||||||| ||||| ||||||||||||||| |||    
T  740736 taatgtaatgttttgtgagaattcatatcatttgaggtgaattttattgtttgaatgataatttgaagaattttcaaaataatggaaatttatgaagtat 740835  T
Q  471 attgttc 477  Q
     ||||||    
T  740836 tttgttc 740842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 1583886 - 1583744
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatac 434  Q
    |||||||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||      
T  1583886 tcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataattt 1583787  T
Q  435 aaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  1583786 gaagtattttcaaaatgatggaaatttatgaagtattttgttc 1583744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 7228048 - 7227947
Alignment:
Q  377 taatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||||||||| |||||  ||||  | ||||| ||| |||| |||||| |   ||||||||| ||||||||||||||||||||| ||| ||||    
T  7228048 taatgttttgaaggaatttaaataccttgaggtaaatttcattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgt 7227949  T
Q  476 tc 477  Q
    ||    
T  7227948 tc 7227947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 32840227 - 32840138
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||| |||||| ||||| |||||  ||||||| ||| |||| ||||||||   ||||||||| ||||||||||||||| |||||    
T  32840227 aatgttttgagggaatttaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaattcatgaa 32840138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14306810 - 14306742
Alignment:
Q  409 gaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||| |||| ||||||||  ||| |||||||||||||||| ||||||||||| ||| ||||||    
T  14306810 gaatttcattgtttggataataatttaaataatttttaaaatgatgaaaatttatgaattattttgttc 14306742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 466
Target Start/End: Original strand, 17905654 - 17905780
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||| ||| |||||||||| |  ||  ||| ||||||||| |||||||||||||| |||||  ||||||  ||| |||| ||||||||   |||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattccatt-tttggataataatttgaag 17905752  T
Q  439 aatttttaaaatgatggaaatttatgaa 466  Q
     ||||| |||||||||||||||||||||    
T  17905753 gattttcaaaatgatggaaatttatgaa 17905780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 476
Target Start/End: Original strand, 20935744 - 20935843
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| || |||||   ||||||||| |||||||| |||||||||||| ||| |||||    
T  20935744 aatgttttgagggaattcaaatactttgatgtgaattccattgtttggatgataatttgaagaattttcaaaatgattgaaatttatgaagtattttgtt 20935843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 769036 - 769174
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 769135  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||||||| ||| ||||||    
T  769136 cattttcaaaatgatggaaatttatgaagtattttgttc 769174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 11141305 - 11141443
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattacattgtttggataataatttgaag 11141404  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||||||| ||| ||||||    
T  11141405 tattttcaaaatgatggaaatttatgaagtattttgttc 11141443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Complemental strand, 33189330 - 33189192
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 33189231  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||||||| ||| ||||||    
T  33189230 cattttcaaaatgatggaaatttatgaagtattttgttc 33189192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 1730095 - 1730179
Alignment:
Q  382 ttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||| |||||| ||||| ||||| |||||||| ||| |||| ||||||||   ||||||||| |||||||||| ||||||||||    
T  1730095 ttttgagggaatttaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatgg-aatttatgaa 1730179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Original strand, 6749254 - 6749295
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  6749254 aagaattttcaaaatgatggaaatttatgaagtattttgttc 6749295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Original strand, 28740693 - 28740734
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  28740693 aagaattttcaaaatgatggaaatttatgaagtattttgttc 28740734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 17542393 - 17542293
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||||||||||||  |||||||||||||||||||||||||||||||| ||| |||||    
T  17542393 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgtt 17542294  T
Q  477 c 477  Q
    |    
T  17542293 c 17542293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 477
Target Start/End: Complemental strand, 22303943 - 22303802
Alignment:
Q  338 cttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataataca 435  Q
    ||||||||||||||||| | |||||||| |  ||| ||| ||||||||||||||||||||||||  ||||  ||||||| ||| ||||  ||||| |       
T  22303943 cttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttg 22303844  T
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  22303843 aagaattttcaaaatgatggaaatttatgaagtattttgttc 22303802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 33146211 - 33146311
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||  |||||||||| ||||||||||||||||||||| ||| |||||    
T  33146211 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 33146310  T
Q  477 c 477  Q
    |    
T  33146311 c 33146311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 32250131 - 32250041
Alignment:
Q  377 taatgttttgaaggaattcaaatat-ttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||||| ||||||||||||  |||| |||||||  ||| |||| ||||||||  ||||||||||||||||||||| ||||||||||    
T  32250131 taatgttttgagggaattcaaataccttgagatgaattccattgtttggataataatttaaagaatttttaaaatgatggtaatttatgaa 32250041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 462
Target Start/End: Original strand, 22766950 - 22767075
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatatttgaaa-tgaattttattctttgaataataatacaa 436  Q
    |||||||||||||||| | |||||||| |  ||| ||| ||||||||||| |||||||||||| || ||  |||||| |||| |||| ||||||||  ||    
T  22766950 ttagagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattctattgtttggataataatttaa 22767049  T
Q  437 agaatttttaaaatgatggaaattta 462  Q
    |||||||| | |||||||||||||||    
T  22767050 agaattttcagaatgatggaaattta 22767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 11601066 - 11601150
Alignment:
Q  367 taaggtaatttaatgttttgaaggaattcaaat-atttgaaatgaattttattctttgaataataatacaaagaatttttaaaat 450  Q
    ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| |||| || |||||   ||||||||| |||||    
T  11601066 taaggtaatataatgttttgaaggaattcaaataatttgaggtgaattttattatttggatgataatttgaagaattttcaaaat 11601150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 476
Target Start/End: Original strand, 35111263 - 35111363
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||||||||||||||| |||||  ||| || |||| |||| ||||||||   ||||| ||| ||||||||| ||||||||||| ||| ||||    
T  35111263 taatgttttgaaggaattcaaatattttgatgtgagttctattgtttggataataatttgaagaactttcaaaatgatgaaaatttatgaagtattttgt 35111362  T
Q  476 t 476  Q
    |    
T  35111363 t 35111363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 8255054 - 8255119
Alignment:
Q  367 taaggtaatttaatgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataat 432  Q
    ||||||||| ||||||||||| ||||||||||||||| |  ||||||| ||| |||| ||||||||    
T  8255054 taaggtaatgtaatgttttgagggaattcaaatattttaggtgaatttcattgtttggataataat 8255119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 15270886 - 15270797
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||||||||||||    ||||| || |||||||||||||||||||||    
T  15270886 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttgtagaatattcaaaatgatggaaatttatgaa 15270797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 28489549 - 28489590
Alignment:
Q  425 ataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  28489549 ataataatttaaagaatttttaaaatgatggaaatttatgaa 28489590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 37241142 - 37241053
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||| | |||||| ||||| |||||  ||||||  ||| |||| ||||||||   |||||||||||||||||||||||||||||||    
T  37241142 aatgttttcagggaattgaaatactttgaggtgaattccattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaa 37241053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 10314698 - 10314786
Alignment:
Q  389 ggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    ||||||||||||||| ||  |||||| |||| |||| ||||||||   ||||||||| ||||||||| ||||||||||| ||| |||||    
T  10314698 ggaattcaaatattttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattttgtt 10314786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 477
Target Start/End: Original strand, 35379342 - 35379480
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaa 436  Q
    |||||||||||||||| | |||||||| |  || |||| ||||||||||| |||||||||||  |||||| |||||||||||  ||| || |||||   |    
T  35379342 ttagagtgtgtttggatg-gggaatgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaattttattgattggatgataatttga 35379440  T
Q  437 agaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||| |||| |||||| |||||||||||||| ||| ||||||    
T  35379441 aga-ttttcaaaatggtggaaatttatgaagtattttgttc 35379480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 31316205 - 31316288
Alignment:
Q  384 ttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||| |||||||||| | ||||| ||||||| |||| |||| || |||||   |||||||||| ||||||||||||||||||||    
T  31316205 ttgagggaattcaaacactttgagatgaattctattatttggatgataatttgaagaattttttaaatgatggaaatttatgaa 31316288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 14834861 - 14834951
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||| | ||||| |||||| |||||  ||||||| ||| |||| ||||||||   ||||||||| ||||||||| |||||||||||    
T  14834861 taatgttttaagggaatccaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaa 14834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 435 - 477
Target Start/End: Complemental strand, 40089791 - 40089749
Alignment:
Q  435 aaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||    
T  40089791 aaagaattttcaaaatgatggaaatttatgaagtattttgttc 40089749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Complemental strand, 41762285 - 41762147
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 41762186  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||||||| ||| ||||||    
T  41762185 cattttcaaaatgatggaaatttatgaagtattttgttc 41762147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 12479948 - 12480045
Alignment:
Q  381 gttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||| | |||||||||| |||||  ||||||| ||| |||  ||||||||   ||||||||| ||||||||||||||| ||||| ||| ||||||    
T  12479948 gttttgaggaaattcaaatactttgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttgttc 12480045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 30519041 - 30519141
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||| ||| |||||||||||| ||||   ||||||||| | |||| ||||||||   ||||||||| |||||||||| |||||||||| ||| ||||    
T  30519041 taatgttatgagggaattcaaatattttgcggtgaatttta-tgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgt 30519139  T
Q  476 tc 477  Q
    ||    
T  30519140 tc 30519141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 30559381 - 30559481
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||| ||| |||||||||||| ||||   ||||||||| | |||| ||||||||   ||||||||| |||||||||| |||||||||| ||| ||||    
T  30559381 taatgttatgagggaattcaaatattttgcggtgaatttta-tgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgt 30559479  T
Q  476 tc 477  Q
    ||    
T  30559480 tc 30559481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 37241571 - 37241530
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  37241571 aagaattttcaaaatgatggaaatttatgaagtattttgttc 37241530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 22302558 - 22302649
Alignment:
Q  377 taatgttttgaaggaattcaaatatttgaaatg--aattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||||| |||||||||||| || ||| |  ||||  ||| |||| ||||||||   |||| |||| |||||||||||||||||||||    
T  22302558 taatgttttgagggaattcaaatacttaaaaggcgaattccattgtttggataataatttgaagatttttcaaaatgatggaaatttatgaa 22302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 462
Target Start/End: Original strand, 28490031 - 28490115
Alignment:
Q  379 atgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaattta 462  Q
    ||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||   | ||||||| |||||||||||||||||    
T  28490031 atgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaggaattttcaaaatgatggaaattta 28490115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 477
Target Start/End: Original strand, 2863 - 3004
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataataca 435  Q
    ||||||||||||||| || | |||||||| |  ||  ||| ||||||||||| |||||||||||||||||  ||||||  ||| |||| ||||||||       
T  2863 tcttagagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaatatttgaggtgaattccattgtttggataataatttg 2962  T
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  2963 aagaattttcaaaatgatggaaatttatgaaatattttgttc 3004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 14790151 - 14790251
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||||||| |||| ||||||||  |||||||||||||||||||| |||||||| || ||| |||||    
T  14790151 aatgttttgagggaattcaaatactttgaggtgaattttattatttggataataatttaaagaatttttaaaatgatgaaaatttataaagtattttgtt 14790250  T
Q  477 c 477  Q
    |    
T  14790251 c 14790251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 477
Target Start/End: Complemental strand, 25189285 - 25189147
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  |||||||  |||||||||| |||||||||||| |||||| ||||||| ||| |||| || |||||   |||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaatttcattgtttggatgataatttgaag 25189186  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||||||||||||||||| ||| ||| ||||||    
T  25189185 aattttcaaaatgatggaaatttacgaagtattttgttc 25189147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 32650611 - 32650700
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||| |||||||||||| |||||  ||||||||||| |||| ||||||||   ||||||||| |||||||||||||||||||||    
T  32650611 aatgttttgagggaattcaaatactttgaggtgaattttattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 32650700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 3905681 - 3905580
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||| |||||||||||||| |||||  |||||| |||| |||| ||||||||   ||||||||| ||||||||| ||||||||||| ||| ||||    
T  3905681 taatgttttcaaggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaattattttgt 3905582  T
Q  476 tc 477  Q
    ||    
T  3905581 tc 3905580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 30524292 - 30524393
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||| |||||||||||| ||||  |||||||| ||| |||| ||||||||   ||  ||||||||||||||||||||||||||| ||| ||||    
T  30524292 taatgttttgagggaattcaaatactttgggatgaatttcattgtttggataataatttgaaatatttttaaaatgatggaaatttatgaagtattttgt 30524391  T
Q  476 tc 477  Q
    ||    
T  30524392 tc 30524393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 13815015 - 13814915
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| |||||    
T  13815015 aatgttttgagggaattcaaatactttgatgtgaattccattatttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 13814916  T
Q  477 c 477  Q
    |    
T  13814915 c 13814915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 477
Target Start/End: Complemental strand, 23455309 - 23455168
Alignment:
Q  338 cttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataataca 435  Q
    |||||| |||||||||| |||||||||| |  ||| ||| || |||||||| |||||||||||| ||||   ||||||  ||| |||| ||||||||       
T  23455309 cttagaatgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttg 23455210  T
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  23455209 aagcattttcaaaatgatggaaatttatgaagtattttgttc 23455168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 476
Target Start/End: Complemental strand, 28539231 - 28539090
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatac 434  Q
    |||||||||||||||||| | |||||||| |  ||| ||| || |||||||| |||||||||||| ||||   ||||||  ||| |||| ||||||||      
T  28539231 tcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataattt 28539132  T
Q  435 aaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
     ||| ||||| ||||||||||||||||||||| ||| |||||    
T  28539131 gaagcattttcaaaatgatggaaatttatgaagtattttgtt 28539090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 40495279 - 40495368
Alignment:
Q  389 ggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||||||| |||||  |||||| |||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| ||||||    
T  40495279 ggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttc 40495368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 40495755 - 40495855
Alignment:
Q  378 aatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| ||||||||||||||| |   ||||||  ||| |||| ||||||||   ||| ||||||||||||||||||||||||||| ||| |||||    
T  40495755 aatgttttgagggaattcaaatattttggggtgaattccattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgtt 40495854  T
Q  477 c 477  Q
    |    
T  40495855 c 40495855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 40667379 - 40667479
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||| ||||| ||||  |||||||| ||| |||| ||||||||   ||| ||||| ||||||||||||||||||||| ||| |||||    
T  40667379 aatgttttgagggaatttaaatactttgggatgaatttcattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtt 40667478  T
Q  477 c 477  Q
    |    
T  40667479 c 40667479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 45984378 - 45984478
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||| | |||||||||||| |||||  ||||||  ||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| |||||    
T  45984378 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 45984477  T
Q  477 c 477  Q
    |    
T  45984478 c 45984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 45988738 - 45988838
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||| | |||||||||||| |||||  ||||||  ||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| |||||    
T  45988738 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 45988837  T
Q  477 c 477  Q
    |    
T  45988838 c 45988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 475
Target Start/End: Original strand, 15990920 - 15991027
Alignment:
Q  369 aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaac 467  Q
    ||||||| |||||| ||||||||||||||||| ||||| || ||||  ||| |||| || |||||  | || ||||| |||||||||||||||||||||     
T  15990920 aggtaatgtaatgtcttgaaggaattcaaatactttgagataaattgcattgtttggatgataatttagagtattttcaaaatgatggaaatttatgaag 15991019  T
Q  468 tatattgt 475  Q
    ||| ||||    
T  15991020 tattttgt 15991027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 22391609 - 22391509
Alignment:
Q  377 taatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||  ||||| |||||||| ||  ||||||| ||| |||| ||||||||  |||||||||| |||||||||||||||| |||| ||| ||||    
T  22391609 taatgttttgagagaatttaaatattttgaggtgaatttcattgtttggataataatttaaagaatttt-aaaatgatggaaatttctgaagtattttgt 22391511  T
Q  476 tc 477  Q
    ||    
T  22391510 tc 22391509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 36328820 - 36328717
Alignment:
Q  377 taatgttttgaaggaattcaaatatttgaaa---tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatatt 473  Q
    |||||||||||  ||||||||||| || |||   |||||| |||| |||| ||||||||   ||||||||| |||||||||| |||||||||| ||| ||    
T  36328820 taatgttttgagagaattcaaatacttaaaaaggtgaattctattatttggataataatttgaagaattttcaaaatgatggtaatttatgaagtatttt 36328721  T
Q  474 gttc 477  Q
    ||||    
T  36328720 gttc 36328717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 41443090 - 41443021
Alignment:
Q  408 tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| ||||||||| ||||||||   ||||||||| |||||||||||||||||| || ||| ||||||    
T  41443090 tgaattatattctttggataataatttgaagaattttcaaaatgatggaaatttataaagtattttgttc 41443021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 26415991 - 26416091
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||| || ||||||||||| |||||  ||||||| ||  |||| ||||||||   ||||||||| ||||||||||||||||| ||| ||| |||||    
T  26415991 aatgttttaaaagaattcaaatactttgaggtgaatttcatggtttggataataatttgaagaattttcaaaatgatggaaatttaggaagtattttgtt 26416090  T
Q  477 c 477  Q
    |    
T  26416091 c 26416091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Complemental strand, 39342701 - 39342563
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 39342602  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||||||| ||| ||||||    
T  39342601 cattttcaaaatgatggaaatttatgaagtattttgttc 39342563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 462
Target Start/End: Original strand, 43791127 - 43791213
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaattta 462  Q
    ||||||||||| |||||||||||| |||||  |||| |  ||| |||| ||||||||   ||||||||| |||||||||||||||||    
T  43791127 taatgttttgagggaattcaaatactttgaggtgaactccattgtttggataataatttgaagaattttcaaaatgatggaaattta 43791213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 403
Target Start/End: Complemental strand, 29065980 - 29065915
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtct-aaggtaatttaatgttttgaaggaattcaaatattt 403  Q
    |||||||||||||||| |  ||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  29065980 ttagagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattt 29065915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 45967016 - 45967085
Alignment:
Q  408 tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||||| |||| || |||||    |||||||||||||||||| ||||||||||| ||| ||||||    
T  45967016 tgaattttattgtttggatgataattttgagaatttttaaaatgatgaaaatttatgaaatattttgttc 45967085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 476
Target Start/End: Complemental strand, 30080763 - 30080723
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    ||||||||| ||||||||||||||||||||| ||| |||||    
T  30080763 aagaattttcaaaatgatggaaatttatgaagtattttgtt 30080723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 53760825 - 53760725
Alignment:
Q  378 aatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| ||||||||||||||| ||  |||||| |||| |||| ||||||||   ||||||||||||||||||||||||||||||| ||| |||||    
T  53760825 aatgttttgagggaattcaaatattttgatgtgaattctattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 53760726  T
Q  477 c 477  Q
    |    
T  53760725 c 53760725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 29091174 - 29091275
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||| |||||||||||| |||||  |||||| |||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| ||||    
T  29091174 taatgttttgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 29091273  T
Q  476 tc 477  Q
    ||    
T  29091274 tc 29091275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 476
Target Start/End: Original strand, 41139502 - 41139610
Alignment:
Q  369 aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaac 467  Q
    ||||||| ||||||||||| | |||||||||| ||| |  |||||| |||| |||| ||||||||  |||||||||||||||||||| |||||||||||     
T  41139502 aggtaatgtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgaaaatttatgaag 41139601  T
Q  468 tatattgtt 476  Q
    ||| |||||    
T  41139602 tattttgtt 41139610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 465
Target Start/End: Original strand, 4490070 - 4490153
Alignment:
Q  378 aatgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatga 465  Q
    |||||||||| |||||| ||||||||    ||||||||||| |||| ||||||||  |||||||||| ||||||||||||||||||||    
T  4490070 aatgttttgagggaatttaaatattt----tgaattttattgtttggataataatttaaagaattttcaaaatgatggaaatttatga 4490153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 56339171 - 56339269
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||| |||||||||||| |||||  ||||||| ||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| ||||    
T  56339171 aatgttttgagggaattcaaatactttgatgtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 56339269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 40338287 - 40338198
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||| |||||||||||| |||||  ||||||| ||| |||| ||||||||  | |||||||| |||||||||||||||||||||    
T  40338287 aatgttttgatggaattcaaatactttgaggtgaatttcattgtttggataataatttacagaattttcaaaatgatggaaatttatgaa 40338198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 17727010 - 17727066
Alignment:
Q  421 ttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||    
T  17727010 ttgaataataatataaagaatttttaaaatgatgaaaatttatgaaatattttgttc 17727066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 19461778 - 19461682
Alignment:
Q  371 gtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||| |||||||||||  ||||||||||| ||||| || |||| |||| |||| |||||||||   |||||||||| |||||||||||||||||||    
T  19461778 gtaatgtaatgttttgagcgaattcaaataatttgatataaattctattgtttggataataatatggagaatttttagaatgatggaaatttatgaa 19461682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 477
Target Start/End: Original strand, 2125854 - 2125995
Alignment:
Q  338 cttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataataca 435  Q
    ||||||||||||||||| | |||||| | |  ||| ||| || |||||||| |||||||||||| ||||   ||||||  ||| |||| ||||||||       
T  2125854 cttagagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttg 2125953  T
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  2125954 aagcattttcaaaatgatggaaatttatgaagtattttgttc 2125995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 477
Target Start/End: Original strand, 24705432 - 24705489
Alignment:
Q  420 tttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||||||||   |||||||||||||||||| |||||||||||| ||| ||||||    
T  24705432 tttgaataataatttgaagaatttttaaaatgatagaaatttatgaaatattttgttc 24705489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 42775643 - 42775732
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||  ||| |||||| ||||| |||||||||||||||    
T  42775643 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaataattttcaaaataatggaaatttatgaa 42775732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 46242580 - 46242479
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    |||||||||||||||||  ||||| |||||  ||||||  ||| |||| | ||||||   ||||||||| ||||||||||||||||||||| ||| ||||    
T  46242580 taatgttttgaaggaatcaaaatactttgaggtgaattccattgtttggagaataatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 46242481  T
Q  476 tc 477  Q
    ||    
T  46242480 tc 46242479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 476
Target Start/End: Original strand, 26534530 - 26534630
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||| |||||||||||| ||||   |||||| |||| |||| ||||||||   ||||||||| |||||||| |||||| ||||| ||| ||||    
T  26534530 taatgttttgagggaattcaaatactttgttgtgaattctattgtttggataataatttcaagaattttcaaaatgatagaaattcatgaagtattttgt 26534629  T
Q  476 t 476  Q
    |    
T  26534630 t 26534630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 27284685 - 27284597
Alignment:
Q  390 gaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||||| |||||  ||||||| ||| |||| ||||| ||   || |||||||||||||||||||||||||||| ||| ||||||    
T  27284685 gaattcaaatactttgaggtgaatttcattgtttgtataatgatttgaataatttttaaaatgatggaaatttatgaagtattttgttc 27284597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 462
Target Start/End: Complemental strand, 46243130 - 46243047
Alignment:
Q  378 aatgttttgaaggaattcaaatatttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaattta 462  Q
    ||||||||||  ||||||||||||||||  | ||||  ||| |||| ||||||||  |||||||||| |||||||||||||||||    
T  46243130 aatgttttgagagaattcaaatatttgaggt-aattccattgtttggataataatttaaagaattttcaaaatgatggaaattta 46243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 476
Target Start/End: Original strand, 17727103 - 17727202
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||  |||||||||||| |||||  ||||||| ||| |||| ||||||||   ||||||||| ||||| ||||||||||| ||| ||| |||||    
T  17727103 aatgttttgtgggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaattatggaaatttacgaagtattttgtt 17727202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 15660345 - 15660255
Alignment:
Q  338 cttagagtgtgtttggacgagggaatg-tctaaggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaat 426  Q
    ||||||||||||||||| ||||||||| | | ||| ||| ||||||||||| ||||||||| || |||||  |||||| |||| |||||||    
T  15660345 cttagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaat 15660255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 477
Target Start/End: Original strand, 35470162 - 35470260
Alignment:
Q  380 tgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| |||||||||||| ||||   ||||||  ||| |||| ||||||||   ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  35470162 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttc 35470260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 477
Target Start/End: Original strand, 10354371 - 10354480
Alignment:
Q  369 aggtaatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaac 467  Q
    ||||||| |||||||||||   |||| |||||||| ||  |||||| | || |||| ||||||||   ||||||||| |||||||||| ||||||||||     
T  10354371 aggtaatgtaatgttttgagaaaattgaaatatttggaggtgaattctcttatttggataataatttgaagaattttcaaaatgatgggaatttatgaag 10354470  T
Q  468 tatattgttc 477  Q
    ||| ||||||    
T  10354471 tattttgttc 10354480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 13318663 - 13318594
Alignment:
Q  408 tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||||| |||| ||||||||   ||||||||| |||||||| |||| ||||||| ||| ||||||    
T  13318663 tgaattttattgtttggataataatttgaagaattttcaaaatgatagaaacttatgaagtattttgttc 13318594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Original strand, 42776734 - 42776775
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  42776734 aagaattttcaaaatgatggaaatttatgaagtattttgttc 42776775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 52295080 - 52294991
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||| || |||||||||||| ||||| | |||||| ||| |||| ||||||||   ||||||||| |||||||||  ||||||||||    
T  52295080 aatgtttcgagggaattcaaatattttgagacgaatttcattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaa 52294991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 476
Target Start/End: Original strand, 4112 - 4212
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||| |||||||||||| |||||  |||||| |||| |||| ||||||||   ||||||||| ||||||||||||||||||||| ||| ||||    
T  4112 taatgttttgagggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 4211  T
Q  476 t 476  Q
    |    
T  4212 t 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 477
Target Start/End: Original strand, 24044958 - 24045098
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaa 436  Q
    |||||||||||||||| |||||||||| |  ||| ||| ||||||||||||||||||||||||  ||||  ||||||  ||| ||||  ||||| |   |    
T  24044958 ttagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttgggtaatagtttga 24045057  T
Q  437 agaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| ||||||||||||||||||||| ||| ||||||    
T  24045058 agaattttcaaaatgatggaaatttatgaagtattttgttc 24045098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 34008819 - 34008919
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||  |||||||||| ||||||||||||||||||||| ||| |||||    
T  34008819 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 34008918  T
Q  477 c 477  Q
    |    
T  34008919 c 34008919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 33985998 - 33986131
Alignment:
Q  335 aatcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataat 432  Q
    ||||| |||||||||||||| | ||||||||||  | ||||| |||||||||||  ||||||||||| |||||  ||||||| ||| |||  ||||||||    
T  33985998 aatctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaatttcattgtttagataataat 33986097  T
Q  433 acaaagaatttttaaaatgatggaaatttatgaa 466  Q
       ||||||||| ||||||||||||||| |||||    
T  33986098 ttgaagaattttcaaaatgatggaaattcatgaa 33986131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 477
Target Start/End: Complemental strand, 35404796 - 35404687
Alignment:
Q  369 aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaac 467  Q
    ||||||| |||| |||||| | |||||||||| |||||  ||||||||| | |||| |||||||| | |||| ||||||||||||| ||||||||||||     
T  35404796 aggtaatgtaatattttgaggaaattcaaatactttgaggtgaattttactgtttggataataattccaagagtttttaaaatgatagaaatttatgaag 35404697  T
Q  468 tatattgttc 477  Q
    ||| ||||||    
T  35404696 tattttgttc 35404687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 31976634 - 31976538
Alignment:
Q  371 gtaatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||| ||||| ||||| | ||||||||||||| || |||||||| ||| |||| ||||||||   ||||||||| |||||||||||||||||||||    
T  31976634 gtaatgtaatgctttgaggaaattcaaatattttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 31976538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 34388561 - 34388645
Alignment:
Q  393 ttcaaatatttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||||||||  ||||||  ||| |||| ||||||||  |||||| ||||||||||||||||||||||||| ||| ||||||    
T  34388561 ttcaaatatttgaggtgaattccattgtttggataataatttaaagaacttttaaaatgatggaaatttatgaagtattttgttc 34388645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 465
Target Start/End: Complemental strand, 28324749 - 28324619
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatac 434  Q
    |||||||||||||||||| |  ||||||| |  ||| ||| ||||||||||||||||||||||||  ||||  ||||||  ||| |||| |||||| |      
T  28324749 tcttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgagctgaattacattgtttggataatagttt 28324650  T
Q  435 aaagaatttttaaaatgatggaaatttatga 465  Q
     ||||||||| ||||||||||||||||||||    
T  28324649 gaagaattttcaaaatgatggaaatttatga 28324619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 8049291 - 8049392
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||||||| |||||||||||| |||||  | ||||| ||| |||| ||||||||   ||||||||| |||||||| |||||||||||| ||| ||||    
T  8049291 taatgttttgagggaattcaaatactttgaggtaaatttcattgtttggataataatttgaagaattttcaaaatgattgaaatttatgaagtattttgt 8049390  T
Q  476 tc 477  Q
    ||    
T  8049391 tc 8049392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 26520484 - 26520395
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||   ||||||||| |||||||||||||||||||||    
T  26520484 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 26520395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 476
Target Start/End: Complemental strand, 24510279 - 24510223
Alignment:
Q  420 tttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| ||| |||||    
T  24510279 tttgaataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 24510223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 477
Target Start/End: Original strand, 6416227 - 6416322
Alignment:
Q  383 tttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| ||||||||| |||||| ||||||  ||| |||  ||||||||   ||||||||| ||||||||||||||||||||| ||| ||||||    
T  6416227 tttgaagggattcaaatactttgaagtgaattccattgttttgataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttc 6416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 9982663 - 9982774
Alignment:
Q  367 taaggtaatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatga 465  Q
    ||||||||| |||||||||||  ||||| |||||||| ||  ||||||  ||| |||  ||||||||   ||||||||||||||||||| ||||||||||    
T  9982663 taaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgaaaatttatga 9982762  T
Q  466 actatattgttc 477  Q
    | ||| ||||||    
T  9982763 agtattttgttc 9982774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 29257438 - 29257296
Alignment:
Q  337 tcttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatac 434  Q
    |||||||||||||||||| | |||||||| |  ||| ||| || |||||| | |||||||||||| ||||   ||||||  ||| |||| ||||||||      
T  29257438 tcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataattt 29257339  T
Q  435 aaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  29257338 gaagcattttcaaaatgatggaaatttatgaagtattttgttc 29257296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 14239 - 14376
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| ||||||||| | |||||||||||| ||||   ||||||| ||| |||  ||||||||   |||    
T  14239 agagtgtgtttggatg-gggaatgtttggagggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttagataataatttgaag 14337  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||||||| ||| ||||||    
T  14338 tattttcaaaatgatggaaatttatgaagtatcttgttc 14376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 477
Target Start/End: Complemental strand, 29482850 - 29482752
Alignment:
Q  380 tgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||| |||||||||||| ||||   ||||||  ||| |||| ||||||||   ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  29482850 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttc 29482752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 477
Target Start/End: Complemental strand, 31980534 - 31980428
Alignment:
Q  372 taatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactat 470  Q
    |||| ||||||||| | ||||||||||||||| |   ||||||| ||| |||| ||||||||   | | ||||| ||||||||||||||||||||| |||    
T  31980534 taatgtaatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtat 31980435  T
Q  471 attgttc 477  Q
     ||||||    
T  31980434 tttgttc 31980428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 477
Target Start/End: Complemental strand, 33377380 - 33377242
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| | |||||||| |  ||| ||| || |||||||| |||||||||||| ||||   ||||||  ||| |||| ||||||||   |||    
T  33377380 agagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 33377281  T
Q  439 aatttttaaaatgatggaaatttatgaactatattgttc 477  Q
     ||||| ||||||||||||||||| ||| ||| ||||||    
T  33377280 cattttcaaaatgatggaaatttacgaagtattttgttc 33377242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 13144620 - 13144721
Alignment:
Q  377 taatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgt 475  Q
    ||||||| ||| |||||||||||| |||||  ||||||  ||| |||| ||||||||   ||||||||| |||||||||  |||||||||| ||| ||||    
T  13144620 taatgttatgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattttgt 13144719  T
Q  476 tc 477  Q
    ||    
T  13144720 tc 13144721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 29611408 - 29611485
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatg 454  Q
    |||||||||| |||||||||||| |||||  ||||||| ||| |||| ||||||||   ||||||||| |||||||||    
T  29611408 aatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatg 29611485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 44889352 - 44889481
Alignment:
Q  339 ttagagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaa 436  Q
    |||||||||||||||| |  ||||||| |  ||| ||| ||||||||||| |||||||||||| |||||  ||||||  ||| |||| ||||||||        
T  44889352 ttagagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattccattgtttggataataatttgt 44889451  T
Q  437 agaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||| | ||||||| |||||||||||    
T  44889452 agaattttcataatgatgaaaatttatgaa 44889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 31412940 - 31413028
Alignment:
Q  379 atgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    ||||||||| |||||||||||| ||||| |||||||  ||| |||| ||||||||   ||||||||| |||||||||||||||||||||    
T  31412940 atgttttgagggaattcaaatactttgatatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 31413028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 15616365 - 15616296
Alignment:
Q  408 tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||| |||| |||| ||||||||  |||||||||||||||||||| ||||||||||| ||| ||||||    
T  15616365 tgaattctattgtttggataataatttaaagaatttttaaaatgatgcaaatttatgaagtattttgttc 15616296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 477
Target Start/End: Original strand, 9697501 - 9697600
Alignment:
Q  379 atgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||||||||||||||||| |||||  ||||||  ||| |||| |||||| |   | ||||||| ||||||||| ||||||||||| ||| ||||||    
T  9697501 atgttttgaaggaattcaaatactttgatgtgaattccattgtttggataatagtttgatgaattttcaaaatgatgaaaatttatgaagtattttgttc 9697600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 466
Target Start/End: Original strand, 28918165 - 28918292
Alignment:
Q  341 agagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaag 438  Q
    |||||||||||||| |  ||||||| |  ||| ||| ||||||||| | | |||||||||| |||||  ||||||| ||| |||| ||||||||   |||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttggataataatttgaag 28918264  T
Q  439 aatttttaaaatgatggaaatttatgaa 466  Q
     ||||| |||||||||||||||||||||    
T  28918265 gattttcaaaatgatggaaatttatgaa 28918292  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 1368546 - 1368604
Alignment:
Q  408 tgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||| |||| |||| |||||||||  ||| ||||| |||||||||||||||||||||    
T  1368546 tgaattctattgtttggataataatatgaaggattttcaaaatgatggaaatttatgaa 1368604  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 1195371 - 1195471
Alignment:
Q  378 aatgttttgaaggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactatattgtt 476  Q
    |||||||||| ||| |||||||| |||||  ||||||  ||| |||  ||||||||   ||||||||| ||||| ||||||||||||||| ||| |||||    
T  1195371 aatgttttgagggatttcaaatactttgaggtgaattccattgtttagataataatttgaagaattttcaaaattatggaaatttatgaagtattttgtt 1195470  T
Q  477 c 477  Q
    |    
T  1195471 c 1195471  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 477
Target Start/End: Complemental strand, 26901739 - 26901699
Alignment:
Q  437 agaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||||||||||| |||||||||||| ||| ||||||    
T  26901739 agaatttttaaaatgatagaaatttatgaagtattttgttc 26901699  T

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Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 477
Target Start/End: Complemental strand, 4570 - 4433
Alignment:
Q  342 gagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaaga 439  Q
    ||||||||||||| |||||||||| |  ||| ||| ||||||||||| | ||||||||||||| |   ||||||  ||| |||| ||||||||   |||     
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagc 4471  T
Q  440 atttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||| ||||||||||||||||||||| ||| ||||||    
T  4470 attttcaaaatgatggaaatttatgaagtattttgttc 4433  T

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Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 477
Target Start/End: Complemental strand, 5214 - 5077
Alignment:
Q  342 gagtgtgtttggacgagggaatgtcta-aggtaatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaaga 439  Q
    ||||||||||||| |||||||||| |  ||| ||| ||||||||||| | ||||||||||||| |   ||||||  ||| |||| ||||||||   |||     
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagc 5115  T
Q  440 atttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||| ||||||||||||||||||||| ||| ||||||    
T  5114 attttcaaaatgatggaaatttatgaagtattttgttc 5077  T

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Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 19235 - 19327
Alignment:
Q  377 taatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaacta 469  Q
    ||||||||||| ||||||||||||||| ||  ||||||  ||| |||  ||||||||   ||||||||| ||||||||||||||||||||||||    
T  19235 taatgttttga-ggaattcaaatattttgaggtgaattccattgtttcgataataatttgaagaattttaaaaatgatggaaatttatgaacta 19327  T

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Target: scaffold0129; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 19761 - 19720
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  19761 aagaattttcaaaatgatggaaatttatgaagtattttgttc 19720  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 50331 - 50253
Alignment:
Q  389 ggaattcaaata-tttgaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaa 466  Q
    |||||||||||| |||||  ||||||  ||| |||||||||||||   |||| |||| |||||||||||||||||||||    
T  50331 ggaattcaaatactttgatgtgaattccattgtttgaataataatttgaagagttttcaaaatgatggaaatttatgaa 50253  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 477
Target Start/End: Complemental strand, 221237 - 221131
Alignment:
Q  372 taatttaatgttttgaaggaattcaaatattt-gaaatgaattttattctttgaataataatacaaagaatttttaaaatgatggaaatttatgaactat 470  Q
    |||| ||||||||| | ||||||||||||||| |   ||||||| ||| |||| ||||||||   | | ||||| ||||||||||||||||||||| |||    
T  221237 taatgtaatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtat 221138  T
Q  471 attgttc 477  Q
     ||||||    
T  221137 tttgttc 221131  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 16350 - 16309
Alignment:
Q  436 aagaatttttaaaatgatggaaatttatgaactatattgttc 477  Q
    |||||||||||||||||||||||||||| || ||| ||||||    
T  16350 aagaatttttaaaatgatggaaatttataaagtattttgttc 16309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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