View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13154_high_4 (Length: 206)
Name: NF13154_high_4
Description: NF13154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13154_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 24434554 - 24434711
Alignment:
| Q |
16 |
atgaagatcaaggagaagttaattcgattcttttattccttacgtaccagaaccattctaagtggtcctattcttttccaaggaatgttgcaatcttatc |
115 |
Q |
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| T |
24434554 |
atgaagatcaaggagaagttaattcgattcttttattccttacgtaccagaaccattctaagtggtcctattcttttccaaggaatgttgcaatcttatc |
24434653 |
T |
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| Q |
116 |
cctccattttttaatgcttcatcttcaagttttttgattgacaaaaccaaattgaacc |
173 |
Q |
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| T |
24434654 |
cctccattttttaatgcttcatcttcaagttttttgattgacaaaaccaaattgaacc |
24434711 |
T |
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