View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13155_low_2 (Length: 933)

Name: NF13155_low_2
Description: NF13155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13155_low_2
NF13155_low_2
[»] chr4 (58 HSPs)
chr4 (8-829)||(34136720-34137541)
chr4 (1-425)||(34140790-34141211)
chr4 (1-425)||(34133213-34133637)
chr4 (472-829)||(34131029-34131386)
chr4 (8-398)||(34126967-34127357)
chr4 (472-816)||(34125900-34126244)
chr4 (470-829)||(34139878-34140237)
chr4 (509-829)||(34142524-34142847)
chr4 (108-418)||(34143277-34143587)
chr4 (841-915)||(34136602-34136676)
chr4 (841-915)||(19934632-19934706)
chr4 (841-915)||(54164807-54164881)
chr4 (842-909)||(29006830-29006897)
chr4 (841-912)||(54164888-54164959)
chr4 (853-915)||(37255688-37255750)
chr4 (840-915)||(3094338-3094413)
chr4 (852-915)||(15659940-15660003)
chr4 (841-912)||(19934713-19934784)
chr4 (840-915)||(29006907-29006982)
chr4 (849-915)||(20788107-20788173)
chr4 (841-915)||(52914070-52914144)
chr4 (844-913)||(20215564-20215633)
chr4 (852-901)||(22020121-22020170)
chr4 (847-915)||(6462784-6462852)
chr4 (841-916)||(12927103-12927178)
chr4 (841-912)||(55936062-55936133)
chr4 (849-915)||(3740380-3740446)
chr4 (849-915)||(4983291-4983357)
chr4 (841-915)||(24851405-24851479)
chr4 (841-915)||(26920666-26920740)
chr4 (841-915)||(28702133-28702207)
chr4 (840-913)||(28702054-28702127)
chr4 (849-914)||(54106477-54106542)
chr4 (851-915)||(16667135-16667199)
chr4 (842-906)||(20598252-20598316)
chr4 (853-913)||(35005129-35005189)
chr4 (852-908)||(37255760-37255816)
chr4 (849-900)||(20788038-20788089)
chr4 (840-915)||(21586990-21587065)
chr4 (849-900)||(31280335-31280386)
chr4 (846-913)||(45828571-45828638)
chr4 (846-912)||(2401039-2401105)
chr4 (841-907)||(3504071-3504137)
chr4 (853-915)||(4386329-4386391)
chr4 (841-915)||(4406235-4406309)
chr4 (854-908)||(5535721-5535775)
chr4 (849-915)||(5535785-5535851)
chr4 (853-915)||(6087505-6087567)
chr4 (854-908)||(26636519-26636573)
chr4 (851-901)||(28815869-28815919)
chr4 (841-871)||(52281112-52281142)
chr4 (853-914)||(3094273-3094334)
chr4 (855-908)||(11796663-11796716)
chr4 (853-906)||(20215640-20215693)
chr4 (852-913)||(24941116-24941177)
chr4 (838-871)||(33036980-33037013)
chr4 (839-908)||(44171426-44171495)
chr4 (853-906)||(44171513-44171565)
[»] chr1 (45 HSPs)
chr1 (840-912)||(52923316-52923388)
chr1 (849-916)||(5431343-5431410)
chr1 (851-915)||(42660427-42660491)
chr1 (852-915)||(52112881-52112944)
chr1 (849-915)||(19175590-19175656)
chr1 (842-915)||(1602889-1602962)
chr1 (840-911)||(23944030-23944101)
chr1 (849-915)||(10256783-10256849)
chr1 (841-915)||(48083498-48083572)
chr1 (849-914)||(5431413-5431478)
chr1 (841-909)||(14214607-14214675)
chr1 (854-914)||(34597527-34597587)
chr1 (841-901)||(51022711-51022771)
chr1 (849-916)||(1409120-1409187)
chr1 (842-913)||(8258017-8258088)
chr1 (842-913)||(11989383-11989454)
chr1 (841-900)||(14214544-14214603)
chr1 (840-911)||(19175664-19175735)
chr1 (849-908)||(19580272-19580331)
chr1 (842-909)||(34658381-34658448)
chr1 (852-915)||(42915652-42915715)
chr1 (853-915)||(2122641-2122703)
chr1 (849-915)||(34768350-34768416)
chr1 (849-915)||(38834613-38834679)
chr1 (856-906)||(42660366-42660416)
chr1 (840-913)||(33604065-33604138)
chr1 (846-915)||(47446703-47446772)
chr1 (841-901)||(35156329-35156389)
chr1 (841-901)||(46412697-46412757)
chr1 (841-913)||(48022589-48022661)
chr1 (842-913)||(639794-639865)
chr1 (841-908)||(1035881-1035948)
chr1 (840-915)||(11989302-11989377)
chr1 (839-914)||(15351707-15351782)
chr1 (842-909)||(35367556-35367623)
chr1 (842-909)||(52923401-52923468)
chr1 (853-911)||(6340565-6340623)
chr1 (841-915)||(29302137-29302211)
chr1 (840-874)||(33939410-33939444)
chr1 (849-914)||(14958683-14958748)
chr1 (842-871)||(18353688-18353717)
chr1 (861-914)||(34597586-34597639)
chr1 (842-915)||(34953891-34953964)
chr1 (844-913)||(34953970-34954039)
chr1 (841-914)||(47446626-47446699)
[»] chr3 (32 HSPs)
chr3 (840-915)||(2128433-2128508)
chr3 (841-918)||(22496945-22497022)
chr3 (849-908)||(4190631-4190690)
chr3 (854-915)||(4190700-4190761)
chr3 (841-913)||(10872746-10872818)
chr3 (851-915)||(36571379-36571443)
chr3 (841-900)||(12708682-12708741)
chr3 (849-915)||(105443-105509)
chr3 (841-915)||(611576-611650)
chr3 (849-915)||(611653-611719)
chr3 (841-915)||(45736681-45736755)
chr3 (841-914)||(26367465-26367538)
chr3 (848-901)||(36566721-36566774)
chr3 (854-915)||(39836937-39836998)
chr3 (842-915)||(40470490-40470563)
chr3 (841-910)||(50603590-50603659)
chr3 (841-909)||(105366-105434)
chr3 (841-913)||(35572074-35572146)
chr3 (849-901)||(42787701-42787753)
chr3 (849-913)||(52931643-52931707)
chr3 (851-901)||(13900232-13900283)
chr3 (841-912)||(54595784-54595855)
chr3 (853-915)||(24722693-24722755)
chr3 (853-915)||(39682615-39682677)
chr3 (849-915)||(40639781-40639847)
chr3 (841-915)||(42787610-42787684)
chr3 (839-913)||(50260925-50260999)
chr3 (841-906)||(331879-331944)
chr3 (852-913)||(7981150-7981211)
chr3 (842-915)||(12744973-12745046)
chr3 (840-909)||(51239321-51239390)
chr3 (842-915)||(52215952-52216025)
[»] chr5 (36 HSPs)
chr5 (840-915)||(7313902-7313977)
chr5 (841-915)||(33075137-33075211)
chr5 (851-915)||(27895901-27895965)
chr5 (840-915)||(1098699-1098774)
chr5 (849-915)||(25713770-25713836)
chr5 (854-915)||(1098635-1098696)
chr5 (841-914)||(25408537-25408610)
chr5 (840-909)||(43506172-43506241)
chr5 (849-909)||(18261602-18261662)
chr5 (841-913)||(25408617-25408689)
chr5 (849-912)||(25792921-25792984)
chr5 (841-915)||(20019820-20019894)
chr5 (850-915)||(13654580-13654645)
chr5 (838-915)||(23420980-23421057)
chr5 (849-914)||(25358060-25358125)
chr5 (840-913)||(26300104-26300177)
chr5 (849-902)||(40515229-40515282)
chr5 (846-915)||(42247551-42247620)
chr5 (851-915)||(2673851-2673915)
chr5 (841-909)||(3851441-3851509)
chr5 (841-913)||(23914835-23914907)
chr5 (849-908)||(40100165-40100225)
chr5 (849-913)||(42013824-42013888)
chr5 (852-912)||(43506112-43506172)
chr5 (849-912)||(13654511-13654574)
chr5 (851-913)||(11262332-11262394)
chr5 (841-911)||(13356213-13356283)
chr5 (849-903)||(17225164-17225218)
chr5 (841-911)||(33684032-33684102)
chr5 (849-891)||(40515277-40515319)
chr5 (842-915)||(1996842-1996915)
chr5 (854-915)||(3100412-3100473)
chr5 (841-906)||(6763778-6763843)
chr5 (841-902)||(9707079-9707140)
chr5 (852-913)||(17967389-17967450)
chr5 (842-915)||(27314470-27314543)
[»] chr7 (32 HSPs)
chr7 (841-899)||(18654244-18654302)
chr7 (849-915)||(43813127-43813193)
chr7 (847-915)||(8169168-8169236)
chr7 (842-918)||(10095714-10095790)
chr7 (851-915)||(11602839-11602903)
chr7 (849-908)||(34840616-34840675)
chr7 (849-915)||(36547658-36547724)
chr7 (841-909)||(31417595-31417663)
chr7 (848-915)||(34478307-34478374)
chr7 (841-915)||(16777886-16777960)
chr7 (841-915)||(18654540-18654614)
chr7 (853-915)||(21099315-21099377)
chr7 (858-915)||(8169108-8169165)
chr7 (841-914)||(25245216-25245289)
chr7 (840-913)||(34703517-34703590)
chr7 (849-909)||(11602770-11602830)
chr7 (841-908)||(10422887-10422954)
chr7 (841-915)||(2360443-2360517)
chr7 (841-915)||(12274881-12274955)
chr7 (847-881)||(21857192-21857226)
chr7 (849-915)||(30457802-30457868)
chr7 (841-915)||(31319588-31319662)
chr7 (853-915)||(32599734-32599796)
chr7 (849-915)||(34840733-34840799)
chr7 (842-915)||(8571377-8571450)
chr7 (849-918)||(9555329-9555398)
chr7 (853-910)||(10599069-10599126)
chr7 (842-915)||(12274804-12274877)
chr7 (842-915)||(21103318-21103391)
chr7 (841-906)||(26824900-26824965)
chr7 (858-915)||(28752090-28752147)
chr7 (841-913)||(38238777-38238850)
[»] chr2 (23 HSPs)
chr2 (841-915)||(32316412-32316486)
chr2 (842-915)||(26229517-26229590)
chr2 (841-914)||(3123897-3123970)
chr2 (841-915)||(15119771-15119845)
chr2 (849-915)||(27964286-27964352)
chr2 (854-908)||(41824268-41824322)
chr2 (849-915)||(41824332-41824398)
chr2 (842-915)||(1961381-1961454)
chr2 (842-895)||(15446774-15446827)
chr2 (841-913)||(37195046-37195118)
chr2 (849-913)||(44274615-44274679)
chr2 (849-908)||(3123982-3124041)
chr2 (842-908)||(10221967-10222033)
chr2 (854-915)||(18731342-18731404)
chr2 (840-914)||(26836228-26836302)
chr2 (849-915)||(36547413-36547479)
chr2 (849-915)||(44274544-44274610)
chr2 (849-915)||(44587645-44587711)
chr2 (842-915)||(15446850-15446923)
chr2 (841-874)||(26234137-26234170)
chr2 (840-909)||(38594422-38594491)
chr2 (849-906)||(43542999-43543056)
chr2 (854-915)||(44094872-44094933)
[»] scaffold0059 (1 HSPs)
scaffold0059 (842-915)||(4445-4518)
[»] chr6 (19 HSPs)
chr6 (840-913)||(13276479-13276552)
chr6 (842-915)||(30422328-30422401)
chr6 (840-915)||(8449567-8449642)
chr6 (840-915)||(8458371-8458446)
chr6 (842-913)||(32254895-32254966)
chr6 (852-915)||(14173395-14173458)
chr6 (852-915)||(14177931-14177994)
chr6 (841-911)||(15718469-15718539)
chr6 (841-915)||(18886302-18886376)
chr6 (849-911)||(31632183-31632245)
chr6 (842-914)||(15836534-15836606)
chr6 (849-911)||(18491736-18491799)
chr6 (841-912)||(34379810-34379881)
chr6 (842-916)||(4844284-4844358)
chr6 (840-914)||(13277095-13277169)
chr6 (842-908)||(13462928-13462994)
chr6 (841-911)||(13463008-13463078)
chr6 (849-906)||(3203673-3203730)
chr6 (849-898)||(24110222-24110271)
[»] scaffold0149 (1 HSPs)
scaffold0149 (843-915)||(24678-24750)
[»] chr8 (26 HSPs)
chr8 (841-915)||(7410559-7410633)
chr8 (849-909)||(24820375-24820435)
chr8 (852-911)||(24820303-24820362)
chr8 (849-915)||(24418883-24418949)
chr8 (849-911)||(28882666-28882728)
chr8 (839-913)||(29424057-29424131)
chr8 (841-915)||(40640272-40640346)
chr8 (856-909)||(7428901-7428954)
chr8 (854-911)||(36307999-36308056)
chr8 (852-915)||(6260680-6260744)
chr8 (842-910)||(7377549-7377617)
chr8 (842-906)||(10117051-10117115)
chr8 (842-914)||(10934676-10934748)
chr8 (841-913)||(40098834-40098906)
chr8 (842-913)||(9056095-9056166)
chr8 (842-913)||(14381233-14381304)
chr8 (860-915)||(24418952-24419007)
chr8 (853-916)||(35781233-35781296)
chr8 (842-913)||(41387836-41387907)
chr8 (841-915)||(18018240-18018314)
chr8 (841-915)||(24287779-24287853)
chr8 (849-915)||(42749057-42749123)
chr8 (839-915)||(15037822-15037899)
chr8 (842-915)||(24053592-24053665)
chr8 (852-913)||(26014574-26014635)
chr8 (842-915)||(33070160-33070233)
[»] scaffold0024 (1 HSPs)
scaffold0024 (841-911)||(120139-120209)
[»] scaffold0148 (1 HSPs)
scaffold0148 (856-915)||(21193-21252)
[»] scaffold0039 (1 HSPs)
scaffold0039 (842-912)||(54463-54533)


Alignment Details
Target: chr4 (Bit Score: 782; Significance: 0; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 782; E-Value: 0
Query Start/End: Original strand, 8 - 829
Target Start/End: Complemental strand, 34137541 - 34136720
Alignment:
Q  8 tcatagaagccaaaggtattccagaaattgatctctctccaatattccacaatgaagttccaaatccatctgatattgaaaacttagtgaaggaaattgg 107  Q
    |||| ||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137541 tcattgaagccaaaggaattcccgtaattgacctctctccaatattccacaatgaagttccaaatccatctgatattgaaaacttagtgaaggaaattgg 34137442  T
Q  108 aagtgcatgcaaagagtggggtttcttccaagtcacaaaccatggagtcccttcgagtcttaggcagagacttgatgaagctgctaaattgttctttgct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137441 aagtgcatgcaaagagtggggtttcttccaagtcacaaaccatggagtcccttcgagtcttaggcagagacttgatgaagctgctaaattgttctttgct 34137342  T
Q  208 cagagtttggaggagaagaggaagattgctagagatgaaatcaatccaactggttattatgatacagaacacaccaaaaatgttagggactggaaagaag 307  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137341 cagagtttggaggagaagaggaaggttgctagagatgaaatcaatccaactggttattatgatacagaacacaccaaaaatgttagggactggaaagaag 34137242  T
Q  308 tgcttgattttctcgccaacgatcccactttggttcctctgaattctgatgaaaacgatgatcaagttattcaatggtctaatccatccccacaataccc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  34137241 tgcttgattttctcgccaacgatcccactttggttcctctgaattctgatgaaaacgatgatcaatttattcaatggtctaatccatccccacaattccc 34137142  T
Q  408 ttcacacttcaggtagttatatatttcatcttcaatggccatttcgattattcaaaagtatatttttaaaatttatgtgaacataagcagggctatagtt 507  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137141 ttcacacttcaggtagttatatatttcatcttcaatcgccatttagattattcaaaagtatatttttaaaatttatgtgaacataagcagggctatagtt 34137042  T
Q  508 gaagagtataatgaagagatggaaaagttggcttacaagttgcttgagctaatagctttgagcttaggagttgaagcaaagaggtttgaagagttcttca 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137041 gaagagtataatgaagagatggaaaagttggcttacaagttgcttgagctaatagctttgagcttaggagttgaagcaaagaggtttgaagagttcttca 34136942  T
Q  608 aagatcacactagctttattagattcaaccactatcctccatgcccttaccctcacctagctctcggcgttgggcgacacaaggatgctggtgccttaac 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34136941 aagatcacactagctttattagattcaaccactatcctccatgcccttaccctcacctagctctcggcgttgggcgacacaaggatgctggtgccttaac 34136842  T
Q  708 tattcttgcccaagatgatgttgggggtcttgaagtgaagcacaaagcatcacaagagtgggttcttgtgaaacctacctcagatgcttacattatcaac 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34136841 tattcttgcccaagatgatgttgggggtcttgaagtgaagcacaaagcatcacaagagtgggttcttgtgaaacctacctcagatgcttacattatcaac 34136742  T
Q  808 gtttgtgatattatccaggtac 829  Q
    ||||||||||||||||||||||    
T  34136741 gtttgtgatattatccaggtac 34136720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 425
Target Start/End: Complemental strand, 34141211 - 34140790
Alignment:
Q  1 ctctccctcatagaagccaaaggtattccagaaattgatctctctccaatattccacaatgaagttccaaatccatctgatattgaaaacttagtgaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  34141211 ctctccctcatagaagccaaaggtattccagaaattgatctctctccaatattccacaatgaagttccaaatccatctgctattgaaagcttagtcaagg 34141112  T
Q  101 aaattggaagtgcatgcaaagagtggggtttcttccaagtcacaaaccatggagtcccttcgagtcttaggcagagacttgatgaagctgctaaattgtt 200  Q
    | ||||||||||||||||||| |||||| |||||  |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||    
T  34141111 agattggaagtgcatgcaaagcgtggggattctttaaagtcacaaaccatggagtccctttgagtctcaggcagaggcttgatgaagctgctagattgtt 34141012  T
Q  201 ctttgctcagagtttggaggagaagaggaagattgctagagatgaaatcaatccaactggttattatgatacagaacacaccaaaaatgttagggactgg 300  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||| || |||| |||||| |||||||| |||  |    
T  34141011 ctttgctcagagtttggaggagaagaagaaggttgctagagatgagatcattccaactggttattatgacactgaactcaccaagaatgttagagacatg 34140912  T
Q  301 aaagaagtgcttgattttctcgccaacgatcccactttggttcctctgaattctgatgaaaacgatgatcaagttattcaatggtctaatccatccccac 400  Q
    ||||||||| ||||||||  | |||| ||   | ||||  ||||||| | | || ||||||| ||||||| |||||||||||||| ||||||| | || |    
T  34140911 aaagaagtgtttgatttttacaccaatga---ccctttctttcctctcactcctcatgaaaatgatgatcgagttattcaatggtgtaatccaacacctc 34140815  T
Q  401 aatacccttcacacttcaggtagtt 425  Q
     |||||||||| |||||||||||||    
T  34140814 catacccttcaaacttcaggtagtt 34140790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 425
Target Start/End: Complemental strand, 34133637 - 34133213
Alignment:
Q  1 ctctccctcatagaagccaaaggtattccagaaattgatctctctccaatattccacaatgaagttccaaatccatctgatattgaaaacttagtgaagg 100  Q
    |||||| |||| ||||||||||| ||||| |||||||| |||||||||||  | ||| ||| |||||||||||||||||||||||||||||| |||||||    
T  34133637 ctctccatcatcgaagccaaaggaattcccgaaattgacctctctccaattcttcaccatgcagttccaaatccatctgatattgaaaacttggtgaagg 34133538  T
Q  101 aaattggaagtgcatgcaaagagtggggtttcttccaagtcacaaaccatggagtcccttcgagtcttaggcagagacttgatgaagctgctaaattgtt 200  Q
    | |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||||    
T  34133537 agattggaagtgcaagcaaggagtggggtttctttcaagtcacaaaccatggagtccctttgagtctaaggcagagacttgaggaagcttctagattgtt 34133438  T
Q  201 ctttgctcagagtttggaggagaagaggaagattgctagagatgaaatcaatccaactggttattatgatacagaacacaccaaaaatgttagggactgg 300  Q
    |||||||||||||||||||||||||| |||| |||||||||||||  ||||||| |||||||||||||||||||| || |||||||||||||| ||||||    
T  34133437 ctttgctcagagtttggaggagaagaagaaggttgctagagatgaggtcaatcctactggttattatgatacagagcataccaaaaatgttagagactgg 34133338  T
Q  301 aaagaagtgcttgattttctcgccaacgatcccactttggttcctctgaattctgatgaaaacgatgatcaagttattcaatggtctaatccatccccac 400  Q
    ||||||||| ||||||||||  |  | ||||| || || ||||||| || |||||||||| | ||||||   |||||||||||| |||||| ||| || |    
T  34133337 aaagaagtgtttgattttctttctcaagatcctacattagttcctcggagttctgatgaacatgatgatggtgttattcaatggactaatcaatcacctc 34133238  T
Q  401 aatacccttcacacttcaggtagtt 425  Q
    |||| ||| |||| |||||||||||    
T  34133237 aatatcctccacaattcaggtagtt 34133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 472 - 829
Target Start/End: Complemental strand, 34131386 - 34131029
Alignment:
Q  472 tttaaaatttatgtgaacataagcagggctatagttgaagagtataatgaagagatggaaaagttggcttacaagttgcttgagctaatagctttgagct 571  Q
    ||||||||| ||||  |||| |||||||||||| |||||||||||| | ||||| |||||||| |||| || | |||||| |||||||||||| | ||||    
T  34131386 tttaaaattgatgtctacatgagcagggctatacttgaagagtatattcaagaggtggaaaagctggcatataggttgctggagctaatagctctaagct 34131287  T
Q  572 taggagttgaagcaaagaggtttgaagagttcttcaaagatcacactagctttattagattcaaccactatcctccatgcccttaccctcacctagctct 671  Q
    ||||| |||||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34131286 taggacttgaagcaaagaggtttgaagaattcttcaagtatcaaactagctttattagattcaaccactatcctccatgcccttaccctcacctagcact 34131187  T
Q  672 cggcgttgggcgacacaaggatgctggtgccttaactattcttgcccaagatgatgttgggggtcttgaagtgaagcacaaagcatcacaagagtgggtt 771  Q
     || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||  ||| ||   ||| | ||||||    
T  34131186 tggagttggacgacacaaggatgctggtgccttaactattcttgcccaagatgaggttggaggacttgaagtgaagcgtaaatcagaccaacaatgggtt 34131087  T
Q  772 cttgtgaaacctacctcagatgcttacattatcaacgtttgtgatattatccaggtac 829  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||| || |||||||    
T  34131086 cttgtgaaacctaccccagatgcttacattatcaatgttggtgatatcattcaggtac 34131029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 398
Target Start/End: Complemental strand, 34127357 - 34126967
Alignment:
Q  8 tcatagaagccaaaggtattccagaaattgatctctctccaatattccacaatgaagttccaaatccatctgatattgaaaacttagtgaaggaaattgg 107  Q
    |||| |||||| |||| ||||| |||||||| ||||| |||||||||||| ||||||||| | ||| ||||| |||||| | ||| |||||| | |||||    
T  34127357 tcattgaagccgaaggaattcccgaaattgacctctcaccaatattccaccatgaagttcaagatcaatctgctattgatagcttggtgaagaagattgg 34127258  T
Q  108 aagtgcatgcaaagagtggggtttcttccaagtcacaaaccatggagtcccttcgagtcttaggcagagacttgatgaagctgctaaattgttctttgct 207  Q
    |||||||||||| || ||||| ||||| ||||| ||||||||||  ||||||| |||| ||||||| ||||||||||||||||||| |||||||||||||    
T  34127257 aagtgcatgcaaggaatggggcttctttcaagttacaaaccatgaggtccctttgagtattaggcaaagacttgatgaagctgctagattgttctttgct 34127158  T
Q  208 cagagtttggaggagaagaggaagattgctagagatgaaatcaatccaactggttattatgatacagaacacaccaaaaatgttagggactggaaagaag 307  Q
    || |||||||||||||| | |||| |||| |||||||| ||||  |||| |||||||| ||||| ||| |||||||| ||||| ||  |||||| |||||    
T  34127157 caaagtttggaggagaaaatgaaggttgccagagatgagatcacaccaattggttattttgataaagagcacaccaagaatgtaagaaactggatagaag 34127058  T
Q  308 tgcttgattttctcgccaacgatcccactttggttcctctgaattctgatgaaaacgatgatcaagttattcaatggtctaatccatcccc 398  Q
    || |||||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  34127057 tgtttgattttttcgccagagatcccactttggttcctctgaattgtgatgaaaatgatgatcaagttattcaatggtctaatccgtcccc 34126967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 472 - 816
Target Start/End: Complemental strand, 34126244 - 34125900
Alignment:
Q  472 tttaaaatttatgtgaacataagcagggctatagttgaagagtataatgaagagatggaaaagttggcttacaagttgcttgagctaatagctttgagct 571  Q
    ||||||||| |||| ||||| ||||||  |||| |||||||||||| | | ||||||||||| ||||| |  |||||||| ||| |||||||||||||||    
T  34126244 tttaaaattaatgtcaacatgagcaggaatataattgaagagtatattaaggagatggaaaatttggcctctaagttgctggagttaatagctttgagct 34126145  T
Q  572 taggagttgaagcaaagaggtttgaagagttcttcaaagatcacactagctttattagattcaaccactatcctccatgcccttaccctcacctagctct 671  Q
    ||||  ||||||||| |||||||||||| |||||||| |||   |||||| |  ||||| |||| |||||||||||||| ||||  ||| | ||||||||    
T  34126144 tagggcttgaagcaatgaggtttgaagaattcttcaaggatacaactagcgtgtttagaatcaatcactatcctccatgtccttctcctgagctagctct 34126045  T
Q  672 cggcgttgggcgacacaaggatgctggtgccttaactattcttgcccaagatgatgttgggggtcttgaagtgaagcacaaagcatcacaagagtgggtt 771  Q
     ||| | ||  ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||  ||   |||||||| ||||||    
T  34126044 tggcatgggaagacacaaggatgctggtgccttaactattcttgcccaagatgaggttgctggtcttgaagtgaagcatcaaatttcacaagaatgggtt 34125945  T
Q  772 cttgtgaaacctacctcagatgcttacattatcaacgtttgtgat 816  Q
    ||||||||||| ||| || |||||| ||| ||||||||| |||||    
T  34125944 cttgtgaaacccaccccaaatgctttcatcatcaacgttggtgat 34125900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 470 - 829
Target Start/End: Complemental strand, 34140237 - 34139878
Alignment:
Q  470 tttttaaaatttatgtgaacataagcagggctatagttgaagagtataatgaagagatggaaaagttggcttacaagttgcttgagctaatagctttgag 569  Q
    ||||||||||| |||| ||||| || || | |||| ||||||||||||  ||||||||||||||| ||||    |||||  | ||||| |||||||| ||    
T  34140237 tttttaaaattgatgtcaacatgagtagagttataattgaagagtatatcgaagagatggaaaagctggcccgtaagttattggagcttatagctttaag 34140138  T
Q  570 cttaggagttgaagcaaagaggtttgaagagttcttcaaagatcacactagctttattagattcaaccactatcctccatgcccttaccctcacctagct 669  Q
    ||||||| |||||||||||||||||||||| ||||||||  |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  34140137 cttaggacttgaagcaaagaggtttgaagaattcttcaagtatcaaactagctttataagattcaactactatcctccatgcccttaccctcacctagct 34140038  T
Q  670 ctcggcgttgggcgacacaaggatgctggtgccttaactattcttgcccaagatgatgttgggggtcttgaagtgaagcacaaagcatcacaagagtggg 769  Q
    || ||| ||||  |||||||||||||||||||||| ||||||||| ||| | |||| ||||  ||||||||||||||||  ||| ||   ||| |  |||    
T  34140037 cttggccttggaagacacaaggatgctggtgccttgactattcttaccctaaatgaggttgaaggtcttgaagtgaagcgtaaaacagatcaacaacggg 34139938  T
Q  770 ttcttgtgaaacctacctcagatgcttacattatcaacgtttgtgatattatccaggtac 829  Q
    ||||||| |||||||||  |||| | || ||||||||| || | | |||||| |||||||    
T  34139937 ttcttgtaaaacctacccgagatccgtatattatcaacattggcggtattattcaggtac 34139878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 509 - 829
Target Start/End: Complemental strand, 34142847 - 34142524
Alignment:
Q  509 aagagtataatgaagagatggaaaagttggcttacaagttgcttgagctaatagctttgagcttaggagttgaagcaaagaggtttgaagagttcttca- 607  Q
    ||||||||| | |||||||||||||| | || |  | |||||| ||||| |||||| | |||||||||||||||||||||||||||||||| |||||||     
T  34142847 aagagtatattaaagagatggaaaagctagcctttacgttgctagagctcatagctcttagcttaggagttgaagcaaagaggtttgaagaattcttcat 34142748  T
Q  608 --aagatcacactagctttattagattcaaccactatcctccatgcccttaccctcacctagctctcggcgttgggcgacacaaggatgctggtgcctta 705  Q
      ||||||| ||||||||| ||||| | ||||| |||||||||||||||||||||||||| ||||| || | ||| | ||| |||||| |||||||||||    
T  34142747 caaagatcaaactagctttcttagacttaaccattatcctccatgcccttaccctcaccttgctcttggtgctggtccacataaggattctggtgcctta 34142648  T
Q  706 actattcttgcccaagatgatgttgggggtcttgaagtgaagcacaaagcatcacaagagtgggttcttgtgaaacctacctcagatgcttacattatca 805  Q
    |||||||||||||||||||| ||||| || |||||||||||||  ||| ||   ||| ||||||||||||||||||| ||  |||||||||| ||||| |    
T  34142647 actattcttgcccaagatgaggttggaggacttgaagtgaagcggaaaacagatcaacagtgggttcttgtgaaacccacaccagatgcttatattatta 34142548  T
Q  806 acgtttgtgatattatccaggtac 829  Q
    | ||| ||||| | || |||||||    
T  34142547 atgttggtgatgtcattcaggtac 34142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 108 - 418
Target Start/End: Complemental strand, 34143587 - 34143277
Alignment:
Q  108 aagtgcatgcaaagagtggggtttcttccaagtcacaaaccatggagtcccttcgagtcttaggcagagacttgatgaagctgctaaattgttctttgct 207  Q
    |||||| ||||| || ||||||||||||||||| ||||| ||||| |||||| | | ||| ||||  | | | || |||||| ||||  ||||||| ||     
T  34143587 aagtgcttgcaaggaatggggtttcttccaagttacaaatcatggtgtccctcccactctaaggctcaaaatggaagaagcttctaagatgttcttcgca 34143488  T
Q  208 cagagtttggaggagaagaggaagattgctagagatgaaatcaatccaactggttattatgatacagaacacaccaaaaatgttagggactggaaagaag 307  Q
    |||||  ||||||| |||| ||||||| | | |||||| | |  |    |||||||| |||||||||| |||||||| ||||| || |||||||||||||    
T  34143487 cagagcctggaggataagaagaagattaccacagatgataccggtttgcctggttatcatgatacagagcacaccaagaatgtaagagactggaaagaag 34143388  T
Q  308 tgcttgattttctcgccaacgatcccactttggttcctctgaattctgatgaaaacgatgatcaagttattcaatggtctaatccatccccacaataccc 407  Q
    || ||||||||||| | || || || ||||||||||||||||||||||||||| ||||||||||||| | | | ||| ||||||||||||| ||||||||    
T  34143387 tgtttgattttctctctaatgaccctactttggttcctctgaattctgatgaacacgatgatcaagtcacttactggactaatccatcccctcaataccc 34143288  T
Q  408 ttcacacttca 418  Q
    | |||||||||    
T  34143287 tccacacttca 34143277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 34136676 - 34136602
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34136676 atacaccatccggtcactattataagtaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 34136602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 19934632 - 19934706
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||||||||||||||| | || |||| || |||||||||||||||| |||||||||||||    
T  19934632 atacaccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctat 19934706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 54164807 - 54164881
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||||||||||||||| | || |||| || |||||||||||||||| |||||||||||||    
T  54164807 atacaccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctat 54164881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 842 - 909
Target Start/End: Original strand, 29006830 - 29006897
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||||||||||||||||||||||||| |  |||||| || |||||||||||||||| |||||||    
T  29006830 tacaccatccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtg 29006897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 841 - 912
Target Start/End: Complemental strand, 54164959 - 54164888
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||| ||||||||||||||||||||||| |  |||||| || |||||||||||||||| ||||||||||    
T  54164959 atacaccctccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtc 54164888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 853 - 915
Target Start/End: Original strand, 37255688 - 37255750
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||  ||||| || |||||||||||||||| |||||||||||||    
T  37255688 gtcactattataagcaaaagttggttttttagattcattcaataaatgatgtatgtggtctat 37255750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 840 - 915
Target Start/End: Complemental strand, 3094413 - 3094338
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||| || ||||||||||||||||| |||||||| | |||| || |||||||||||||||| |||||| ||||||    
T  3094413 catactccctccggtcactattataaccaaaagttgactttttaggttcattcaataaatgacgtatgtagtctat 3094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 852 - 915
Target Start/End: Original strand, 15659940 - 15660003
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||| ||||||||||||| |||| || |||||||||||||||| |||||| ||||||    
T  15659940 ggtcactattacaagcaaaagttcactttttaggttcattcaataaatgatgtatgtagtctat 15660003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 841 - 912
Target Start/End: Complemental strand, 19934784 - 19934713
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||| |||| |||||||||||||||||| |  |||||| || |||||||||||||||| ||||||||||    
T  19934784 atacaccctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtc 19934713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 840 - 915
Target Start/End: Complemental strand, 29006982 - 29006907
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| | ||||||||||||||||||||||| | || |||| |  |||||||||||||||| |||||||||||||    
T  29006982 catacatcctccggtcactattataagcaaaattccactttttaaattcattcaataaatgatgtatgtggtctat 29006907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 20788173 - 20788107
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||| ||||||||  || |||||||| ||||||  |||||||||||||    
T  20788173 tccggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 20788107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 52914144 - 52914070
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||  |||||||||||||||||||| || || ||| || |||||||| ||||||| |||||||||||||    
T  52914144 atacaccataaggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctat 52914070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 844 - 913
Target Start/End: Original strand, 20215564 - 20215633
Alignment:
Q  844 caccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||| ||||||||||||||||||||||| || |  ||| || |||||||||||||||| |||||||||||    
T  20215564 caccctccggtcactattataagcaaaaattgacattttaggttcattcaataaatgatgtatgtggtct 20215633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 852 - 901
Target Start/End: Original strand, 22020121 - 22020170
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  22020121 ggtcactattataagcaaaagttcactttttagattcattcaataaatga 22020170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 847 - 915
Target Start/End: Complemental strand, 6462852 - 6462784
Alignment:
Q  847 catccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| ||||| || |||||| || |||||||||||||||| ||||||| |||||    
T  6462852 catccggccactattataaacaaaattttattttttagattcattcaataaatgatgtatgtgatctat 6462784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 841 - 916
Target Start/End: Original strand, 12927103 - 12927178
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatg 916  Q
    ||||||| || |||||||||||||||||||| ||||||||  || |||||||| ||||||  ||| ||||||||||    
T  12927103 atacaccctcaggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtacgtggtctatg 12927178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 841 - 912
Target Start/End: Complemental strand, 55936133 - 55936062
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||||| ||||||||||||||||||||| |  || ||| || |||||||| ||||||| ||||||||||    
T  55936133 atacaccatacggtcactattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtggtc 55936062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 3740446 - 3740380
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||| |||||||||||||| | |||| || |||||||||||||||| | |||| ||||||    
T  3740446 tccggtcactaatataagcaaaagttgactttttaggttcattcaataaatgatgcatgtagtctat 3740380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 4983357 - 4983291
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| |||||||||||||||||| ||||||||  || |||||||| ||||||  |||||||||||||    
T  4983357 tccgatcactattataagcaaaacttcattttctaggttcattcattaaatgttgtatgtggtctat 4983291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 24851405 - 24851479
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| || |||||||||||||||||||| ||||||||  || |||||||| ||||||  |||||| ||||||    
T  24851405 atacaccctctggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgttgtctat 24851479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 26920666 - 26920740
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||||||||||| ||  | ||| || |||||||  ||||||| ||| |||||||||    
T  26920666 atacaccatccggtcactattataagcaaaattttgtattttagattcattcgttaaatgatgtacgtggtctat 26920740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 28702207 - 28702133
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||||    
T  28702207 atacaccctccggtcactaatataagcaaaagtttgatttttaggttcattcattaaatgacgtatgtagtctat 28702133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 913
Target Start/End: Original strand, 28702054 - 28702127
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||||| ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||    
T  28702054 catacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtct 28702127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 849 - 914
Target Start/End: Original strand, 54106477 - 54106542
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||| | ||||||||||| ||||| ||| || |||||||||||||||| |||||| |||||    
T  54106477 tccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtcta 54106542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 851 - 915
Target Start/End: Complemental strand, 16667199 - 16667135
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||| ||||||| |  ||| |  |||||||||||||||| |||||||||||||    
T  16667199 cggtcactattataagtaaaagttgacattttacgttcattcaataaatgatgtatgtggtctat 16667135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 842 - 906
Target Start/End: Original strand, 20598252 - 20598316
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    |||||||||||||||| | ||||||||||| ||||| ||| || | |||||||||||||| ||||    
T  20598252 tacaccatccggtcacaaatataagcaaaaattcatgttttagatacattcaataaatgatgtat 20598316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 853 - 913
Target Start/End: Complemental strand, 35005189 - 35005129
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| |||||||||||| |||| |||| || |||||||||||||| | |||||||||||    
T  35005189 gtcactgttataagcaaaaattcaatttttagattcattcaataaataatgtatgtggtct 35005129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 852 - 908
Target Start/End: Complemental strand, 37255816 - 37255760
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||| | ||||||    
T  37255816 ggtcactattataagcaaaagttcactttttaaattcattcaataaattatgtatgt 37255760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 849 - 900
Target Start/End: Original strand, 20788038 - 20788089
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatg 900  Q
    ||||||||||||||||||||||| ||||| ||| || |||||||| ||||||    
T  20788038 tccggtcactattataagcaaaaattcatattttaggttcattcattaaatg 20788089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 840 - 915
Target Start/End: Complemental strand, 21587065 - 21586990
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||| ||||||  ||||| |  | |||| || |||||||||||||||| |||||| ||||||    
T  21587065 catacaccatccggtcacaattatagtcaaaaataaactttttagattcattcaataaatgatgtatgtagtctat 21586990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 849 - 900
Target Start/End: Original strand, 31280335 - 31280386
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatg 900  Q
    |||||||||||||||||||||||   ||||||| || |||||||||||||||    
T  31280335 tccggtcactattataagcaaaacaccattttttagattcattcaataaatg 31280386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 846 - 913
Target Start/End: Complemental strand, 45828638 - 45828571
Alignment:
Q  846 ccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||||| |||||||||| ||||||| |||||| |   ||||||||||||||| ||||| |||||    
T  45828638 ccatccggtctctattataagtaaaagttgattttttatggtcattcaataaatgatgtatgaggtct 45828571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 846 - 912
Target Start/End: Original strand, 2401039 - 2401105
Alignment:
Q  846 ccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||| ||||| ||||||||||||||||| | |||| |  |||||||||||||||| |||| |||||    
T  2401039 ccatctggtcattattataagcaaaagttaactttttaaattcattcaataaatgatgtatttggtc 2401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 907
Target Start/End: Original strand, 3504071 - 3504137
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatg 907  Q
    |||||||||||  |||||| ||||| ||||| ||||||||| || |||||||||| ||||| |||||    
T  3504071 atacaccatccaatcactaatataaacaaaaattcattttttagattcattcaattaatgatgtatg 3504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 853 - 915
Target Start/End: Original strand, 4386329 - 4386391
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||| | |||| || || ||| | ||||||| |||||||||||||    
T  4386329 gtcactattataagcaaaagttgactttttagattaatttattaaatgatgtatgtggtctat 4386391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 4406235 - 4406309
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||||||| |||| |  |  ||| || || ||||| ||||||| |||||||||||||    
T  4406235 atacaccatccggtcactattataagtaaaaatcaacattttagatttattcattaaatgatgtatgtggtctat 4406309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 854 - 908
Target Start/End: Original strand, 5535721 - 5535775
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||| |||||||||||  |||||||| || |||||||||||||||| ||||||    
T  5535721 tcactagtataagcaaaaactcattttttagattcattcaataaatgatgtatgt 5535775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 5535851 - 5535785
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| |||||||||||||||||| || | || | || |||||||||||| ||| |||||||||||||    
T  5535851 tccgatcactattataagcaaaaattgacttgttaggttcattcaataactgatgtatgtggtctat 5535785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 853 - 915
Target Start/End: Complemental strand, 6087567 - 6087505
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||| ||||||||||||| || | ||||||| || ||||||||||||| |||||| ||||||    
T  6087567 gtcacaattataagcaaaaatttaattttcagatttattcaataaatgatgtatgtagtctat 6087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 854 - 908
Target Start/End: Complemental strand, 26636573 - 26636519
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||||||||| |||| || |||||| || |||||||||||||||| ||||||    
T  26636573 tcactattataagtaaaaatttattttttagattcattcaataaatgatgtatgt 26636519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 851 - 901
Target Start/End: Complemental strand, 28815919 - 28815869
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    |||||||||||||||||||||||| | |||| || |||||| |||||||||    
T  28815919 cggtcactattataagcaaaagttgactttttaggttcatttaataaatga 28815869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 871
Target Start/End: Original strand, 52281112 - 52281142
Alignment:
Q  841 atacaccatccggtcactattataagcaaaa 871  Q
    |||||||||||||||||||||||||||||||    
T  52281112 atacaccatccggtcactattataagcaaaa 52281142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 853 - 914
Target Start/End: Original strand, 3094273 - 3094334
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||||||| ||||| || |||||| |  |||||||||||||||| |||| |||||||    
T  3094273 gtcactattataaacaaaaatttattttttatattcattcaataaatgatgtatatggtcta 3094334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 855 - 908
Target Start/End: Complemental strand, 11796716 - 11796663
Alignment:
Q  855 cactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||||||||||||| |||| |||| || || ||||||||||||| ||||||    
T  11796716 cactattataagcaaaaattcactttttagatttattcaataaatgatgtatgt 11796663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 853 - 906
Target Start/End: Complemental strand, 20215693 - 20215640
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||||| |||||||||||| || ||| || |||||||||||||||| ||||    
T  20215693 gtcactattttaagcaaaagttgatattttagattcattcaataaatgatgtat 20215640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 852 - 913
Target Start/End: Original strand, 24941116 - 24941177
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||||||||||    
T  24941116 ggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtct 24941177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Complemental strand, 33037013 - 33036980
Alignment:
Q  838 ggcatacaccatccggtcactattataagcaaaa 871  Q
    |||||||||| |||||||||||||||||||||||    
T  33037013 ggcatacaccctccggtcactattataagcaaaa 33036980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 839 - 908
Target Start/End: Original strand, 44171426 - 44171495
Alignment:
Q  839 gcatacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||| || |||||| | |||||||| |||||||| |||||| |  |||||||||||||||| ||||||    
T  44171426 gcatactccctccggttattattataaacaaaagttaattttttaaattcattcaataaatgatgtatgt 44171495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 853 - 906
Target Start/End: Complemental strand, 44171565 - 44171513
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    |||||||||||||||||||||| |||||| || |||||||| ||||||| ||||    
T  44171565 gtcactattataagcaaaagttgattttt-aggttcattcattaaatgatgtat 44171513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 2e-18; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 840 - 912
Target Start/End: Original strand, 52923316 - 52923388
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    |||||||| ||||||||||||||||||||||| |||| |||| || |||||||||||||||| ||||||||||    
T  52923316 catacaccctccggtcactattataagcaaaatttcactttttaggttcattcaataaatgatgtatgtggtc 52923388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 849 - 916
Target Start/End: Original strand, 5431343 - 5431410
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatg 916  Q
    ||||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||| |||||||    
T  5431343 tccggtcactattataagcaaaaattcactttttagattcattcaataaatgaagtatgttgtctatg 5431410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 851 - 915
Target Start/End: Complemental strand, 42660491 - 42660427
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||||||||||| |   ||||||||||||||| |||||||||||||    
T  42660491 cggtcactattataagcaaaagttcattttttaaaatcattcaataaatgatgtatgtggtctat 42660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 852 - 915
Target Start/End: Original strand, 52112881 - 52112944
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||||| |||||||||||||    
T  52112881 ggtcactattataagcaaaagttcactttttatattcattcaataaatgatgtatgtggtctat 52112944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 19175590 - 19175656
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||| |||| |||| |||| || |||||||||||||||| |||||||||||||    
T  19175590 tccggtcactattataagtaaaatttcactttttaggttcattcaataaatgatgtatgtggtctat 19175656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 1602962 - 1602889
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||| ||||||||||||||||||| ||||||||| || |||||||| ||||||  |||||||||||||    
T  1602962 tacaccctccagtcactattataagcaaaaattcattttttaggttcattcattaaatgttgtatgtggtctat 1602889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 840 - 911
Target Start/End: Original strand, 23944030 - 23944101
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||||||| ||||||||||| ||||||||||| ||||||||| || | |||||||| ||||| |||||||||    
T  23944030 catacaccctccggtcactaatataagcaaaaattcattttttagatacattcaattaatgatgtatgtggt 23944101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 10256783 - 10256849
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| ||||||||||||| |||| |||| |||| || |||||||||||||||| |||||||||||||    
T  10256783 tccgatcactattataagaaaaaattcactttttagattcattcaataaatgatgtatgtggtctat 10256849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 48083498 - 48083572
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| || |||||||||||||||||||| || || ||| || |||||||| ||||||| |||||||||||||    
T  48083498 atacaccctctggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctat 48083572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 849 - 914
Target Start/End: Complemental strand, 5431478 - 5431413
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||||| ||||||||||| || | |||| || |||||||||||||||| ||||||||||||    
T  5431478 tccggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgtggtcta 5431413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 841 - 909
Target Start/End: Complemental strand, 14214675 - 14214607
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    ||||||| |||||||||||||||||||||||  | | |||| || |||||||||||||||| |||||||    
T  14214675 atacaccctccggtcactattataagcaaaaacttactttttaggttcattcaataaatgatgtatgtg 14214607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 854 - 914
Target Start/End: Original strand, 34597527 - 34597587
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||||||||||||||||| |||| |||| || ||||||||| |||||| ||||||||||||    
T  34597527 tcactattataagcaaaaattcactttttagattcattcaacaaatgatgtatgtggtcta 34597587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 841 - 901
Target Start/End: Original strand, 51022711 - 51022771
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    ||||||| ||| |||||||||||||||||||||| || ||| || ||||||||||||||||    
T  51022711 atacaccttccagtcactattataagcaaaagttgatattttagattcattcaataaatga 51022771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 849 - 916
Target Start/End: Complemental strand, 1409187 - 1409120
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatg 916  Q
    ||||||||||||||||||||||| ||   |||| || |||||||||||||||| ||||| ||||||||    
T  1409187 tccggtcactattataagcaaaaattatctttttagattcattcaataaatgatgtatgcggtctatg 1409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 842 - 913
Target Start/End: Complemental strand, 8258088 - 8258017
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| ||||||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||||||||||    
T  8258088 tacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtct 8258017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 842 - 913
Target Start/End: Complemental strand, 11989454 - 11989383
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||||||||||||| ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||    
T  11989454 tacaccatccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtct 11989383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 841 - 900
Target Start/End: Original strand, 14214544 - 14214603
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatg 900  Q
    ||||||| ||||||||||||||||||||||| |||| |||| || |||||||||| ||||    
T  14214544 atacaccctccggtcactattataagcaaaaattcactttttaggttcattcaattaatg 14214603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 840 - 911
Target Start/End: Complemental strand, 19175735 - 19175664
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||||||| ||| ||||||||||||||||||| |  | |||| || |||||||||||||||| |||||||||    
T  19175735 catacaccctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgtggt 19175664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 849 - 908
Target Start/End: Complemental strand, 19580331 - 19580272
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||||||||||||| |||||||  |||||| || |||||||||||||||| ||||||    
T  19580331 tccggtcactattataaacaaaagtatattttttagattcattcaataaatgatgtatgt 19580272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 842 - 909
Target Start/End: Original strand, 34658381 - 34658448
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||||||||||||| ||||||||||| |||| ||||||| | |||| ||| ||||| |||||||    
T  34658381 tacaccatccggtcactaatataagcaaaaattcacttttcagatacatttaattaatgatgtatgtg 34658448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 852 - 915
Target Start/End: Original strand, 42915652 - 42915715
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||| |||||||||||||| |||||| || |||||||||||||||| | |||| ||||||    
T  42915652 ggtcactaatataagcaaaagttgattttttaggttcattcaataaatgatgcatgtagtctat 42915715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 853 - 915
Target Start/End: Complemental strand, 2122703 - 2122641
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||| | ||||||| || |||||||| ||||||  |||||||||||||    
T  2122703 gtcactattataagcaaaaatccattttttagattcattcattaaatgttgtatgtggtctat 2122641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 34768416 - 34768350
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||||||| | |||| || ||||||||| |||| | ||||||| |||||    
T  34768416 tccggtcactattataagcaaaagttgactttttaggttcattcaacaaataatgtatgtgatctat 34768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 38834613 - 38834679
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||| || |||||| || |||||| ||||||||| |||| | ||||||    
T  38834613 tccggtcactattataagcaaaaatttattttttagattcattaaataaatgatgtatatagtctat 38834679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 856 - 906
Target Start/End: Original strand, 42660366 - 42660416
Alignment:
Q  856 actattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||||||||||||||| |||||| || |||||||||||||||| ||||    
T  42660366 actattataagcaaaagttgattttttagattcattcaataaatgatgtat 42660416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 913
Target Start/End: Complemental strand, 33604138 - 33604065
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  33604138 catacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 33604065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 846 - 915
Target Start/End: Complemental strand, 47446772 - 47446703
Alignment:
Q  846 ccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||| ||||  ||| |||| |  |||||||||||||||| |||||| ||||||    
T  47446772 ccatccggtcactattataagtaaaaactcactttttaaattcattcaataaatgatgtatgtagtctat 47446703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 901
Target Start/End: Complemental strand, 35156389 - 35156329
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    ||||||||||||||||||| ||||||||||||||   |||| || |||||||| |||||||    
T  35156389 atacaccatccggtcactaatataagcaaaagttttatttttagattcattcattaaatga 35156329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 901
Target Start/End: Original strand, 46412697 - 46412757
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    |||||||||||| |||||||||||||||||| || || ||| || |||||||| |||||||    
T  46412697 atacaccatccgatcactattataagcaaaaattaatattttagattcattcattaaatga 46412757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 48022589 - 48022661
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||| ||||||||||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  48022589 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 48022661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 913
Target Start/End: Original strand, 639794 - 639865
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| ||||||||||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  639794 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 639865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 841 - 908
Target Start/End: Original strand, 1035881 - 1035948
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||||||||| |||||| ||||||||||| | || |||  || |||||||||||||||| ||||||    
T  1035881 atacaccatccgatcactaatataagcaaaaatccagtttctagattcattcaataaatgatgtatgt 1035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 840 - 915
Target Start/End: Original strand, 11989302 - 11989377
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||| ||||||||||  ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||||    
T  11989302 catacaccctccggtcactgatataagcaaaagtttgatttttaggttcattcattaaatgacgtatgtagtctat 11989377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 839 - 914
Target Start/End: Original strand, 15351707 - 15351782
Alignment:
Q  839 gcatacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||| ||||||||| | ||||||||||| || || ||| |  |||||||||||||||| |||||| |||||    
T  15351707 gcatacaccctccggtcacaaatataagcaaaaatttatattttaaattcattcaataaatgatgtatgttgtcta 15351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 909
Target Start/End: Complemental strand, 35367623 - 35367556
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||| ||||||||||| ||||||||||| | ||||||| || | |||||||| ||||| |||||||    
T  35367623 tacaccctccggtcactactataagcaaaaatccattttttagatacattcaattaatgatgtatgtg 35367556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 909
Target Start/End: Complemental strand, 52923468 - 52923401
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||| || |||||||||||||||||||| |  | |||| || |||||||||||||||| |||||||    
T  52923468 tacaccctcaggtcactattataagcaaaaatctactttttaggttcattcaataaatgatgtatgtg 52923401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 853 - 911
Target Start/End: Original strand, 6340565 - 6340623
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||||||||||||| |||  ||||||||| || ||||||||||||||||  ||||||||    
T  6340565 gtcactattataagtaaatattcattttttaggttcattcaataaatgatatatgtggt 6340623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 29302211 - 29302137
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| ||||||||||| ||   |||| || |||||||| ||||||| |||||| ||||||    
T  29302211 atacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgtagtctat 29302137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 840 - 874
Target Start/End: Complemental strand, 33939444 - 33939410
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagtt 874  Q
    |||||||| ||||||||||||||||||||||||||    
T  33939444 catacaccctccggtcactattataagcaaaagtt 33939410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 849 - 914
Target Start/End: Original strand, 14958683 - 14958748
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||| | ||||||||||| ||||  ||| || |||||||||||||||| |||||| |||||    
T  14958683 tccggtcacaaatataagcaaaacttcaaattttagattcattcaataaatgatgtatgttgtcta 14958748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 871
Target Start/End: Complemental strand, 18353717 - 18353688
Alignment:
Q  842 tacaccatccggtcactattataagcaaaa 871  Q
    ||||||||||||||||||||||||||||||    
T  18353717 tacaccatccggtcactattataagcaaaa 18353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 861 - 914
Target Start/End: Complemental strand, 34597639 - 34597586
Alignment:
Q  861 tataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||||| |||| |||| || ||||||||| |||||| ||||||||||||    
T  34597639 tataagcaaaaattcactttttagattcattcaacaaatgatgtatgtggtcta 34597586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 34953891 - 34953964
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||| ||||||||||||||||||| |  || ||| |  |||||||| ||||||| |||||||||||||    
T  34953891 tacaccctccagtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtggtctat 34953964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 844 - 913
Target Start/End: Complemental strand, 34954039 - 34953970
Alignment:
Q  844 caccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||| |||| |||||||||||||||||| || || ||| || |||||||||| ||||| |||| ||||||    
T  34954039 caccctccgatcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtct 34953970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 914
Target Start/End: Original strand, 47446626 - 47446699
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||| |||||| ||||||||||||| |||||||| |||||| || || |||| |||||| | ||||||| ||||    
T  47446626 atactccatccagtcactattataaacaaaagttaattttttaggttaattctataaattatgtatgtgatcta 47446699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 6e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 840 - 915
Target Start/End: Complemental strand, 2128508 - 2128433
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||| || |||||||||||||||| |||||||||||||    
T  2128508 catacaccctccagtcactattataagcaaaaattcatgttttagattcattcaataaatgatgtatgtggtctat 2128433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 841 - 918
Target Start/End: Original strand, 22496945 - 22497022
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatgat 918  Q
    ||||||| ||| ||||||||||||||||||| || || ||| || |||||||| ||||||| ||||||||||||||||    
T  22496945 atacaccctccagtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctatgat 22497022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 849 - 908
Target Start/End: Original strand, 4190631 - 4190690
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||||||| | ||||||    
T  4190631 tccggtcactattataagaaaaaattcattttttagtttcattcaataaattatgtatgt 4190690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 854 - 915
Target Start/End: Complemental strand, 4190761 - 4190700
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||| ||||| |||||||    
T  4190761 tcactattataagcaaaagttgactttttaggttcattcaataaatgatgtatgaggtctat 4190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 841 - 913
Target Start/End: Complemental strand, 10872818 - 10872746
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||| ||||||||||||||||||||||| || || ||| || |||||||||| ||||| |||| ||||||    
T  10872818 atacaccctccggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtct 10872746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 851 - 915
Target Start/End: Original strand, 36571379 - 36571443
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||||  ||||| || || ||||||||||||| |||||| ||||||    
T  36571379 cggtcactattataagcaaaagtttcttttttagatttattcaataaatgatgtatgtagtctat 36571443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 841 - 900
Target Start/End: Original strand, 12708682 - 12708741
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatg 900  Q
    ||||||| ||||||||||||||||||||||| ||||||||  || |||||||| ||||||    
T  12708682 atacaccctccggtcactattataagcaaaaattcattttctaggttcattcattaaatg 12708741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 105509 - 105443
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||| ||||||||||||||| | |||| || ||||||||||| || | |||||||||||||    
T  105509 tccggtcacttttataagcaaaagttgactttttaggttcattcaatacattatgtatgtggtctat 105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 611576 - 611650
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| ||||| ||||||||||||||| |||||||  ||||| || || ||||||||||||| |||||| ||||||    
T  611576 atactccatctggtcactattataagtaaaagtttgttttttagattaattcaataaatgatgtatgtagtctat 611650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 611719 - 611653
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||||||| | |||| || || ||||| ||||| | |||||||||||||    
T  611719 tccggtcactattataagcaaaagttgactttttaggttaattcattaaataatgtatgtggtctat 611653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 45736681 - 45736755
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||||||||||||||| |  ||  || || |||||||| ||||||| |||||||||||||    
T  45736681 atacaccctccggtcactattataagcaaaaatcgatagtttagattcattcattaaatgatgtatgtggtctat 45736755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 841 - 914
Target Start/End: Original strand, 26367465 - 26367538
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||| ||||||||| | ||||||||||| | ||| ||| || |||||||||||||||| |||||| |||||    
T  26367465 atacaccctccggtcacaaatataagcaaaaatccatgttttagattcattcaataaatgatgtatgttgtcta 26367538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 848 - 901
Target Start/End: Complemental strand, 36566774 - 36566721
Alignment:
Q  848 atccggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    |||||||||||||||||||||||||||   |||| || ||||||||||||||||    
T  36566774 atccggtcactattataagcaaaagttttctttttagattcattcaataaatga 36566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 854 - 915
Target Start/End: Complemental strand, 39836998 - 39836937
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||  ||||||| | |||| || |||||||||||||||| |||||||||||||    
T  39836998 tcactattataaataaaagtttactttttagattcattcaataaatgatgtatgtggtctat 39836937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 40470563 - 40470490
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||| ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||||    
T  40470563 tacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacgtatgtagtctat 40470490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 841 - 910
Target Start/End: Complemental strand, 50603659 - 50603590
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtgg 910  Q
    ||||| ||| ||||||||||||||||||||| |  |||||| |  |||||||||||||||| ||||||||    
T  50603659 atacatcattcggtcactattataagcaaaaatctattttttaagttcattcaataaatgatgtatgtgg 50603590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 909
Target Start/End: Original strand, 105366 - 105434
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||| |||||||||||||||| ||| ||||| |||| |||| || |||||| ||||||||| |||||||    
T  105366 atactccatccggtcactattgtaaacaaaaattcactttttagattcattgaataaatgatgtatgtg 105434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 913
Target Start/End: Complemental strand, 35572146 - 35572074
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||||||||||  | ||||||||||| ||||| |||  | |||||||||||||||  |||||||||||    
T  35572146 atacaccatccggtcataaatataagcaaaaattcatgttttgggttcattcaataaatgttgtatgtggtct 35572074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 901
Target Start/End: Complemental strand, 42787753 - 42787701
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatga 901  Q
    |||| |||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  42787753 tccgatcactattataaacaaaaattcattttttaggttcattcaataaatga 42787701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 913
Target Start/End: Original strand, 52931643 - 52931707
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||||| ||||||||||| |||||| || || | |||||||| ||||| |||||||||||    
T  52931643 tccggtcactaatataagcaaaaattcattctttagatacattcaattaatgatgtatgtggtct 52931707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 851 - 901
Target Start/End: Original strand, 13900232 - 13900283
Alignment:
Q  851 cggtcactattataagcaaaagttca-tttttcagtttcattcaataaatga 901  Q
    ||||||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  13900232 cggtcactattataagcaaaaattcacttttttagattcattcaataaatga 13900283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 841 - 912
Target Start/End: Original strand, 54595784 - 54595855
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||||| ||||||||||||||||||||| |  |  ||| || |||||||| ||||||| ||||||||||    
T  54595784 atacaccatacggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtc 54595855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 853 - 915
Target Start/End: Original strand, 24722693 - 24722755
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||| || || ||| || |||||| | ||||||| |||||||||||||    
T  24722693 gtcactattataagcaaaaattaatattttagattcatttattaaatgatgtatgtggtctat 24722755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 853 - 915
Target Start/End: Original strand, 39682615 - 39682677
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||| ||||  | |||||| || |||||| ||||||||| |||||||||||||    
T  39682615 gtcactattataagtaaaaaattattttttaggttcattgaataaatgatgtatgtggtctat 39682677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 40639847 - 40639781
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||| || |  ||| |  |||||||| ||||||| |||||||||||||    
T  40639847 tccggtcactattataagcaaaaattaacattttaaattcattcattaaatgatgtatgtggtctat 40639781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 42787610 - 42787684
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||| |||||||||||||||||||| |  |||||  || | ||||||||||||||  ||||| ||||||    
T  42787610 atacaccatctggtcactattataagcaaaaatcaattttgtagatccattcaataaatgatatatgtagtctat 42787684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 839 - 913
Target Start/End: Original strand, 50260925 - 50260999
Alignment:
Q  839 gcatacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||| |||||| |||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  50260925 gcatacaccctccggttactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 50260999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 331944 - 331879
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||| ||||||||||||||||||||||| || |  ||| || |||||||| ||||||| ||||    
T  331944 atacaccctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 331879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 852 - 913
Target Start/End: Original strand, 7981150 - 7981211
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| | ||||||||||| ||||| ||| || |||||||||||||||| | |||||||||    
T  7981150 ggtcacaaatataagcaaaaattcatattttaggttcattcaataaatgatgcatgtggtct 7981211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 12745046 - 12744973
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| | ||||||||||||||||||||| || |  ||| || | |||||| ||||||| |||||||||||||    
T  12745046 tacacccttcggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctat 12744973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 909
Target Start/End: Complemental strand, 51239390 - 51239321
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||| ||||||||||| ||||||||||| |  |||||| || | |||||||| ||||| |||||||    
T  51239390 catacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 51239321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 52216025 - 52215952
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||||||||||||||| |  |  ||| || |||| ||| ||||||| |||||||||||||    
T  52216025 tacaccctccggtcactattataagcaaaaatcaacattttagattcactcattaaatgatgtatgtggtctat 52215952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 840 - 915
Target Start/End: Complemental strand, 7313977 - 7313902
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||| || |||||||||||||||||||||||||| | |||| || |||| ||||||||||| |||||||||||||    
T  7313977 catactccctccggtcactattataagcaaaagttgactttttaggttcaatcaataaatgatgtatgtggtctat 7313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 33075211 - 33075137
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||| |||||||||||||||||||| || || ||| || |||||||| ||||||| |||||||||||||    
T  33075211 atacaccatctggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctat 33075137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 851 - 915
Target Start/End: Original strand, 27895901 - 27895965
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||| ||||||||||||||| || |||||| ||||||||| |||||| ||||||    
T  27895901 cggtcactattataaacaaaagttcattttttagattcatttaataaatgatgtatgtagtctat 27895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 840 - 915
Target Start/End: Complemental strand, 1098774 - 1098699
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||| || |||||||||||||||||||||||||| |||||| || |||||| ||||||| | |||||| ||||||    
T  1098774 catactccctccggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctat 1098699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 25713836 - 25713770
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||| |||||||| |||||||| |||||| || ||||||||||||||||  ||||||||||||    
T  25713836 tccggtcattattataaacaaaagttgattttttagattcattcaataaatgatatatgtggtctat 25713770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 854 - 915
Target Start/End: Original strand, 1098635 - 1098696
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||| ||||||| | |||| || |||||||||||||||| |||||||||||||    
T  1098635 tcactattataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctat 1098696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 841 - 914
Target Start/End: Original strand, 25408537 - 25408610
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||| ||||||||| | ||||||||||| ||||| ||| || |||||||||||||||| |||||| |||||    
T  25408537 atacaccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtcta 25408610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 840 - 909
Target Start/End: Complemental strand, 43506241 - 43506172
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||| || |||||||||||||||||||| |||| |||| || |||||||| ||||||| |||||||    
T  43506241 catacaccctctggtcactattataagcaaaatttcactttttagattcattcattaaatgatgtatgtg 43506172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 849 - 909
Target Start/End: Original strand, 18261602 - 18261662
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||||||||||||||||||||||| |||  || |||||||||||||| | |||||||    
T  18261602 tccggtcactattataagcaaaagttcactttatagattcattcaataaataatgtatgtg 18261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 841 - 913
Target Start/End: Complemental strand, 25408689 - 25408617
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||||||||||  | ||||||||||| || || ||| || |||||||||||||||| |||||||||||    
T  25408689 atacaccatccggtcataaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgtggtct 25408617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 849 - 912
Target Start/End: Complemental strand, 25792984 - 25792921
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||||||||||||||||||| || | |||| || |||||||| ||||||| ||||||||||    
T  25792984 tccggtcactattataagcaaaaatttactttttaggttcattcattaaatgatgtatgtggtc 25792921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 20019894 - 20019820
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||||    
T  20019894 atacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacgtatgtagtctat 20019820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 850 - 915
Target Start/End: Complemental strand, 13654645 - 13654580
Alignment:
Q  850 ccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||| |||| |||| |  |||||||||||||||| |||| | ||||||    
T  13654645 ccggtcactattataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctat 13654580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 838 - 915
Target Start/End: Complemental strand, 23421057 - 23420980
Alignment:
Q  838 ggcatacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||| |||||| || || |||||||| | |||| |  |||||||||||||||| ||||| |||||||    
T  23421057 ggcatacaccatccgatcactaatagaaacaaaagtttactttttaagttcattcaataaatgatgtatgcggtctat 23420980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 849 - 914
Target Start/End: Original strand, 25358060 - 25358125
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||||||||||||||||| |||| || |||||| || |||||||||||||||| | ||||| ||||    
T  25358060 tccggtcactattataagtaaaaatttatttttaagattcattcaataaatgatgaatgtgatcta 25358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 913
Target Start/End: Original strand, 26300104 - 26300177
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||||| ||||||||||| || | |||| || | |||||||| ||||| |||||||||||    
T  26300104 catacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtct 26300177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 849 - 902
Target Start/End: Original strand, 40515229 - 40515282
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaa 902  Q
    |||||||||||||||||| ||||||| | |||| || |||||||||||||||||    
T  40515229 tccggtcactattataagtaaaagttgactttttagattcattcaataaatgaa 40515282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 846 - 915
Target Start/End: Original strand, 42247551 - 42247620
Alignment:
Q  846 ccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||||||  || | |||| |  |||||||||||||||| ||| |||||||||    
T  42247551 ccatccggtcactattataagcaaattttgactttttatgttcattcaataaatgatgtacgtggtctat 42247620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 851 - 915
Target Start/End: Original strand, 2673851 - 2673915
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||  || | |||| || | |||||||||||||| |||||||||||||    
T  2673851 cggtcactattataagcaaattttgactttttaggtacattcaataaatgatgtatgtggtctat 2673915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 909
Target Start/End: Complemental strand, 3851509 - 3851441
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| || | |||| ||| ||||| |||||||    
T  3851509 atacaccctccggtcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtg 3851441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 23914835 - 23914907
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||| ||||||||||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  23914835 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 23914907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 908
Target Start/End: Complemental strand, 40100225 - 40100165
Alignment:
Q  849 tccggtcactattataagcaaaagttca-tttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||||||||||||||||||| |||| ||||| || |||||||| ||||||| ||||||    
T  40100225 tccggtcactattataagcaaaaattcatttttttagattcattcagtaaatgatgtatgt 40100165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 913
Target Start/End: Original strand, 42013824 - 42013888
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||||||||||    
T  42013824 tccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtct 42013888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 852 - 912
Target Start/End: Original strand, 43506112 - 43506172
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    |||||||||||||||||||| |||| |||| || |||| ||| ||||||| ||||||||||    
T  43506112 ggtcactattataagcaaaatttcactttttagattcaatcattaaatgatgtatgtggtc 43506172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 849 - 912
Target Start/End: Original strand, 13654511 - 13654574
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    |||||||||||||||||| |||  || | |||| || |||||||||||||||| ||||||||||    
T  13654511 tccggtcactattataagtaaatattgactttttaggttcattcaataaatgatgtatgtggtc 13654574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 851 - 913
Target Start/End: Original strand, 11262332 - 11262394
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||||||||||    
T  11262332 cggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtct 11262394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 911
Target Start/End: Complemental strand, 13356283 - 13356213
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    ||||||| |||||||| |||||||||||||| |  | |||| |  |||||||||||||||| |||||||||    
T  13356283 atacaccctccggtcattattataagcaaaaatctactttttaagttcattcaataaatgatgtatgtggt 13356213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 903
Target Start/End: Original strand, 17225164 - 17225218
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaag 903  Q
    |||||||  ||||||||||||||||| | |||| || ||||||||||||||||||    
T  17225164 tccggtcgttattataagcaaaagttgactttttaggttcattcaataaatgaag 17225218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 911
Target Start/End: Original strand, 33684032 - 33684102
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||||||||||||| |||||||||||||| | ||||| ||| || |||||| ||||| ||  |||||||||    
T  33684032 atacaccatccggtaactattataagcaataattcatattttaggttcatttaataattgttgtatgtggt 33684102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 891
Target Start/End: Complemental strand, 40515319 - 40515277
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcatt 891  Q
    |||||||||||||||||||||||||||| |||| || ||||||    
T  40515319 tccggtcactattataagcaaaagttcactttttagattcatt 40515277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 1996842 - 1996915
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||| ||||||||||| ||   |||| || |||||||| ||||||| |||||| ||||||    
T  1996842 tacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgtagtctat 1996915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 854 - 915
Target Start/End: Original strand, 3100412 - 3100473
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||| || |  ||| || |||||||||||||||| |||||| ||||||    
T  3100412 tcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctat 3100473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 6763843 - 6763778
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||| ||||||||||| ||||||||||| | ||||||  || |||||||||| ||||| ||||    
T  6763843 atacaccctccggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgtat 6763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 902
Target Start/End: Original strand, 9707079 - 9707140
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaa 902  Q
    ||||||| ||| ||||||||||||||||||| || | |||  || |||||||||||||||||    
T  9707079 atacaccctccagtcactattataagcaaaaatttactttctaggttcattcaataaatgaa 9707140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 852 - 913
Target Start/End: Complemental strand, 17967450 - 17967389
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||||||||| ||||| || || ||| |  |||||||||||||||| |||||||||||    
T  17967450 ggtcactattataaacaaaaattgatattttatattcattcaataaatgatgtatgtggtct 17967389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 27314470 - 27314543
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||| ||||||||||| ||   |||| || |||||||| ||||||| |||||| ||||||    
T  27314470 tacaccctccggtcactaatataagcaaaaatttggtttttagattcattcattaaatgacgtatgtagtctat 27314543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 841 - 899
Target Start/End: Original strand, 18654244 - 18654302
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaat 899  Q
    ||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  18654244 atacaccttccggtcactattataagcaaaagttcattttttaggttctttcaataaat 18654302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 43813127 - 43813193
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||| || | |||| || ||||||||||||||||||||||| ||||||    
T  43813127 tccggtcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctat 43813193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 847 - 915
Target Start/End: Complemental strand, 8169236 - 8169168
Alignment:
Q  847 catccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||| ||||||||||||||||||| | |||| || |||||||||||||||| |||||| ||||||    
T  8169236 catccggttactattataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctat 8169168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 842 - 918
Target Start/End: Original strand, 10095714 - 10095790
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatgat 918  Q
    |||||| ||||||||||||||||||||||| || |  ||| || |||||||| ||||||| ||||||||||||||||    
T  10095714 tacaccctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctatgat 10095790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 851 - 915
Target Start/End: Complemental strand, 11602903 - 11602839
Alignment:
Q  851 cggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||| |||||||||| |||| || |||||||||||||||| |||||| ||||||    
T  11602903 cggtcactattataaacaaaagttcactttttagattcattcaataaatgatgtatgtagtctat 11602839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 849 - 908
Target Start/End: Original strand, 34840616 - 34840675
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||||| ||||||||||||||||||| |||| || |||||||||||||||| ||||||    
T  34840616 tccggtcattattataagcaaaagttcactttttagattcattcaataaatgatgtatgt 34840675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 36547724 - 36547658
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||| ||||||||  || |||||||| ||||||  |||||||||||||    
T  36547724 tccggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 36547658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 841 - 909
Target Start/End: Complemental strand, 31417663 - 31417595
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    ||||| ||||||||||| | ||||||||||| ||||| ||| || |||||||||||||||| |||||||    
T  31417663 atacatcatccggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgtg 31417595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 848 - 915
Target Start/End: Complemental strand, 34478374 - 34478307
Alignment:
Q  848 atccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||||| || |||||| || |||||| | ||||||| |||| ||||||||    
T  34478374 atccggtcactattataagcaaaaattaattttttagattcatttactaaatgatgtatttggtctat 34478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 16777886 - 16777960
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| |||||||||||||| | |||| || |||||| | ||||||| |||||| ||||||    
T  16777886 atacaccctccggtcactaatataagcaaaagtttaatttttagattcatttattaaatgatgtatgtagtctat 16777960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 18654540 - 18654614
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| |||||| ||||||| | |||| || ||| |||||||||| | |||||||||||||    
T  18654540 atacaccctccggtcactactataagaaaaagtttactttttaggttctttcaataaataatgtatgtggtctat 18654614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 853 - 915
Target Start/End: Complemental strand, 21099377 - 21099315
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||| ||||||||| |||| |  |||||||||||||||| |||||| ||||||    
T  21099377 gtcactattataagtaaaagttcactttttatattcattcaataaatgacgtatgtagtctat 21099315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 858 - 915
Target Start/End: Original strand, 8169108 - 8169165
Alignment:
Q  858 tattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||   |||| || |||||||||||||||| |||||||||||||    
T  8169108 tattataagcaaaagttggctttttaggttcattcaataaatgatgtatgtggtctat 8169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 841 - 914
Target Start/End: Complemental strand, 25245289 - 25245216
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||| ||||||||||||||||||||||| |  |  ||| || |||||||| ||||||| ||||||||||||    
T  25245289 atacaccctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcta 25245216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 913
Target Start/End: Complemental strand, 34703590 - 34703517
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||| ||||||    
T  34703590 catacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatggtct 34703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 909
Target Start/End: Original strand, 11602770 - 11602830
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||||||||||||| ||||||| |||||| || |||||||| ||||| | |||||||    
T  11602770 tccggtcactattataagtaaaagttgattttttaggttcattcattaaattatgtatgtg 11602830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 841 - 908
Target Start/End: Complemental strand, 10422954 - 10422887
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||| ||||||||||| ||||||||||| || | |||| || |||||||| ||||||| ||||||    
T  10422954 atacaccctccggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgt 10422887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 2360443 - 2360517
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||| ||||||||||| ||   |||| || |||||||| ||||||| |||||| ||||||    
T  2360443 atacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgtagtctat 2360517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 12274955 - 12274881
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| |||||| |||||||||||||||| |  | |||| || ||||||||||| || | |||||||||||||    
T  12274955 atacaccctccggtaactattataagcaaaaatgtactttttagattcattcaatatataatgtatgtggtctat 12274881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 847 - 881
Target Start/End: Complemental strand, 21857226 - 21857192
Alignment:
Q  847 catccggtcactattataagcaaaagttcattttt 881  Q
    ||||||||||||||||||||||||| |||||||||    
T  21857226 catccggtcactattataagcaaaaattcattttt 21857192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 30457868 - 30457802
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| ||||||||||||| ||||||||| |||| |  |||||||||||||||  |||||| ||||||    
T  30457868 tccgatcactattataagtaaaagttcactttttaaattcattcaataaatgttgtatgttgtctat 30457802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Complemental strand, 31319662 - 31319588
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| |||| ||||||||||||| |||| |  |||||| || ||||||||| |||||| |||||| ||||||    
T  31319662 atacaccctccgatcactattataaggaaaaatatattttttagattcattcaaaaaatgatgtatgtagtctat 31319588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 853 - 915
Target Start/End: Complemental strand, 32599796 - 32599734
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||||||| |||| | || |||||||| ||||||| || ||||||||||    
T  32599796 gtcactgttataagcaaaagttgatttgttaggttcattcattaaatgatgtttgtggtctat 32599734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 34840799 - 34840733
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| ||||||||||||||||||||| |  ||| || |||||||||||||| |  ||||||||||||    
T  34840799 tccgatcactattataagcaaaagttgacattttaggttcattcaataaataatctatgtggtctat 34840733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 8571377 - 8571450
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||| ||||||||||||||   |||| || |||||||| |||||||  ||||| ||||||    
T  8571377 tacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacatatgtagtctat 8571450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 849 - 918
Target Start/End: Complemental strand, 9555398 - 9555329
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatgat 918  Q
    |||||||| |||||||||||||| || |  ||| || |||||||| ||||||| ||||||||| ||||||    
T  9555398 tccggtcattattataagcaaaactttacattttagattcattcattaaatgatgtatgtggtttatgat 9555329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 853 - 910
Target Start/End: Complemental strand, 10599126 - 10599069
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtgg 910  Q
    |||||||||||||| |||| |  |||||| || |||||||||||||||| ||||||||    
T  10599126 gtcactattataagtaaaaatctattttttaggttcattcaataaatgatgtatgtgg 10599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 12274804 - 12274877
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| || |||||||||||||||||||| | ||  ||| |  |||||||||||||||| |||||||| ||||    
T  12274804 tacaccctctggtcactattataagcaaaaatccacattttatgttcattcaataaatgatgtatgtggcctat 12274877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 21103391 - 21103318
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| |||| ||||||||||||||||||   ||||||  || |||||||| ||||||  |||||||||||||    
T  21103391 tacaccctccgatcactattataagcaaaaaaccattttctaggttcattcattaaatgttgtatgtggtctat 21103318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 906
Target Start/End: Original strand, 26824900 - 26824965
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||| ||||||||||| ||||||||||| || | |||| || |||||||| ||||||| ||||    
T  26824900 atacaccctccggtcactagtataagcaaaaatttaatttttagattcattcattaaatgacgtat 26824965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 858 - 915
Target Start/End: Original strand, 28752090 - 28752147
Alignment:
Q  858 tattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||| | |||| | ||||||||| ||||||| |||| ||||||||    
T  28752090 tattataagcaaaagttaactttttaatttcattcattaaatgatgtatttggtctat 28752147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 38238777 - 38238850
Alignment:
Q  841 atacaccatccggtcactattataagc-aaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||| ||||||||||| ||||||| |||| |||| |||| || | |||||||| ||||| |||||||||||    
T  38238777 atacaccctccggtcactaatataagcaaaaatttcactttttagatacattcaattaatgatgtatgtggtct 38238850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 32316412 - 32316486
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||||||||||||||| ||||||||  || |||||||| ||||||  |||||||||||||    
T  32316412 atacaccctccggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 32316486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 26229590 - 26229517
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||||||||||||||| ||||||||| || |||||||| |||||   |||||||||||||    
T  26229590 tacaccctccggtcactattataagcaaaaattcattttttaggttcattcattaaatattgtatgtggtctat 26229517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 841 - 914
Target Start/End: Original strand, 3123897 - 3123970
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    ||||||||||||||||  | ||||| ||||||||||| ||| || |||||||||||||||| |||||| |||||    
T  3123897 atacaccatccggtcataaatataaacaaaagttcatattttagattcattcaataaatgatgtatgttgtcta 3123970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 15119771 - 15119845
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| | ||||||||||||||||||||| || |  ||| || |||||||| ||||||| |||||||||||||    
T  15119771 atacacccttcggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctat 15119845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 27964286 - 27964352
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||| |||||||||||| || | |||| || |||||||||||||| | |||||||||||||    
T  27964286 tccggtcacttttataagcaaaaattgactttttaggttcattcaataaattatgtatgtggtctat 27964352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 854 - 908
Target Start/End: Original strand, 41824268 - 41824322
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||||||||||||||| ||||||||| || |||||||||||||| | ||||||    
T  41824268 tcactattataagcaaaaattcattttttagattcattcaataaattatgtatgt 41824322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 41824398 - 41824332
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||| |||||| |||| || | |||| || |||||||||||||||| |||||||||||||    
T  41824398 tccggtcactactataagtaaaaattgactttttaggttcattcaataaatgatgtatgtggtctat 41824332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 1961454 - 1961381
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||| |||||||||||||||||||| |  |  ||| || |||||||| ||||||| |||||||||||||    
T  1961454 tacaccatcgggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctat 1961381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 842 - 895
Target Start/End: Original strand, 15446774 - 15446827
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaat 895  Q
    |||||| ||||||||||||||||||||||| ||||||||| |  ||||||||||    
T  15446774 tacaccctccggtcactattataagcaaaaattcattttttaaattcattcaat 15446827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 37195046 - 37195118
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||| ||||||||||| |||||||||||||| || ||| || |||| ||||| ||||| |||| ||||||    
T  37195046 atacaccctccggtcactaatataagcaaaagttaatattttagattcactcaattaatgatgtatatggtct 37195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 913
Target Start/End: Complemental strand, 44274679 - 44274615
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||||  ||||||||||| |||| |||| || |||||||||||||||| |||||| ||||    
T  44274679 tccggtcactgatataagcaaaaattcactttttagattcattcaataaatgatgtatgtagtct 44274615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 849 - 908
Target Start/End: Complemental strand, 3124041 - 3123982
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    ||||||||| | ||||||||||| ||||| ||| || |||||||||||||||| ||||||    
T  3124041 tccggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgt 3123982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 842 - 908
Target Start/End: Original strand, 10221967 - 10222033
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||| ||||||||| ||||||| ||||| ||||| ||| |  |||||||||||||||| ||||||    
T  10221967 tacaccctccggtcacaattataaacaaaaattcatgttttatattcattcaataaatgatgtatgt 10222033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 854 - 915
Target Start/End: Complemental strand, 18731404 - 18731342
Alignment:
Q  854 tcactattataagcaaaagttc-atttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||||||||  ||||| || |||||||||||||| | |||||| ||||||    
T  18731404 tcactattataagcaaaagttcttttttttagattcattcaataaataatgtatgtagtctat 18731342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 840 - 914
Target Start/End: Complemental strand, 26836302 - 26836228
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||||| |||||||| |||| ||||||||||| | ||| ||| || ||||||||||||||||  ||||| |||||    
T  26836302 catacatcatccggttactaatataagcaaaaatccatattttagattcattcaataaatgatttatgttgtcta 26836228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 36547479 - 36547413
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| |||||||||||| ||||| || || || ||| |||||||||||||||| ||||||| |||||    
T  36547479 tccgatcactattataaacaaaatttaatattgcaggttcattcaataaatgatgtatgtgatctat 36547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 44274544 - 44274610
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||||| |||||||| |  ||| || ||||||||||||||||  ||||| ||||||    
T  44274544 tccggtcactattataaacaaaagttgacattttagattcattcaataaatgatatatgtagtctat 44274610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 44587645 - 44587711
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||| ||||||||||||||    |||||| || |||||| ||||||||| |||||||||||||    
T  44587645 tccggtcattattataagcaaaatactattttttaggttcattgaataaatgatgtatgtggtctat 44587711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 15446923 - 15446850
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||| ||| |||||||||||||||| |||| ||||||||| || |||||| | ||||||| |||| | ||||||    
T  15446923 tacatcattcggtcactattataagtaaaaattcattttttaggttcatttattaaatgatgtatatagtctat 15446850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 874
Target Start/End: Complemental strand, 26234170 - 26234137
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagtt 874  Q
    ||||||| ||||||||||||||||||||||||||    
T  26234170 atacaccctccggtcactattataagcaaaagtt 26234137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 909
Target Start/End: Complemental strand, 38594491 - 38594422
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||| ||||||||||| ||||||||||| |  |||||| || | |||||||| ||||| |||||||    
T  38594491 catacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 38594422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 849 - 906
Target Start/End: Complemental strand, 43543056 - 43542999
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||| | ||||||||  ||||||||||||| || |||||||||||||||| ||||    
T  43543056 tccggtctccattataagagaaagttcattttttaggttcattcaataaatgatgtat 43542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 854 - 915
Target Start/End: Complemental strand, 44094933 - 44094872
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||||| ||||| |  |||||| ||||||||  |||||| ||||||    
T  44094933 tcactattataagcaaaagttcgttttttaaattcatttaataaatgttgtatgtagtctat 44094872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 842 - 915
Target Start/End: Complemental strand, 4518 - 4445
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||||||||||||||| ||||||||  || |||||||| ||||||  |||||||||||||    
T  4518 tacaccctccggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 840 - 913
Target Start/End: Original strand, 13276479 - 13276552
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||| | ||||||||||| ||||| ||| || |||||||||||||||| |||||||||||    
T  13276479 catacaccctccggtcacaaatataagcaaaaattcatgttttaggttcattcaataaatgatgtatgtggtct 13276552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 30422328 - 30422401
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||| |||||||||||||||||||| ||||||||  || |||||||| ||||||  |||||||||||||    
T  30422328 tacaccatctggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgtggtctat 30422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 840 - 915
Target Start/End: Original strand, 8449567 - 8449642
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||| |||||||||||||||||| || || |||  | || ||||||||||||| |||||||||||||    
T  8449567 catacaccatccgatcactattataagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctat 8449642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 840 - 915
Target Start/End: Original strand, 8458371 - 8458446
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||| |||||||||||||||||| || || |||  | || ||||||||||||| |||||||||||||    
T  8458371 catacaccatccgatcactattataagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctat 8458446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 842 - 913
Target Start/End: Complemental strand, 32254966 - 32254895
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| |||| ||||||||||||||||||||| || ||| || |||||||| ||||||| |||||||||||    
T  32254966 tacaccctccgatcactattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtct 32254895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 852 - 915
Target Start/End: Original strand, 14173395 - 14173458
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||| |  | |||| || ||||||||||||||||||||||| ||||||    
T  14173395 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctat 14173458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 852 - 915
Target Start/End: Original strand, 14177931 - 14177994
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||| |  | |||| || ||||||||||||||||||||||| ||||||    
T  14177931 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctat 14177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 911
Target Start/End: Complemental strand, 15718539 - 15718469
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    ||||||| || | |||||||||||||||||| |||| |||| |  |||||||||||||||| |||||||||    
T  15718539 atacaccctctgatcactattataagcaaaaattcacttttaaaattcattcaataaatgatgtatgtggt 15718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 18886302 - 18886376
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||| ||||||||||||||||||| || || ||| || |||||||| |||||||  ||||||||||||    
T  18886302 atacaccctccagtcactattataagcaaaaattaatattttagattcattcattaaatgatatatgtggtctat 18886376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 911
Target Start/End: Complemental strand, 31632245 - 31632183
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||||||||||||||||| ||||||| | |||| || |||||| ||||||||| |||||||||    
T  31632245 tccggtcactattataagtaaaagttgactttttaggttcatttaataaatgatgtatgtggt 31632183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 842 - 914
Target Start/End: Original strand, 15836534 - 15836606
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||||||||||||||  | ||||||||||| ||||| ||  || |||||||||||||||| |||||| |||||    
T  15836534 tacaccatccggtcataaatataagcaaaaattcatattgtagattcattcaataaatgatgtatgttgtcta 15836606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 849 - 911
Target Start/End: Complemental strand, 18491799 - 18491736
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaa-tgaagtatgtggt 911  Q
    |||||||||||||||||| ||||||| | |||| || ||||||||||||| ||| |||||||||    
T  18491799 tccggtcactattataagtaaaagttgactttttaggttcattcaataaattgatgtatgtggt 18491736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 841 - 912
Target Start/End: Complemental strand, 34379881 - 34379810
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||||| ||||||||||||||||||||| |  |  ||| || |||||||| ||||||| ||||||||||    
T  34379881 atacaccatacggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtc 34379810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 842 - 916
Target Start/End: Original strand, 4844284 - 4844358
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatg 916  Q
    |||||| | |||||| || |||||||||||  |||||||| || | |||||||| ||||| ||||||||||||||    
T  4844284 tacacccttcggtcagtaatataagcaaaaaatcattttttagatacattcaattaatgatgtatgtggtctatg 4844358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 840 - 914
Target Start/End: Complemental strand, 13277169 - 13277095
Alignment:
Q  840 catacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||||||| ||||||||| | ||||| ||||| || || ||| || |||||||||||||||| |||||| |||||    
T  13277169 catacaccctccggtcacaaatataaacaaaaatttatattttagattcattcaataaatgatgtatgttgtcta 13277095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 842 - 908
Target Start/End: Original strand, 13462928 - 13462994
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgt 908  Q
    |||||| |||||||||||||| |||||||||||   |||| || | |||||||||||||| ||||||    
T  13462928 tacaccctccggtcactattagaagcaaaagtttgctttttagatccattcaataaatgatgtatgt 13462994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 911
Target Start/End: Complemental strand, 13463078 - 13463008
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||| ||||| ||| |||||||||||||||| || | |||| || |||||||| ||||||| |||||||||    
T  13463078 atactccatctggtaactattataagcaaaaattgactttttaggttcattcattaaatgatgtatgtggt 13463008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 849 - 906
Target Start/End: Original strand, 3203673 - 3203730
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    ||||||||||||||||||||||| |  |||||| || |||||||||| ||||| ||||    
T  3203673 tccggtcactattataagcaaaaatcaattttttaggttcattcaatgaatgatgtat 3203730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 849 - 898
Target Start/End: Original strand, 24110222 - 24110271
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaa 898  Q
    |||||||||||||||||||||||||| |||||| || || ||||| ||||    
T  24110222 tccggtcactattataagcaaaagttgattttttaggttaattcattaaa 24110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 843 - 915
Target Start/End: Complemental strand, 24750 - 24678
Alignment:
Q  843 acaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||| ||||||||||||||||||||||| || || ||| || |||||||| ||||||| |||||||||||||    
T  24750 acaccctccggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctat 24678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 7410559 - 7410633
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||| ||||||||||||||||||| || |||| | || ||||||||||||||||  ||||||||||||    
T  7410559 atacaccctccagtcactattataagcaaaatttaatttattagattcattcaataaatgatatatgtggtctat 7410633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 849 - 909
Target Start/End: Complemental strand, 24820435 - 24820375
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    ||||||||||||||||||||||| |||  |||| || |||||||||||||||| |||||||    
T  24820435 tccggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtg 24820375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 852 - 911
Target Start/End: Original strand, 24820303 - 24820362
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    |||||||||||||||||||| |||| || | || |||||||||||||||| |||||||||    
T  24820303 ggtcactattataagcaaaaattcacttcttaggttcattcaataaatgatgtatgtggt 24820362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 24418883 - 24418949
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||| || |||||| | |||| |  |||||||||||||||| |||||||||||||    
T  24418883 tccggtcactattataggctaaagttgactttttaagttcattcaataaatgatgtatgtggtctat 24418949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 911
Target Start/End: Original strand, 28882666 - 28882728
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    ||||||||||||||| |||||||||  | |||| || |||||||||||||||| |||||||||    
T  28882666 tccggtcactattatgagcaaaagtctactttttagattcattcaataaatgatgtatgtggt 28882728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 839 - 913
Target Start/End: Complemental strand, 29424131 - 29424057
Alignment:
Q  839 gcatacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||| |||| ||||||||| | ||||||||||| ||||| ||| || |||||||||||||||| |||||| ||||    
T  29424131 gcatgcaccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtct 29424057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 40640272 - 40640346
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||||||||||||||| ||  | ||| || |||||||| ||||||| ||| |||||||||    
T  40640272 atacaccctccggtcactattataagcaaaactttgtattttagattcattcattaaatgatgtacgtggtctat 40640346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 856 - 909
Target Start/End: Original strand, 7428901 - 7428954
Alignment:
Q  856 actattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtg 909  Q
    |||||||||||||||| ||||| ||| || |||||||||||||||| |||||||    
T  7428901 actattataagcaaaaattcatattttaggttcattcaataaatgatgtatgtg 7428954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 854 - 911
Target Start/End: Original strand, 36307999 - 36308056
Alignment:
Q  854 tcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    ||||||||||||  ||||||| |||||| || |||||||||||||||| |||||||||    
T  36307999 tcactattataaataaaagttgattttttaggttcattcaataaatgatgtatgtggt 36308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 852 - 915
Target Start/End: Complemental strand, 6260744 - 6260680
Alignment:
Q  852 ggtcactattataagcaaaagttca-tttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||||||||||| |||| ||||| || ||||||||||||||||| ||| || |||||    
T  6260744 ggtcactattataagcaaaaattcatttttttagattcattcaataaatgaaatatatgatctat 6260680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 842 - 910
Target Start/End: Original strand, 7377549 - 7377617
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtgg 910  Q
    |||||||||||||||||  ||||||||||| |||| |||| || | |||||||| ||||| ||||||||    
T  7377549 tacaccatccggtcactggtataagcaaaaattcactttttagatacattcaattaatgatgtatgtgg 7377617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 842 - 906
Target Start/End: Complemental strand, 10117115 - 10117051
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtat 906  Q
    |||||||||||||||||||||||||||||| || |  ||| || |||||||||| ||||| ||||    
T  10117115 tacaccatccggtcactattataagcaaaaatttacattttagattcattcaattaatgatgtat 10117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 842 - 914
Target Start/End: Complemental strand, 10934748 - 10934676
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtcta 914  Q
    |||||| ||||||||||||||||||||||| |  |  ||| || |||||||| ||||||| ||||||||||||    
T  10934748 tacaccctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcta 10934676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 913
Target Start/End: Complemental strand, 40098906 - 40098834
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||| ||||||||||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  40098906 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 40098834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 913
Target Start/End: Complemental strand, 9056166 - 9056095
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| ||||||||||| ||||||||||| |||| |||| || | |||| ||| ||||| |||||||||||    
T  9056166 tacaccctccggtcactaatataagcaaaaattcactttttagatacatttaattaatgatgtatgtggtct 9056095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 913
Target Start/End: Original strand, 14381233 - 14381304
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||| ||||||||||| ||||||||||| | || |||| || | |||||||| ||||| |||||||||||    
T  14381233 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtct 14381304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 860 - 915
Target Start/End: Complemental strand, 24419007 - 24418952
Alignment:
Q  860 ttataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||||||||| |||| |||| || |||||||||||||||| |||||| ||||||    
T  24419007 ttataagcaaaaattcactttttagattcattcaataaatgatgtatgtcgtctat 24418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 853 - 916
Target Start/End: Original strand, 35781233 - 35781296
Alignment:
Q  853 gtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctatg 916  Q
    ||||||||||||| ||||| || |||||| || ||||||||||||||||  |||| ||||||||    
T  35781233 gtcactattataaacaaaattttattttttaggttcattcaataaatgatatatgaggtctatg 35781296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 913
Target Start/End: Complemental strand, 41387907 - 41387836
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    ||||||||||||||||||||||||||||||    || ||| || |||||||| ||||| | |||||||||||    
T  41387907 tacaccatccggtcactattataagcaaaaaactatattttagattcattcattaaataatgtatgtggtct 41387836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 18018240 - 18018314
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| || ||| ||| |||||||||||| ||||||||| || |||||||| ||||||   ||||||||||||    
T  18018240 atacaccctctggttactgttataagcaaaaattcattttttaggttcattcattaaatgttatatgtggtctat 18018314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 915
Target Start/End: Original strand, 24287779 - 24287853
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| ||||||||||||||||||||||| ||    ||| || |||||||| ||||||| |||| ||||||||    
T  24287779 atacaccctccggtcactattataagcaaaactttgcattttagattcattcattaaatgatgtatatggtctat 24287853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 915
Target Start/End: Original strand, 42749057 - 42749123
Alignment:
Q  849 tccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||| ||||||||||||||   |||| || |||||||| ||||||| |||||| ||||||    
T  42749057 tccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtctat 42749123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 839 - 915
Target Start/End: Complemental strand, 15037899 - 15037822
Alignment:
Q  839 gcatacaccatccggtcactattataagcaaaagttca-tttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||| | |||||||||||||||||| |||| || | ||||| || |||||||||||||||| || ||||| ||||    
T  15037899 gcatacatcctccggtcactattataagtaaaattttatttttttaggttcattcaataaatgatgtgtgtggcctat 15037822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 24053592 - 24053665
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| ||||||||||| |||||||||||  | || ||| || |||||||| | ||||| |||||||||||||    
T  24053592 tacaccctccggtcactaatataagcaaaaaattatattttaggttcattcatttaatgatgtatgtggtctat 24053665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 852 - 913
Target Start/End: Original strand, 26014574 - 26014635
Alignment:
Q  852 ggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtct 913  Q
    |||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||||||||||    
T  26014574 ggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtct 26014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 842 - 915
Target Start/End: Original strand, 33070160 - 33070233
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    |||||| |||||||||| |||||||||||| ||  | ||| || |||||||| ||||||| |||||| ||||||    
T  33070160 tacaccctccggtcactgttataagcaaaactttgtattttagattcattcattaaatgatgtatgtagtctat 33070233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 911
Target Start/End: Original strand, 120139 - 120209
Alignment:
Q  841 atacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggt 911  Q
    ||||||| ||||||||||| ||||||||||| |||| |||| || | |||||||| ||||| |||||||||    
T  120139 atacaccctccggtcactaatataagcaaaatttcactttttagatacattcaattaatgatgtatgtggt 120209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 856 - 915
Target Start/End: Complemental strand, 21252 - 21193
Alignment:
Q  856 actattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtctat 915  Q
    ||||||||||||||| ||||| |||| || |||||| |||||||||  ||||||||||||    
T  21252 actattataagcaaatgttcactttttagattcatttaataaatgatatatgtggtctat 21193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 842 - 912
Target Start/End: Complemental strand, 54533 - 54463
Alignment:
Q  842 tacaccatccggtcactattataagcaaaagttcatttttcagtttcattcaataaatgaagtatgtggtc 912  Q
    ||||||||||| |||||| ||||||||||| |||| | || || | |||||||| ||||| ||||||||||    
T  54533 tacaccatccgatcactaatataagcaaaaattcactctttagatacattcaattaatgatgtatgtggtc 54463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University