View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_64 (Length: 373)
Name: NF1314_low_64
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_64 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 30 - 338
Target Start/End: Complemental strand, 3085446 - 3085137
Alignment:
| Q |
30 |
ggaaagaaacaaaagaattcatcacaatagggtgcgaacgattgatgaaatagtggaagagataaaagttcgataatggcatattggagttaaagtagat |
129 |
Q |
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| T |
3085446 |
ggaaagaaacaaaagaattcatcacaatagggtgcgaacgattgatgaaatagtggaagagataaaagttcgataatggcatattggagttaaagtagat |
3085347 |
T |
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| Q |
130 |
tgaaaatagatccctg--tctttttatgagtagacttggaacccaaaagattgtttaagaagatgaaaaggggtggcttttgtccattcttttcccgtgg |
227 |
Q |
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| T |
3085346 |
tgaaaatagatccctgtctctttttatgagtagacttggaacccaaaagattgtttaaggagatgaaaaggggtggtttttgtccattc-tttcccgtgg |
3085248 |
T |
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| Q |
228 |
ggttagtgttgggctgagacatcaagtgtacactcttgcgtggtagtttttggtgtagggctggctatggccatgcttatgtttgatctccctccattgc |
327 |
Q |
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| T |
3085247 |
ggttagtgctgggctgagacatcaagtgtacactcttgcgtggtagtttttggtgtagggctgcctatggctattcttatgtttgatctccctccattgc |
3085148 |
T |
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| Q |
328 |
tgttcagctga |
338 |
Q |
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||||| ||||| |
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| T |
3085147 |
tgttcggctga |
3085137 |
T |
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