View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_85 (Length: 327)
Name: NF1314_low_85
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_85 |
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Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 5012985 - 5013302
Alignment:
| Q |
1 |
aaatagttattccctttttgttaattaattcatatttggttccaaatgtgaaacttaattttccatttggtttaataatctatgccatgcaaaggtttag |
100 |
Q |
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| T |
5012985 |
aaatagttattccctttttgttaattaattcatatttggttccaaatgtgaaacttaattttccatttagtttaataatctatgccatgcaaaggtttag |
5013084 |
T |
|
| Q |
101 |
caacaatgaatttttcaagtgcaagagctctctatgaagtgataataaattgttctagaagtgaaagcatgctcagaaaaattaacttacttattctcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5013085 |
caacaatgaatttttcaagtgcaagagctctctatgaagtgataataaattgttctagaagtgaaagcatgctcagaaaaattaacttacttattctcta |
5013184 |
T |
|
| Q |
201 |
aattgagaaagctatatatgaagnnnnnnnnaagagaaagctatgaagttagaattaaaattataatttttaatacgggtttgaatgagacaaaattcta |
300 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5013185 |
aattgagaaagctatatatgaag-tttttttaagagaaagctatgaagttagaattaaaattataatttttaatacgggtttgaatgagacaaaattcta |
5013283 |
T |
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| Q |
301 |
taatctagtgccctatgct |
319 |
Q |
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||||||||||||||||||| |
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| T |
5013284 |
taatctagtgccctatgct |
5013302 |
T |
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