View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_low_94 (Length: 314)
Name: NF1314_low_94
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_low_94 |
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Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 303
Target Start/End: Original strand, 25032527 - 25032809
Alignment:
| Q |
30 |
taaattcgagagattatgagttcgagctttgttaacgcatttagaggaagataaatataaatacttttctaaatgctcttttgagaaggtcttcgatc-- |
127 |
Q |
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| T |
25032527 |
taaattcgagagattatgagttcgagcttcgttaacacatttagaggaagataaatataaatacttttctaaatgctcttttgagaaggtcttcaatcag |
25032626 |
T |
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| Q |
128 |
------ttctgtaccacgacatcgtcccttaccctacatttttattaggnnnnnnnnngaa-gaaattgtaccttataattctaagcgtttgatctaatg |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |
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| T |
25032627 |
aagattttctgtaccacgacatcgtcccttaccctacatttttattaggaaaaaaaagaaaagaaattgtaccttataattctaatggtttgatctaata |
25032726 |
T |
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| Q |
221 |
gtaaaaggacaattttgaatatgagagattctgaatttaagcttcgttaggatctttagaaagagatatatgtaaatacctat |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
25032727 |
gtaaaaggacaattttgaatatgagagattctgaatttaagcttcgttagaatctttagaaagagatatatgtaaatacctat |
25032809 |
T |
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