View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_74 (Length: 349)
Name: NF1314_low_74
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_74 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 75 - 321
Target Start/End: Original strand, 12507205 - 12507451
Alignment:
| Q |
75 |
attattctctcaaatgctcaatagatccaaaaagacaccacgtgctataaagagcctaaagtgaaatgataataacatagttgcaaaaaataaataaata |
174 |
Q |
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| T |
12507205 |
attattctctcaaatgctcaatagatccaaaaatacaccacgtgctataaagagcctaaagtgaaatgataataacatagttgcaaaaaataaataaata |
12507304 |
T |
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| Q |
175 |
aagatattaattatgctctttaagtaaaaagtattgccaatatattttcattccaaagatgtttaattacaatcacaaatatactttggcatatctatct |
274 |
Q |
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| T |
12507305 |
aaaatattaattatgctctttaagtaaaaagtattgccaatatattttcattccaaagatgtttaattacaatcacaaatatactttggcatatctatct |
12507404 |
T |
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| Q |
275 |
atataatttgcagcaactcaaattaacatagttgcatccaagacttt |
321 |
Q |
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| T |
12507405 |
atataatttgcagcaactcaaattaacatagttgcatccaagacttt |
12507451 |
T |
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