View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13157_high_9 (Length: 361)
Name: NF13157_high_9
Description: NF13157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13157_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 7 - 343
Target Start/End: Complemental strand, 4956772 - 4956436
Alignment:
| Q |
7 |
tagataattctccatcagacgatgattttgaggatattcatggttttggatttctaatggatttgcgtaatcgttttgaactttcaatcccttccacata |
106 |
Q |
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| T |
4956772 |
tagataattctccaacagacgatgattatgaggatattcatggttttggatttctaatggatttgcgtaatcgttttgaactttcaattccttccacata |
4956673 |
T |
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| Q |
107 |
ttttggaaattgtttatcattttgtcttgcaacactaccaaagaggaagttagtgggagaaaatggtatatgtgaagcagcaaatattattggaagagaa |
206 |
Q |
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| T |
4956672 |
ttttggaaattgtttatcattttgtcttgcaacactaccaaagaggaagttagtgggagaaaatggtatatgtgaagcagcaaatattattggaagagaa |
4956573 |
T |
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| Q |
207 |
ataagtttgaaagatcctttaaaagaagataaagagtttaacaagtctttgaatatgattcgtgtaatagggtcaccaaagtttgatgtgtatgaaactg |
306 |
Q |
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| T |
4956572 |
ataagtttgaaagatcctttaaaagaagataaagagtttaacaagtctttgaatatgattcgtgtaatagggtcaccaaagtttgatgtgtatgaaactg |
4956473 |
T |
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| Q |
307 |
actttggattggggaagcctattttaaccgatgttat |
343 |
Q |
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| T |
4956472 |
actttggattggggaagcctattttaaccgatgttat |
4956436 |
T |
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