View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13157_high_12 (Length: 254)
Name: NF13157_high_12
Description: NF13157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13157_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26111174 - 26110933
Alignment:
| Q |
1 |
ttgcgagtgttttgatattcattatctgttctgtaggtgatggaaacattcctcttactttatcacttggatttttaacggtgagaacttgacatcacta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
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| T |
26111174 |
ttgcgagtgttttgatattcattatctgttctgtaggtgatggaaacattcctcttactttatcacttggatttttaacggttagaacctgacaccacta |
26111075 |
T |
|
| Q |
101 |
tcattagtttttatcaccagaaaggtgaactgtgtatcattgatcttaactgtcaaactatattttttcgcagtcattgacttgcggtcttgctatgctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26111074 |
tcattagtttttatcaccagaaaggtgaactgtgtatcattgatcttaactgtcaaactatattttttcgcagtcattgacttgcggtcttgctatgctt |
26110975 |
T |
|
| Q |
201 |
ggtcgtattacaaaggtaatatctgatttatttccctttgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
26110974 |
ggtcgtattacaaaggtaatatctgatttatttccctttgct |
26110933 |
T |
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