View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_57 (Length: 384)
Name: NF1314_low_57
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 30 - 304
Target Start/End: Complemental strand, 2674303 - 2674022
Alignment:
| Q |
30 |
catccttgtgaatttcctatttcccaaatgtaaaaaccacacggaaagagctatttacgtttcttttaaacaaagtctcgtctgttgatatacaacttca |
129 |
Q |
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| T |
2674303 |
catcgttgtgaatttcctatttcccaaatgtaaaaaccacacggaaagagctatttatgtttcttttaaacaaagtctcgtctgttgatatacatcttca |
2674204 |
T |
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| Q |
130 |
tcagctcaatcggccttaaccccatttacctctgaatctacttccttctt------cttcatgggatcatcaacaag-ttttcggtgtaagaaactggat |
222 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
2674203 |
tcagctcaaccggccttaaccccatttacctctgaatctacttccttcttcttcttcttcatgggatcatcaacaagtttttcggtgtaagaaactggat |
2674104 |
T |
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| Q |
223 |
gaacacaccgaggagatagacgatcttgcaatttcatgaatcccatcatcatgaattgatggaattcctccagcttctgtgg |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2674103 |
gaacacaccgaggagatagacgatcttgcaatttcatgaatcccatcatcatgaattgatggaattcctccagcttctgtgg |
2674022 |
T |
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