View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13150_high_15 (Length: 277)
Name: NF13150_high_15
Description: NF13150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13150_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 49534010 - 49534264
Alignment:
| Q |
18 |
acaaatgtatcactcgcagtaatggcatgcctaatataggccattcatttttattaattgatgttcacctttggaccatgtcctcttagctatggacctc |
117 |
Q |
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| T |
49534010 |
acaaatgtatcactcgcagtaatgacatgcctaatataggccattcatttttattaattgatgttcacctttggaccatgtcctcttagctatggacctc |
49534109 |
T |
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| Q |
118 |
tgctggaataattctcaagattatctctttagtaattttcctctgaaaaagaaagtgcattagagaattgttaattagaaaagaatatctatgaataata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49534110 |
tgctggaataattctcaagattatctctttagtaattttcctctgaaaaagaaagtgcattagagaattgttaattagaaaagaatatctatgaataata |
49534209 |
T |
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| Q |
218 |
ttatttcaatagatatgtccagccatttaaatcactcacccacagaattatatac |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
49534210 |
ttatttcaatagatatgtccagccatttaaatcactcacccacaggattatatac |
49534264 |
T |
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