View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1314_low_32 (Length: 447)

Name: NF1314_low_32
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1314_low_32
NF1314_low_32
[»] chr1 (61 HSPs)
chr1 (102-376)||(24469816-24470089)
chr1 (102-377)||(47602860-47603134)
chr1 (102-375)||(37441186-37441458)
chr1 (102-375)||(36418969-36419241)
chr1 (153-375)||(32179777-32179998)
chr1 (160-376)||(7702760-7702976)
chr1 (99-246)||(35309477-35309622)
chr1 (198-375)||(25124885-25125061)
chr1 (188-377)||(35810672-35810860)
chr1 (201-376)||(15306460-15306634)
chr1 (188-377)||(42916112-42916300)
chr1 (198-377)||(42937038-42937216)
chr1 (188-375)||(46264944-46265130)
chr1 (204-377)||(45581006-45581178)
chr1 (202-378)||(29677516-29677691)
chr1 (201-377)||(39802765-39802940)
chr1 (188-366)||(7596347-7596524)
chr1 (233-375)||(28006349-28006490)
chr1 (202-375)||(38061178-38061350)
chr1 (204-366)||(20349116-20349277)
chr1 (195-312)||(31869555-31869672)
chr1 (239-375)||(15014320-15014455)
chr1 (188-375)||(23916764-23916950)
chr1 (205-311)||(43087529-43087635)
chr1 (244-378)||(44596527-44596660)
chr1 (195-312)||(23915659-23915776)
chr1 (205-312)||(19508499-19508606)
chr1 (202-369)||(40159636-40159802)
chr1 (233-375)||(24575908-24576049)
chr1 (234-375)||(7995971-7996111)
chr1 (202-375)||(21680656-21680828)
chr1 (234-375)||(50447341-50447481)
chr1 (234-365)||(5204479-5204609)
chr1 (195-377)||(36119033-36119213)
chr1 (49-103)||(37441480-37441534)
chr1 (49-103)||(47603156-47603210)
chr1 (202-307)||(13645247-13645352)
chr1 (188-308)||(15662903-15663023)
chr1 (51-103)||(35309406-35309458)
chr1 (188-300)||(40002848-40002960)
chr1 (212-312)||(45653493-45653593)
chr1 (265-376)||(12224574-12224684)
chr1 (239-366)||(20347671-20347797)
chr1 (200-366)||(31816534-31816699)
chr1 (202-375)||(47983223-47983395)
chr1 (207-312)||(48575142-48575247)
chr1 (188-312)||(29113587-29113710)
chr1 (273-333)||(35309609-35309668)
chr1 (200-311)||(7016138-7016249)
chr1 (256-375)||(14578585-14578703)
chr1 (52-103)||(36418896-36418947)
chr1 (234-376)||(15257170-15257311)
chr1 (230-310)||(14770580-14770660)
chr1 (201-279)||(3577637-3577715)
chr1 (214-303)||(11991252-11991341)
chr1 (291-375)||(6413296-6413379)
chr1 (291-375)||(7841680-7841762)
chr1 (233-312)||(51432265-51432344)
chr1 (234-312)||(27076577-27076655)
chr1 (234-375)||(7956324-7956464)
chr1 (202-279)||(8828321-8828398)
[»] scaffold0316 (2 HSPs)
scaffold0316 (102-375)||(19164-19436)
scaffold0316 (49-103)||(19088-19142)
[»] chr7 (72 HSPs)
chr7 (102-371)||(3930720-3930988)
chr7 (153-379)||(5794932-5795157)
chr7 (102-375)||(37334151-37334423)
chr7 (49-375)||(28949758-28950071)
chr7 (102-374)||(36926871-36927143)
chr7 (102-375)||(48505795-48506060)
chr7 (155-375)||(5776130-5776349)
chr7 (153-375)||(43052796-43053017)
chr7 (153-377)||(42072007-42072230)
chr7 (102-376)||(26216146-26216411)
chr7 (175-377)||(665845-666046)
chr7 (102-301)||(15434116-15434315)
chr7 (188-366)||(45176204-45176381)
chr7 (102-246)||(388859-389003)
chr7 (195-376)||(20400962-20401142)
chr7 (174-375)||(44421901-44422100)
chr7 (174-375)||(33935455-33935653)
chr7 (188-377)||(3942135-3942323)
chr7 (273-369)||(388990-389085)
chr7 (200-375)||(7447847-7448021)
chr7 (190-375)||(22075024-22075208)
chr7 (201-375)||(222226-222399)
chr7 (178-312)||(10618870-10619004)
chr7 (234-376)||(33124700-33124841)
chr7 (212-369)||(45055711-45055867)
chr7 (202-375)||(46573612-46573784)
chr7 (234-374)||(18249994-18250133)
chr7 (205-375)||(11595796-11595965)
chr7 (233-375)||(23226999-23227140)
chr7 (233-375)||(23236152-23236293)
chr7 (202-375)||(21760583-21760755)
chr7 (233-377)||(18740216-18740359)
chr7 (205-312)||(40480112-40480220)
chr7 (215-375)||(49034224-49034383)
chr7 (236-375)||(33898944-33899082)
chr7 (233-375)||(17025361-17025502)
chr7 (201-375)||(33171534-33171707)
chr7 (234-375)||(36472444-36472584)
chr7 (198-375)||(37401566-37401742)
chr7 (212-312)||(23237579-23237679)
chr7 (49-103)||(3931010-3931064)
chr7 (49-103)||(15434040-15434094)
chr7 (49-103)||(42071889-42071943)
chr7 (49-103)||(43052678-43052732)
chr7 (49-103)||(48506082-48506136)
chr7 (234-375)||(26719820-26719960)
chr7 (188-308)||(17608671-17608791)
chr7 (52-103)||(388787-388838)
chr7 (49-103)||(5795221-5795275)
chr7 (188-378)||(27231536-27231725)
chr7 (202-312)||(30919395-30919505)
chr7 (337-378)||(15434312-15434353)
chr7 (244-312)||(48634462-48634530)
chr7 (236-375)||(32356968-32357106)
chr7 (242-377)||(46652631-46652765)
chr7 (376-418)||(31981979-31982021)
chr7 (212-302)||(37250017-37250107)
chr7 (201-309)||(29037845-29037953)
chr7 (201-311)||(2466579-2466690)
chr7 (201-308)||(10096443-10096550)
chr7 (212-267)||(23223561-23223616)
chr7 (188-279)||(44994059-44994150)
chr7 (188-242)||(32245391-32245445)
chr7 (49-103)||(36926796-36926849)
chr7 (234-377)||(35543554-35543693)
chr7 (224-268)||(29527381-29527425)
chr7 (256-375)||(37106853-37106971)
chr7 (49-99)||(45174986-45175036)
chr7 (153-183)||(45176132-45176162)
chr7 (281-374)||(41449792-41449884)
chr7 (99-132)||(45175059-45175092)
chr7 (102-134)||(7444262-7444294)
[»] chr5 (47 HSPs)
chr5 (102-375)||(27905965-27906238)
chr5 (102-371)||(18880062-18880328)
chr5 (102-375)||(29327901-29328183)
chr5 (102-237)||(22921918-22922053)
chr5 (188-376)||(3801363-3801550)
chr5 (188-376)||(31620822-31621009)
chr5 (200-381)||(38522855-38523035)
chr5 (188-376)||(15933114-15933304)
chr5 (178-375)||(1840687-1840883)
chr5 (202-375)||(27450581-27450753)
chr5 (202-375)||(39407374-39407546)
chr5 (198-377)||(20188937-20189115)
chr5 (202-375)||(10493953-10494125)
chr5 (202-375)||(34719657-34719829)
chr5 (205-376)||(26218018-26218188)
chr5 (178-312)||(19282176-19282310)
chr5 (205-378)||(14500703-14500875)
chr5 (202-375)||(26298279-26298451)
chr5 (188-279)||(32157032-32157123)
chr5 (201-375)||(31021830-31022003)
chr5 (188-369)||(20190591-20190770)
chr5 (222-365)||(39414169-39414312)
chr5 (202-372)||(26299815-26299984)
chr5 (230-376)||(27196073-27196218)
chr5 (202-312)||(34723715-34723825)
chr5 (205-375)||(41783296-41783465)
chr5 (207-312)||(11136069-11136173)
chr5 (200-375)||(32945021-32945195)
chr5 (49-103)||(18879986-18880040)
chr5 (49-103)||(22921842-22921896)
chr5 (49-103)||(27905889-27905943)
chr5 (49-103)||(29327825-29327879)
chr5 (202-300)||(39409108-39409206)
chr5 (202-375)||(19716151-19716318)
chr5 (202-375)||(34857315-34857487)
chr5 (202-310)||(30660971-30661079)
chr5 (201-312)||(1225318-1225429)
chr5 (237-375)||(34724754-34724891)
chr5 (201-269)||(3457793-3457861)
chr5 (240-356)||(40056382-40056497)
chr5 (202-310)||(36523719-36523831)
chr5 (201-276)||(43386694-43386769)
chr5 (202-276)||(28431034-28431108)
chr5 (202-277)||(30051422-30051497)
chr5 (326-377)||(32156944-32156995)
chr5 (321-375)||(39409212-39409266)
chr5 (205-266)||(4983414-4983475)
[»] chr4 (70 HSPs)
chr4 (102-375)||(12789552-12789824)
chr4 (114-375)||(53369752-53370012)
chr4 (102-375)||(19852846-19853118)
chr4 (153-376)||(45674754-45674976)
chr4 (153-376)||(50605927-50606149)
chr4 (102-375)||(48977444-48977716)
chr4 (165-375)||(21441512-21441721)
chr4 (153-362)||(44791256-44791464)
chr4 (102-328)||(49820852-49821075)
chr4 (97-286)||(53369551-53369740)
chr4 (188-375)||(9469731-9469917)
chr4 (201-375)||(11055226-11055399)
chr4 (174-375)||(22184445-22184643)
chr4 (202-375)||(24007903-24008075)
chr4 (188-381)||(36543735-36543927)
chr4 (195-376)||(48731172-48731352)
chr4 (174-312)||(52813543-52813679)
chr4 (222-375)||(26632924-26633076)
chr4 (188-375)||(50146918-50147104)
chr4 (202-375)||(80465-80637)
chr4 (205-366)||(36156303-36156463)
chr4 (202-369)||(12673034-12673200)
chr4 (199-376)||(48339098-48339274)
chr4 (201-376)||(15697082-15697256)
chr4 (205-312)||(19455220-19455327)
chr4 (234-369)||(51995078-51995212)
chr4 (201-377)||(28265671-28265843)
chr4 (202-375)||(55891985-55892157)
chr4 (212-312)||(52706195-52706295)
chr4 (216-307)||(6866170-6866261)
chr4 (223-366)||(49083243-49083385)
chr4 (202-312)||(44378218-44378328)
chr4 (202-375)||(40797798-40797970)
chr4 (202-375)||(46944544-46944716)
chr4 (224-381)||(56224135-56224291)
chr4 (204-312)||(1803468-1803576)
chr4 (202-310)||(22721296-22721403)
chr4 (202-306)||(25134542-25134646)
chr4 (202-378)||(48151123-48151298)
chr4 (49-103)||(12789846-12789900)
chr4 (49-103)||(19850521-19850575)
chr4 (49-103)||(45674636-45674690)
chr4 (49-103)||(53369480-53369534)
chr4 (51-103)||(49820778-49820830)
chr4 (201-276)||(16742423-16742498)
chr4 (200-375)||(48802475-48802650)
chr4 (222-312)||(7505517-7505607)
chr4 (49-103)||(44791528-44791582)
chr4 (213-378)||(51407946-51408110)
chr4 (188-308)||(43812123-43812243)
chr4 (201-312)||(27891354-27891464)
chr4 (212-375)||(49405635-49405797)
chr4 (215-276)||(27285617-27285678)
chr4 (204-276)||(38493075-38493147)
chr4 (201-312)||(43798285-43798396)
chr4 (188-366)||(32397707-32397884)
chr4 (174-271)||(43387210-43387305)
chr4 (234-375)||(13455701-13455841)
chr4 (236-276)||(41822113-41822153)
chr4 (346-378)||(43387368-43387400)
chr4 (102-134)||(49378093-49378125)
chr4 (233-276)||(9959342-9959385)
chr4 (201-268)||(28470786-28470853)
chr4 (273-376)||(38791731-38791832)
chr4 (335-376)||(4274555-4274596)
chr4 (215-308)||(5762611-5762703)
chr4 (335-376)||(9959431-9959472)
chr4 (259-312)||(13761824-13761877)
chr4 (206-279)||(24550049-24550122)
chr4 (178-250)||(38791676-38791748)
[»] chr2 (38 HSPs)
chr2 (102-375)||(41959011-41959283)
chr2 (102-375)||(36538524-36538796)
chr2 (153-363)||(34064624-34064833)
chr2 (165-373)||(26436285-26436491)
chr2 (154-375)||(27634585-27634811)
chr2 (195-375)||(33831456-33831635)
chr2 (244-375)||(33163980-33164110)
chr2 (153-260)||(33831346-33831453)
chr2 (201-375)||(3409188-3409361)
chr2 (201-372)||(44740486-44740655)
chr2 (199-375)||(11027873-11028048)
chr2 (205-312)||(2647036-2647143)
chr2 (202-311)||(40458889-40458998)
chr2 (236-371)||(24844670-24844804)
chr2 (207-374)||(30713129-30713295)
chr2 (188-375)||(34116173-34116359)
chr2 (233-312)||(9963758-9963837)
chr2 (188-279)||(39690124-39690215)
chr2 (49-103)||(34064506-34064560)
chr2 (204-372)||(11006977-11007142)
chr2 (49-102)||(26436167-26436220)
chr2 (234-312)||(13829878-13829956)
chr2 (199-377)||(27902437-27902613)
chr2 (49-103)||(36538448-36538502)
chr2 (198-304)||(38409641-38409747)
chr2 (49-103)||(41958935-41958989)
chr2 (204-310)||(18667721-18667827)
chr2 (49-99)||(27633532-27633582)
chr2 (204-276)||(40680191-40680263)
chr2 (233-310)||(1094456-1094533)
chr2 (188-265)||(20987768-20987845)
chr2 (258-375)||(27464572-27464688)
chr2 (191-271)||(14103224-14103304)
chr2 (102-134)||(27633608-27633640)
chr2 (202-258)||(29806885-29806941)
chr2 (291-378)||(20203711-20203797)
chr2 (188-271)||(44935721-44935804)
chr2 (321-375)||(40680295-40680349)
[»] chr8 (17 HSPs)
chr8 (153-375)||(453402-453623)
chr8 (153-369)||(11161491-11161706)
chr8 (212-375)||(9412524-9412686)
chr8 (201-376)||(3307901-3308075)
chr8 (188-379)||(34516092-34516282)
chr8 (205-312)||(43967481-43967588)
chr8 (205-375)||(33279977-33280146)
chr8 (205-375)||(34655006-34655175)
chr8 (202-312)||(22563974-22564084)
chr8 (212-304)||(23181133-23181225)
chr8 (233-365)||(27189092-27189223)
chr8 (212-279)||(10749314-10749381)
chr8 (273-367)||(43384833-43384926)
chr8 (232-312)||(1091725-1091805)
chr8 (321-377)||(39478136-39478192)
chr8 (60-103)||(453293-453336)
chr8 (224-312)||(9135942-9136030)
[»] chr6 (26 HSPs)
chr6 (102-375)||(10346589-10346861)
chr6 (102-375)||(8200510-8200771)
chr6 (202-377)||(3081716-3081890)
chr6 (205-376)||(5640251-5640421)
chr6 (178-375)||(4441301-4441497)
chr6 (188-308)||(9950826-9950946)
chr6 (188-375)||(10961796-10961982)
chr6 (202-375)||(13311990-13312164)
chr6 (202-375)||(7437272-7437444)
chr6 (232-311)||(32163539-32163618)
chr6 (205-372)||(33110429-33110595)
chr6 (201-375)||(1501815-1501988)
chr6 (174-312)||(6999209-6999345)
chr6 (202-307)||(22295884-22295989)
chr6 (49-103)||(10346513-10346567)
chr6 (202-312)||(18099784-18099894)
chr6 (200-375)||(17441123-17441298)
chr6 (49-103)||(8200434-8200488)
chr6 (230-312)||(18095515-18095597)
chr6 (188-308)||(27984956-27985076)
chr6 (201-276)||(12428854-12428929)
chr6 (201-375)||(11460014-11460179)
chr6 (238-277)||(13355722-13355761)
chr6 (202-277)||(2962799-2962874)
chr6 (201-260)||(3901548-3901607)
chr6 (233-276)||(21298912-21298955)
[»] chr3 (43 HSPs)
chr3 (102-369)||(41609755-41610021)
chr3 (153-375)||(32689088-32689309)
chr3 (102-373)||(23206310-23206580)
chr3 (178-378)||(9505118-9505317)
chr3 (188-378)||(44574480-44574669)
chr3 (188-375)||(39135308-39135494)
chr3 (221-377)||(19560772-19560927)
chr3 (188-380)||(39469526-39469717)
chr3 (188-375)||(54393443-54393629)
chr3 (202-375)||(12710670-12710842)
chr3 (195-376)||(25253663-25253843)
chr3 (188-369)||(39942806-39942986)
chr3 (201-375)||(52934779-52934952)
chr3 (231-375)||(52199426-52199569)
chr3 (198-375)||(46293213-46293389)
chr3 (195-312)||(28242544-28242661)
chr3 (202-375)||(30662131-30662303)
chr3 (188-376)||(33438730-33438917)
chr3 (233-374)||(26049541-26049681)
chr3 (201-304)||(50965370-50965474)
chr3 (201-304)||(51068505-51068609)
chr3 (202-375)||(40943529-40943701)
chr3 (174-286)||(52199331-52199441)
chr3 (255-375)||(30743593-30743712)
chr3 (205-311)||(5418649-5418755)
chr3 (49-103)||(41609679-41609733)
chr3 (189-366)||(18074531-18074707)
chr3 (51-103)||(32688972-32689024)
chr3 (49-103)||(23206602-23206656)
chr3 (202-375)||(20550202-20550374)
chr3 (191-311)||(28687029-28687149)
chr3 (188-279)||(53529685-53529776)
chr3 (234-312)||(15822411-15822489)
chr3 (201-311)||(26136300-26136410)
chr3 (321-375)||(54432177-54432231)
chr3 (214-311)||(1674609-1674706)
chr3 (195-250)||(33896791-33896846)
chr3 (245-312)||(36917885-36917952)
chr3 (201-270)||(1072813-1072882)
chr3 (230-279)||(31589618-31589667)
chr3 (220-269)||(37269058-37269107)
chr3 (343-376)||(53529616-53529649)
chr3 (323-371)||(45714784-45714832)
[»] scaffold0224 (1 HSPs)
scaffold0224 (188-377)||(7306-7494)
[»] scaffold0022 (1 HSPs)
scaffold0022 (191-369)||(124487-124664)
[»] scaffold0260 (2 HSPs)
scaffold0260 (204-366)||(11439-11600)
scaffold0260 (239-366)||(9994-10120)
[»] scaffold0204 (1 HSPs)
scaffold0204 (199-376)||(26620-26796)
[»] scaffold0171 (1 HSPs)
scaffold0171 (230-375)||(21084-21227)
[»] scaffold0444 (1 HSPs)
scaffold0444 (202-312)||(829-939)
[»] scaffold0954 (1 HSPs)
scaffold0954 (212-312)||(246-346)
[»] scaffold0025 (1 HSPs)
scaffold0025 (220-375)||(11376-11530)
[»] scaffold0223 (1 HSPs)
scaffold0223 (200-375)||(14392-14566)
[»] scaffold0192 (1 HSPs)
scaffold0192 (220-271)||(25668-25719)


Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 102 - 376
Target Start/End: Complemental strand, 24470089 - 24469816
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24470089 aagacaaaattgtattcagcgacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 24469990  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24469989 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 24469890  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24469889 caagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 24469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 102 - 377
Target Start/End: Complemental strand, 47603134 - 47602860
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47603134 aagacaaaattgtattcaaccacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 47603035  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47603034 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 47602935  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47602934 caagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagccctact 47602860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 102 - 375
Target Start/End: Complemental strand, 37441458 - 37441186
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| || ||||    
T  37441458 aagacaaaattgtattcagccacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagacatc 37441359  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37441358 tcattaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 37441259  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  37441258 caagttcaac-ggattagatatcgagttgaatgtcgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 36418969 - 36419241
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||| || ||||    
T  36418969 aagacaaaattgtattcagccacatttgccacatttgaattaaaaaaatttaaaaactaattcaaattgatttatatatataatcgataatcgagtcatc 36419068  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  36419069 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaac 36419168  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36419169 caagttcgac-ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 36419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 153 - 375
Target Start/End: Original strand, 32179777 - 32179998
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  32179777 aaaaactaactcaaattgatttatatatataatcgataattgagtcatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaa 32179876  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  32179877 ttaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagtt 32179975  T
Q  353 ggttcggttcattgccagcccta 375  Q
    |||||||||||||||||||||||    
T  32179976 ggttcggttcattgccagcccta 32179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 160 - 376
Target Start/End: Original strand, 7702760 - 7702976
Alignment:
Q  160 aactcaaattgatt-tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacg 258  Q
    ||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||||||| ||| |||  |||||| |||||||||||||||||||||||    
T  7702760 aactcaaattgtttatatatatataatcaataatcgagctatctcatgaacctaacgagtagaattatgcgtagcttaagttcagctcatttaattaacg 7702859  T
Q  259 aacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcg 358  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  7702860 aacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcg 7702958  T
Q  359 gttcattgccagccctac 376  Q
    ||||||||||||||||||    
T  7702959 gttcattgccagccctac 7702976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 35309477 - 35309622
Alignment:
Q  99 tttaagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagcc 198  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||  |||||||||||| | ||||    
T  35309477 tttaagacaaaattgaattcagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttata--tataatcgataagcgagcc 35309574  T
Q  199 atctcatgaacctaacgagttgaactatatgtagctcaagttcagctc 246  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  35309575 atctcatgaacctaacgagtcgaactatatgtagctcaagttcagctc 35309622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 198 - 375
Target Start/End: Complemental strand, 25125061 - 25124885
Alignment:
Q  198 catctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    |||||| |||||| |||||| ||||||| || |||||||||||||||||| ||| || ||||| |||||||||| ||||||| | |||| || |||||||    
T  25125061 catctcgtgaaccaaacgagctgaactacatatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcat 25124962  T
Q  298 gaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||||||| | || |  |||| | ||||||  |||||| |||||||||||||||||||||||||||||||||    
T  25124961 gaaccaagttcaac-gaatcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 188 - 377
Target Start/End: Original strand, 35810672 - 35810860
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||| |||||| || ||| |||||||| ||||| ||| || |||||||||||||||| ||||||| | ||||     
T  35810672 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctca 35810771  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    || ||||||||||||||||||||| | || |  | |||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  35810772 tttggttcatgaaccaagttcaac-gaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagccctact 35810860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 376
Target Start/End: Original strand, 15306460 - 15306634
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| |||||||||  ||||||||||| ||||||||| |||| |||||||||||||  ||||||| |||||| || ||||||||||    
T  15306460 ctcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaa 15306559  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    ||||||||||  | ||||  |||||| |||| |  ||||||||  || ||||||||||||||||||||||||||||    
T  15306560 ccaagttcaa-tgaattaattatcgaatcgagttccgaactattgtcaagttggttcggttcattgccagccctac 15306634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 377
Target Start/End: Complemental strand, 42916300 - 42916112
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||| ||||||| || |||||| | | |||||||||||||| ||| ||| ||||||||||||||| ||||||| | ||||     
T  42916300 ataatcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctca 42916201  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    || |||||||||||||||||| || | || |  |||||| ||||||  |||||  ||||||| ||||||||||||||||||| |||||||    
T  42916200 tttggttcatgaaccaagttcgac-gaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattgccacccctact 42916112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 377
Target Start/End: Original strand, 42937038 - 42937216
Alignment:
Q  198 catctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    |||||| |||||| ||||||||||||||||  |||||||||||||||||| ||| || |||||||||||||| | ||||||| | |||| || | |||||    
T  42937038 catctcgtgaaccaaacgagttgaactatacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcat 42937137  T
Q  298 gaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||||||||||| || | || |  | | || ||||||  |||||| ||||||||||||||| |||||||||||||||||||    
T  42937138 gaaccaagttcgac-gaatcaattgttgaatcgaattacgaactctaatcgagttggttcagttcattgccagccctact 42937216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 375
Target Start/End: Complemental strand, 46265130 - 46264944
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||| ||||||| || |||||| ||| |||||||||||||| ||| ||| ||||||||||||||| ||||||| | ||||     
T  46265130 ataatcgagtcatctcatgaaccaaacgagtcgacctatatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctca 46265031  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||  ||||||||||||||||| || | || |  |||||| ||||||  |||||  ||||||| ||||||||||||||||||| |||||    
T  46265030 tttagttcatgaaccaagttcgac-gaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattgccaccccta 46264944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 204 - 377
Target Start/End: Complemental strand, 45581178 - 45581006
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||||| ||||||| |||| |||| ||||| | ||||| |||||||| |||| |||||||||||||  ||||||| || ||| || |||||||||||||    
T  45581178 atgaaccaaacgagtcgaaccatatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaacca 45581079  T
Q  304 agttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||||||||| || ||  |||||| |||| | |||||||||  || |||||||||||||||||| ||||||||||    
T  45581078 agttcaacgaga-taattatcgaatcgagtttcgaactattttcaagttggttcggttcattgtcagccctact 45581006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 378
Target Start/End: Complemental strand, 29677691 - 29677516
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||| | ||||||| ||||||||  ||| |||||||||||||||||| |||| || ||||||||||||||||||| |  ||| || ||||| |||||    
T  29677691 tcatgaagcaaacgagtcgaactatacttagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaac 29677592  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
    |||||||||| | |  |  |||| | |||| | |||||||||  |||||||||||||||||||||||||||||||||    
T  29677591 caagttcaac-gaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcattgccagccctactt 29677516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 201 - 377
Target Start/End: Complemental strand, 39802940 - 39802765
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| ||||| | || |||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||| |  ||| || ||||||||||    
T  39802940 ctcatgaaccaaacgaatcgagctatacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaa 39802841  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||| ||||||| | ||||  |  |||  ||| | |||||||||  ||||||||||||| ||||||||||||||||||    
T  39802840 ccatgttcaac-gaattaactgccgaaccgagtctcgaactattttcgagttggttcgattcattgccagccctact 39802765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 366
Target Start/End: Original strand, 7596347 - 7596524
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||| | ||||||| |||||| || ||| |||||||||||||| ||| ||| ||||||||||||||| ||||||| | ||||     
T  7596347 ataatcgagtcatctcatgaatcaaacgagtcgaactacatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctca 7596446  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    || ||||||| |||||||||| || | || |  |||||| || |||  |||||| ||||||||||||||||||||||||    
T  7596447 tttggttcataaaccaagttcgac-gaatcaattatcgaatcaaattacgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 233 - 375
Target Start/End: Original strand, 28006349 - 28006490
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||||| |  ||| || |||||||||||||||||||||| | | |  |||||| |||||    
T  28006349 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgag-tcaattatcgaatcgaa 28006447  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |||||||||  ||||||||||||||||||||||| ||||||    
T  28006448 tctcgaactattttcgagttggttcggttcattgccggcccta 28006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 38061350 - 38061178
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||| ||||||||| |||||||| ||||||| ||||||||| |||| |||| |  ||| |||||||||| ||     
T  38061350 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaat 38061251  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | || |  |||| | |||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  38061250 caagttcaac-gaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcattgccagcccta 38061178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 20349116 - 20349277
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||||| ||||||| ||| ||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||    
T  20349116 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 20349215  T
Q  304 agttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    |||||||| | ||||  ||||||||| ||| |  ||||||  |||||||||||||||||||||    
T  20349216 agttcaac-gaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 31869555 - 31869672
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    ||||| |||||||||| | ||||| ||| |||||  ||||||||||| ||||||||| ||||||||||||||||||| || |||| | |||| || ||||    
T  31869555 agccagctcatgaaccaaccgagtcgaattatatacagctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggtt 31869654  T
Q  295 catgaaccaagttcaacg 312  Q
    ||||||||||||||||||    
T  31869655 catgaaccaagttcaacg 31869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 375
Target Start/End: Original strand, 15014320 - 15014455
Alignment:
Q  239 ttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcga 338  Q
    ||||||||| |||||| | |||||||||||||||||||||| | |||| || |||||||||| ||||||| || | || |  |||||| ||||||  |||    
T  15014320 ttcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgac-gaatcaattatcgaatcgaattacga 15014418  T
Q  339 actataatcgagttggttcggttcattgccagcccta 375  Q
    ||| ||||||||||||||||||||||||||| |||||    
T  15014419 actctaatcgagttggttcggttcattgccaacccta 15014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 375
Target Start/End: Original strand, 23916764 - 23916950
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||| |||||| || | |||||||||||||||| ||| || |||||||||||||||| |||||||   ||||     
T  23916764 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatattgctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctca 23916863  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || |||| ||||||||||||  |  | || |  |||||| ||||||  |||||| |||||||||||||| ||||||||| ||||||||    
T  23916864 tttggttaatgaaccaagtttga-tgaatcaattatcgaatcgaattacgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 43087635 - 43087529
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||| | ||||||||| || |||||||||| ||||||||||||||||||||||| || |  |||||| | ||||||| ||||||||||||||    
T  43087635 tgaaccaaacgaatcgaactatatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaa 43087536  T
Q  305 gttcaac 311  Q
    |||||||    
T  43087535 gttcaac 43087529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 44596527 - 44596660
Alignment:
Q  244 ctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactat 343  Q
    |||||||| |||||||||||||||||||  |||||| |||||| || |||||||||||||| ||||||| | |||  | |||| |||| |  | ||||||    
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgag-ttaattgtcgaatcgagttccaaactat 44596625  T
Q  344 aatcgagttggttcggttcattgccagccctactt 378  Q
      |||||||||||||||||||||||||||||||||    
T  44596626 tgtcgagttggttcggttcattgccagccctactt 44596660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 23915776 - 23915659
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    ||||| ||||| |||| | ||||| |||||||||  | |||||||||| |||||||| |||| |||||||||||||| || |||| |||||| || ||||    
T  23915776 agccaactcattaaccaatcgagtcgaactatatacaactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggtt 23915677  T
Q  295 catgaaccaagttcaacg 312  Q
    ||||||||||||||||||    
T  23915676 catgaaccaagttcaacg 23915659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 19508499 - 19508606
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||| ||| ||||||||| || |||||| ||| |||||||| |||||||||||||| || | ||||||| | ||||||| ||||||||||||||    
T  19508499 tgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 19508598  T
Q  305 gttcaacg 312  Q
    ||||||||    
T  19508599 gttcaacg 19508606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 369
Target Start/End: Complemental strand, 40159802 - 40159636
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   || ||||||||| |||||||| ||||||||||||||||||||||||||| |  ||| || | |||||||||    
T  40159802 tcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaac 40159703  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    ||||| |||  | |  |  |||||| |||||| || ||||||  ||||||||||||||||||||||||    
T  40159702 caagtccaa-tgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcattgcca 40159636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 233 - 375
Target Start/End: Original strand, 24575908 - 24576049
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    |||||||||  |||||||| ||||| | ||||||||||||||||||| |   || || |||||||||||||||||||||| | | |  |||||| || ||    
T  24575908 ctcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgag-tcaattatcgaatcaaa 24576006  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |||||||||  ||||||||||||||||||||| ||||||||    
T  24576007 tctcgaactattttcgagttggttcggttcattgtcagcccta 24576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 7995971 - 7996111
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||| |||||||||| ||||||| ||||||||| |||| |||| |  ||| ||||||| |||||||||||||||||  || |  |||||| ||||||    
T  7995971 tcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacga-atcaattatcgaatcgaat 7996069  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     |||||||||  || |||||||||||||||||| || |||||    
T  7996070 ctcgaactattttcaagttggttcggttcattgtcaacccta 7996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 21680828 - 21680656
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||  ||| ||||||||||||||||| | | |||||| || ||||  |||||||||||||||| | ||||||| | |||| ||   ||||| |||    
T  21680828 tcatgaactaaacaagttgaactatatgtagtttatgttcagttcgtttagctaacgaacttaatttttagctcaagttcggctcatttcattcataaac 21680729  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| || ||  |||||| |||| | |||||||||  ||||| |||||||||||||||||| |||||    
T  21680728 caagttcaacgaga-taattatcgaatcgagtttcgaactattttcgagctggttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 50447341 - 50447481
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| |||||||| ||||||||||||||||| |  |||||| | |||| || ||||||| ||||||||| ||| | ||||  |||||| |||| |    
T  50447341 tcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaac-gaattaattatcgaatcgagt 50447439  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     |||||||||  ||||||||||| ||||||||| ||||||||    
T  50447440 ctcgaactattttcgagttggtttggttcattgtcagcccta 50447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 365
Target Start/End: Complemental strand, 5204609 - 5204479
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||| |  ||| || |||||| ||||||||||||||| | | |  |||||| ||||||    
T  5204609 tcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgag-tcaattatcgaatcgaat 5204511  T
Q  334 gtcgaactataatcgagttggttcggttcatt 365  Q
     || ||||||  ||||||||||||| ||||||    
T  5204510 ctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 377
Target Start/End: Original strand, 36119033 - 36119213
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    ||||| |||||||||| ||||| | ||| ||||| ||| ||||||||||||| |||| ||||| ||||| | ||| ||||||||| ||| || || ||||    
T  36119033 agccaactcatgaaccaaacgaatcgaattatatatagttcaagttcagctcgtttagttaacaaacttca-tttgaactcaagttcagttcatttggtt 36119131  T
Q  295 catgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||| |||||||||| ||| ||  |  | |||| |||||| |||||||||  |  |||||||||||||||||| ||||||||||    
T  36119132 cataaaccaagttcgacgaga-aaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagccctact 36119213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 37441534 - 37441480
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  37441534 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 37441480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 47603210 - 47603156
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47603210 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 47603156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 13645352 - 13645247
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| || |||| ||||||||| || ||||| |||| |||||||| |||||||||||||| || | ||||||| | ||||||| | |||||||||    
T  13645352 tcatgaaccaaatgagtcgaactatatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaac 13645253  T
Q  302 caagtt 307  Q
    ||||||    
T  13645252 caagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 15662903 - 15663023
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||| || |||| |||||| || ||||| |||||| | ||| ||| || |||||||||||||||| ||||||| | ||||     
T  15662903 ataatcgagtcatctcatgaaccaaaagagtcgaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagctcaagttcggctca 15663002  T
Q  288 ttaggttcatgaaccaagttc 308  Q
    || ||| ||||||||||||||    
T  15663003 tttggtacatgaaccaagttc 15663023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 35309406 - 35309458
Alignment:
Q  51 caacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  35309406 caacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 35309458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 40002848 - 40002960
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||| | ||||||| |||||| || ||||||||||||| |||| ||| || |||||||||||||||||||||||| | ||||     
T  40002848 ataatcgagtcatctcgtgaatcaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctca 40002947  T
Q  288 ttaggttcatgaa 300  Q
    || | ||||||||    
T  40002948 tttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 45653593 - 45653493
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| ||||||||| ||| ||| |||||| |||||||  |||||||||||| ||| | ||||||| | |||| || |||||||||||||||||||||    
T  45653593 aacgagtcgaactatatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaac 45653494  T
Q  312 g 312  Q
    |    
T  45653493 g 45653493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 376
Target Start/End: Complemental strand, 12224684 - 12224574
Alignment:
Q  265 attttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 364  Q
    ||||||| ||||||| | |||| || |||||||||||||||||||||| | |||  | |||| ||||||  ||||||||  |||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgag-ttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcat 12224586  T
Q  365 tgccagccctac 376  Q
    || |||||||||    
T  12224585 tgtcagccctac 12224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 20347671 - 20347797
Alignment:
Q  239 ttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcga 338  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| |||||| | ||||  | ||||||| ||| |  |    
T  20347671 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaac-gaattaattgtcgagtcaaattttaa 20347769  T
Q  339 actataatcgagttggttcggttcattg 366  Q
    |||||| |||||||| ||||||||||||    
T  20347770 actatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 366
Target Start/End: Original strand, 31816534 - 31816699
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    |||| |||||| ||||||| ||| |||   || ||||||||| ||||||||| || |||| |||||||||| ||| |||| || ||| || |||||||||    
T  31816534 tctcgtgaaccaaacgagtcgaattatccataactcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatga 31816633  T
Q  300 accaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    |||||||||||| | || |  || ||| | || | |||||||||  |||||||||||||||||||||    
T  31816634 accaagttcaac-gaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattg 31816699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 47983223 - 47983395
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||  || || ||||||| |||||||| |||||||  |||  ||| ||||||||| |  ||| || ||||| |||||    
T  47983223 tcatgaaccaaacgagtcgaaccatacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaac 47983322  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||   || |  |||||| |||||| |||||||||  ||||||||||||||||||||| || |||||    
T  47983323 caagttcaacaa-atcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgtcaacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 48575247 - 48575142
Alignment:
Q  207 aacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagt 306  Q
    |||| |||| || ||||||||  || |||||||||| |||||||| || |||||||||||||| || |||||| |   ||||| ||||||||||||||||    
T  48575247 aaccaaacgggtcgaactatacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagt 48575148  T
Q  307 tcaacg 312  Q
    ||||||    
T  48575147 tcaacg 48575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 29113710 - 29113587
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| ||| | |||||||||| ||||||||||||||||  ||||||||||||| ||| ||| |||  | |||||||||||||  |||| | ||||       
T  29113710 ataatcgagctaactcatgaaccaaacgagttgaactatacatagctcaagttcacctc-ttttattggcaaacttaattttcagttcaaattcagccta 29113612  T
Q  288 ttaggttcatgaaccaagttcaacg 312  Q
    || ||||||||||||||||||||||    
T  29113611 tttggttcatgaaccaagttcaacg 29113587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 35309609 - 35309668
Alignment:
Q  273 ctcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  35309609 ctcaagttcagctcgtgaggttcatgaaccaagttcaac-ggattaaatatcgagtcgaat 35309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 7016249 - 7016138
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    |||||||| || ||||||| ||||  ||| ||||||||| |||||| |||   ||||| |||||| |||| | ||||||| |||||| || |||||||||    
T  7016249 tctcatgacccaaacgagtcgaaccgtatatagctcaagctcagcttattaggttaacaaacttagttttgagctcaagttcagctcatttggttcatga 7016150  T
Q  300 accaagttcaac 311  Q
    ||||||||||||    
T  7016149 accaagttcaac 7016138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 375
Target Start/End: Complemental strand, 14578703 - 14578585
Alignment:
Q  256 acgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggt 355  Q
    |||||||||||||||| ||| ||| | |||| || |||||||||||||||||||||   || |  | || | ||||||  |||||| |||||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaa-atcaattgtctaatcgaattacgaactctaatcgagttggt 14578605  T
Q  356 tcggttcattgccagcccta 375  Q
    ||||||||||| ||||||||    
T  14578604 tcggttcattgtcagcccta 14578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 36418896 - 36418947
Alignment:
Q  52 aacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  36418896 aacaaaattcaattagctgtgaacaaaattcataatattattttacttttaa 36418947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 376
Target Start/End: Complemental strand, 15257311 - 15257170
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    |||| |||| |||||||| ||||||| ||||||||||||||||||| |  ||| || |||||||||||||||| |||  | |  |  |||||| |||| |    
T  15257311 tcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa-tgaaccaattatcgaatcgagt 15257213  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
     || ||||||  | ||||||||||||||||||| |||||||||    
T  15257212 atcaaactatttttgagttggttcggttcattgtcagccctac 15257170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 310
Target Start/End: Complemental strand, 14770660 - 14770580
Alignment:
Q  230 tagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaa 310  Q
    |||||||||||||||||| ||| || |||||||||||||| |  |||||| | |||| || ||||||| ||||||||||||    
T  14770660 tagctcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 3577637 - 3577715
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    ||||| |||| | ||||| |||||| || |||||||||||||||||||||| |||||||| | | |||||| |||||||    
T  3577637 ctcataaaccaaccgagtcgaactacatatagctcaagttcagctcatttatttaacgaattaatttttcagctcaagt 3577715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 11991252 - 11991341
Alignment:
Q  214 cgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||| ||||||||| ||| | |||||||| ||||||| ||||||||| |||||||||| | |||| || ||  || |||||||||||||    
T  11991252 cgagtcgaactatatatagtttaagttcagttcatttagttaacgaacataattttcaatttaagttcatcttatttggttcatgaacca 11991341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 6413296 - 6413379
Alignment:
Q  291 ggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||||| ||||||||  || |  |||| | |||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  6413296 ggttcatgaaccaggttcaacga-atcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgccagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 7841680 - 7841762
Alignment:
Q  291 ggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||||||||||||||  ||||  |||||| |||| | ||||| |||  ||||||||||||||||||||| ||||||||    
T  7841680 ggttcatgaaccaagttcaacga-attaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 51432344 - 51432265
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||||||||| ||||| |||||||  |||||||||| || || | || ||| || |||||||||||||||| |||||    
T  51432344 ctcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacg 51432265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 27076655 - 27076577
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||||| ||| |||| ||||||||||||| ||| | ||||||| | |||| ||  ||||||| |||||||||||||    
T  27076655 tcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacg 27076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 7956324 - 7956464
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| |||||||| ||||| | |||||||||||| |||||| |  ||  ||  ||||||||||||||| ||| |  |  |  |||||| | || |    
T  7956324 tcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatga-accaattatcgaattgagt 7956422  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     |||||||||  |||||||||||||||||||||||| |||||    
T  7956423 atcgaactattttcgagttggttcggttcattgccaacccta 7956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 8828398 - 8828321
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    ||||||| | ||||||| ||| ||| | ||||||||||||| || ||||| |||||  |||||||||||| |||||||    
T  8828398 tcatgaatcaaacgagtcgaattatgtctagctcaagttcaacttatttagttaacagacttaattttcagctcaagt 8828321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 19164 - 19436
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  19164 aagacaaaattgtattcagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 19263  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19264 tcatgaacctaacgagtcgaattatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 19363  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19364 caagttcaa-aggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 19088 - 19142
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  19088 tccaacaaaatttaattagttgtgaacaaaattcataatattcttttacttttaa 19142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 213; Significance: 1e-116; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 102 - 371
Target Start/End: Complemental strand, 3930988 - 3930720
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  3930988 aagacaaaattgtattcagccacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 3930889  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  3930888 tcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggac 3930789  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagc 371  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3930788 caagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttgtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 153 - 379
Target Start/End: Complemental strand, 5795157 - 5794932
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5795157 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 5795058  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  5795057 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgggtt 5794959  T
Q  353 ggttcggttcattgccagccctactta 379  Q
    |||||||||||||||||||||||||||    
T  5794958 ggttcggttcattgccagccctactta 5794932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 37334151 - 37334423
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  37334151 aagacaaaattgtattcagcgacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcgacaatcgagccatc 37334250  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37334251 tcatgaacctaatgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 37334350  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||    
T  37334351 caagttcaac-ggattaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 49 - 375
Target Start/End: Complemental strand, 28950071 - 28949758
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaagacaaaattgtattcagccacatttgccacatttgaattaa-nnn 147  Q
    |||||||||| |||||||| | ||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||        
T  28950071 tccaacaaaattcaattagctatgaacaaaattcataatattcttttactttta-------------ttcagccacatttgccacatttgaattaatttt 28949985  T
Q  148 nnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctca 247  Q
        ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28949984 tttaaaaaaactacctcaaattgatttatatatataatcgataatcgagtcatttcatgaacctaacgagtcgaactatatgtagctcaagttcagctca 28949885  T
Q  248 tttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatc 347  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28949884 tttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatc 28949786  T
Q  348 gagttggttcggttcattgccagcccta 375  Q
    |||||| |||||||||||||||||||||    
T  28949785 gagttgattcggttcattgccagcccta 28949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 102 - 374
Target Start/End: Original strand, 36926871 - 36927143
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnn-aaaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||||| ||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  36926871 aagacaaaattgtattcaaccacatttgtcacatttgaattaattttttttaaaaaactaactcaaattgatttatatatataatcaataatcaagcaat 36926970  T
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  36926971 ctcatgagcctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaa 36927070  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 374  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36927071 ccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 36927143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 102 - 375
Target Start/End: Complemental strand, 48506060 - 48505795
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  48506060 aagacaaaattgtattcagccacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 48505961  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  48505960 tcatgtacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaac 48505861  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| ||||||||||| ||       ||||||||||||||||||||||||||||||||| ||||||||    
T  48505860 caagttcaac-ggattagatattga-------gtcgaactataatcgagttggttcggttcattgtcagcccta 48505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 155 - 375
Target Start/End: Complemental strand, 5776349 - 5776130
Alignment:
Q  155 aaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaatt 254  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  5776349 aaactaactcaaattgatttttatatataatcgataatcgagtcatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaatt 5776250  T
Q  255 aacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttgg 354  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  5776249 aacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttgg 5776151  T
Q  355 ttcggttcattgccagcccta 375  Q
    ||||||||||||||| |||||    
T  5776150 ttcggttcattgccaacccta 5776130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 153 - 375
Target Start/End: Original strand, 43052796 - 43053017
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||    
T  43052796 aaaaactaactcaaattgatttatatatataatcgataatcgagtcatctcatgaatctaacgagtcgaactatatgtagctcaagttcagctcatctaa 43052895  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  43052896 ttaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagtt 43052994  T
Q  353 ggttcggttcattgccagcccta 375  Q
    ||||||||||||||||| |||||    
T  43052995 ggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 153 - 377
Target Start/End: Original strand, 42072007 - 42072230
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42072007 aaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaa 42072106  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  42072107 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaac-ggattagatatcgaatcgaatgtcaaactataatcgagtt 42072205  T
Q  353 ggttcggttcattgccagccctact 377  Q
    | |||||| ||||| ||||||||||    
T  42072206 gtttcggtacattgtcagccctact 42072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 102 - 376
Target Start/End: Original strand, 26216146 - 26216411
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  26216146 aagacaaaattgtattcagcgacatttgccacatttgaattaatttttttttaaaaactaactcaaattgatttata--tataatcgataatcgagccat 26216243  T
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  26216244 ctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaa 26216343  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    ||||||||||| |||||| ||||||       || |||||||||||| ||||||||||||||||||||||||||||    
T  26216344 ccaagttcaac-ggattaaatatcg-------tgacgaactataatcaagttggttcggttcattgccagccctac 26216411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 175 - 377
Target Start/End: Complemental strand, 666046 - 665845
Alignment:
Q  175 atatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaact 274  Q
    |||||||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  666046 atatatataaacgataatcgagccatctcatgaacctaacgagtcgagctatatgtagctcaaattcagctcatttaattaacgaacttaattttcagct 665947  T
Q  275 caagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 374  Q
    |||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  665946 caagtccagctcgttaggttcatgaaccaaatttaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 665848  T
Q  375 act 377  Q
    |||    
T  665847 act 665845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 102 - 301
Target Start/End: Original strand, 15434116 - 15434315
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  15434116 aagacaaaattgtattcagccacatttgccacatttgaattaataaaatttaaaaactaactaaaattgatttatatatataatcgataatcgagccatc 15434215  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15434216 tcatgaagctaacgagtcgaactagatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 188 - 366
Target Start/End: Original strand, 45176204 - 45176381
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |||| |||||||    
T  45176204 ataatcgagtcatctcatgaacctaacgagtcgaattatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcg 45176303  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||||| |||||||||||||    
T  45176304 tttggttcatgaaccaagttcaac-ggattaattatcgagtcgaatgtcaaactataatcgagtttgttcggttcattg 45176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 102 - 246
Target Start/End: Original strand, 388859 - 389003
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    ||||||||||||||||||||  |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  388859 aagacaaaattgtattcagcgccatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 388958  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctc 246  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  388959 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctc 389003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 195 - 376
Target Start/End: Original strand, 20400962 - 20401142
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    ||||| ||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| || | ||||||| ||| ||  ||||||    
T  20400962 agccaactcattaaccaaacgagtcgaactatatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggtt 20401061  T
Q  295 catgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||| |||||  ||| ||  || |||||||||| |||||||||| ||||||||||||||||||||| || ||||||    
T  20401062 catgaaccaaattcaa-tggactaattaccgagtcgaatttcgaactatattcgagttggttcggttcattgtcaaccctac 20401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 174 - 375
Target Start/End: Complemental strand, 44422100 - 44421901
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaactt-aattttcaa 272  Q
    ||||||||||||  || ||| ||||| |||||||||| | ||||| |||||||||  ||||||||||||||||||||  ||||||||||| ||||||||     
T  44422100 tatatatataat--attatcgagccaactcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaaattttcag 44422003  T
Q  273 ctcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 372  Q
    ||||||| ||||||||| |||||||||||||||||||||| | |||  | |||| |||| |  | ||||||  ||||||||||||||||||||| |||||    
T  44422002 ctcaagttcagctcgtttggttcatgaaccaagttcaacgag-ttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgacagcc 44421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 375
Target Start/End: Original strand, 33935455 - 33935653
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaac 273  Q
    ||||||||||||  || ||| ||||| |||||| ||  | ||||| |||||||||  |||||||||||| |||||||  ||||||||||||||||||| |    
T  33935455 tatatatataat--attatcgagccaactcatggactaaccgagtcgaactatataaagctcaagttcatctcatttgtttaacgaacttaattttcagc 33935552  T
Q  274 tcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 373  Q
    |||||| ||||||||| |||||||||||||||||||||| | |||  |||||| |||| |  | ||||||  ||||||||||||| ||||||||||||||    
T  33935553 tcaagttcagctcgtttggttcatgaaccaagttcaacgag-ttaattatcgaatcgagtcccaaactattgtcgagttggttcgattcattgccagccc 33935651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 188 - 377
Target Start/End: Original strand, 3942135 - 3942323
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||  |||||| || |||||||||||||||||| |||||| |||||||||||||||| ||||||||  | ||     
T  3942135 ataatcgagtcatctcgtgaaccaaacgagccgaactacatatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttca 3942234  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    || ||||||||||||||||||||  | || |  | |||| ||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  3942235 tttggttcatgaaccaagttcaa-tgaatcaactgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtcagccctact 3942323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 273 - 369
Target Start/End: Original strand, 388990 - 389085
Alignment:
Q  273 ctcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  388990 ctcaagttcagctcgttaggttcatgaaccaagttcaacgg-attaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattgcca 389085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 200 - 375
Target Start/End: Original strand, 7447847 - 7448021
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    ||||||||||||||||| | |||| || | ||| ||||||||| |||||||||||||||||||||||||||| ||||||| | |||| || |||||||||    
T  7447847 tctcatgaacctaacgaatcgaaccatctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatga 7447946  T
Q  300 accaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||||  | |  |  | |||||||||||   |||||||| ||||||||||||||||||||| ||||||||    
T  7447947 accaagttcaa-tgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 22075024 - 22075208
Alignment:
Q  190 aatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgtt 289  Q
    |||| ||||| || ||||||| | ||||| |||||||||  || |||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||    
T  22075024 aatcgagccaactaatgaaccaatcgagtcgaactatatacagatcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatt 22075123  T
Q  290 aggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     ||||| ||||||| |||||||| | |||  | |||| |||| |    |||||| |||||||||||||||||||||||||||||||    
T  22075124 tggttcgtgaaccacgttcaacgag-ttaattgtcgaatcgagttctaaactattatcgagttggttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 222399 - 222226
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| |||||||||  ||||||||||||||||||||  |||||||| ||||||||||  |||||| ||||||||| ||||||||||    
T  222399 ctcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaa 222300  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||| ||||||| | |||  | |||| || | |  | ||||||  ||||||||||||||||||||||||||||||    
T  222299 ccaaattcaacgag-ttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 312
Target Start/End: Original strand, 10618870 - 10619004
Alignment:
Q  178 tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||| |||||| | | ||||| |||||||| | |  |||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10618870 tatattatcgattaacgagccagctcatgaagcaacagagtcgaactatatacagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 10618969  T
Q  278 gtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    || |||||| ||  |||||||||||||||||||||    
T  10618970 gttcagctcatttagttcatgaaccaagttcaacg 10619004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 234 - 376
Target Start/End: Original strand, 33124700 - 33124841
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||| ||  || || ||||||| |||||||||||||| | |||  | |||| |||| |    
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgag-ttaattgtcgaatcgagt 33124798  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
     || ||||||  |||||||||||||||||||||||||||||||    
T  33124799 ttcaaactattgtcgagttggttcggttcattgccagccctac 33124841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 369
Target Start/End: Original strand, 45055711 - 45055867
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| ||||||||| || |||||||||| |||||||| |||||||||||||| || | ||||||| | ||||||| |||||||||||||||||||||    
T  45055711 aacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaac 45055810  T
Q  312 gggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
     | | ||  || |||||||| |  |||||| || ||||||||  ||||||||||||||    
T  45055811 -gaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgcca 45055867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 46573784 - 46573612
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   | |||||||||  |||||||| ||||||| |||||||||||||| |||| |  ||| || |||||||||||    
T  46573784 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaac 46573685  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| | | |  |||||| |||||| ||||| |||  | ||||||||||||||||||||||||||||    
T  46573684 caagttcaacgag-tcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattgccagcccta 46573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 374
Target Start/End: Complemental strand, 18250133 - 18249994
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| |||||||| ||||||| | ||||||||||||||||| |  ||| || ||||||||||||||||||||||  || |  |||||| |||| |    
T  18250133 tcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacga-atcaattatcgaatcgagt 18250035  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagccct 374  Q
     | |||||||  |||||||||||||||||||||||||||||    
T  18250034 cttgaactattttcgagttggttcggttcattgccagccct 18249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 375
Target Start/End: Complemental strand, 11595965 - 11595796
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||| ||| ||||||||| || |||||| ||| |||||||| |||||||||||||| || | ||||||| | ||||||| ||||||||||||||    
T  11595965 tgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 11595866  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||| | | ||  || |||||||| |  |||||| || ||||||||  ||||||||||| ||||||||    
T  11595865 gttcaac-gaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 23227140 - 23226999
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||| || | |||||| ||||||||||||  || ||  | |||| ||||     
T  23227140 ctcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaaga-taattgtcgaatcgag 23227042  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |||||||||  |||||||||||||| ||||| |||||||||    
T  23227041 tttcgaactattgtcgagttggttcggatcattaccagcccta 23226999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 23236293 - 23236152
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||| || | |||||| ||||||||||||  || ||  | |||| ||||     
T  23236293 ctcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaaga-taattgtcgaatcgag 23236195  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |||||||||  |||||||||||||| ||||| |||||||||    
T  23236194 tttcgaactattgtcgagttggttcggatcattaccagcccta 23236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 21760755 - 21760583
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||| ||||||||| |||| ||| | |||||||||||| |||||||| |||||||  ||| |||||||||||||| |  ||| || ||||| |||||    
T  21760755 tcatgaatctaacgagtcgaaccatacgaagctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaac 21760656  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     ||||||||||  || |  |||||| |||| | |||||||||  ||||||||||||||||||||  ||||||||    
T  21760655 aaagttcaacga-atcaattatcgaatcgagtttcgaactattttcgagttggttcggttcattatcagcccta 21760583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 18740359 - 18740216
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||||| |  ||| || ||||||||||||||||| || | | | |  |||| | |||||    
T  18740359 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgag-tcaattatcaaatcgaa 18740261  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    | |||||||||  ||||||||||||||||||||||| ||||||||    
T  18740260 tctcgaactattttcgagttggttcggttcattgccggccctact 18740216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 40480220 - 40480112
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg-ttaggttcatgaacca 303  Q
    |||||| ||||||| ||||||||| || |||||||||| |||||||| |||||||||||||| || | ||||||| | ||||| || |||||||||||||    
T  40480220 tgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaacca 40480121  T
Q  304 agttcaacg 312  Q
    |||||||||    
T  40480120 agttcaacg 40480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 375
Target Start/End: Complemental strand, 49034383 - 49034224
Alignment:
Q  215 gagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggg 314  Q
    |||| ||| ||||||||| ||||||||  |||||||| || |||| ||||||||||||||||||| |  ||| || ||||||||||||||||||||| |     
T  49034383 gagtcgaattatatgtagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaac-ga 49034285  T
Q  315 attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |  |  || ||| |||||| |||||||||  ||||||||| ||||||| ||||||||||||    
T  49034284 aacaattaccgaatcgaatttcgaactattttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 375
Target Start/End: Complemental strand, 33899082 - 33898944
Alignment:
Q  236 aagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgt 335  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||| |  ||| || |||||||||||||||| |||  | | ||  | |||| |||||| |    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa-tgaactaattctcgaatcgaatat 33898984  T
Q  336 cgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||  ||||||||||||||||||||| ||||||||    
T  33898983 cgaactattttcgagttggttcggttcattgtcagcccta 33898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 17025502 - 17025361
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||||| |  ||| || ||||| |||||||||||||||| | | |  |||||| |||||    
T  17025502 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgag-tcaattatcgaatcgaa 17025404  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
      | |||||||  ||||||||||||||||||||| ||||||||    
T  17025403 ccttgaactattttcgagttggttcggttcattgtcagcccta 17025361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 33171707 - 33171534
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | |||||  ||||||||  | ||||||||| ||||||||| |||| |||||||||||| | ||||||| |||||| || ||||||| ||    
T  33171707 ctcatgaaccaaccgagtcaaactatatacaactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaa 33171608  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     ||||||||||  || ||  | ||   |||| | ||||||||| ||||||||||||||| |||||||||||||||    
T  33171607 tcaagttcaacaaga-taattgtcttatcgagtttcgaactattatcgagttggttcggatcattgccagcccta 33171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 36472444 - 36472584
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| || ||||| ||||||| ||||||||||||||||||| | |||| || ||||||||||||||||||||| | || |  |||||| |||| |    
T  36472444 tcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaac-gaatcatttatcgaatcgagt 36472542  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     || |  |||  ||||||||||||||||||||| ||||||||    
T  36472543 atcaagttattttcgagttggttcggttcattgtcagcccta 36472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 375
Target Start/End: Complemental strand, 37401742 - 37401566
Alignment:
Q  198 catctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    |||||| |||| | |||||||  ||||| || |||||||| ||||||||| ||| || ||||||||||||||||||||||||   |||| || |||||||    
T  37401742 catctcgtgaatcaaacgagtccaactacatatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcat 37401643  T
Q  298 gaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||| ||||||||||   || |  | |||| ||||||  |||||| ||||||| |||||| ||||||||| ||||||||    
T  37401642 gaatcaagttcaac-aaatcaattttcgaatcgaattacgaactctaatcgaattggtttggttcattgtcagcccta 37401566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 23237679 - 23237579
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| ||||| | | || |||||||||| |||||||||||||||||||||||| | ||||||||| | |||  ||||||||||||||||||| ||||    
T  23237679 aacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaac 23237580  T
Q  312 g 312  Q
    |    
T  23237579 g 23237579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3931064 - 3931010
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  3931064 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 3931010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 15434040 - 15434094
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  15434040 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 15434094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 42071889 - 42071943
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  42071889 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 42071943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 43052678 - 43052732
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  43052678 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 43052732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 48506136 - 48506082
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48506136 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 48506082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 26719820 - 26719960
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||| |  ||| || |||||||||||||||| |||  | |  |  |||||| |||| |    
T  26719820 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa-tgaaccaattatcgaatcgagt 26719918  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     |||||||||  ||||||||||||| ||||||| ||| ||||    
T  26719919 atcgaactattttcgagttggttcgattcattgtcagtccta 26719960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 17608671 - 17608791
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    ||||||||| |||||| |||||| | | |||||||||| || ||| ||||||||| |||| ||| || ||||||||||||||||  |||||| | ||||     
T  17608671 ataatcaagtcatctcgtgaaccaaccaagttgaactacatatagatcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctca 17608770  T
Q  288 ttaggttcatgaaccaagttc 308  Q
    || ||||||| ||||||||||    
T  17608771 tttggttcatcaaccaagttc 17608791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 388787 - 388838
Alignment:
Q  52 aacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  388787 aacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 5795275 - 5795221
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  5795275 tccaacaaaattcaattagttgtgaataaaattcataatattcttttacttttaa 5795221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 378
Target Start/End: Complemental strand, 27231725 - 27231536
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||| |||||||  ||||| || ||||| |||||| | ||| ||| || ||||||||||||||||  |||||| | ||||     
T  27231725 ataatcgagtcatctcatgaaccaaacgagtcaaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagttcaagttcggctca 27231626  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
    || | | |||||| ||||||| || | || |  |||||| ||||||  |||||| ||||  || ||||||||||||||| |||||||||||    
T  27231625 tttgatacatgaatcaagttcgac-gaatcaattatcgaatcgaattacgaactctaattaagctggttcggttcattgtcagccctactt 27231536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 30919395 - 30919505
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| |||| ||| | |||||||||||| ||||||||  ||||||  ||| |||||||||||||| |  ||| || ||||| | |||    
T  30919395 tcatgaacctaacgagtcgaaccatacgaagctcaagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttcgtaaac 30919494  T
Q  302 caagttcaacg 312  Q
    |||||||||||    
T  30919495 caagttcaacg 30919505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 15434312 - 15434353
Alignment:
Q  337 gaactataatcgagttggttcggttcattgccagccctactt 378  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15434312 gaactataatcgagttggttcggttcattgccagccctactt 15434353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 48634462 - 48634530
Alignment:
Q  244 ctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    |||||||| ||||||||||||||||| | ||||||| || ||| || ||||||||||||||||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacg 48634530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 375
Target Start/End: Original strand, 32356968 - 32357106
Alignment:
Q  236 aagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgt 335  Q
    ||||||| ||| |||| ||||||||||| ||||||||||||| | | |||| ||  ||||||||| |||||||||| | ||||  |||||| |||| | |    
T  32356968 aagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaac-gaattaattatcgaatcgagtct 32357066  T
Q  336 cgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||  |  |||||||| ||||||||| ||||||||    
T  32357067 cgaactatttttaagttggtttggttcattgtcagcccta 32357106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 46652765 - 46652631
Alignment:
Q  242 agctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaact 341  Q
    |||||||||||||||| ||||||||| | |  | |||| ||||   ||||||||||||||||||| ||||  |||||  |||||| |||||| |||||||    
T  46652765 agctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaac-agattaattatcgaatcgaatttcgaact 46652667  T
Q  342 ataatcgagttggttcggttcattgccagccctact 377  Q
    ||| |||| ||||| ||||| ||| | |||||||||    
T  46652666 atattcgaattggtccggtttattactagccctact 46652631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 31982021 - 31981979
Alignment:
Q  376 cttataagggactaaatatatgaataaatttttgtagggaaat 418  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  31982021 cttataaaggactaaatatatgaataaatttttgtagggaaat 31981979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 37250017 - 37250107
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacc 302  Q
    ||||||||||||||||| ||| ||||||| |||||| ||  |||||||| |||||||||| ||||||| | |||| || ||||||| ||||    
T  37250017 aacgagttgaactatatttagttcaagtttagctcacttggttaacgaaattaattttcagctcaagtgcggctcatttggttcattaacc 37250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 309
Target Start/End: Complemental strand, 29037953 - 29037845
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||| | ||||||| |||| |||| ||| | || |||| |||||||  |||||| |||||||||||||||||||| |  ||| || ||||||||||    
T  29037953 ctcatgaatcaaacgagtcgaaccatatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaa 29037854  T
Q  301 ccaagttca 309  Q
    | |||||||    
T  29037853 caaagttca 29037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 2466690 - 2466579
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtcc-agctcgttaggttcatga 299  Q
    |||||||||| | ||||| ||| || || ||| | ||||| |||||||||| |||||||||| |||||||| |||||||   ||||| ||| |||| |||    
T  2466690 ctcatgaaccaatcgagtcgaattacatatagtttaagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtga 2466591  T
Q  300 accaagttcaac 311  Q
    ||||||||||||    
T  2466590 accaagttcaac 2466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 10096443 - 10096550
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||| | ||||||  ||| ||||||||| | |||||||||||||||| ||| ||||||||||||     |||||| || ||| || ||||||||||    
T  10096443 ctcatgaatcaaacgagccgaattatatgtagtttaagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaa 10096542  T
Q  301 ccaagttc 308  Q
    ||||||||    
T  10096543 ccaagttc 10096550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 23223616 - 23223561
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaatt 267  Q
    ||||||| ||||||| | || |||||||||| ||||||||||||||||||||||||    
T  23223616 aacgagtcgaactatctataactcaagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 44994150 - 44994059
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    |||||| || ||||||||||||  || |||| |||||||||  | ||||| ||||||||| ||| ||| ||||||||||||||| |||||||    
T  44994150 ataatcgagtcatctcatgaacaaaatgagtcgaactatatacaactcaaattcagctcaattagttagcgaacttaattttcagctcaagt 44994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 32245391 - 32245445
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttca 242  Q
    |||||||||||||||| |||||| ||||||||||| ||||| ||| |||||||||    
T  32245391 ataatcaagccatctcgtgaaccaaacgagttgaattatatatagttcaagttca 32245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 36926796 - 36926849
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| || ||||| |||||||||||||||||||| ||||||||||||||    
T  36926796 tccaacaaaattctattagctgtgaacaaaattcataata-tcttttacttttaa 36926849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 377
Target Start/End: Complemental strand, 35543693 - 35543554
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| |||||||| |   ||| ||||||||||||||||||| |  ||| ||  |||||||||||||||||||| | || |  |||||| | || |    
T  35543693 tcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaac-gaatcaattatcgaatggagt 35543598  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
     || ||||||  ||||||||||||| ||||||| ||||||||||    
T  35543597 ctcaaactattttcgagttggttcgattcattgtcagccctact 35543554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 29527381 - 29527425
Alignment:
Q  224 tatatgtagctcaagttcagctcatttaattaacgaacttaattt 268  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||    
T  29527381 tatatatagttcaagtttagctcatttaattaacgaacttaattt 29527425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 375
Target Start/End: Original strand, 37106853 - 37106971
Alignment:
Q  256 acgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggt 355  Q
    |||||||||||||| | ||||||| | |||| || ||| ||| ||| |||||| |||  ||||  |||||| ||||||  |||||| |||| |||| |||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacga-attaattatcgaatcgaattacgaactctaattgagtcggt 37106951  T
Q  356 tcggttcattgccagcccta 375  Q
    |||||||||||||| |||||    
T  37106952 tcggttcattgccaacccta 37106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 45174986 - 45175036
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttactt 99  Q
    |||||||||| |||| ||| || |||||||||||||||||||||| |||||    
T  45174986 tccaacaaaattcaagtagctgagaacaaaattcataatattcttctactt 45175036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 45176132 - 45176162
Alignment:
Q  153 aaaaactaactcaaattgatttatatatata 183  Q
    |||||||||||||||||||||||||||||||    
T  45176132 aaaaactaactcaaattgatttatatatata 45176162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 41449792 - 41449884
Alignment:
Q  281 cagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 374  Q
    |||||| || || ||||||||||||||||||| ||| |  | |||| |||| | |||||||||  |||||||||||||| |||||| |||||||    
T  41449792 cagctcatttggatcatgaaccaagttcaacgagataat-tgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 45175059 - 45175092
Alignment:
Q  99 tttaagacaaaattgtattcagccacatttgcca 132  Q
    |||||||||||||||||||||||||||| |||||    
T  45175059 tttaagacaaaattgtattcagccacatctgcca 45175092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 7444262 - 7444294
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccaca 134  Q
    ||||||||||||||||||||||| |||||||||    
T  7444262 aagacaaaattgtattcagccacttttgccaca 7444294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 27905965 - 27906238
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  27905965 aagacaaaattgtattcagccacatttgccacatttgaattattttttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccat 27906064  T
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27906065 ctcatgagcctaacaagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaa 27906164  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27906165 ccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 102 - 371
Target Start/End: Original strand, 18880062 - 18880328
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||       ||||| ||| ||||||||||||||||||||||||| |||||| |||||||    
T  18880062 aagacaaaattgtattcaaccacatttgccacatttgaattaaattttttaaaaa-cta-ctcaaattgatttatatatataatcaataatcgagccatc 18880159  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  18880160 tcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaac 18880259  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagc 371  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18880260 caagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 29327901 - 29328183
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataa------tcgataatca 194  Q
    ||||||||||||||||||  |||||||||||||||||||||||         |||||||||||||||||||||||||||||||       |||||||||     
T  29327901 aagacaaaattgtattcaatcacatttgccacatttgaattaaattttttttaaaaactaactcaaattgatttatatatatatatatattcgataatcg 29328000  T
Q  195 agccatctcatgaacctaacgagttgaactatatgta----gctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgtta 290  Q
    || ||||||||||||||||||||| ||||||||||||    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  29328001 agtcatctcatgaacctaacgagtcgaactatatgtacgtagctcaagttaagctcatttaattaacgaacttaattttcagctcaagtccagct-gtta 29328099  T
Q  291 ggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  29328100 ggttcatgaatcaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagtttgttcggttcattgtcagcccta 29328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 22921918 - 22922053
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||| ||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22921918 aagacaaaatcgtattcagccacatttgtcacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 22922017  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaa 237  Q
    |||||||||||||||||  |||||||||||||||||    
T  22922018 tcatgaacctaacgagtctaactatatgtagctcaa 22922053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 376
Target Start/End: Complemental strand, 3801550 - 3801363
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||||||||| | |||| || | ||| ||||||||| |||||||||||||||||||||||||||| ||||||| | ||||     
T  3801550 ataatcgagtcatctcatgaacctaacgaatcgaaccatttatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctca 3801451  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    || ||||||||||||||||||||  | |  |  | |||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  3801450 tttggttcatgaaccaagttcaa-tgaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgccagccctac 3801363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 376
Target Start/End: Original strand, 31620822 - 31621009
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| |||||  |||| |||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||| || |||| || |||     
T  31620822 ataatcgagccaagtcattaaccaaacgagtcgaattatatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactca 31620921  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    ||||||||||||||||| |||||  ||| ||  | ||||||||||| |||||||||| || |||||||||||||||||| |||||||||    
T  31620922 ttaggttcatgaaccaaattcaa-tggactaattgtcgagtcgaatttcgaactatattcaagttggttcggttcattgtcagccctac 31621009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 381
Target Start/End: Complemental strand, 38523035 - 38522855
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    ||||||||||| ||||| | |||| || | ||| |||||||||||||||||||||||||||||||||||||| |||||||   |||| || |||||||||    
T  38523035 tctcatgaacccaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatga 38522936  T
Q  300 accaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttata 381  Q
    |||||||||||  |||  |  ||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  38522935 accaagttcaa-tggaccaattatcgagtcaaattacgaactatattcgagttggttcggttcattgccagccctacatata 38522855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 188 - 376
Target Start/End: Original strand, 15933114 - 15933304
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaatt---ttcaactcaagtccagc 284  Q
    |||||| ||| | |||||||||| ||||||| |||| || | |||||||||||| ||||||||| ||||||||||||||    || | |||| || || |    
T  15933114 ataatcgagctaactcatgaaccaaacgagtcgaaccatctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaac 15933213  T
Q  285 tcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    || |||||||||||||||||||||||||  ||||  | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  15933214 tcattaggttcatgaaccaagttcaacga-attaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgccagccctac 15933304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 178 - 375
Target Start/End: Complemental strand, 1840883 - 1840687
Alignment:
Q  178 tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||| |||||| ||| ||||| || ||||||| | ||||  |||||||||  | ||||||||||||||||||| || |||||||||||||||| |||||    
T  1840883 tatattatcgattatcgagccagcttatgaaccaaccgagccgaactatatacatctcaagttcagctcatttatttcacgaacttaattttcagctcaa 1840784  T
Q  278 gtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || |||||| || |||||||||||||||||||||| | |||  | |||| | || |   |||||||  |||||||||||||||||||||||| |||||    
T  1840783 gttcagctcatttggttcatgaaccaagttcaacgag-ttaattgtcgaattgagttctgaactattgtcgagttggttcggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 27450753 - 27450581
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| | || ||| ||||||||| |||||||| ||||||| ||||||||| ||||||||| |  ||| |||||||||||||     
T  27450753 tcatgaaccaaacgagtcgaaccacatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaat 27450654  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||| |||||||  || |  |||||| |||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  27450653 caaattcaacga-atcaattatcgaatcgaatctcgcactattttcgagttggttcggttcattgccagcccta 27450581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 39407374 - 39407546
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||| ||||||||| |||||||| ||||||| ||||||||| ||||||||| |  ||| |||||||||||||     
T  39407374 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaat 39407473  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||||  || |  |||||| |||||| ||| |||||  | |||||||||||||||||| |||||||||    
T  39407474 caagttcaacga-atcaattatcgaatcgaatctcgcactatttttgagttggttcggttcattaccagcccta 39407546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 198 - 377
Target Start/End: Original strand, 20188937 - 20189115
Alignment:
Q  198 catctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    |||||| |||||| ||||||| |||||| || |||||||||||||||||| ||| || |||||||||||||| |  |||||| | |||| || |||||||    
T  20188937 catctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcat 20189036  T
Q  298 gaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||||||||||| || | || |  |||||| || |||  |||||| ||||||||||| |||||||||||| ||||||||||    
T  20189037 gaaccaagttcgac-gaatcaattatcgaatcaaattacgaactctaatcgagttgattcggttcattgtcagccctact 20189115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 10493953 - 10494125
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||||||| ||||||| ||||||||||||||||||| |  ||| || ||||  |||||    
T  10493953 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaac 10494052  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | |  |  ||| || |||||| || ||||||  | ||||||||||||||||||||||||||||    
T  10494053 caagttcaac-gaaccaattattgaatcgaatatcaaactatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 34719829 - 34719657
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||| ||||||||| |||||||| ||||||| ||||||||| ||||||||| |  ||| ||| |||||||||     
T  34719829 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaat 34719730  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||||  || |  |||||| || ||| ||| |||||  ||||||||||||| ||||||||||||||||    
T  34719729 caagttcaacga-atcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcattgccagcccta 34719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 376
Target Start/End: Original strand, 26218018 - 26218188
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| ||||||||| || |||||||| | |||||||| |||||||||||||| || | ||||||| | ||||||| ||||||||||||||    
T  26218018 tgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 26218117  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    ||||||| | | ||  || |||||||| |  |||||| || | ||||||  |||||||||||||||||||||    
T  26218118 gttcaac-gaactaattaccgagtcgagttccgaactttatttgagttgtatcggttcattgccagccctac 26218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 19282310 - 19282176
Alignment:
Q  178 tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||| |||||| ||| | ||| |||||||| | | ||||| |||||||||  || ||||||||||||||| || ||||||||| ||||||||| |||||    
T  19282310 tatattatcgattatcgaaccagctcatgaatcaaccgagtcgaactatatacagttcaagttcagctcatctacttaacgaacctaattttcagctcaa 19282211  T
Q  278 gtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    || |||||| || ||||||||||||||||||||||    
T  19282210 gttcagctcatttggttcatgaaccaagttcaacg 19282176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 378
Target Start/End: Complemental strand, 14500875 - 14500703
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| || |||||| || |||||||||| |||||| | |||||||||||||| || | ||||||| | ||||||| ||||||||||||||    
T  14500875 tgaaccaaacgagtcgagctatatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 14500776  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
    ||||||||  | ||  ||||||||||| |  |||||| || ||||||||  |||||||||| |||||| |||||    
T  14500775 gttcaacga-actaattatcgagtcgagttccgaactgtattcgagttgtatcggttcatttccagccttactt 14500703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 26298279 - 26298451
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||| | ||||||| |||||||| ||||||| ||||||||| |||||||||    ||| |||||||||||||     
T  26298279 tcatgaaccaaacgagtcgaaccatatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaat 26298378  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | || |  |||||| |||||| ||  |||||  | ||||||||||||||||||||||||||||    
T  26298379 caagttcaac-gaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcattgccagcccta 26298451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 32157123 - 32157032
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    |||||| || |||||||||||| |||||| | |||| || | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32157123 ataatcgagtcatctcatgaacttaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcaactcaagt 32157032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 375
Target Start/End: Original strand, 31021830 - 31022003
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||| | ||||||  ||||||| | ||||| || ||||||||||||| ||||| ||||||||||  | ||||| | |||||| || ||||||||||    
T  31021830 ctcatgaatcaaacgagacgaactatgtatagcttaaattcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaa 31021929  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||  |||||| | |||  ||||||||||| |  ||||||||| ||||||||||||||||||||| ||| ||||    
T  31021930 ccaaactcaacgag-ttaattatcgagtcgagttccgaactatattcgagttggttcggttcattgtcagtccta 31022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 188 - 369
Target Start/End: Complemental strand, 20190770 - 20190591
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||| ||||| | |||||| || |||||||||||||||||| |||   | ||||||||||||| | ||||||| | ||||     
T  20190770 ataatcgagtcatctcatgaaccaaacgattcgaactacatatagctcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctca 20190671  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    || |||||||||||||||||| |  | || |  |||||| ||||||  |||||| |||| ||||||||||||||||||||||    
T  20190670 tttggttcatgaaccaagttcga-tgaatcaattatcgaatcgaattacgaact-taatagagttggttcggttcattgcca 20190591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 365
Target Start/End: Original strand, 39414169 - 39414312
Alignment:
Q  222 actatatgtagctcaagttcagctcatttaattaacgaacttaattttcaac-tcaagtccagctcgttaggttcatgaaccaagttcaacgggattaga 320  Q
    ||||||| || ||||||||||||||||||| ||||||||||||||||| ||| | |||| |||||| ||||||||||| ||||||||||||| | |||      
T  39414169 actatatataactcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgag-ttaat 39414267  T
Q  321 tatcgagtcgaatgtcgaactataatcgagttggttcggttcatt 365  Q
    | |||| |  | | |||||||||  ||||||||||||||||||||    
T  39414268 tgtcgaattaagtttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 372
Target Start/End: Original strand, 26299815 - 26299984
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||| | ||||||| |||| |||| ||| |||||||||  ||||||| ||||||| ||||||||| |||||||||    ||| |||||||||||||     
T  26299815 tcatgaatcaaacgagtcgaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaat 26299914  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 372  Q
     ||||||||||  || |  |||||| |||||| ||| |||||  |||||||||||||||||||| ||||||    
T  26299915 gaagttcaacga-atcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatttccagcc 26299984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 376
Target Start/End: Original strand, 27196073 - 27196218
Alignment:
Q  230 tagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtc 329  Q
    ||||||||||||| ||| ||||  |||||| ||||||||||||||||||| |  ||| || |||||||||||||| || ||| | || |  |||||| ||    
T  27196073 tagctcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaac-gaatcaattatcgaatc 27196171  T
Q  330 gaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    || | |||||||||  ||||||||||||||||||||| |||||||||    
T  27196172 gagtctcgaactattttcgagttggttcggttcattgtcagccctac 27196218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 34723825 - 34723715
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||| ||||||||| |||||||| ||||||| ||||||||| ||||||| | |  ||| |||||||||||||     
T  34723825 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaat 34723726  T
Q  302 caagttcaacg 312  Q
    |||||||||||    
T  34723725 caagttcaacg 34723715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 375
Target Start/End: Original strand, 41783296 - 41783465
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| |||| || |||||| || || |||||||||| |||||||| |||||||||||||| || | ||||||| | |||| || ||||||||||||||    
T  41783296 tgaaccaaacgggtcgaactacatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaa 41783395  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||| | | ||  || |||||||| |  |||||| || ||||||||  ||||||||||| ||||||||    
T  41783396 gttcaac-gaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 11136173 - 11136069
Alignment:
Q  207 aacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagt 306  Q
    |||| ||||||| ||||||||| || |||||||||| |||||||| |||||||||||||| || | ||||||| | ||||||| ||||| ||||||||||    
T  11136173 aaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagt 11136075  T
Q  307 tcaacg 312  Q
    ||||||    
T  11136074 tcaacg 11136069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 375
Target Start/End: Complemental strand, 32945195 - 32945021
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    ||||||||||  |||||||||||||||   || ||| ||||| ||||||||| || |||| |||||||||  |||||||| |  ||| || |||||||||    
T  32945195 tctcatgaacaaaacgagttgaactatgcataactccagttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatga 32945096  T
Q  300 accaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||| ||| | || |  || ||| |||| | |||||||||  ||||||||||||||||||||| ||||||||    
T  32945095 accaagtttaac-gaatcaattaccgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 32945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 18879986 - 18880040
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  18879986 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 18880040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 22921842 - 22921896
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  22921842 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 22921896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 27905889 - 27905943
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27905889 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 27905943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 29327825 - 29327879
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  29327825 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 29327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 39409108 - 39409206
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    ||||||||| ||||||| |||| |||| ||| ||||||||| |||||||| ||||||| ||||||||| ||||||||| |  ||| |||||||||||||    
T  39409108 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 19716151 - 19716318
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| |||||||  ||| |||| ||| |||||||||  ||||||| ||||||| ||||||||| |||| |||| |  ||| |||||||||||||     
T  19716151 tcatgaaccaaacgagtcaaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaat 19716250  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | || |  ||     |||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  19716251 caagttcaac-gaatcaatta-----tcgaatctcgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 34857315 - 34857487
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||| | ||||| | |||||||| ||||||| ||||||||| ||||||||| |  ||| |||| ||||||||     
T  34857315 tcatgaaccaaacgagtcgaaccatatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaat 34857414  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | || |  ||| || | |||| ||  |||||  |||||||||||||||||||||||| |||||    
T  34857415 caagttcaac-gaatcaattattgaattgaatctcacactattttcgagttggttcggttcattgccaacccta 34857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 310
Target Start/End: Complemental strand, 30661079 - 30660971
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||| ||| ||| ||||  ||||| |||||||| |||||||||||||||| || | |||||| ||  ||||||||||    
T  30661079 tcatgaaccaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaac 30660980  T
Q  302 caagttcaa 310  Q
     ||||||||    
T  30660979 taagttcaa 30660971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 1225318 - 1225429
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| ||||||| ||| |||| |||| |||||||| | ||||||| || |||| ||||||||||||||||||| |  ||| || ||||||| ||    
T  1225318 ctcatgaaccaaacgagtcgaattatacgtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaa 1225417  T
Q  301 ccaagttcaacg 312  Q
    | ||||||||||    
T  1225418 ctaagttcaacg 1225429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 375
Target Start/End: Complemental strand, 34724891 - 34724754
Alignment:
Q  237 agttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtc 336  Q
    |||||| |||||||| ||||||| ||||||||| ||||||||| |  ||| ||||||||||||| |||||||||| | || |  |||| | |||||| ||    
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaac-gaatcaattatcaaatcgaatctc 34724793  T
Q  337 gaactataatcgagttggttcggttcattgccagcccta 375  Q
      |||||  || |||||||||||||||||||| ||||||    
T  34724792 acactattttcaagttggttcggttcattgccggcccta 34724754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 3457793 - 3457861
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaatttt 269  Q
    |||||||||| |||||||   ||||||| |||||||||| || |||||||| |||||||||||||||||    
T  3457793 ctcatgaaccaaacgagtcagactatatatagctcaagtccaactcatttatttaacgaacttaatttt 3457861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 40056497 - 40056382
Alignment:
Q  240 tcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaa 339  Q
    |||||||||||| ||||||||||||||||||| ||||| |  | ||  || |||||||||||||| ||||||| || ||  | |||| |||||| || ||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgaga-taattgtcgaatcgaatttcaaa 40056399  T
Q  340 ctataatcgagttggtt 356  Q
    |||| ||||||||||||    
T  40056398 ctattatcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 36523719 - 36523831
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaac----gaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    ||||||||| ||||| |  |||||||  |||||||||||||||||||||| |||||     ||||||||||| || |||||| |  ||| || |||||||    
T  36523719 tcatgaaccaaacgaatcaaactatacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcat 36523818  T
Q  298 gaaccaagttcaa 310  Q
    |||||||||||||    
T  36523819 gaaccaagttcaa 36523831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 43386694 - 43386769
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    |||||||||| |||||||||||| || | || ||||||||||  ||||||| |||| |||||||||||||| ||||    
T  43386694 ctcatgaaccaaacgagttgaaccatctataactcaagttcaattcatttatttaaagaacttaattttcagctca 43386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 28431034 - 28431108
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    ||||||||| ||||| ||||||  ||| ||| ||||||||||||| |||| ||||||  ||||||||||||||||    
T  28431034 tcatgaaccaaacgatttgaaccttatttagttcaagttcagctcgtttatttaacgggcttaattttcaactca 28431108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 30051422 - 30051497
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||||||  ||||||| ||||||||| ||| ||| ||||  ||||| |||||||| ||||||||||||| |||||    
T  30051422 tcatgaactaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcatctcaa 30051497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 32156995 - 32156944
Alignment:
Q  326 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||||||||  ||||||||| |||| ||||||||||||||||| |||||||||    
T  32156995 agtcgaattacgaactatattcgaattggttcggttcattgcgagccctact 32156944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 39409212 - 39409266
Alignment:
Q  321 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||| |||||| ||| |||||  |||||||||||||||||||| |||||||||    
T  39409212 tatcgaatcgaatctcgcactattttcgagttggttcggttcattaccagcccta 39409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 4983475 - 4983414
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaat 266  Q
    |||||| ||||| |||||||| || || |||||||||| ||| |||| ||||||||||||||    
T  4983475 tgaaccaaacgaattgaactacatataactcaagttcaactcctttagttaacgaacttaat 4983414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 102 - 375
Target Start/End: Complemental strand, 12789824 - 12789552
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    ||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  12789824 aagacaaaattgtattcagccacatttgccacatttgaaataatttttttaaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 12789725  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||    
T  12789724 tcattttcctaactagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaac 12789625  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12789624 caagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 114 - 375
Target Start/End: Original strand, 53369752 - 53370012
Alignment:
Q  114 tattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaa 213  Q
    |||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53369752 tattcaaccacatttgccacatttgaattaaaattttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaa 53369851  T
Q  214 cgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgg 313  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  53369852 cgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-g 53369950  T
Q  314 gattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53369951 gattaaatatcgagttgaatgtcgaactataatcgagttggttcggttcattgccagcccta 53370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 19852846 - 19853118
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||| ||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19852846 aagagaaaattgtattaagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 19852945  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  19852946 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaac 19853045  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  19853046 caagttcaac-ggattaaatatcgagtcgaatgtcaaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 153 - 376
Target Start/End: Original strand, 45674754 - 45674976
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  45674754 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaa 45674853  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  45674854 ttaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgac-ggattagatatcgagtcgaatgtcgaactataatcgagtt 45674952  T
Q  353 ggttcggttcattgccagccctac 376  Q
    ||||||||||||||||||||||||    
T  45674953 ggttcggttcattgccagccctac 45674976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 153 - 376
Target Start/End: Original strand, 50605927 - 50606149
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  50605927 aaaaactaactcaaattgatttatatatataatcaataatcgagccatctcataaacctaacgagtcgaactatatgtagctcaagttcagctcatttaa 50606026  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  50606027 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgaatt 50606125  T
Q  353 ggttcggttcattgccagccctac 376  Q
    ||||||||||||||||||||||||    
T  50606126 ggttcggttcattgccagccctac 50606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 48977444 - 48977716
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    ||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  48977444 aagacaaaattgtattcggccacatttgccacatttgaattaaaaaaaattaaaaactaactcaaattgatttatatatataatcgataatcgagctatc 48977543  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||||||||||    
T  48977544 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaac 48977643  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     ||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48977644 gaagttcaac-gaattaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcattgccagcccta 48977716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 165 - 375
Target Start/End: Original strand, 21441512 - 21441721
Alignment:
Q  165 aaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaactta 264  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21441512 aaattgatttatatatataatcaataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaactta 21441611  T
Q  265 attttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 364  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21441612 attttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 21441710  T
Q  365 tgccagcccta 375  Q
    || || |||||    
T  21441711 tgtcaacccta 21441721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 153 - 362
Target Start/End: Complemental strand, 44791464 - 44791256
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  44791464 aaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaaattcagctcatttaa 44791365  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44791364 ttaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagtt 44791266  T
Q  353 ggttcggttc 362  Q
    ||||||||||    
T  44791265 ggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 102 - 328
Target Start/End: Original strand, 49820852 - 49821075
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||  |||||||||||||| |||||||    
T  49820852 aagacaaaattgtattcagccacatttgtcacatttgaattaaatttttttaaaaactaactcaaattgatttata--tataatcgataatcgagccatc 49820949  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  49820950 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaac 49821049  T
Q  302 caagttcaacgggattagatatcgagt 328  Q
    |||||||||| |||||| |||||||||    
T  49821050 caagttcaac-ggattaaatatcgagt 49821075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 97 - 286
Target Start/End: Original strand, 53369551 - 53369740
Alignment:
Q  97 cttttaagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaag 196  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||    
T  53369551 ctttcaagacaaaattgtattcaaccacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcgataatcgag 53369650  T
Q  197 ccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctc 286  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53369651 ccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 53369740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 188 - 375
Target Start/End: Original strand, 9469731 - 9469917
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||||||||| | |||| || | ||| |||||||||||||||||||| ||||||||||||||||| |||||||   ||||     
T  9469731 ataatcgagtcatctcatgaacctaacgaatcgaaccatctatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctca 9469830  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || ||||||||||||||||||||   ||  |  | |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||    
T  9469831 tttggttcatgaaccaagttcaa-tagaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgtcagcccta 9469917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 11055399 - 11055226
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| |||||||||  ||||||||||| ||||||||| ||||||||||||||||||  ||||||| |||||| || ||||||||||    
T  11055399 ctcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaa 11055300  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | | |||  |||||| |||| |  ||||||||  ||||||||||||||||||||| ||||||||    
T  11055299 ccaagttcaatgag-ttaattatcgaatcgagttccgaactattgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 375
Target Start/End: Original strand, 22184445 - 22184643
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaac 273  Q
    ||||||||||||  || ||| ||||| || ||||||| |  |||| |||||||||  || |||||||||||||||||  ||||||||||||||||||| |    
T  22184445 tatatatataat--attatcgagccaacttatgaaccaactgagtcgaactatataaagttcaagttcagctcatttgtttaacgaacttaattttcagc 22184542  T
Q  274 tcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 373  Q
    |||||| ||||||||| |||||||||||||||||||||| | |||  | |||| |||| |  | ||||||  ||||||||||||||||||||||||||||    
T  22184543 tcaagttcagctcgtttggttcatgaaccaagttcaacgag-ttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagccc 22184641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 24008075 - 24007903
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  24008075 tcatgaaccaaacgagtcgaaccatatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaac 24007976  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | || |   ||| | |||||| |||||||||  ||||||||||||  ||||||| ||||||||    
T  24007975 caagttcaac-gaatcaatcatcaaatcgaatctcgaactattttcgagttggttcaattcattgtcagcccta 24007903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 188 - 381
Target Start/End: Original strand, 36543735 - 36543927
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||||||| | | |||| || | ||| |||||||||||||||||||||||||||||||||||||| |||||||   |||      
T  36543735 ataatcgagtcatctcatgaacctaacaaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctta 36543834  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttata 381  Q
    || ||||||||||||||||||||  |||  |  | |||||||||||  ||||||||| |||||||||||| |||||||| |||||||| |||||    
T  36543835 tttggttcatgaaccaagttcaa-tggaccaattgtcgagtcgaattacgaactatattcgagttggttcagttcattgtcagccctatttata 36543927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 376
Target Start/End: Complemental strand, 48731352 - 48731172
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    |||||||| ||||||| || || ||||||||| | ||  |||||| ||||||||||||||||||||||||||||| | ||||||| ||| |  || ||||    
T  48731352 agccatcttatgaaccaaatgaattgaactatctataattcaagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggtt 48731253  T
Q  295 catgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||| |||||  |||  |  | ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  48731252 catgaaccaaattcaa-tggaccaattgtcgagtcgaatttcgaactatattcgagttggttcggttcattggcagccctac 48731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 174 - 312
Target Start/End: Original strand, 52813543 - 52813679
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaac 273  Q
    ||||||||||||  || ||| ||||| |||||||||| | ||| | |||||||||  ||||||||||||||||||||  ||||||||||||||||||| |    
T  52813543 tatatatataat--atcatcgagccaactcatgaaccaaccgaatcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagc 52813640  T
Q  274 tcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    | |||| ||||||||| ||||||||||||||||||||||    
T  52813641 ttaagttcagctcgtttggttcatgaaccaagttcaacg 52813679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 222 - 375
Target Start/End: Original strand, 26632924 - 26633076
Alignment:
Q  222 actatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagat 321  Q
    ||||||||||  |||||||| ||||||||| ||||||||||||||||||| ||||||| |||||| || |||| |||| |||||||||||| | |||  |    
T  26632924 actatatgtaattcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgag-ttaatt 26633022  T
Q  322 atcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     |||| |||| |  |||||||| |||||||||||||||||||||||| ||||||    
T  26633023 gtcgaatcgagttacgaactattatcgagttggttcggttcattgccggcccta 26633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 375
Target Start/End: Complemental strand, 50147104 - 50146918
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||  |||||| || || || |||||||||||| ||| || |||||||||||||||| ||||||||| | ||     
T  50147104 ataatcgagtcatctcgtgaaccaaacgagccgaactacatataacttaagttcagctcaattagttcacgaacttaattttcagctcaagtccggttca 50147005  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || ||||||||||||||||||||| | || |  | |||| ||||||  |||||| ||||||| ||||||||||||||||| |||||||    
T  50147004 tttggttcatgaaccaagttcaac-gaatcaattgtcgaatcgaattacgaactttaatcgaattggttcggttcattgctagcccta 50146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 80465 - 80637
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||| |||| |||| |||||||| ||||||||| || |||| ||||||||||||||||||| |  ||| || |||||||||||    
T  80465 tcatgaaccaaacgagtcgaattatacgtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaac 80564  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | |  |  || ||| || ||| |||||||||  ||||||||| ||||||||||||||||||||    
T  80565 caagttcaac-gaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 366
Target Start/End: Complemental strand, 36156463 - 36156303
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| |||||| || ||| |||||||||||||| ||| || |||||||||||||||| ||||||| | |||| || |||||| |||||||    
T  36156463 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaa 36156364  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    ||||||| | || |  | |||| ||||||  |||||| ||||||||||||||||||||||||    
T  36156363 gttcaac-gaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattg 36156303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 369
Target Start/End: Complemental strand, 12673200 - 12673034
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   | |||||||||  |||||||| |||| || ||||||||||||||||||| |  ||| || |||||||||||    
T  12673200 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaac 12673101  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    ||||||||||| | | |  |||||| |||||| |||||||||  ||||||||||||||||||||||||    
T  12673100 caagttcaacgag-tcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgcca 12673034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 376
Target Start/End: Complemental strand, 48339274 - 48339098
Alignment:
Q  199 atctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatg 298  Q
    ||||| |||||| ||||||| |||||| || ||||| |||||||||||| ||| || |||||||||||||||| ||||||| |  ||| || | ||||||    
T  48339274 atctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatg 48339175  T
Q  299 aaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||||||   || || | |||| ||||||  |||||| |||| ||||||||||| ||||||| |||||||||    
T  48339174 aaccaagttcaac-aaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagccctac 48339098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 201 - 376
Target Start/End: Complemental strand, 15697256 - 15697082
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| ||||||| | ||||| | ||| ||| |||||||||||| | ||||||||||||||||| | ||||||| |||||  || ||||||||||    
T  15697256 ctcatgaaccaaacgagtcggactatgtttagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaa 15697157  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
     |||||||||| | || |  | ||||||||| | ||||||| || ||||||||  ||||||||||| |||||||||    
T  15697156 tcaagttcaac-gaatcaattgtcgagtcgagtctcgaactttattcgagttgtctcggttcattgtcagccctac 15697082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 19455327 - 19455220
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||| ||| ||||| ||| ||||||||||||| ||||||||  |||| ||||||||||||||||||||| |||||| || | ||||||||||||    
T  19455327 tgaaccaaacaagtcgaactgtatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaa 19455228  T
Q  305 gttcaacg 312  Q
    ||||||||    
T  19455227 gttcaacg 19455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 234 - 369
Target Start/End: Original strand, 51995078 - 51995212
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| ||| |||| ||||| ||||||||||| | ||||||| | |||| || ||||||||||||||||||||| | ||||  |||||| |||| |    
T  51995078 tcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaac-gaattaattatcgaatcgagt 51995176  T
Q  334 gtcgaactataatcgagttggttcggttcattgcca 369  Q
     |||||||||  ||||||||||||||||||||||||    
T  51995177 ctcgaactattttcgagttggttcggttcattgcca 51995212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 377
Target Start/End: Complemental strand, 28265843 - 28265671
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| ||||||| |||||| |  | ||||||||||| |||||||  || |||||||||||||| ||||||  | |   ||||| ||||||||||    
T  28265843 ctcatgaaccaaacgagtcgaactacacttggctcaagttcaactcatttgtttgacgaacttaattttaaactcagattc---tcgtttggttcatgaa 28265747  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    ||||||||||||  ||||  || ||| |||| | |||||||||  |||||||||||| |||||||||||||||||||    
T  28265746 ccaagttcaacga-attaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagccctact 28265671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 55892157 - 55891985
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||| ||||||||||  | ||||||||||| |||||||  || |||||||||||||| ||| || || |  |||||| |||||||||||    
T  55892157 tcatgaaccaaacgaattgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaac 55892058  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | ||||  || ||| |||| | |||||||||  | |||||||||| |||||||| ||||||||    
T  55892057 caagttcaac-gaattaattaccgaatcgagtctcgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 312
Target Start/End: Original strand, 52706195 - 52706295
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| ||||||||| || |||||||||| |||||||| |||||||||||||| || | ||||||| | ||||||| ||||||||||||||||| |||    
T  52706195 aacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaac 52706294  T
Q  312 g 312  Q
    |    
T  52706295 g 52706295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 307
Target Start/End: Complemental strand, 6866261 - 6866170
Alignment:
Q  216 agttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagtt 307  Q
    |||||||||| || |||||||||||||||||| ||| || |||||||||||||||| ||||||| | |||| || |||||||||||||||||    
T  6866261 agttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtt 6866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 366
Target Start/End: Complemental strand, 49083385 - 49083243
Alignment:
Q  223 ctatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagata 322  Q
    |||||| || ||||||| |||||||||||||||||||| ||||||||||  |||||| || ||| ||||||| ||||||||||||||||  || ||  ||    
T  49083385 ctatatataactcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaac-agactaatta 49083287  T
Q  323 tcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    ||||||| ||| || ||||||  || |||||||||| |||||||    
T  49083286 tcgagtccaatttcaaactattctcaagttggttcgattcattg 49083243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 44378218 - 44378328
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    |||||||||  |||||| ||| ||||  ||||||||||||| |||||||| ||||||| ||||||||||||| ||| | || ||| || |||||||||||    
T  44378218 tcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaac 44378317  T
Q  302 caagttcaacg 312  Q
    |||||||||||    
T  44378318 caagttcaacg 44378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 40797798 - 40797970
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   || ||||||||| |||||||| ||||||| ||||||||||||||||||| |  ||| || |||||||||||    
T  40797798 tcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaac 40797897  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||  | |  |  |||||| || | | |||||||||  | ||||||||||||||||||||||| ||||    
T  40797898 caagttcaa-tgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcattgccagtccta 40797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 46944716 - 46944544
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   | |||||||||  || ||||| ||||||| ||||| ||||||||||||| |  ||| || |||||||||||    
T  46944716 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaac 46944617  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| |   |  |||||| |||||| |||||||||  | ||||||||||||||||||| ||||||||    
T  46944616 caagttcaacgag-ccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagcccta 46944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 381
Target Start/End: Original strand, 56224135 - 56224291
Alignment:
Q  224 tatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatat 323  Q
    ||||| ||| ||||||||| || |||||||||||||| |||||||||| ||||||| | |||| || |||| || ||||||||||||| | ||||  | |    
T  56224135 tatatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaac-gaattaattgt 56224233  T
Q  324 cgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttata 381  Q
     ||||| | | |||||||||  | ||||||||||||||||||| |||||||| |||||    
T  56224234 tgagtcaagtttcgaactatgtttgagttggttcggttcattgtcagccctaattata 56224291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 1803468 - 1803576
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||||| ||||||| |||| |||| ||| ||||||||| |||||||| ||||||| ||||||||| ||||||||| |  ||| ||||||||||||| ||    
T  1803468 atgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatca 1803567  T
Q  304 agttcaacg 312  Q
    |||| ||||    
T  1803568 agtttaacg 1803576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 22721296 - 22721403
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||| || |||||||||| |||||||| ||||||||||||||||| | || ||||    |||||| |||||||||||    
T  22721296 tcatgaaccaaacgagtcgaactatatataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaac 22721394  T
Q  302 caagttcaa 310  Q
    |||||||||    
T  22721395 caagttcaa 22721403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 25134542 - 25134646
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   || ||||||||| |||||||| ||||||||||||||||||||||||||| |  ||| || |||||||||||    
T  25134542 tcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaac 25134641  T
Q  302 caagt 306  Q
    |||||    
T  25134642 caagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 378
Target Start/End: Complemental strand, 48151298 - 48151123
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| | ||| || ||||||||  | |||||||||  || ||||| ||||||||||||||||||| ||||||| |||||| || ||||  |||||    
T  48151298 tcatgaaccaaccgaattaaactatatacaactcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaac 48151199  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
    ||||||||||  || ||  | |||| |||| | |||||||||  |||||||||||||  ||||||| ||||||||||    
T  48151198 caagttcaacaaga-taattgtcgaatcgagtttcgaactattgtcgagttggttcgaatcattgcaagccctactt 48151123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 12789900 - 12789846
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12789900 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 12789846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 19850521 - 19850575
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19850521 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 19850575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 45674636 - 45674690
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  45674636 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 45674690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 53369480 - 53369534
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  53369480 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 53369534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 49820778 - 49820830
Alignment:
Q  51 caacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  49820778 caacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 49820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 16742498 - 16742423
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    |||||||||| | ||| | |||||||||  | ||||||||||||||||||| ||||||||||||||||||||||||    
T  16742498 ctcatgaaccaatcgaatcgaactatatacaactcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 375
Target Start/End: Complemental strand, 48802650 - 48802475
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    |||| |||||| ||||||| |||||||   |||||||||||| ||||||||| || |||| |||||||||| |||||||| |  ||| || |||||||||    
T  48802650 tctcgtgaaccaaacgagtcgaactattcatagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatga 48802551  T
Q  300 accaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |||||||||    || |   | | | |||| | |||||||||  ||||||||||||||||||||| ||||||||    
T  48802550 atcaagttcaaaaaaatcaataaccaaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 48802475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 7505517 - 7505607
Alignment:
Q  222 actatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||| || |||||||||| |||||||| |||||||| |||||||| | ||||||| | |||| || |||||||||| |||||||||||    
T  7505517 actatatataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacg 7505607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 44791582 - 44791528
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  44791582 tccaacaaaatttaattagttgtgaacaaaattcataatattcttttacttttaa 44791528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 378
Target Start/End: Complemental strand, 51408110 - 51407946
Alignment:
Q  213 acgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    |||||| ||||||||  | | ||||||||| |||||||  || |||||||||||||| ||| || || |  ||| || ||||||||||||||||| ||||    
T  51408110 acgagtcgaactatacttggttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacg 51408011  T
Q  313 ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
      ||||  || ||| |||| | |||||||||  |||||||||||| |||||||| |||||||||||    
T  51408010 a-attaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgtcagccctactt 51407946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 43812243 - 43812123
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||  ||||||| |||||| || ||| |||||||||||||| ||| || ||||||||||||||||  | |||| | || |     
T  43812243 ataatcgagtcatctcgtgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggccca 43812144  T
Q  288 ttaggttcatgaaccaagttc 308  Q
    || ||||||||||||||||||    
T  43812143 tttggttcatgaaccaagttc 43812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 27891354 - 27891464
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| |||||||||  |  |||| ||||||||||||| ||||| || || ||||||| ||||||| |||||| ||  |||||||||    
T  27891354 ctcatgaaccaaccgagtcgaactatataaaattcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcatt-tgttcatgaa 27891452  T
Q  301 ccaagttcaacg 312  Q
    ||||||||||||    
T  27891453 ccaagttcaacg 27891464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 375
Target Start/End: Complemental strand, 49405797 - 49405635
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| |||||||   || ||||||||| ||||||||| || |||| |||||||||| | |||||| |  ||| || ||||||| |||||||||||||    
T  49405797 aacgagtcgaactatccataactcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaac 49405698  T
Q  312 gggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     | || |  || ||| |||| | |||||||||  ||| ||||||||||||||||| ||||||||    
T  49405697 -gaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcccta 49405635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 27285617 - 27285678
Alignment:
Q  215 gagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    |||| ||||||||| ||||||||||| | |||||||||||||| |||| |||||||||||||    
T  27285617 gagtcgaactatatatagctcaagtttaactcatttaattaacaaactaaattttcaactca 27285678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 38493147 - 38493075
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    ||||||| |||||||  || ||||| || |||||||||| |||||||||||||| ||||||||||||| ||||    
T  38493147 atgaaccaaacgagtcaaattatatataactcaagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 43798396 - 43798285
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| ||||||| ||||||||  ||||||||||||| |||||||| |||| || ||| |||||  |||||||  |  ||| || |||||| |||    
T  43798396 ctcatgaaccaaacgagtcgaactatacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaa 43798297  T
Q  301 ccaagttcaacg 312  Q
    || |||||||||    
T  43798296 ccgagttcaacg 43798285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 366
Target Start/End: Complemental strand, 32397884 - 32397707
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||| | ||||||| || ||| || ||| |||||||||||||| ||| || |||||||||||||| |  |||||| | |||      
T  32397884 ataatcgagtcatctcgtgaatcaaacgagtcgagctacatatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctta 32397785  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    || | ||||||||||||||||  | | || |  | |||||||||||  |||||| ||||||| ||||||||||| ||||    
T  32397784 tttgattcatgaaccaagttcggc-gaatcaattgtcgagtcgaattacgaactttaatcgaattggttcggtttattg 32397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 43387210 - 43387305
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttca 271  Q
    ||||||||||||  || ||| ||||| |||||||||| | ||||| |||||||||  || |||||||||||||||||  |||||| | ||||||||||    
T  43387210 tatatatataat--attatcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagctcatttgtttaacggatttaattttca 43387305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 13455701 - 13455841
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaat 333  Q
    ||||||||| ||| |||| ||||||||||||||||| | |||||||    ||| || ||||||| || |||||||||| | ||||  |||||| ||||||    
T  13455701 tcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaac-gaattaattatcgaatcgaat 13455799  T
Q  334 gtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     || || |||  || ||||||||||||| |||| ||||||||    
T  13455800 ctcaaattattttcaagttggttcggtttattgtcagcccta 13455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 41822113 - 41822153
Alignment:
Q  236 aagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  41822113 aagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 43387368 - 43387400
Alignment:
Q  346 tcgagttggttcggttcattgccagccctactt 378  Q
    |||||||||||||||||||||||||||||||||    
T  43387368 tcgagttggttcggttcattgccagccctactt 43387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 49378125 - 49378093
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccaca 134  Q
    |||||||||||||||||||||||||||||||||    
T  49378125 aagacaaaattgtattcagccacatttgccaca 49378093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 9959342 - 9959385
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||    
T  9959342 ctcaagttcagcttatttatttaacgaacttaattttcagctca 9959385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 28470786 - 28470853
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattt 268  Q
    |||||||||  |||||||||| ||||   |||||||||||||||||||||| |||| ||| |||||||    
T  28470786 ctcatgaactaaacgagttgagctattcatagctcaagttcagctcatttatttaatgaaattaattt 28470853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 376
Target Start/End: Original strand, 38791731 - 38791832
Alignment:
Q  273 ctcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 372  Q
    ||||||| |||||| || |||||||||||||||||||||| | |||  | |||| | || |  | ||||||  |||||||||||||||||||||||||||    
T  38791731 ctcaagttcagctcatttggttcatgaaccaagttcaacgag-ttaattgtcgaattgattc-caaactattgtcgagttggttcggttcattgccagcc 38791828  T
Q  373 ctac 376  Q
    ||||    
T  38791829 ctac 38791832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 4274596 - 4274555
Alignment:
Q  335 tcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||  |||||||||||||||||||||| ||||||||    
T  4274596 tcgaactattttcgagttggttcggttcattgctagccctac 4274555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 5762703 - 5762611
Alignment:
Q  215 gagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttc 308  Q
    ||||| |||||||| ||| | ||| ||||| |||||| |||||||| |||||||||| |||||   || ||| || ||||||||||||||||||    
T  5762703 gagttaaactatatatagttgaagctcagc-catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttc 5762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 9959431 - 9959472
Alignment:
Q  335 tcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||  ||||||||||||||||||||| |||||||||    
T  9959431 tcgaactattgtcgagttggttcggttcattgtcagccctac 9959472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 13761824 - 13761877
Alignment:
Q  259 aacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||||||||| ||||| | |||||| || |||||||||||||||| |||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacg 13761877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 24550049 - 24550122
Alignment:
Q  206 gaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    ||||| ||||||| || |||||  || |||||||||| |||||||| ||||| ||||||||||| | |||||||    
T  24550049 gaaccaaacgagtcgagctatacataactcaagttcaactcatttagttaacaaacttaatttttagctcaagt 24550122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 38791676 - 38791748
Alignment:
Q  178 tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcattt 250  Q
    ||||| |||||| ||| || || |||||||||| | |||||  ||||||||  ||||||||||||||||||||    
T  38791676 tatattatcgattatcgagtcagctcatgaaccaaccgagtcaaactatatacagctcaagttcagctcattt 38791748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 41959011 - 41959283
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41959011 aagacaaaattgtattcagccacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 41959110  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    |||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  41959111 tcattaacctaacgagtcgaactatatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaat 41959210  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  41959211 caagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 36538524 - 36538796
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| || ||||    
T  36538524 aagacaaaattgtattcagccacatttgtcacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagtcatc 36538623  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36538624 tcatgaacctaacgagtcgaactatatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaac 36538723  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  36538724 caagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 153 - 363
Target Start/End: Original strand, 34064624 - 34064833
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34064624 aaaaactaactcaaattgatttatatatataatcgataatcgaaccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaa 34064723  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  34064724 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaac-ggattagatattgagtcgaatgtcgaactataattgagtt 34064822  T
Q  353 ggttcggttca 363  Q
    |||||||||||    
T  34064823 ggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 165 - 373
Target Start/End: Original strand, 26436285 - 26436491
Alignment:
Q  165 aaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaactta 264  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26436285 aaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaactta 26436384  T
Q  265 attttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 364  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  26436385 attttcagctcacgttcagctcgttaggttcatgaaccaagttcaac-ggattaaatatcgagtcgaatgtc-aattataatcgagttggttcggttcat 26436482  T
Q  365 tgccagccc 373  Q
    |||| ||||    
T  26436483 tgccggccc 26436491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 154 - 375
Target Start/End: Original strand, 27634585 - 27634811
Alignment:
Q  154 aaaactaactcaaattgatttata------tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctca 247  Q
    ||||||||||||||||||||||||      ||||||||| |||||  || |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  27634585 aaaactaactcaaattgatttatatatatatatataatcaataatggagtcatctcatgaacctaacgagtcaaactatatgtagctcaagttcagctca 27634684  T
Q  248 tttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatc 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  27634685 tttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatc 27634783  T
Q  348 gagttggttcggttcattgccagcccta 375  Q
    ||||||||||||||||||||||||||||    
T  27634784 gagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 195 - 375
Target Start/End: Original strand, 33831456 - 33831635
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33831456 agccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggtt 33831555  T
Q  295 catgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33831556 catgaaccaaattcaac-ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 244 - 375
Target Start/End: Complemental strand, 33164110 - 33163980
Alignment:
Q  244 ctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactat 343  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactat 33164012  T
Q  344 aatcgagttggttcggttcattgccagcccta 375  Q
    |||||| ||||||||||||||| || ||||||    
T  33164011 aatcgaattggttcggttcattaccggcccta 33163980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 153 - 260
Target Start/End: Original strand, 33831346 - 33831453
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33831346 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaa 33831445  T
Q  253 ttaacgaa 260  Q
    ||||||||    
T  33831446 ttaacgaa 33831453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 3409361 - 3409188
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||| | | ||||| |||||||||  ||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||| || || ||||||||||    
T  3409361 ctcatgaatcaatcgagtcgaactatatacagctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaa 3409262  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||||| | |||  | |||| |||| | |||||||||  ||||||||||||||||||||||||||||||    
T  3409261 ccaagttcaacgag-ttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 372
Target Start/End: Complemental strand, 44740655 - 44740486
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| |||||||||  ||||||||||||||||||||  ||||||||||||||||| | ||||||| ||||||||| ||||||||||    
T  44740655 ctcatgaacc-accgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaa 44740557  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 372  Q
    |||||||||||| | |||  | |||| |||| |  | ||||||  |||||||||||||||||||||||||||    
T  44740556 ccaagttcaacgag-ttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 375
Target Start/End: Original strand, 11027873 - 11028048
Alignment:
Q  199 atctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatg 298  Q
    ||||| |||||| ||||||| |||||| || |||||||||||||||||| ||| || |||||||||||||| |  |||||| | |||| || ||||||||    
T  11027873 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatg 11027972  T
Q  299 aaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| || | || |  |||||| | ||||  |||||| |||| ||||||||||||||||||||||||||||    
T  11027973 aaccaagttcgac-gaatcaattatcgaattgaattacgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 2647143 - 2647036
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| ||||||||| || |||||||||| || ||||| ||||||||||||||||| | ||||||| | ||||||| ||||||||||||||    
T  2647143 tgaaccaaacgagtcgaactatatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaa 2647044  T
Q  305 gttcaacg 312  Q
    ||||||||    
T  2647043 gttcaacg 2647036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 40458889 - 40458998
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||||||| ||||||| ||||||||||||||||||| |  ||| || ||||| |||||    
T  40458889 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 40458988  T
Q  302 caagttcaac 311  Q
    ||||||||||    
T  40458989 caagttcaac 40458998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 236 - 371
Target Start/End: Complemental strand, 24844804 - 24844670
Alignment:
Q  236 aagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgt 335  Q
    |||||||||||||||| ||| |||| |||||||||| ||||||| |||||| || |||||||||||||||||||||| || ||  |  ||| |||| | |    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgaga-taattgccgaatcgagttt 24844706  T
Q  336 cgaactataatcgagttggttcggttcattgccagc 371  Q
    |||||||| ||||||||||||||| |||||| ||||    
T  24844705 cgaactattatcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 207 - 374
Target Start/End: Original strand, 30713129 - 30713295
Alignment:
Q  207 aacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagt 306  Q
    |||| ||||||| |||||  || ||||||||||||| |||| ||| || |||||||||| ||||| |||| || | |||| || ||||||||||||||||    
T  30713129 aaccaaacgagtcgaactgcatatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagt 30713228  T
Q  307 tcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 374  Q
    || || | || |  |||||| ||||||  |||||  ||||||||||||||||||||||||||||||||    
T  30713229 tcgac-gaatcaattatcgaatcgaattacgaacactaatcgagttggttcggttcattgccagccct 30713295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 375
Target Start/End: Complemental strand, 34116359 - 34116173
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||| |||||||| ||||||| |||||| || |||||||||||||||||| ||| ||| ||||||||||||| | ||||||| | ||||     
T  34116359 ataatcgagtcatcacatgaaccaaacgagtcgaactacatatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctca 34116260  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || ||||||||||| |||||| ||   || |  |||  | ||||||  |||||| ||||||||||||||||| ||||||||| |||||    
T  34116259 tttggttcatgaactaagttcgac-aaatcaattattaaatcgaattacgaactctaatcgagttggttcggctcattgccaccccta 34116173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 9963758 - 9963837
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    |||||||||||||||||||  |||||||||||||||| |||| |||| |||||| || |||||||||||| |||||||||    
T  9963758 ctcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacg 9963837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 39690124 - 39690215
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    |||||| || ||||||||||||| ||||||| |||||| || ||||||||||||| |||| ||| || |||||||||||||||| |||||||    
T  39690124 ataatcgagtcatctcatgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcagctcaagt 39690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 34064506 - 34064560
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  34064506 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 34064560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 204 - 372
Target Start/End: Complemental strand, 11007142 - 11006977
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||||| ||||||| ||| ||||  ||  ||||||||| |||||||| ||||||| ||||||||||||||||||| |  ||| || ||||| |||||||    
T  11007142 atgaaccaaacgagtcgaattatacttatttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 11007043  T
Q  304 agttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 372  Q
    |||||||| | || |  |||||  ||||  ||| ||||||  ||||||||||||||||||||| |||||    
T  11007042 agttcaac-gaatcaattatcggatcga--gtcaaactattttcgagttggttcggttcattgtcagcc 11006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 26436167 - 26436220
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttactttta 102  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  26436167 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttactttta 26436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 13829878 - 13829956
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||| || ||| || |||| |||||||||||||||||    
T  13829878 tcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacg 13829956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 377
Target Start/End: Complemental strand, 27902613 - 27902437
Alignment:
Q  199 atctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatg 298  Q
    ||||| |||||| ||||||| |||||| || ||||||||||||| |||| ||| || ||| | |||||||||| ||||||| | | || ||  |||||||    
T  27902613 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacg-atttaattttcagctcaagttcggttcattttgttcatg 27902515  T
Q  299 aaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    |||||||||| || | || |  | |||| |||| |  |||||| ||||||||||||||||||||| || ||||||||||    
T  27902514 aaccaagttcgac-gaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttcaatgtcagccctact 27902437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 36538448 - 36538502
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  36538448 tccaacaaaattcaattaattgtgaacaaaattcataatattcttttacttttaa 36538502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 38409747 - 38409641
Alignment:
Q  198 catctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    |||||| |||||| ||||||  ||||||||| ||| | |||||||||||| ||| || || ||||||||||||| ||||||| | |||| || |||||||    
T  38409747 catctcgtgaaccaaacgagccgaactatatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcat 38409648  T
Q  298 gaaccaa 304  Q
    |||||||    
T  38409647 gaaccaa 38409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 41958935 - 41958989
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  41958935 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttaattttaa 41958989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 18667721 - 18667827
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||||| ||||||| ||||||||| || |||||||||| || ||||| |||||||| ||||  || | ||||| |   ||||||| |||||||||||||    
T  18667721 atgaaccaaacgagtcgaactatatataactcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaacca 18667820  T
Q  304 agttcaa 310  Q
    |||||||    
T  18667821 agttcaa 18667827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 27633532 - 27633582
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttactt 99  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  27633532 tccaacaaaattcaattagctgtgaacaaaattcataatattattttactt 27633582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 40680191 - 40680263
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    ||||||| | ||||| ||||||||| || ||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  40680191 atgaaccaatcgagtcgaactatatataactcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 1094456 - 1094533
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaa 310  Q
    |||||||||  |||||||| | ||||| ||||||||||||||||||| |  ||| || |||||||||||||| |||||    
T  1094456 ctcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 20987768 - 20987845
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaa 265  Q
    |||||| || ||||||||||| ||||||| | |||| || | ||| |||| ||||||||||||||| |||||||||||    
T  20987768 ataatcgagtcatctcatgaatctaacgaatcgaaccatttatagttcaacttcagctcatttaatcaacgaacttaa 20987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 27464688 - 27464572
Alignment:
Q  258 gaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttc 357  Q
    ||||||||||||||| |||||| |  ||| || |||||||||||||| ||||||   || |  |||||| || | | |||||||||  ||||||||||||    
T  27464688 gaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaa-atcaattatcgaatcaagtctcgaactattttcgagttggttc 27464590  T
Q  358 ggttcattgccagcccta 375  Q
    ||||||||| ||||||||    
T  27464589 ggttcattgtcagcccta 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 14103224 - 14103304
Alignment:
Q  191 atcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttca 271  Q
    ||||||| | |||||||| | || || | ||| ||||| ||| | |||||| |||||||||||||||||||||||||||||    
T  14103224 atcaagctagctcatgaatcaaatgaatcgaaatatatatagtttaagttctgctcatttaattaacgaacttaattttca 14103304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 27633608 - 27633640
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccaca 134  Q
    |||||||||||||||||||||||||||||||||    
T  27633608 aagacaaaattgtattcagccacatttgccaca 27633640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 29806885 - 29806941
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacg 258  Q
    ||||||||||||||||| |||| ||| | |||||||||||| |||||||| ||||||    
T  29806885 tcatgaacctaacgagtcgaaccatacgaagctcaagttcaactcatttatttaacg 29806941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 20203797 - 20203711
Alignment:
Q  291 ggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
    ||||||||||||||||||||||  || |  | | || ||||||  |||||| ||||||||||||||||||| ||||| ||||||||||    
T  20203797 ggttcatgaaccaagttcaacga-atcaattgttgaatcgaattacgaactttaatcgagttggttcggttaattgctagccctactt 20203711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 44935721 - 44935804
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttca 271  Q
    ||||||||| || || ||||||| |||||||  |||||||| ||  | |||||||||||||||| ||||||||| | |||||||    
T  44935721 ataatcaagtcaacttatgaaccaaacgagtcaaactatatataatttaagttcagctcatttagttaacgaacatgattttca 44935804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 40680295 - 40680349
Alignment:
Q  321 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||| ||||||  |||||||| || ||||||||||||||||||||||| ||||    
T  40680295 tatcgaatcgaattccgaactattattgagttggttcggttcattgccagtccta 40680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 153 - 375
Target Start/End: Original strand, 453402 - 453623
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  453402 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaa 453501  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  453502 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagtt 453600  T
Q  353 ggttcggttcattgccagcccta 375  Q
    |||||||||||||||||||||||    
T  453601 ggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 153 - 369
Target Start/End: Original strand, 11161491 - 11161706
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11161491 aaaaactaactcaaattgatttatatatataatccataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaa 11161590  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  11161591 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcaagtt 11161689  T
Q  353 ggttcggttcattgcca 369  Q
    |||| ||||||||||||    
T  11161690 ggtttggttcattgcca 11161706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 375
Target Start/End: Complemental strand, 9412686 - 9412524
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| ||| ||||| || ||||| |||||||||||||  ||||||| |||||| ||||||||||| |||||| || |||||||||||||||||||||    
T  9412686 aacgagtcgaattatatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaac 9412587  T
Q  312 gggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | | ||   | |||||||||    | ||||||||||||||||||||||||||||||||||||||    
T  9412586 gag-ttcattgtcgagtcgagctccaaactataatcgagttggttcggttcattgccagcccta 9412524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 201 - 376
Target Start/End: Original strand, 3307901 - 3308075
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    ||||| |||| | ||||| |||||||||  ||||||||||| ||||||||| ||||||||||||||||||  ||||||| | |||| || ||||||||||    
T  3307901 ctcataaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaa 3308000  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    | |||||| ||| | |||  | |||| |||| |  ||||||||  |||||||||||||||||||||||||||||||    
T  3308001 ctaagttctacgag-ttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagccctac 3308075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 379
Target Start/End: Original strand, 34516092 - 34516282
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||| |||||| || ||| |||||||||||||| |||||  |||||||||||||||| ||||||| | ||||     
T  34516092 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctca 34516191  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactta 379  Q
    || |||| ||||| |||||||||  | || |  | |||| | ||||  |||||| |||| |||||||||||||||||||| ||| |||||||    
T  34516192 tttggttgatgaatcaagttcaa-tgaatcaattgtcgaattgaattacgaactttaattgagttggttcggttcattgcgagctctactta 34516282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 43967481 - 43967588
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| ||||||||| || |||||||||| |||||||| |||||||||||||| || | ||||||| | ||||||| ||||||||||||||    
T  43967481 tgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 43967580  T
Q  305 gttcaacg 312  Q
     |||||||    
T  43967581 attcaacg 43967588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 375
Target Start/End: Complemental strand, 33280146 - 33279977
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| |||||||  ||||| || ||| |||||||||||||| ||| || |||||||||||||| | ||||  | | |||| || ||||||||||||||    
T  33280146 tgaaccaaacgagtctaactacatatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaa 33280047  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||| || | || |  |||||| || |||  |||||| |||||||||||||||||||||||| ||||||||    
T  33280046 gttcgac-gaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 375
Target Start/End: Original strand, 34655006 - 34655175
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| ||||||||| || |||||||| | |||||||| ||||| |||||||| || | ||||||| |  |||||| ||||||||||| ||    
T  34655006 tgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaa 34655105  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||   | ||  || |||||||| |  |||||| || ||||||||  ||||||||||||||||||||    
T  34655106 gttcaac-aaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgccagcccta 34655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 22563974 - 22564084
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||| ||||||||| |||||||| | ||||| | || |||| ||||||||||||||||||| |   |  || |||||||||||    
T  22563974 tcatgaaccaaacgagtcgaattatatgtagttcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaac 22564073  T
Q  302 caagttcaacg 312  Q
    |||||||||||    
T  22564074 caagttcaacg 22564084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 23181133 - 23181225
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    ||||||| |||||| || ||| |||||||||||||| ||| || ||||||||||||||||  |||||| | |||| || ||||||||||||||    
T  23181133 aacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 23181225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 365
Target Start/End: Complemental strand, 27189223 - 27189092
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    |||||||||| |||| ||| || |||||||||||||||| ||||||| |  ||| || |||||||||||||||||| || | || |  |||||| || ||    
T  27189223 ctcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgac-gaatcaattatcgaatctaa 27189125  T
Q  333 tgtcgaactataatcgagttggttcggttcatt 365  Q
    |  |||||| ||||||||||| |||||||||||    
T  27189124 ttacgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 10749381 - 10749314
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    ||||||| |||||| || |||||||||||||||||| ||| || |||||||||||||||| |||||||    
T  10749381 aacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagt 10749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 367
Target Start/End: Original strand, 43384833 - 43384926
Alignment:
Q  273 ctcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgc 367  Q
    ||||||| || ||| || |||||||||||||| |||||||  ||||  |||||| |||||| |||||||||  ||||||||||||||||||||||    
T  43384833 ctcaagttcaactcatttggttcatgaaccaacttcaacga-attaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgc 43384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 1091725 - 1091805
Alignment:
Q  232 gctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||||||| |||||||  || |||||||||||||| |||||| || |  |||||| |||||||||| |||||||||||    
T  1091725 gctcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacg 1091805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 39478136 - 39478192
Alignment:
Q  321 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    |||||| |||| | |||||||||  ||||||||||||||||||||||||||||||||    
T  39478136 tatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccctact 39478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 453293 - 453336
Alignment:
Q  60 tcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  453293 tcaattagttatgaacaaaattcataatattcttttacttttaa 453336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 9135942 - 9136030
Alignment:
Q  224 tatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||| ||| |||||| ||| ||||||| ||||| ||||||| ||||| ||||||| |||||  || | ||||| ||||||||||||||    
T  9135942 tatatatagatcaagtccagttcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacg 9136030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 10346589 - 10346861
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||| |||||| || ||||    
T  10346589 aagacaaaattgtattcagccacatttgccacatttgaattaaaaaattttaaaaaataactcaaattgatttatatatataatcaataatcgagtcatc 10346688  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10346689 tcatgaacttaacgagtcgaactatatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 10346788  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10346789 caagttcaac-ggattagatatagagtcgaatgtcgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 102 - 375
Target Start/End: Original strand, 8200510 - 8200771
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8200510 aagacaaaattgtattcaaccacatttgccacatttgaattaattttttttataaactaactcaaattgatttatatatataatcgataatcgagccatc 8200609  T
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||           ||||||||||||||||||||     
T  8200610 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttt-----------cagctcgttaggttcatgaat 8200698  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  8200699 caagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 202 - 377
Target Start/End: Complemental strand, 3081890 - 3081716
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||||||| |  ||| || ||||| |||||    
T  3081890 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 3081791  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    |||||||||| | |  |  |||||| |||| | |||||||||  ||||| ||||||||||||||||||||||||||    
T  3081790 caagttcaac-gaaccaattatcgaatcgagtatcgaactattttcgagctggttcggttcattgccagccctact 3081716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 205 - 376
Target Start/End: Complemental strand, 5640421 - 5640251
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| ||||||||| ||| |||||||||||||| ||| || ||||||||||||||||  |||||| | |||| || ||||||||||||||    
T  5640421 tgaaccaaacgagtcgaactatatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 5640322  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||| || | || |  |||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  5640321 gttcgac-gaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattgccagccctac 5640251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 178 - 375
Target Start/End: Complemental strand, 4441497 - 4441301
Alignment:
Q  178 tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||| |||||| ||| | ||| |||||||||| | ||| | |||||||||  || |||||||||||||||||| |||||||||||||||||||||||||    
T  4441497 tatattatcgattatcgaaccagctcatgaaccaaccgaatcgaactatatacagttcaagttcagctcatttatttaacgaacttaattttcaactcaa 4441398  T
Q  278 gtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || |||||| ||  |||| |||||||||||||||| |  ||  | |||| |||| | |||||||||  ||||||||||||||||||||||| ||||||    
T  4441397 gttcagctcatttagttcgtgaaccaagttcaacgag-ctaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattgccggcccta 4441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 9950946 - 9950826
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| |||||||||||||| || |||||||||||||||||| ||| || |||||||||||||||||||||||| | ||||     
T  9950946 ataatcgagtcatctcgtgaaccaaacgagttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctca 9950847  T
Q  288 ttaggttcatgaaccaagttc 308  Q
    || ||||||||||||||||||    
T  9950846 tttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 375
Target Start/End: Complemental strand, 10961982 - 10961796
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||| |||||| || ||| |||||||||||||| ||| || |||||||||||||||| ||||| | |  |||     
T  10961982 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactca 10961883  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || ||||||||||||||||||||| | || |  | |||| || |||  | |||| |||||||||||||||||||||||||||||||||    
T  10961882 tttggttcatgaaccaagttcaac-gaatcaattgtcgaatcaaattacaaactttaatcgagttggttcggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 13311990 - 13312164
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| |||||||||||| |||   || ||||||||| |||||||| ||||||||||||||||||||||||||| |  ||| || |||||||||||    
T  13311990 tcatgaaccaaacgagttgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaac 13312089  T
Q  302 caagttcaacgggattagatatcgagtcga--atgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||| |||  | |  |  |||||| ||||  || |||||||||  ||||||||||||||||||||||||||||||    
T  13312090 caagtccaa-tgaaccaattatcgaatcgagtatatcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 7437272 - 7437444
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||||||| ||||||| |||||||||||||| |||| |  ||| || ||||| |||||    
T  7437272 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaac 7437371  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | |     |||||| |||| | |||||||||  ||||||| |||||||||||| |||||||||    
T  7437372 caagttcaac-gaacccattatcgaatcgagtatcgaactattttcgagttagttcggttcattaccagcccta 7437444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 32163539 - 32163618
Alignment:
Q  232 gctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||    
T  32163539 gctcaagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaac 32163618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 205 - 372
Target Start/End: Original strand, 33110429 - 33110595
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| ||||||| ||||||||| || |||||||||  |||||||| |||||||||||||| || | || |||| | ||||||| ||||||||||||||    
T  33110429 tgaaccaaacgagtcgaactatatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaa 33110528  T
Q  305 gttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 372  Q
    ||||||| | | ||  || |||||||| |  |||||| || ||||||||  |||||||||||||||||    
T  33110529 gttcaac-gaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgccagcc 33110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 375
Target Start/End: Original strand, 1501815 - 1501988
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| |||||||||  |||| |||||  ||||||||| ||||||||||||||||||| ||||||| | | || || ||||||||||    
T  1501815 ctcatgaaccaaccgagtcgaactatatacagcttaagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaa 1501914  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |||||||||| | |||  | || | |||| | |||||| ||  ||||||||||||||||||||| ||||||||    
T  1501915 cgaagttcaacgag-ttaattgtcaaatcgagtttcgaacaattgtcgagttggttcggttcattgtcagcccta 1501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 312
Target Start/End: Original strand, 6999209 - 6999345
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaac 273  Q
    ||||||||||||  || ||| ||||| |||||||||| | ||||| |||||||||  || |||||||||| ||||||  ||||| ||||||||||||| |    
T  6999209 tatatatataat--attatcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagttcatttgtttaacaaacttaattttcagc 6999306  T
Q  274 tcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    |||||| |||||| ||  |||||| ||||||||||||||    
T  6999307 tcaagttcagctcatttagttcattaaccaagttcaacg 6999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 307
Target Start/End: Original strand, 22295884 - 22295989
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| || |||||||||||||| || ||||| |||| | |||||| |||||||||||||| || | ||||||| | ||||||| |||||||||||    
T  22295884 tcatgaaccaaaagagttgaactatatataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaac 22295983  T
Q  302 caagtt 307  Q
    ||||||    
T  22295984 caagtt 22295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 10346513 - 10346567
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  10346513 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 10346567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 18099784 - 18099894
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||| |||||||||   ||||||||||||| |||||||| ||||||||||||||| | ||||||| | |  ||| || ||||| |||||    
T  18099784 tcatgaaccaaacgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaac 18099883  T
Q  302 caagttcaacg 312  Q
    |||||||||||    
T  18099884 caagttcaacg 18099894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 375
Target Start/End: Original strand, 17441123 - 17441298
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagc-tcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatg 298  Q
    |||| |||||| || |||| |||||||   || ||||||||| || ||||||| || |||| ||||||||||||||||||| || ||| || ||||||||    
T  17441123 tctcgtgaaccaaatgagtcgaactatccataactcaagttcggcctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatg 17441222  T
Q  299 aaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||| ||||||||| | ||||  || | | |||| | |||||||||  ||| |||||||||||||||||||| |||||    
T  17441223 aactaagttcaac-gaattaattaccaaatcgagtttcgaactattttcgggttggttcggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 8200434 - 8200488
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  8200434 tccaacaaagttcaattagctgtgaacaaaattcataatattcttttacttttaa 8200488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 18095515 - 18095597
Alignment:
Q  230 tagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||||| |  ||  || ||||| ||||||||||||||||    
T  18095515 tagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacg 18095597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 27985076 - 27984956
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||  ||||||| |||||| || ||| |||||||||||||| ||| || || |||||||||||||  |||||| | ||||     
T  27985076 ataatcgagtcatctcgtgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctca 27984977  T
Q  288 ttaggttcatgaaccaagttc 308  Q
    || ||||||| ||||||||||    
T  27984976 tttggttcataaaccaagttc 27984956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 12428854 - 12428929
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    |||||||||| | ||||||||  || || |||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  12428854 ctcatgaaccaatcgagttgagttacatatagctcaagttcggctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 11460179 - 11460014
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    ||||| |||| | ||||| |||||||||  | ||||||||||||||||||| ||||| ||||||||| ||| |||||        | || ||||||||||    
T  11460179 ctcataaaccaaccgagtcgaactatattcaactcaagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaa 11460088  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| | || |  |||||| |||| |  |||||||| || ||||||| |||||||||||||| |||||    
T  11460087 ccaagttcaac-gaatcaattatcgaatcgagttccgaactattattgagttggatcggttcattgccaacccta 11460014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 13355761 - 13355722
Alignment:
Q  238 gttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  13355761 gttcagctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 2962874 - 2962799
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||||| | ||||||||||| ||||  ||| | |||||  ||||||||| ||||| |||||||||||||||||||    
T  2962874 tcatgaatcaaacgagttgaattatacatagtttaagtttggctcatttatttaactaacttaattttcaactcaa 2962799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 3901548 - 3901607
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaa 260  Q
    |||||||||| |||||   ||||||||| || || |||||||||||||||||||||||||    
T  3901548 ctcatgaaccaaacgaaccgaactatatataacttaagttcagctcatttaattaacgaa 3901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 21298912 - 21298955
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactca 276  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  21298912 ctcaagttcagctcagttaattaacaaacttaattttcagctca 21298955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 102 - 369
Target Start/End: Original strand, 41609755 - 41610021
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnn-aaaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||| || |||    
T  41609755 aagacaaaattgtattcagccacatttgcctcatttgaattaattttttttaaaaaactaactcaaattgatttatatatataatcgataatcgagtcat 41609854  T
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41609855 ctcatgaacccaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaa 41609954  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41609955 ccaagttcaac-ggattaaatatcgagtcgaatgtcgaactataatcgagttgg-tcggttcattgcca 41610021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 153 - 375
Target Start/End: Original strand, 32689088 - 32689309
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaa 252  Q
    |||||||||||||||||||||||||||||||||| |||||  || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  32689088 aaaaactaactcaaattgatttatatatataatcaataattgagtcatctcatgaacttaacgagtcgaactatatgtagctcaagttcagctcatttaa 32689187  T
Q  253 ttaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagtt 352  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32689188 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac-ggattagatatcgagtcgaatgtcgaactataatcgagtt 32689286  T
Q  353 ggttcggttcattgccagcccta 375  Q
    |||||||||||||| ||||||||    
T  32689287 ggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 102 - 373
Target Start/End: Complemental strand, 23206580 - 23206310
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||| ||| ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||  || |||    
T  23206580 aagacaaaattgtattaagcgacatttgccacatttgaattaatttttttttaaaaactaactcaaattgatttatatatataatcgataattgagtcat 23206481  T
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23206480 ctcatgaacctaataagtcgaactatatgtagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaa 23206382  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 373  Q
    | |||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23206381 caaagttcaac-agattaaatatcaagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 23206310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 178 - 378
Target Start/End: Complemental strand, 9505317 - 9505118
Alignment:
Q  178 tatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaa 277  Q
    ||||| |||||| ||| ||||| |||||||||| | |||   ||||||||| || ||||||||||||||||||| ||||||||||||||||||| |||||    
T  9505317 tatattatcgattatcgagccagctcatgaaccaaccgaaccgaactatatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaa 9505218  T
Q  278 gtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    || || ||| || |||||||||||||||||||||| | |||  | |||| |||| |  ||||||||  ||||||||||||||||||||||||||||||||    
T  9505217 gttcaactcatttggttcatgaaccaagttcaacgag-ttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagccctact 9505119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 188 - 378
Target Start/End: Original strand, 44574480 - 44574669
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| ||| | |||||||||| ||||||  |||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||| ||||||     
T  44574480 ataatcgagctaactcatgaaccaaacgagccgaactatatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctca 44574579  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 378  Q
    ||||||||| |||| ||||||||| | ||||  |  ||||||||   |||||||||| ||||||||  |||||||||||||||||||||||    
T  44574580 ttaggttcacgaactaagttcaac-gaattaattgccgagtcgagcttcgaactatattcgagttgtctcggttcattgccagccctactt 44574669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 188 - 375
Target Start/End: Original strand, 39135308 - 39135494
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||||||||| | |||| || | ||| | |||||||||||||||||||||||||||||||||||| ||||||| | ||||     
T  39135308 ataatcgagtcatctcatgaacctaacgaatcgaaccatctatagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctca 39135407  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || ||||||||||||||||||||  | |  |  | |||||||||||   |||||||| |||||||||||||||| |||||||||||||    
T  39135408 tttggttcatgaaccaagttcaa-tgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 377
Target Start/End: Complemental strand, 19560927 - 19560772
Alignment:
Q  221 aactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattaga 320  Q
    |||||||| || ||||||||| ||||||||| |||||| |||||| | | ||||||||| ||||| |||  |||||||||||||||||||| | ||||      
T  19560927 aactatatataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaac-gaattaat 19560829  T
Q  321 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    | |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  19560828 tgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagccctact 19560772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 380
Target Start/End: Complemental strand, 39469717 - 39469526
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||||||||| | |||| || | ||  ||||||| |||||||||||||||||||||||||||||| ||||||| | ||||     
T  39469717 ataatctagtcatctcatgaacctaacgaatcgaacaatctataattcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctca 39469618  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttat 380  Q
    || | ||||||||||||||||||  |||  |  |||||| ||||||  ||||||||| |||||||||||| |||||||  |||||||||||||    
T  39469617 tttgattcatgaaccaagttcaa-tggaccaattatcgaatcgaattacgaactatattcgagttggttcagttcattatcagccctacttat 39469526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 375
Target Start/End: Complemental strand, 54393629 - 54393443
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||||||| |||||| || ||| |||||||| ||||| ||| || |||||||||||||||| ||||||| | ||||     
T  54393629 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctca 54393530  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || |||| |||||||||||||||| | || |  | |||| ||||||  |||||| |||||||||||||||||||||||||||||||||    
T  54393529 tttggtttatgaaccaagttcaac-gaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 12710670 - 12710842
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   | |||||||||  |||||||| ||||||| ||||||||||||||||||| |  ||| || |||||||||||    
T  12710670 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaac 12710769  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| | | |  |||||| |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  12710770 caagttcaacgag-tcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 376
Target Start/End: Original strand, 25253663 - 25253843
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    ||||| |||||||||| | ||||| ||  || || ||||| |||||| ||||||||| ||||||||||||||||| | ||||||| |||||| || ||||    
T  25253663 agccaactcatgaaccaatcgagtcgagttacatatagcttaagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggtt 25253762  T
Q  295 catgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||||||||||  | |||  | ||||||||| |  | ||||||| |||||||||||||||||||||||||||||||    
T  25253763 catgaaccaagttcaacaagttta-ttgtcgagtcgagttccaaactatattcgagttggttcggttcattgccagccctac 25253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 369
Target Start/End: Complemental strand, 39942986 - 39942806
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| ||| | ||||| |||| ||||||| || | || | || |||||||||||||||| || ||||||||||||||||||| ||||||| ||||||     
T  39942986 ataatcgagctaactcataaaccaaacgagtcgagccatctataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctca 39942887  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    ||| ||||||||||||||||||||  |||||  |  ||| |||||| |||||||||| |||||||||||| |||||||||||    
T  39942886 ttaagttcatgaaccaagttcaac-agattaattgccgaatcgaatttcgaactatactcgagttggttcagttcattgcca 39942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 201 - 375
Target Start/End: Original strand, 52934779 - 52934952
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| | ||||| ||||||||| ||| |||||||| ||||||||| ||||||||||||||||||  ||||||| |||||| || ||||||||||    
T  52934779 ctcatgaaccaatcgagtcgaactatatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaa 52934878  T
Q  301 ccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||| | | |||  |||||| |||| |  ||||||||  || ||||||||| |||||||||||| ||||    
T  52934879 ccaagttcaatgag-ttaattatcgaatcgagttccgaactattgtcaagttggttcagttcattgccagaccta 52934952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 52199426 - 52199569
Alignment:
Q  231 agctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcg 330  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| | ||||  | |||| |||    
T  52199426 agctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaac-gaattaattgtcgaatcg 52199524  T
Q  331 aatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    | |  | ||||||  ||||||||||||| ||||||| ||||||||    
T  52199525 agtcccaaactattgtcgagttggttcgattcattgtcagcccta 52199569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 375
Target Start/End: Complemental strand, 46293389 - 46293213
Alignment:
Q  198 catctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcat 297  Q
    ||||||||||||| ||||| | ||||||| | ||| | ||||||| |||||||||||||||||||||||||||| ||||||| | |||| || |||||||    
T  46293389 catctcatgaaccaaacgaatcgaactatttatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcat 46293290  T
Q  298 gaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||| |||||   ||  |  | || |||||||| | |||||||| |||||||| |||||||||||| ||||||||    
T  46293289 gaaccaaattcaa-ttgaccaattgtcaagtcgaattttgaactatattcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 28242544 - 28242661
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggtt 294  Q
    ||||| |||||||||| | ||||| |||||||||  ||||||||||||| ||||||| |||||||| |||||||||| ||||| | |||||| || ||||    
T  28242544 agccagctcatgaaccaaccgagtcgaactatatacagctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggtt 28242643  T
Q  295 catgaaccaagttcaacg 312  Q
    |||||||||| |||||||    
T  28242644 catgaaccaaattcaacg 28242661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 30662303 - 30662131
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| ||||||||   | |||||||||  |||||||| ||||||| ||||||||||||||||||| |  ||| || | |||||||||    
T  30662303 tcatgaaccaaacgagtcgaactatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaac 30662204  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||| | | |  |||||| |||||| || ||||||  |||||||||||||| |||||| ||||||||    
T  30662203 caagttcaacgag-tcaattatcgaatcgaatctcaaactattttcgagttggttcggctcattgtcagcccta 30662131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 376
Target Start/End: Complemental strand, 33438917 - 33438730
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || |||||| |||||| ||| ||| |||||| || ||| |||| || |||||| ||| || |||||||||||||||| ||||||| |  |||     
T  33438917 ataatcgagtcatctcgtgaaccaaacaagtcgaactacatatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactca 33438818  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    || ||||||||||||||||||||| | || |  | |||| ||||||  | |||| |||||||||||||||||||||||| |||||||||    
T  33438817 tttggttcatgaaccaagttcaac-gaatcaattgtcgaatcgaattacaaactttaatcgagttggttcggttcattgtcagccctac 33438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 374
Target Start/End: Complemental strand, 26049681 - 26049541
Alignment:
Q  233 ctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaa 332  Q
    |||||||||  || ||||| ||||||| ||||||||||||||||||| |  ||| || | ||||||||||||||||||| || | |  |||||| |||||    
T  26049681 ctcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacagg-tcaattatcgaatcgaa 26049583  T
Q  333 tgtcgaactataatcgagttggttcggttcattgccagccct 374  Q
    | || ||||||  |||||||||||||||||||||||||||||    
T  26049582 tctcaaactattttcgagttggttcggttcattgccagccct 26049541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 50965370 - 50965474
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaa-ttttcaactcaagtccagctcgttaggttcatga 299  Q
    ||||||| || | ||||| |||| |||| |||||||||||||||||||||| ||||||||||||| |||||| ||||| | |||||| ||||||||||||    
T  50965370 ctcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatga 50965469  T
Q  300 accaa 304  Q
    |||||    
T  50965470 accaa 50965474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 51068505 - 51068609
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaa-ttttcaactcaagtccagctcgttaggttcatga 299  Q
    ||||||| || | ||||| |||| |||| |||||||||||||||||||||| ||||||||||||| |||||| ||||| | |||||| ||||||||||||    
T  51068505 ctcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatga 51068604  T
Q  300 accaa 304  Q
    |||||    
T  51068605 accaa 51068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 40943529 - 40943701
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||||| ||||||| |||| |||   || ||||||||| |||||||| ||||||| ||||||||||||||||||| |  ||| || |||||||||||    
T  40943529 tcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaac 40943628  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||| |||  | |  |  |||| | |||| | |||||||||  |||||||||||||||| |||||||||||||    
T  40943629 caagtccaa-tgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 52199331 - 52199441
Alignment:
Q  174 tatatatataatcgataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaac 273  Q
    ||||||||||||  || ||| ||||| |||||||||| |  |||| |||||||||  ||||||||||||||||||||  ||||||||||||||||||| |    
T  52199331 tatatatataat--attatcgagccaactcatgaaccaactgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagc 52199428  T
Q  274 tcaagtccagctc 286  Q
    |||||| ||||||    
T  52199429 tcaagttcagctc 52199441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 375
Target Start/End: Original strand, 30743593 - 30743712
Alignment:
Q  255 aacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttgg 354  Q
    ||||||||||||| ||||||||| | |||||| || |||||||||||||||||||||| | | |  | |||||||||    ||||||||| |||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatct-tcgagtcgagctccgaactatattcgagttgg 30743691  T
Q  355 ttcggttcattgccagcccta 375  Q
    ||||||||||| |||||||||    
T  30743692 ttcggttcatttccagcccta 30743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 5418649 - 5418755
Alignment:
Q  205 tgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaa 304  Q
    |||||| || |||| ||||||||| || |||||||||| |||||||| |||||||||||||| || | ||||||| |  |||||| ||||||||||| ||    
T  5418649 tgaaccaaatgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaa 5418748  T
Q  305 gttcaac 311  Q
    |||||||    
T  5418749 gttcaac 5418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 41609679 - 41609733
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  41609679 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 41609733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 366
Target Start/End: Original strand, 18074531 - 18074707
Alignment:
Q  189 taatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgt 288  Q
    |||||||| || ||| |||||  ||| ||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||  |||| | || ||| |    
T  18074531 taatcaagtcaactcttgaactaaacaagttgaattatatatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcat 18074630  T
Q  289 taggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    |  ||||||||| ||| |||||| | ||||  |||| | |||| | ||||||| || ||||||||| || ||||||||    
T  18074631 ttagttcatgaaacaaattcaac-gaattaattatcaaatcgagtctcgaactctattcgagttggctcagttcattg 18074707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 32688972 - 32689024
Alignment:
Q  51 caacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  32688972 caacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 32689024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 23206656 - 23206602
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  23206656 tccaacaaaatttaattagctgtgaacaaaattcataatattcttttacttttaa 23206602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 20550374 - 20550202
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    ||||||| | ||||||| |||| |||  ||| |||||| || |||||||| |||||||| ||||||||||||||| || |  ||| || ||||| |||||    
T  20550374 tcatgaatcaaacgagtcgaaccatacttagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaac 20550275  T
Q  302 caagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    ||||||||||   || |  |||||| |||| | |||||||||  ||||||||||| ||||||||| ||| ||||    
T  20550274 caagttcaac-aaatcaattatcgaatcgagtatcgaactattttcgagttggtttggttcattgacaggccta 20550202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 28687029 - 28687149
Alignment:
Q  191 atcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgtta 290  Q
    |||||| || ||||| |||| | |||||  ||||| || ||||| ||||| ||||| |||| ||||||||||||||||||| ||||| |  ||| |||      
T  28687029 atcaagtcaactcataaaccaaccgagtcaaactacatatagcttaagttgagctcgtttatttaacgaacttaattttcagctcaaatttagcccgtct 28687128  T
Q  291 ggttcatgaaccaagttcaac 311  Q
    |||||||||||||||||||||    
T  28687129 ggttcatgaaccaagttcaac 28687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 53529776 - 53529685
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    |||||| || |||||  |||||| ||||||| |||| | || ||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  53529776 ataatcgagtcatcttgtgaaccaaacgagtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagt 53529685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 15822489 - 15822411
Alignment:
Q  234 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    |||||||| ||||||||| || |||| ||||||||||||||||||| |  |||  | || |||||||||||||||||||    
T  15822489 tcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacg 15822411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 26136300 - 26136410
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaa 300  Q
    |||||||||| |||||||  |||||||||||| | | ||||| |||||||  ||||| ||| ||||||| ||||||||| | ||||  |  |||||| ||    
T  26136300 ctcatgaaccaaacgagtcaaactatatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaa 26136399  T
Q  301 ccaagttcaac 311  Q
    |||||||||||    
T  26136400 ccaagttcaac 26136410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 54432231 - 54432177
Alignment:
Q  321 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||| |||| | |||||||||  ||||||||||||||||||||||||||||||    
T  54432231 tatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcccta 54432177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 311
Target Start/End: Original strand, 1674609 - 1674706
Alignment:
Q  214 cgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||| |||||||||  | ||||||||||||| ||||| |||||  ||  |||||||| || |||| || ||| || |||||||||||||||||||||    
T  1674609 cgagtcgaactatatacaactcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaac 1674706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 33896791 - 33896846
Alignment:
Q  195 agccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcattt 250  Q
    ||||| |||||||||  ||||||| ||||||||| || ||||||||||||||||||    
T  33896791 agccaactcatgaactaaacgagtcgaactatatataactcaagttcagctcattt 33896846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 36917952 - 36917885
Alignment:
Q  245 tcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 312  Q
    |||||||||| |||||||||||||| |||| || | || |||||| |||| |||||||| ||||||||    
T  36917952 tcatttaattcacgaacttaatttttaacttaattacaactcgttgggtttatgaaccacgttcaacg 36917885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 1072882 - 1072813
Alignment:
Q  201 ctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttc 270  Q
    |||||| ||| ||||||  ||||||||| || ||||||||||| |||||  |||||| ||||||||||||    
T  1072882 ctcatggaccaaacgaggcgaactatatataactcaagttcagttcattatattaacaaacttaattttc 1072813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 31589618 - 31589667
Alignment:
Q  230 tagctcaagttcagctcatttaattaacgaacttaattttcaactcaagt 279  Q
    ||||||||||||| | | |||| ||||| |||||||||||||||||||||    
T  31589618 tagctcaagttcaacccgtttatttaacaaacttaattttcaactcaagt 31589667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 37269058 - 37269107
Alignment:
Q  220 gaactatatgtagctcaagttcagctcatttaattaacgaacttaatttt 269  Q
    ||||||||| ||| |||||||||  ||||||| |||||||||||||||||    
T  37269058 gaactatatatagttcaagttcacttcatttagttaacgaacttaatttt 37269107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 53529649 - 53529616
Alignment:
Q  343 taatcgagttggttcggttcattgccagccctac 376  Q
    ||||||||||||||||||||||||||| ||||||    
T  53529649 taatcgagttggttcggttcattgccacccctac 53529616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 45714784 - 45714832
Alignment:
Q  323 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagc 371  Q
    |||| ||||||  |||||| ||||||||||||||| |||||||||||||    
T  45714784 tcgaatcgaataacgaactttaatcgagttggttcagttcattgccagc 45714832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 377
Target Start/End: Complemental strand, 7494 - 7306
Alignment:
Q  188 ataatcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcg 287  Q
    |||||| || ||||||||||||| ||||||| || |||||| | | |||||||||||||| ||| ||| ||||||||||||||| ||||||| | ||||     
T  7494 ataatcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctca 7395  T
Q  288 ttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 377  Q
    || |||||||||||||||||| || | || |  |||||| ||||||  |||||  ||||||| ||||||||||||||||||| |||||||    
T  7394 tttggttcatgaaccaagttcgac-gaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattgccacccctact 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 369
Target Start/End: Complemental strand, 124664 - 124487
Alignment:
Q  191 atcaagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgtta 290  Q
    |||||| ||||||||||||| ||||| | ||| ||| | ||| |||| ||||||||||||||||||| ||||||||  ||| ||||||| |  ||| ||     
T  124664 atcaagtcatctcatgaaccaaacgaatcgaaatatctatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcattt 124565  T
Q  291 ggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 369  Q
    ||||||||||||||||||||  |||  |  | ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  124564 ggttcatgaaccaagttcaa-tggaccaattgtcgagtcaaatttcgaactatattcgagttggttcggttcattgcca 124487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 11439 - 11600
Alignment:
Q  204 atgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaacca 303  Q
    ||||||| ||||||| ||| ||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||    
T  11439 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 11538  T
Q  304 agttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 366  Q
    |||||||| | ||||  ||||||||| ||| |  ||||||  |||||||||||||||||||||    
T  11539 agttcaac-gaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 9994 - 10120
Alignment:
Q  239 ttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtcgaatgtcga 338  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| |||||| | ||||  | ||||||| ||| |  |    
T  9994 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaac-gaattaattgtcgagtcaaattttaa 10092  T
Q  339 actataatcgagttggttcggttcattg 366  Q
    |||||| |||||||| ||||||||||||    
T  10093 actatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 376
Target Start/End: Complemental strand, 26796 - 26620
Alignment:
Q  199 atctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatg 298  Q
    ||||| |||||| ||||||| |||||| || ||||| |||||||||||| ||| || |||||||||||||||| ||||||| |  ||| || | ||||||    
T  26796 atctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatg 26697  T
Q  299 aaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 376  Q
    |||||||||||||   || || | |||| ||||||  |||||| |||| ||||||||||| ||||||| |||||||||    
T  26696 aaccaagttcaac-aaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagccctac 26620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 21084 - 21227
Alignment:
Q  230 tagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattagatatcgagtc 329  Q
    ||||||||||||| |||||||| |||| || ||||||||||||||||||| |  ||| || ||||||||||||||||||||||  || |  |||||| ||    
T  21084 tagctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactcttt-ggttcatgaaccaagttcaacga-atcaattatcgaatc 21181  T
Q  330 gaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    || | |||||||||  ||||||||||||||||||||| ||||||||    
T  21182 gagtctcgaactattttcgagttggttcggttcattgtcagcccta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 939 - 829
Alignment:
Q  202 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 301  Q
    |||||||||  |||||| ||| ||||  ||||||||||||| |||||||| ||||||| ||||||||||||| ||| | || ||| || |||||||||||    
T  939 tcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaac 840  T
Q  302 caagttcaacg 312  Q
    |||||||||||    
T  839 caagttcaacg 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 346 - 246
Alignment:
Q  212 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 311  Q
    ||||||| ||||| | | || |||||||||| |||||||||||||||||||||||| | ||||||||| | |||  ||||||||||||||||||| ||||    
T  346 aacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaac 247  T
Q  312 g 312  Q
    |    
T  246 g 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 11376 - 11530
Alignment:
Q  220 gaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacgggattag 319  Q
    ||||||||| ||||| |||||| ||||||||| ||||||||||||||||| |||| |||| || ||| || ||||||||||| |||||| ||| |  ||     
T  11376 gaactatatatagcttaagttcggctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgag-gtaa 11474  T
Q  320 atatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
     | |||| |||| |  | |||||| |||||||||||||||||||||| ||| ||||    
T  11475 ttgtcgaatcgagttccaaactattatcgagttggttcggttcattgtcagtccta 11530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 375
Target Start/End: Original strand, 14392 - 14566
Alignment:
Q  200 tctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatga 299  Q
    |||| |||||| ||||||| |||||||   || || |||||| ||||||||| || |||| |||||||||| |||||||| ||  || || |||||||||    
T  14392 tctcgtgaaccaaacgagtcgaactatccataactaaagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatga 14491  T
Q  300 accaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 375  Q
    |||||||||||  | || |  || ||| |||| | |||||||||  ||| ||||||||||||||||| ||||||||    
T  14492 accaagttcaa-tgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 25719 - 25668
Alignment:
Q  220 gaactatatgtagctcaagttcagctcatttaattaacgaacttaattttca 271  Q
    ||||||||| ||  ||||||||| ||||||||||||||| ||||||||||||    
T  25719 gaactatatataattcaagttcatctcatttaattaacggacttaattttca 25668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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