View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1315_low_3 (Length: 537)

Name: NF1315_low_3
Description: NF1315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1315_low_3
NF1315_low_3
[»] chr2 (46 HSPs)
chr2 (57-327)||(2410333-2410605)
chr2 (334-478)||(2410059-2410203)
chr2 (383-478)||(11513859-11513954)
chr2 (385-474)||(9395093-9395182)
chr2 (384-474)||(33942112-33942202)
chr2 (442-483)||(40837444-40837485)
chr2 (374-461)||(10143124-10143211)
chr2 (383-469)||(15780040-15780124)
chr2 (383-474)||(22681203-22681294)
chr2 (386-448)||(5043604-5043666)
chr2 (384-474)||(13630299-13630389)
chr2 (385-467)||(25790089-25790171)
chr2 (385-474)||(27288596-27288683)
chr2 (383-461)||(28803537-28803615)
chr2 (384-457)||(3102655-3102728)
chr2 (393-474)||(3235402-3235482)
chr2 (385-478)||(18066091-18066184)
chr2 (374-474)||(18962055-18962156)
chr2 (374-478)||(1742046-1742150)
chr2 (374-478)||(5133724-5133828)
chr2 (398-474)||(10285836-10285912)
chr2 (398-474)||(40158694-40158770)
chr2 (394-474)||(43205281-43205361)
chr2 (387-474)||(29316793-29316880)
chr2 (378-433)||(37766754-37766809)
chr2 (411-478)||(39983331-39983398)
chr2 (422-477)||(43985018-43985073)
chr2 (383-433)||(14666509-14666559)
chr2 (386-432)||(31740019-31740065)
chr2 (384-474)||(32694174-32694264)
chr2 (374-439)||(43299455-43299521)
chr2 (383-433)||(43529910-43529960)
chr2 (384-474)||(44438857-44438947)
chr2 (405-466)||(757438-757499)
chr2 (385-438)||(4550740-4550793)
chr2 (374-439)||(17952754-17952819)
chr2 (380-425)||(29429824-29429869)
chr2 (387-473)||(29503100-29503188)
chr2 (386-474)||(35485881-35485969)
chr2 (425-474)||(43065468-43065517)
chr2 (385-466)||(43141834-43141915)
chr2 (416-469)||(44238057-44238110)
chr2 (374-474)||(6227703-6227803)
chr2 (383-427)||(33256701-33256745)
chr2 (385-477)||(36863640-36863732)
chr2 (398-454)||(37276722-37276778)
[»] chr4 (31 HSPs)
chr4 (372-473)||(53943557-53943657)
chr4 (383-448)||(927437-927502)
chr4 (387-474)||(7694028-7694115)
chr4 (374-474)||(24929445-24929545)
chr4 (374-474)||(49219091-49219191)
chr4 (374-474)||(54325055-54325155)
chr4 (372-439)||(55870394-55870461)
chr4 (393-474)||(18628561-18628642)
chr4 (393-474)||(51197500-51197580)
chr4 (383-474)||(30207589-30207679)
chr4 (396-474)||(21157742-21157820)
chr4 (393-474)||(20936247-20936328)
chr4 (409-474)||(35405934-35405999)
chr4 (404-477)||(36722684-36722757)
chr4 (387-439)||(13949897-13949949)
chr4 (375-478)||(6466060-6466163)
chr4 (385-471)||(8422860-8422944)
chr4 (383-474)||(11802495-11802586)
chr4 (374-432)||(4071834-4071892)
chr4 (374-459)||(27623587-27623675)
chr4 (385-467)||(30581702-30581784)
chr4 (384-474)||(35064817-35064907)
chr4 (383-469)||(52735083-52735169)
chr4 (393-474)||(29263341-29263422)
chr4 (385-474)||(33534187-33534276)
chr4 (374-439)||(49085941-49086006)
chr4 (374-474)||(10192236-10192335)
chr4 (385-433)||(25434519-25434567)
chr4 (401-469)||(42866047-42866115)
chr4 (374-474)||(45128328-45128428)
chr4 (374-474)||(51630063-51630163)
[»] chr6 (20 HSPs)
chr6 (374-474)||(2117355-2117455)
chr6 (393-478)||(8420211-8420296)
chr6 (385-474)||(32386581-32386670)
chr6 (406-474)||(1275133-1275201)
chr6 (379-471)||(1401067-1401158)
chr6 (374-474)||(2027424-2027524)
chr6 (374-474)||(33787763-33787863)
chr6 (383-474)||(281866-281957)
chr6 (383-474)||(3155137-3155227)
chr6 (374-476)||(4006666-4006768)
chr6 (374-470)||(24836224-24836317)
chr6 (384-478)||(25100005-25100099)
chr6 (435-474)||(1408285-1408324)
chr6 (374-473)||(5328926-5329024)
chr6 (374-433)||(6310283-6310342)
chr6 (379-474)||(28088240-28088335)
chr6 (384-474)||(1497943-1498033)
chr6 (384-474)||(20671884-20671973)
chr6 (383-468)||(3181093-3181177)
chr6 (374-439)||(10452413-10452478)
[»] chr3 (42 HSPs)
chr3 (383-474)||(27792833-27792924)
chr3 (374-474)||(24887301-24887401)
chr3 (411-479)||(14548734-14548802)
chr3 (374-474)||(20192624-20192724)
chr3 (387-474)||(23785220-23785307)
chr3 (385-474)||(45432957-45433046)
chr3 (387-474)||(36101533-36101620)
chr3 (383-478)||(44374659-44374753)
chr3 (414-469)||(51510216-51510271)
chr3 (385-479)||(1816546-1816640)
chr3 (385-474)||(20502086-20502176)
chr3 (393-474)||(21367638-21367719)
chr3 (374-467)||(22232778-22232871)
chr3 (387-472)||(23315591-23315676)
chr3 (388-433)||(28779322-28779367)
chr3 (383-476)||(33965504-33965600)
chr3 (394-471)||(48286831-48286908)
chr3 (422-474)||(237397-237449)
chr3 (386-473)||(1125785-1125873)
chr3 (387-474)||(2318609-2318697)
chr3 (387-474)||(36139843-36139930)
chr3 (414-474)||(43115048-43115108)
chr3 (398-458)||(43875624-43875684)
chr3 (411-471)||(47904084-47904144)
chr3 (387-474)||(27290919-27291006)
chr3 (415-474)||(44295522-44295581)
chr3 (374-473)||(54775080-54775178)
chr3 (388-474)||(25453877-25453963)
chr3 (383-433)||(40122812-40122861)
chr3 (374-424)||(49586984-49587034)
chr3 (380-469)||(8933745-8933834)
chr3 (383-476)||(13481256-13481349)
chr3 (386-474)||(2201092-2201180)
chr3 (385-433)||(12923384-12923432)
chr3 (398-474)||(16990179-16990255)
chr3 (393-433)||(19679387-19679427)
chr3 (383-474)||(21862193-21862285)
chr3 (374-438)||(22214735-22214799)
chr3 (393-473)||(26603164-26603244)
chr3 (383-431)||(31337462-31337510)
chr3 (374-474)||(36646400-36646500)
chr3 (383-439)||(37788821-37788877)
[»] chr1 (50 HSPs)
chr1 (379-474)||(45205025-45205120)
chr1 (384-474)||(37842373-37842463)
chr1 (385-474)||(30257646-30257735)
chr1 (374-474)||(30259504-30259605)
chr1 (394-478)||(15515513-15515597)
chr1 (395-474)||(8130409-8130488)
chr1 (383-474)||(34380406-34380497)
chr1 (383-478)||(44032013-44032108)
chr1 (399-473)||(4078168-4078242)
chr1 (383-445)||(33527194-33527256)
chr1 (374-476)||(42556647-42556749)
chr1 (393-474)||(7218092-7218173)
chr1 (374-431)||(15360846-15360903)
chr1 (402-474)||(12564892-12564964)
chr1 (386-474)||(25479545-25479633)
chr1 (378-474)||(30371104-30371200)
chr1 (383-474)||(31517758-31517849)
chr1 (383-474)||(39347985-39348076)
chr1 (384-474)||(44940305-44940393)
chr1 (383-469)||(27738203-27738289)
chr1 (372-473)||(6932980-6933081)
chr1 (374-474)||(3924576-3924676)
chr1 (387-476)||(35017539-35017630)
chr1 (374-474)||(39777615-39777715)
chr1 (384-468)||(46980153-46980237)
chr1 (422-474)||(49175619-49175671)
chr1 (374-433)||(5756745-5756804)
chr1 (374-433)||(6074426-6074485)
chr1 (415-474)||(7472304-7472363)
chr1 (380-439)||(10581130-10581189)
chr1 (395-474)||(33723400-33723479)
chr1 (415-474)||(35590910-35590969)
chr1 (383-478)||(52286639-52286734)
chr1 (384-474)||(4215334-4215424)
chr1 (393-474)||(6231834-6231916)
chr1 (393-467)||(17269221-17269295)
chr1 (393-439)||(25006087-25006133)
chr1 (385-474)||(3319950-3320039)
chr1 (393-474)||(5150908-5150989)
chr1 (380-433)||(5421979-5422032)
chr1 (415-476)||(7137014-7137075)
chr1 (374-439)||(7273992-7274057)
chr1 (385-474)||(12477305-12477394)
chr1 (393-474)||(27887136-27887217)
chr1 (384-445)||(37272633-37272694)
chr1 (374-439)||(49517022-49517087)
chr1 (374-474)||(4200181-4200281)
chr1 (442-474)||(5047166-5047198)
chr1 (374-474)||(12564517-12564616)
chr1 (383-439)||(28467360-28467416)
[»] chr7 (26 HSPs)
chr7 (383-474)||(44151498-44151589)
chr7 (384-478)||(39505919-39506012)
chr7 (374-439)||(1417216-1417281)
chr7 (385-474)||(31338471-31338560)
chr7 (376-433)||(45777230-45777287)
chr7 (383-439)||(9527143-9527199)
chr7 (383-466)||(17989049-17989132)
chr7 (387-466)||(29363483-29363562)
chr7 (383-466)||(30456476-30456559)
chr7 (383-474)||(38010675-38010766)
chr7 (372-474)||(21185039-21185140)
chr7 (384-474)||(44910566-44910656)
chr7 (393-438)||(18516303-18516348)
chr7 (384-433)||(45813239-45813288)
chr7 (383-439)||(5006562-5006618)
chr7 (398-466)||(27481320-27481388)
chr7 (398-466)||(36370645-36370713)
chr7 (374-465)||(1373567-1373658)
chr7 (383-474)||(3610758-3610849)
chr7 (383-474)||(28165052-28165143)
chr7 (396-474)||(24909638-24909716)
chr7 (396-474)||(34754828-34754905)
chr7 (397-474)||(3559010-3559087)
chr7 (397-465)||(1350269-1350337)
chr7 (422-474)||(24363619-24363671)
chr7 (415-475)||(44241852-44241912)
[»] chr5 (34 HSPs)
chr5 (374-477)||(42181107-42181210)
chr5 (385-474)||(37588378-37588467)
chr5 (374-474)||(14295458-14295558)
chr5 (411-466)||(29054897-29054952)
chr5 (384-474)||(36539708-36539798)
chr5 (385-474)||(37690654-37690744)
chr5 (393-474)||(17368647-17368728)
chr5 (385-474)||(37526217-37526306)
chr5 (383-475)||(32172614-32172706)
chr5 (393-473)||(41016150-41016230)
chr5 (367-474)||(28586784-28586891)
chr5 (384-474)||(26390808-26390897)
chr5 (397-474)||(9106796-9106873)
chr5 (385-474)||(10272449-10272538)
chr5 (393-474)||(17258901-17258982)
chr5 (374-474)||(18543215-18543315)
chr5 (374-439)||(39823174-39823239)
chr5 (374-474)||(18704054-18704153)
chr5 (387-474)||(19177444-19177532)
chr5 (387-439)||(32059642-32059694)
chr5 (403-474)||(11104899-11104970)
chr5 (383-466)||(15003540-15003623)
chr5 (374-429)||(35135725-35135780)
chr5 (387-429)||(583836-583878)
chr5 (395-474)||(19138735-19138816)
chr5 (393-475)||(31030147-31030229)
chr5 (415-476)||(2568651-2568712)
chr5 (421-474)||(15074767-15074820)
chr5 (393-473)||(41017698-41017776)
chr5 (386-439)||(41277403-41277456)
chr5 (386-478)||(3970694-3970786)
chr5 (394-474)||(8985633-8985713)
chr5 (442-478)||(31688059-31688095)
chr5 (374-474)||(42583101-42583201)
[»] chr8 (29 HSPs)
chr8 (383-477)||(30013179-30013273)
chr8 (393-474)||(26284813-26284894)
chr8 (379-474)||(11795049-11795144)
chr8 (387-477)||(6509318-6509408)
chr8 (373-474)||(41336663-41336764)
chr8 (399-474)||(7645955-7646030)
chr8 (383-474)||(31862454-31862545)
chr8 (421-474)||(7918791-7918844)
chr8 (393-470)||(10383856-10383933)
chr8 (393-474)||(29973052-29973133)
chr8 (375-468)||(34551073-34551166)
chr8 (394-471)||(37776725-37776802)
chr8 (393-474)||(39561559-39561640)
chr8 (386-474)||(12361156-12361244)
chr8 (383-439)||(34770853-34770909)
chr8 (397-474)||(43704394-43704473)
chr8 (398-465)||(10460579-10460646)
chr8 (383-474)||(11183506-11183597)
chr8 (383-477)||(35298492-35298587)
chr8 (383-474)||(41620309-41620400)
chr8 (388-474)||(42215324-42215410)
chr8 (393-474)||(6864477-6864558)
chr8 (421-478)||(27028830-27028887)
chr8 (393-474)||(28769357-28769438)
chr8 (374-439)||(38561678-38561743)
chr8 (450-478)||(7646234-7646262)
chr8 (422-474)||(9956832-9956884)
chr8 (374-426)||(34788493-34788545)
chr8 (442-474)||(39881770-39881802)
[»] scaffold0024 (1 HSPs)
scaffold0024 (374-474)||(27528-27628)
[»] scaffold0053 (1 HSPs)
scaffold0053 (386-453)||(20143-20210)
[»] scaffold0020 (1 HSPs)
scaffold0020 (384-474)||(159991-160080)


Alignment Details
Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 57 - 327
Target Start/End: Complemental strand, 2410605 - 2410333
Alignment:
Q  57 aattctcaggatgtgaccaaaagcatgaagaagagtttgattctgaagcaatttacaagaattttgttcttcaggtatgttctagacttagagtt---tt 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| | || ||   ||    
T  2410605 aattctcaggatgtgaccaaaagcatgaagaagagtttgattctgaagcaatttacaagaattttgttcttcgggtatcttctagacct-gacttgcttt 2410507  T
Q  154 attgattttggtttttgtcataaaaaggattaattaataatgagtgatgtgtaacgagaatttctcaaatttgtgttggattttcaggttatgaaagcta 253  Q
    ||||||||||||||| ||||||| ||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  |||||    
T  2410506 attgattttggttttggtcataagaacaattaattagtaatgagtaatgtgtaacgagtatttctcaaatttgtgttggattttcaggttatggcagcta 2410407  T
Q  254 gaagccccaatgttcggcttagaaaagcattgaattgaagggaaatagaagcgaggtaaccaactattaacact 327  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||| |||||||||||||||    
T  2410406 gaagccccaatgttcggcttagaaaagcattgaatcgaagagaaagagaagcgaggtagccaactattaacact 2410333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 334 - 478
Target Start/End: Complemental strand, 2410203 - 2410059
Alignment:
Q  334 tcatataagtgcttaagtataagtctataagccatacaccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  2410203 tcatataagtgcttaagcataagtctataagccatacgccatttatatgacaaaagatgaaacaaagtcaaattgtcttcatataatctataagttgttt 2410104  T
Q  434 gcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  2410103 gcatattttatcctgtagagcttatggaaataagctgaaaatagc 2410059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 383 - 478
Target Start/End: Original strand, 11513859 - 11513954
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||||||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||  ||||||| ||| ||| |||||||||||||||||||||    
T  11513859 acaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagc 11513954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 9395093 - 9395182
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||||  ||| ||| ||||||||||||||||| ||||| ||| | ||||  ||||||||||||| ||||||||||||||    
T  9395093 aaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaa 9395182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 33942112 - 33942202
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||||||||||||| ||||| ||| ||||||||||||| |||||   |||||  |||||| ||| |||| |||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaa 33942202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 483
Target Start/End: Complemental strand, 40837485 - 40837444
Alignment:
Q  442 tatcatgtagagcttatggaaataagctgaaaatagccatgg 483  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  40837485 tatcatgtagagcttatggaaataagctgaaaatagctatgg 40837444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 461
Target Start/End: Original strand, 10143124 - 10143211
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatgga 461  Q
    |||| ||| ||||||||| |||| |||||||||||| || |||||| ||||||||| ||| |||||  ||||||| |||| |||||||    
T  10143124 atttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatgga 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 469
Target Start/End: Original strand, 15780040 - 15780124
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    ||||||||| |||||||   |||| || ||||||||||||||||||||||| |||||  |||| || ||||||||| ||||||||||    
T  15780040 acaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 15780124  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 22681294 - 22681203
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||| |||| |||| ||| ||||||||| ||||||| ||||| |||||| |||| |  ||| |||||||||||||||| ||||    
T  22681294 acaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaa 22681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 5043666 - 5043604
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatg 448  Q
    |||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||||  |||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatg 5043604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 13630389 - 13630299
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| | ||||||||||||||| ||||||||||| ||||||||||| | |||| |||| |  |||| |||||  |||||| ||||||    
T  13630389 caaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgagagtttatgacaataagttgaaaa 13630299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 467
Target Start/End: Original strand, 25790089 - 25790171
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 467  Q
    ||||||| || | |||||||||||| ||||||||| ||| || ||||||| ||||| |||| || |||||||||| |||||||    
T  25790089 aaaagataaagtgaagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaataag 25790171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 27288596 - 27288683
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||| ||||||||| |  |||||| |||| |  ||||| ||||| ||||||||||||| ||| ||||||||||||||||    
T  27288596 aaaagataaaataaaatcaaactgttt--atataagctatgatctgttttcataagttatcatgtagagtttacggaaataagctgaaaa 27288683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 461
Target Start/End: Complemental strand, 28803615 - 28803537
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatgga 461  Q
    ||||||||| ||||||||||||||||  ||||||||| ||| ||||||||| | |||  |||| || ||||||||||||    
T  28803615 acaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagcttatgga 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 3102655 - 3102728
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagctta 457  Q
    ||||| || ||||||||||||||| | || ||||||||||| || ||||| |||||||||||||| ||| ||||    
T  3102655 caaaatataaaataaagtcaaactatttttatataatctattagctgttttcataatttatcatggagaactta 3102728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 3235482 - 3235402
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| ||||   |||| || | || ||||||||||||||||||||    
T  3235482 aaataaagtcaaactgt-ttcatataaactataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaa 3235402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 478
Target Start/End: Original strand, 18066091 - 18066184
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    |||| |||||||||||| ||| ||| ||||||||| ||||||| ||||| |||||  |||| || ||| |||| | ||||||| ||||||||||    
T  18066091 aaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagc 18066184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 18962156 - 18962055
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaat-aagctgaa 472  Q
    |||| ||| ||||||||| ||||||||| ||||||| ||||||||| ||||||  | ||| |||||  ||||||| ||||  ||||||||| ||||||||    
T  18962156 atttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagagactatggaaataaagctgaa 18962057  T
Q  473 aa 474  Q
    ||    
T  18962056 aa 18962055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 478
Target Start/End: Complemental strand, 1742150 - 1742046
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| |||||| || |||| |||||||||| | |  ||||||  |||||| ||||| |||||| ||||||| |||| ||||||||||||| ||||     
T  1742150 atttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaag 1742051  T
Q  474 atagc 478  Q
    |||||    
T  1742050 atagc 1742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 478
Target Start/End: Original strand, 5133724 - 5133828
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||  ||||||| || ||||||  |||||| ||||| || || |||||    ||||||||||||||||||||||||    
T  5133724 atttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaa 5133823  T
Q  474 atagc 478  Q
     ||||    
T  5133824 gtagc 5133828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 474
Target Start/End: Original strand, 10285836 - 10285912
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||  ||||||||| |||||||| ||||||||||  || |||  ||| |||||||||||||| ||||||    
T  10285836 aagtcaaactggtttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaa 10285912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 474
Target Start/End: Original strand, 40158694 - 40158770
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||| ||| ||||| | ||||||||||| ||||| ||||  || |||||||||| || |||||||||||    
T  40158694 aagtcaaactgttttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaa 40158770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 474
Target Start/End: Original strand, 43205281 - 43205361
Alignment:
Q  394 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||||||| |||||||||  |||||  ||||| |||||  ||||| | |||||||||||||||||| ||||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataagttgaaaa 43205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 474
Target Start/End: Complemental strand, 29316880 - 29316793
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| |||||| || ||| ||| |||| |||||||||||| ||||| ||| |  |||| || ||| |||||||||||||||||||||    
T  29316880 aagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 37766754 - 37766809
Alignment:
Q  378 atatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||||||| || ||||||||||||| ||| ||| ||||| |||||||||||||    
T  37766754 atatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttgttt 37766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 478
Target Start/End: Original strand, 39983331 - 39983398
Alignment:
Q  411 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||||||| ||||||||||||| |||||  |||| || |||||| ||| |||||| |||||||||||    
T  39983331 ttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagc 39983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 477
Target Start/End: Complemental strand, 43985073 - 43985018
Alignment:
Q  422 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 477  Q
    |||||||||||| |||||  |||| || |||||||||| |||||||||||||||||    
T  43985073 tataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatag 43985018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 14666509 - 14666559
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||||| ||||||||||||||||  |||||||||  ||||||||||||    
T  14666509 acaaaagataaaataaagtcaaactgatttcatataagttataagttgttt 14666559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 432
Target Start/End: Complemental strand, 31740065 - 31740019
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtt 432  Q
    |||||| ||||||||||||||| | ||||||||| ||||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 32694174 - 32694264
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||| ||| ||| | || ||||||| ||||||||||||||||||  |||| |  | || || |||||||||||||||||    
T  32694174 caaaagataaaataaaatcagactatttttatataatttataagttgtttgcataagctatcctagatagattgtggaaataagctgaaaa 32694264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 43299521 - 43299455
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatat-aatctataagttgtttgcataa 439  Q
    |||||||| ||| ||||| ||||||||||||||||| ||  ||| |||||||||||||||| |||||    
T  43299521 atttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataa 43299455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 43529960 - 43529910
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||||||||    
T  43529960 acaaaagataaaataaaatcaaactgctttcctataatctataagttgttt 43529910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 44438947 - 44438857
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||||||||||||| ||  || || | ||||| ||| | ||||| ||||| || ||| ||| |||||||||||||||||    
T  44438947 caaaagataaaataaagtcaaactgtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaa 44438857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 757438 - 757499
Alignment:
Q  405 actgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    |||||||| |||||| ||||||| ||||| || || ||||| || |||||||||||||||||    
T  757438 actgtgtttatataagctataagatgttttcaaaaattatcctggagagcttatggaaataa 757499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 438
Target Start/End: Original strand, 4550740 - 4550793
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcata 438  Q
    ||||||| |||||| ||||| |||| ||||||||| ||||||||||||| ||||    
T  4550740 aaaagataaaataacgtcaagctgttttcatataaactataagttgttttcata 4550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 17952819 - 17952754
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||| ||| ||||||||| ||||||||||||||| | ||||||||| ||| ||| ||||| |||||    
T  17952819 atttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataa 17952754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Complemental strand, 29429869 - 29429824
Alignment:
Q  380 atgacaaaagatgaaataaagtcaaactgtgttcatataatctata 425  Q
    |||||||||||| ||||||||||||||||| |||| |||| |||||    
T  29429869 atgacaaaagataaaataaagtcaaactgttttcacataagctata 29429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 473
Target Start/End: Complemental strand, 29503188 - 29503100
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa--tttatcatgtagagcttatggaaataagctgaaa 473  Q
    ||||| ||||||||||||||| | |||| | ||  |||||| ||||| |||||  | |||| || ||||||||||||||||||||||||    
T  29503188 aagataaaataaagtcaaactattttcaaagaagttataagatgtttccataaactatatcttggagagcttatggaaataagctgaaa 29503100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 35485881 - 35485969
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcat-ataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| ||||||||||||||| | ||||| |||| |||||||||||||  ||||  |||| || ||||| ||||||||| |||||||||    
T  35485881 aaagataaaataaagtcaaactat-ttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaa 35485969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 474
Target Start/End: Complemental strand, 43065517 - 43065468
Alignment:
Q  425 aagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||||||||    
T  43065517 aagttgttttcataagttatcgtggagagcttattgaaataagctgaaaa 43065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 43141834 - 43141915
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    ||||||| || |||||||||| ||| | ||||||| ||||||| ||||| |||||  |||| || |||| ||||||||||||    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataa 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 44238110 - 44238057
Alignment:
Q  416 ataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    |||| ||||||||||||| || || |||||||| |||| |||||||||||||||    
T  44238110 ataagctataagttgttttcagaagttatcatggagagtttatggaaataagct 44238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 6227703 - 6227803
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||||||| ||||||||| |||| || | |||| || || |||||| |||||||| |||| |||||  |||  || ||||||||||| || |||||||||    
T  6227703 atttatataacaaaagataaaattaaattaaaccgtttttatataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaa 6227802  T
Q  474 a 474  Q
    |    
T  6227803 a 6227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 33256701 - 33256745
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataag 427  Q
    |||| |||| ||||||||||||||||| ||||||||| |||||||    
T  33256701 acaatagataaaataaagtcaaactgttttcatataaactataag 33256745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 477
Target Start/End: Complemental strand, 36863732 - 36863640
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 477  Q
    ||||||| ||||||||||||||  | || ||||||  ||||| |||||| |||||  |||| || |||||||||| ||||||| || ||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaataagttggaaatag 36863640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagc 454  Q
    |||||||||||| |||||||||  |||||||||||| ||||| ||||| || |||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 9e-22; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 372 - 473
Target Start/End: Original strand, 53943557 - 53943657
Alignment:
Q  372 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    |||||| ||| ||||| ||||||||||| |||| |||| ||||||||| ||||||||||||| ||||| || ||||| ||||||||||||||||||||||    
T  53943557 ccatttttataacaaaggatgaaataaaatcaa-ctgttttcatataaactataagttgtttacataagttgtcatggagagcttatggaaataagctga 53943655  T
Q  472 aa 473  Q
    ||    
T  53943656 aa 53943657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 927437 - 927502
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatg 448  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||  |||||||    
T  927437 acaaaagatgaaataaagtcaaactgttttcatataagctataacttgtttgcataagctatcatg 927502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 474
Target Start/End: Complemental strand, 7694115 - 7694028
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||| |||||||||||| ||  ||||| ||||||| ||||| ||||| ||||| || |||| ||||||||||||||||||||    
T  7694115 aagatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaa 7694028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 24929445 - 24929545
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| |||||||||| |||||| |||||| || ||||||||||||| |||||  | |  |  ||||||||||||||||||||||||    
T  24929445 atttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaa 24929544  T
Q  474 a 474  Q
    |    
T  24929545 a 24929545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 49219091 - 49219191
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| |||||| || ||||||||||||| | | ||||||||| ||||||||||||| |||||  |||| |  |||| |||||||||||||||||||    
T  49219091 atttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaa 49219190  T
Q  474 a 474  Q
    |    
T  49219191 a 49219191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 54325155 - 54325055
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| ||||||| | ||| || ||  ||||||| |||| ||||||| |||| ||||||    
T  54325155 atttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaa 54325056  T
Q  474 a 474  Q
    |    
T  54325055 a 54325055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 55870461 - 55870394
Alignment:
Q  372 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||| ||| ||||||||| ||||||||||||||||| |||| |||| ||||||||||||| |||||    
T  55870461 ccatttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataa 55870394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 18628642 - 18628561
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||||||| || ||||||  |||||  ||||| ||||| ||||| || |||||||||||||||||||||||||    
T  18628642 aaatatagtcaaactgtttttatataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaa 18628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 51197580 - 51197500
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||| | ||||||||| |||||  |||||| |||||||||||||  |||||||||||||||||||| ||||    
T  51197580 aaataaattcaaactatattcatataagctatacattgttttcataatttatcat-cagagcttatggaaataagctaaaaa 51197500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 30207679 - 30207589
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| || ||||||| ||||||||| ||||||||| ||||||||||||| |||||  || | |  |||| ||||||||||||||||||||    
T  30207679 acaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaa 30207589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 21157742 - 21157820
Alignment:
Q  396 taaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||||| ||||| ||| ||||||| ||||| ||||   |||| || |||||||||||||||||||| ||||    
T  21157742 taaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaaaaa 21157820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 20936328 - 20936247
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| |||||||| ||| || |||||||||||| ||||||| |||| | |||| || |||| ||||||||||||| ||||||    
T  20936328 aaatgaagtcaaattgtttttatataatctataggttgttttcatattctatcctggagagattatggaaataaggtgaaaa 20936247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 474
Target Start/End: Original strand, 35405934 - 35405999
Alignment:
Q  409 tgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||| ||||| ||||||| || || ||||| || ||||||||||||| |||||||||||    
T  35405934 tgttcatataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaa 35405999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 36722757 - 36722684
Alignment:
Q  404 aactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 477  Q
    |||||| |||||||||  ||||||||||||  |||| ||||| || |||||||||| ||||||||| |||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaataagcttaaaatag 36722684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 13949949 - 13949897
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||| ||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgtttgtataa 13949897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 6466163 - 6466060
Alignment:
Q  375 tttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||| ||||| ||||||||| ||| | | ||  ||||||||||||||||||| |||||  |||  |  |||| ||||||||||||| ||||||    
T  6466163 tttatataacacaagatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaa 6466064  T
Q  475 tagc 478  Q
    ||||    
T  6466063 tagc 6466060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 8422944 - 8422860
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    ||||||| |||||||||||   ||| ||||||||| ||||||||||||| || ||| |||| || |||| ||||| |||||||||||    
T  8422944 aaaagataaaataaagtcat--tgttttcatataagctataagttgttttcacaatctatcttggagagtttatgcaaataagctga 8422860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 11802495 - 11802586
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||||||||||||| | |  ||| |||| ||| ||||||||| |||||  ||| ||| ||||||||||  |||||||||||||    
T  11802495 acaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaa 11802586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 4071834 - 4071892
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtt 432  Q
    |||| ||| ||||||||| ||||||||||||| | | ||||||||| ||||||||||||    
T  4071834 atttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 27623587 - 27623675
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctat---aagttgtttgcataatttatcatgtagagcttatg 459  Q
    |||| ||| ||||||||| ||||||||||||||| | || |||||| ||||   ||||||||| ||||| ||||| || ||||||||||    
T  27623587 atttgtataacaaaagataaaataaagtcaaactattttaatataagctataagaagttgttttcataagttatcctggagagcttatg 27623675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 467
Target Start/End: Complemental strand, 30581784 - 30581702
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 467  Q
    ||||||| |||| |||||||||| | ||| ||||| ||||||| |||||  |||| ||||| || |||| |||||||||||||    
T  30581784 aaaagataaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttggagagtttatggaaataag 30581702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 35064817 - 35064907
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||||  ||||||| ||  ||||  ||||| | ||||| |||||  ||||||| |||| ||||||||||||||||||||    
T  35064817 caaaagataaaataaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaa 35064907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 469
Target Start/End: Original strand, 52735083 - 52735169
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    ||||||||| ||||||||||||| |   |||||||||  |||| ||||||| | |||  |||| || ||||||||||||||||||||    
T  52735083 acaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagct 52735169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 29263341 - 29263422
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| | | ||| |||| |||| | ||||||||||| |||||  |||| || ||||||| |||||||||||||||||    
T  29263341 aaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaa 29263422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 33534276 - 33534187
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||| |||||| || |  |||||||||| ||||||||| | ||| ||||  |  |||||||||| ||||||||||||||    
T  33534276 aaaagataaaataaaatcaaaccgtttctatataatctacaagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaa 33534187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 49085941 - 49086006
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||||| ||||||||| |||||| |||||||| | |||||| ||  |||||||||||| |||||    
T  49085941 atttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataa 49086006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 10192236 - 10192335
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| |||||||||  |||||||||||| ||| |||||||||  |||||||||||| || ||  |||| || ||||| |||| ||||||| |||||    
T  10192236 atttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataagttgaaa 10192334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 25434567 - 25434519
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||| ||||||||||||  ||| ||||||||| |||||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttgttt 25434519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 469
Target Start/End: Original strand, 42866047 - 42866115
Alignment:
Q  401 tcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    ||||||||| || |||||| ||||||||||||| |||||  |||| |  ||||||||||||| ||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatggaagtaagct 42866115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 45128428 - 45128328
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| |||| || ||||| | |  |||||||| |||||| |||||| |||||  | || | || ||||||||||||||||||||||    
T  45128428 atttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataaactgtcctataaagcttatggaaataagctgaaa 45128329  T
Q  474 a 474  Q
    |    
T  45128328 a 45128328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 51630063 - 51630163
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    ||||||||  |||||||| ||||||||| ||| ||| || |||||| ||||||| | ||| |||||  |||| || |||  ||||| |||||||||||||    
T  51630063 atttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaa 51630162  T
Q  474 a 474  Q
    |    
T  51630163 a 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 2117355 - 2117455
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||||||||| ||| ||| ||||||||||| | ||||||||||||||||||||||| ||||| ||||| |  ||||||||| |||||||||| |||    
T  2117355 atttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaa 2117454  T
Q  474 a 474  Q
    |    
T  2117455 a 2117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 8420296 - 8420211
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    |||||||||||||||||||| ||||||  |||||| ||||  | |||  ||| ||| |||||||||||||||||| ||||||||||    
T  8420296 aaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggagagcttatggaaataagttgaaaatagc 8420211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 32386670 - 32386581
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||||| |||||| ||| |||||||||  |||| ||||||| ||| | ||||| || |||||||||| ||||||||||||||    
T  32386670 aaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaa 32386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 474
Target Start/End: Original strand, 1275133 - 1275201
Alignment:
Q  406 ctgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| ||||||||| ||||||| ||||| ||||  ||||| || |||||||||||||||||||||||||    
T  1275133 ctgttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaataagctgaaaa 1275201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 471
Target Start/End: Original strand, 1401067 - 1401158
Alignment:
Q  379 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    ||||||||||||| ||||||| ||||||||  ||  ||||| ||||||| ||||| |||||  ||||||| |||||||||||| |||||||||    
T  1401067 tatgacaaaagat-aaataaaatcaaactgctttagtataagctataagctgttttcataagctatcatggagagcttatggagataagctga 1401158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 2027524 - 2027424
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||||||||| | ||||||||| ||||||| ||||  |||||  || ||||||||| |||   |||||||||||||    
T  2027524 atttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaa 2027425  T
Q  474 a 474  Q
    |    
T  2027424 a 2027424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 33787863 - 33787763
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| |||||| || ||| ||||||||| ||  |||||||||  |||||| ||||| ||||| ||||| || |||||||||||||||| |||||||    
T  33787863 atttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaataggctgaaa 33787764  T
Q  474 a 474  Q
    |    
T  33787763 a 33787763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 281957 - 281866
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||||||||||||  ||| ||||||||| ||||||| ||| | |||||  |||| |  |||||| ||||||||||||||||||    
T  281957 acaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaa 281866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 3155137 - 3155227
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||| ||||||||||||| | ||||||| ||||||| | ||| |||||  |||| || ||||| |||||||||||||||||||    
T  3155137 acaaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagc-tatggaaataagctgaaaa 3155227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 476
Target Start/End: Original strand, 4006666 - 4006768
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||| ||| ||||||||||||| ||| || |||||| ||||||||||||| |||||  ||||    |||| ||||| |||||||||||||    
T  4006666 atttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaa 4006765  T
Q  474 ata 476  Q
    |||    
T  4006766 ata 4006768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 24836317 - 24836224
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctg 470  Q
    |||| ||| ||||||||| ||||||||||||| ||| ||| ||||| ||||||||| |   | |||  ||||||| |||||||||||||||||||||    
T  24836317 atttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtttt---cgtaagctatcatggagagcttatggaaataagctg 24836224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 478
Target Start/End: Original strand, 25100005 - 25100099
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||| |||||||| ||||||| ||| |||||| ||  |||||||||||| |||||  |||| |  ||||||||| |||||||| ||||||||||    
T  25100005 caaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaatagc 25100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 474
Target Start/End: Complemental strand, 1408324 - 1408285
Alignment:
Q  435 cataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  1408324 cataagttatcatatagagcttatggaaataagctgaaaa 1408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 473
Target Start/End: Original strand, 5328926 - 5329024
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||||||||  | || ||||||| |||||| ||||| | ||| |||||||| |||| ||||| ||||||| |||||    
T  5328926 atttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagtttatgaaaataagatgaaa 5329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 6310342 - 6310283
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||| ||| |||||||||||| ||||||| || ||| ||||||||| |||||||||||||    
T  6310342 atttctataacaaaagatgaagtaaagtctaattgttttcatataagctataagttgttt 6310283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 474
Target Start/End: Complemental strand, 28088335 - 28088240
Alignment:
Q  379 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||| |||||||  || | ||| ||||||||| ||||||  ||||| |||||  ||||||| |||||| ||||||||||||| ||||    
T  28088335 tatgataaaagataaaataaatgcagattgttttcatataagctataaactgttttcataagctatcatggagagctcatggaaataagctcaaaa 28088240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 1497943 - 1498033
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| | ||||||||||||||||| ||||||| |  ||||||  |||| |||||  |||| || |||||||||| ||||||| ||||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatcttggagagcttatgaaaataaggtgaaaa 1498033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 20671973 - 20671884
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||||||||| ||| ||| ||||| || ||| |||||| |||||  ||||||  ||||||| ||||| |||||||||||    
T  20671973 caaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatcatagagagctt-tggaagtaagctgaaaa 20671884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 468
Target Start/End: Complemental strand, 3181177 - 3181093
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagc 468  Q
    ||||||||| |||||||||||||| || ||||||||| | ||||  ||||| ||||| ||||| || ||||| ||| |||||||||    
T  3181177 acaaaagataaaataaagtcaaaccgttttcatataaaccataaactgttttcataagttatcttggagagc-tattgaaataagc 3181093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 10452478 - 10452413
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||| ||| |||||| || ||||||| ||||||| | ||||||||| ||||||||||||| |||||    
T  10452478 atttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgtttccataa 10452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 27792833 - 27792924
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| |||||| |||||||| | ||||||||| ||  ||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  27792833 acaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaataagctgaaaa 27792924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 24887401 - 24887301
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| |||| |||| ||||||||||||||||| ||||||||| ||| ||| ||||| |||||  |||| || ||||||||||| ||||||||||||    
T  24887401 atttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaa 24887302  T
Q  474 a 474  Q
    |    
T  24887301 a 24887301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 14548802 - 14548734
Alignment:
Q  411 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagcc 479  Q
    ||||||||| ||||||||||||| ||||| ||||  || ||||||||||||||||||||||||| ||||    
T  14548802 ttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcc 14548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 20192724 - 20192624
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||   ||| ||||   | ||||||||||||||| || |||||    
T  20192724 atttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaacttattcgggagagcttatggaaatgagttgaaa 20192625  T
Q  474 a 474  Q
    |    
T  20192624 a 20192624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 23785220 - 23785307
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||||||||||||| ||||||||| ||||||  ||||| || ||  | ||||| |||||||||||||| ||||||||||    
T  23785220 aagataaaataaagtcaaactgtattcatataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaa 23785307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 45433046 - 45432957
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||| |||| ||| ||| ||||||| | |||||| |||||| || || | ||| ||||||||||||||||||||||||||||    
T  45433046 aaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaa 45432957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 36101533 - 36101620
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataat-ttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||||||||||||  ||| ||||||||||||||||||| ||| ||  |||| || |||||||||| ||||||||||||||    
T  36101533 aagataaaataaagtcaaactgatttcgtataatctataagttgttt-cattatactatcctgaagagcttatgaaaataagctgaaaa 36101620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 478
Target Start/End: Complemental strand, 44374753 - 44374659
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||||||| ||||||||||||| ||| |||||| |||||| || |||||| | |||  |||| || |||||| ||||||||||| ||||||||||    
T  44374753 acaaaagataaaataaagtcaaattgttttcatacaatctaaaatttgttt-cgtaagatatcttggagagctaatggaaataaggtgaaaatagc 44374659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 51510271 - 51510216
Alignment:
Q  414 atataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    |||||| ||||||||||||| ||||| ||||| || ||||||||||||||||||||    
T  51510271 atataaactataagttgttttcataagttatcgtggagagcttatggaaataagct 51510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 479
Target Start/End: Original strand, 1816546 - 1816640
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagcc 479  Q
    ||||||| ||||||||||||||||| ||  |||||  |||||||||||| |||||  |||  || |||||||||  |||||||||||||| ||||    
T  1816546 aaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcc 1816640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 20502176 - 20502086
Alignment:
Q  385 aaaagatgaaataaagtcaaa-ctgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||||||||| |||| ||||||||  ||||||| ||||| |||||  |||| || ||||||||||  |||||||||||||    
T  20502176 aaaagatcaaataaagtcaaaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaataagctgaaaa 20502086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 21367638 - 21367719
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||| ||| ||| |||||| |||||||||||| |||||  |||| || ||| |||||| ||||||||||||||    
T  21367638 aaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaa 21367719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 467
Target Start/End: Original strand, 22232778 - 22232871
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 467  Q
    |||||||| ||||| ||| ||||||||||||||||| |||||||||    |||| | ||| |||||  |||||||||| ||||||| |||||||    
T  22232778 atttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtagggcttatgaaaataag 22232871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 23315591 - 23315676
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaa 472  Q
    ||||| ||||||||||||| ||| ||||||||  ||||||| ||||| |||||  |||  |  |||||||||||||||||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaataagctgaa 23315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 28779322 - 28779367
Alignment:
Q  388 agatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||    
T  28779322 agatgaaataaagtcaaactattttcatataagctataagttgttt 28779367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 33965600 - 33965504
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatat--aatctataagttgtttgcataatttatcatgtagagcttatgg-aaataagctgaaaata 476  Q
    ||||||| | ||||||||||||||||| |||||||  || ||||||| ||||| |||||  |||| || ||||||||||| ||| ||||||||||||    
T  33965600 acaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatggaaaaaaagctgaaaata 33965504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 471
Target Start/End: Complemental strand, 48286908 - 48286831
Alignment:
Q  394 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    |||||||| ||| ||| | |||||||  |||||  ||||| ||||| |||||||||||||||||| ||||||||||||    
T  48286908 aataaagttaaattgtttccatataagttataaactgttttcataagttatcatgtagagcttatagaaataagctga 48286831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 237397 - 237449
Alignment:
Q  422 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||| ||||| ||||| | ||||||||| ||||||||||||||||    
T  237397 tataagttgttttcataagttatcctatagagcttacggaaataagctgaaaa 237449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 473
Target Start/End: Complemental strand, 1125873 - 1125785
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgtt-catataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||||| |||| || ||||||||| || ||||||| |||||| |||||| | ||| ||||| || ||||||||||||| ||||||||||    
T  1125873 aaagataaaatcaattcaaactgtttttcatataagctataacttgttttcttaagttatcttggagagcttatggaagtaagctgaaa 1125785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 2318609 - 2318697
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataattta-tcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| |||| || ||||| ||| ||||||||| |||||||||||||  |||| ||| || || ||||||||| |||||||||||||||    
T  2318609 aagataaaatcaaatcaaattgttttcatataaactataagttgtttttataagttattcttggagagcttatagaaataagctgaaaa 2318697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 36139843 - 36139930
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataat-ttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||||||||||||  ||| ||||| ||||||||||||| ||| ||  |||| || |||||||||| ||||||||||||||    
T  36139843 aagataaaataaagtcaaactgatttcgtataagctataagttgttt-cattatactatcttgaagagcttatgaaaataagctgaaaa 36139930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 474
Target Start/End: Original strand, 43115048 - 43115108
Alignment:
Q  414 atataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| ||||||||||||| ||| |  ||||||  |||||||||||||||||||||||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaa 43115108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 458
Target Start/End: Original strand, 43875624 - 43875684
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttat 458  Q
    ||||||||||||  |||||||| ||||||||||||| |||||  ||||||| |||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 47904144 - 47904084
Alignment:
Q  411 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    |||||||||||||||||| |||| |||||  |||| || |||||||| |||||||||||||    
T  47904144 ttcatataatctataagtggttttcataagctatcgtgaagagcttacggaaataagctga 47904084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 474
Target Start/End: Complemental strand, 27291006 - 27290919
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||| || |||| | ||||||||||||| ||| ||||||||| |  |||| || |||| | ||||||||||||||||||    
T  27291006 aagataaaataaattcgaacttttttcatataatctaaaagctgtttgcattagctatcctgcagagttcatggaaataagctgaaaa 27290919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 474
Target Start/End: Original strand, 44295522 - 44295581
Alignment:
Q  415 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||||||| |||||  |||   | |||||||||||||||||||||||||    
T  44295522 tataatctataagttgttttcataagatatatcggagagcttatggaaataagctgaaaa 44295581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 473
Target Start/End: Original strand, 54775080 - 54775178
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||||||||  | || ||||||| |||||| ||||| | ||| |||||||| |||| ||||| ||||||| |||||    
T  54775080 atttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagtttatgaaaataagatgaaa 54775178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 25453963 - 25453877
Alignment:
Q  388 agatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| ||||||||||||||||| ||| ||||| ||||||  | ||| |||||  |||| || | |||||||| ||||||||||||||    
T  25453963 agataaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaa 25453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 40122861 - 40122812
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||||| ||||||||||||||||| |||||| || |||||||||||||    
T  40122861 acaaaagataaaataaagtcaaactgttttcata-aagctataagttgttt 40122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 424
Target Start/End: Complemental strand, 49587034 - 49586984
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctat 424  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| ||||    
T  49587034 atttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 8933745 - 8933834
Alignment:
Q  380 atgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    ||||||||| ||| |||||||||||||| | ||  || || || || ||||||| ||||| ||||| || |||||||||| |||||||||    
T  8933745 atgacaaaaaatgtaataaagtcaaactatttttgtagaagctctaggttgttttcataagttatcttggagagcttatgaaaataagct 8933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 476
Target Start/End: Original strand, 13481256 - 13481349
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 476  Q
    |||||| || ||||||||||||||| | |||| |||| ||| ||||||| | || || |||| ||| |||||||| | ||||||| ||||||||    
T  13481256 acaaaatataaaataaagtcaaactattttcaaataagctacaagttgtcttcaaaaattattatggagagcttacgaaaataagatgaaaata 13481349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 2201092 - 2201180
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| ||| ||||||||||||| ||||||||| ||||||| ||||| ||| |  |||| || | || ||| ||||| ||||||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaa 2201180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 12923432 - 12923384
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||| ||||||||||||||||  ||| ||||| |||||||||||||    
T  12923432 aaaagataaaataaagtcaaactgctttcttataagctataagttgttt 12923384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 16990255 - 16990179
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| ||||||| |||||||||  |||||||||||| | |||  ||||||| ||| ||| || ||||||||||||||    
T  16990255 aagttaaactgttttcatataagatataagttgttttcttaaactatcatgaagaacttgtgcaaataagctgaaaa 16990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 19679427 - 19679387
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    ||||||||||||||||| ||| ||||| |||||||||||||    
T  19679427 aaataaagtcaaactgttttcttataagctataagttgttt 19679387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 21862285 - 21862193
Alignment:
Q  383 acaaaagatgaaata-aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||||| |||||||| ||| ||||||||| |||| ||| |||  ||| |  ||||  | |||||||||||||||||||||||||    
T  21862285 acaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaataagctgaaaa 21862193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 438
Target Start/End: Complemental strand, 22214799 - 22214735
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcata 438  Q
    |||| ||| ||||| ||| ||||||||| ||| ||| ||||||||| ||||||||||||| ||||    
T  22214799 atttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttgttttcata 22214735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 26603164 - 26603244
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    ||||||||||||||    |||||||  ||||||| ||||||||||||  |||| || | |||||||||||||||| |||||    
T  26603164 aaataaagtcaaaccagcttcatattctctataacttgtttgcataagctatcctgcaaagcttatggaaataagttgaaa 26603244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 31337510 - 31337462
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgt 431  Q
    ||||||||| ||||||||||||||||| || ||||||  ||||||||||    
T  31337510 acaaaagataaaataaagtcaaactgtttttatataagttataagttgt 31337462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 36646500 - 36646400
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||||||||||||| |||||||||  || ||| |||||||||  ||||| |||||| |||||  |||| |  |||| |||| |||||||| |||||    
T  36646500 atttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaa 36646401  T
Q  474 a 474  Q
    |    
T  36646400 a 36646400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 37788821 - 37788877
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||||||| |||||||||| || | | ||| ||||||||||||||||||| |||||    
T  37788821 acaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataa 37788877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 474
Target Start/End: Original strand, 45205025 - 45205120
Alignment:
Q  379 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| ||||||| ||||||||||||||| | | ||||||| ||| ||||||||| |||||  |||||||||||| | ||||||||||||||||||    
T  45205025 tatgataaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaa 45205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 37842463 - 37842373
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||||||||| |||||||||||  |||| ||||||||||||| |||||  |||| || ||| |||||  ||||||||||||||    
T  37842463 caaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaa 37842373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 30257646 - 30257735
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||||||||||||| | ||||||| || |||||||||| |||||  |||| || || |||||| |||||||||||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaa 30257735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 30259605 - 30259504
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcat-aatttatcatgtagagcttatggaaataagctgaa 472  Q
    |||| ||| |||||| || ||||||||||||||||  || |||||| ||||||| ||||||||| ||  ||||||| |||||||||||||||||| ||||    
T  30259605 atttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataagttgaa 30259506  T
Q  473 aa 474  Q
    ||    
T  30259505 aa 30259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 478
Target Start/End: Original strand, 15515513 - 15515597
Alignment:
Q  394 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    |||||| ||||| ||| ||| ||||| ||||||||||||| ||||| |||||||| | |||||||||||||||  ||||||||||    
T  15515513 aataaaatcaaaatgttttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataaattgaaaatagc 15515597  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 474
Target Start/End: Original strand, 8130409 - 8130488
Alignment:
Q  395 ataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||| |||| |||| ||||||||||||| |||||  ||||||| | | |||||||||| ||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatcatggaaaacttatggaaacaagctgaaaa 8130488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 34380406 - 34380497
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||  |||||||||||||||| | ||||||   |||| ||||||| | ||| |||||||||| ||||||| |||||||||||||||    
T  34380406 acaaaagatacaataaagtcaaactgtttgcatatacattatatgttgttttcgtaacttatcatgtacagcttattgaaataagctgaaaa 34380497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 478
Target Start/End: Complemental strand, 44032108 - 44032013
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||||| | ||||||||||||| ||| ||||||||| ||||||  | ||| | ||| ||||| || ||||||||||||||| |||||||||||||    
T  44032108 acaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaattagctgaaaatagc 44032013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 473
Target Start/End: Complemental strand, 4078242 - 4078168
Alignment:
Q  399 agtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    ||||||||| | ||||||||||||||||||||||| |||||  |||||||  ||||| ||| |||||||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaataagctgaaa 4078168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 33527256 - 33527194
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatc 445  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  33527256 acaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatc 33527194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 476
Target Start/End: Complemental strand, 42556749 - 42556647
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||||||||||||||||||||| |||||||   || |||||| ||||||||||||| |||||  ||||||| |||| ||||   ||||| ||||||    
T  42556749 atttctatgacaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcataagctatcatggagagtttatatcaataaactgaaa 42556650  T
Q  474 ata 476  Q
    |||    
T  42556649 ata 42556647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 7218173 - 7218092
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| |||||  |||| || ||| |||||| ||||||| ||||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaa 7218092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 15360846 - 15360903
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgt 431  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  15360846 atttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 474
Target Start/End: Complemental strand, 12564964 - 12564892
Alignment:
Q  402 caaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||||| ||||||||||||| |||||  |||| | ||| ||||| ||||||||||||||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaa 12564892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 25479545 - 25479633
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| |||||| |||||| ||| ||||||||  ||||||||||||| |||||  |||| |  |||||||||| ||||||||||||||    
T  25479545 aaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 474
Target Start/End: Original strand, 30371104 - 30371200
Alignment:
Q  378 atatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| ||||||||| ||||||| ||||| ||| ||||||||| ||||||||||||| |||||   ||  || ||||| ||| |||||||||||||||    
T  30371104 atataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaa 30371200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 31517849 - 31517758
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||||||||| ||| ||  ||||||||| ||||||| ||| | |||||| | || || |||||||||| ||||||||||||||    
T  31517849 acaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaa 31517758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 39348076 - 39347985
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| |||||||||| |||  |  ||||| || ||||||||||||| |||||  |||| || | |||||||||||||||||||||||    
T  39348076 acaaaagataaaataaagtccaaccattctcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaa 39347985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 44940305 - 44940393
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| |||||||||||  |||| |||| ||||  |||||||||||| |||||| |||| || |||| || |||||||||||||||||    
T  44940305 caaaagataaaataaagtca--ctgttttcaaataagttataagttgttttcataatctatcctgaagaggttgtggaaataagctgaaaa 44940393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 469
Target Start/End: Complemental strand, 27738289 - 27738203
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagct 469  Q
    ||||||||| ||||||||||||| ||| ||||||||| |||||| |||||| |||||  |||   | |||||||||||| |||||||    
T  27738289 acaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatggatataagct 27738203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 473
Target Start/End: Complemental strand, 6933081 - 6932980
Alignment:
Q  372 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    |||||| ||| |||||| || ||||||||||||| ||| |||||| ||  ||| |||| ||| ||||| || || || ||||||||||||||||| ||||    
T  6933081 ccatttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagagcttatggaaataaactga 6932982  T
Q  472 aa 473  Q
    ||    
T  6932981 aa 6932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 3924576 - 3924676
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||| ||||| |||| ||| |||||||| ||| |||||||||| ||||||||  ||||  |||| || |||| |||||||||||||| ||||    
T  3924576 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaa 3924675  T
Q  474 a 474  Q
    |    
T  3924676 a 3924676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 476
Target Start/End: Original strand, 35017539 - 35017630
Alignment:
Q  387 aagatgaaataaagtcaaac--tgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 476  Q
    ||||| ||||||||||||||  ||| ||| ||||||||||| | ||||| |||||  | || || |||||||||||||||||| ||||||||    
T  35017539 aagataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaataagttgaaaata 35017630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 39777615 - 39777715
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| |||||||||  |||||||||||||||  |||||| || ||||| | ||||| | ||| |||| ||| |||||||| ||||||||||| |||    
T  39777615 atttctataacaaaagatagaataaagtcaaactgctttcatacaagctatatgatgttttcttaagttataatgaagagcttaaggaaataagctaaaa 39777714  T
Q  474 a 474  Q
    |    
T  39777715 a 39777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 46980237 - 46980153
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagc 468  Q
    |||||||| |||||||| |||||||| |||||||||  ||||| |||||| |||||  | | ||||| || ||||||||||||||    
T  46980237 caaaagataaaataaagacaaactgttttcatataagttataaattgttttcataaactgttatgtatagtttatggaaataagc 46980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 49175619 - 49175671
Alignment:
Q  422 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| |||||| ||  ||||||||||| |||||||||||||||||||||    
T  49175619 tataagttatttgcacaagctatcatgtagaacttatggaaataagctgaaaa 49175671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 5756804 - 5756745
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||| ||| ||||||||||| ||||||| ||||||| |||||||||  ||||||||||||    
T  5756804 atttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttt 5756745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 6074426 - 6074485
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||| ||| ||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||    
T  6074426 atttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttt 6074485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 474
Target Start/End: Original strand, 7472304 - 7472363
Alignment:
Q  415 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||| ||||| |||||  |||| || |||||||||| ||||||||||||||    
T  7472304 tataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 10581189 - 10581130
Alignment:
Q  380 atgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||||| ||| ||||||||||||||| | ||||| ||| ||||||||||||| |||||    
T  10581189 atgacaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataa 10581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 474
Target Start/End: Complemental strand, 33723479 - 33723400
Alignment:
Q  395 ataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||| ||| ||||||||| |||| |  ||||| |||||  || | |||| |||||||||||||||||||||||    
T  33723479 ataaagtcaaattgttttcatataaactatgaactgttttcataagctaccctgtaaagcttatggaaataagctgaaaa 33723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 474
Target Start/End: Complemental strand, 35590969 - 35590910
Alignment:
Q  415 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||| |||||||| | || |||||  ||||||| |||||||||||||||||||||||||    
T  35590969 tataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaa 35590910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 478
Target Start/End: Original strand, 52286639 - 52286734
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||||||| ||||||||| ||||  | ||||||||| ||||||  | ||| ||||| | ||| || |||| ||||||||||||||| ||||||||    
T  52286639 acaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaagagtttatggaaataagctaaaaatagc 52286734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 4215334 - 4215424
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| ||| ||||||||||||||||| ||||||||| |||| ||| |||| | ||| ||||| |  |||| ||||| ||||||| ||||||    
T  4215334 caaatgataaaataaagtcaaactgttttcatataaactatgagtcgttttcgtaagttatccttgagagtttatgcaaataaggtgaaaa 4215424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 6231916 - 6231834
Alignment:
Q  393 aaataaagtcaaactgtgtt-catataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||||| || ||||||||||||||| ||||| | |||  || | || ||| ||||| |||||||||||||||    
T  6231916 aaataaagtcaaactgtttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaa 6231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 17269221 - 17269295
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataag 467  Q
    ||||||||||||| ||| ||||||||| | ||||||||||| |||||  |||| || |||||||| || ||||||    
T  17269221 aaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttacggtaataag 17269295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 25006133 - 25006087
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| |||||    
T  25006133 aaataaagtcaaattgttttcatataagctataagttgttttcataa 25006087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 3320039 - 3319950
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||||||||  |||||  ||||||||| ||||||||||||  | |||  ||||||  ||| |||||||| ||||||||||||    
T  3320039 aaaagataaaataaagtagaactggtttcatataaactataagttgttaacgtaagctatcatagagatcttatggatataagctgaaaa 3319950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 5150908 - 5150989
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||| | ||||| |||  | ||| |||||| |||||  ||||||| ||||||||| |||||||| ||||||    
T  5150908 aaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataagttgaaaa 5150989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 433
Target Start/End: Complemental strand, 5422032 - 5421979
Alignment:
Q  380 atgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||||||||||| ||||| ||||||| ||| ||| ||||| |||||||||||||    
T  5422032 atgacaaaagataaaatatagtcaaattgttttcttataagctataagttgttt 5421979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 7137075 - 7137014
Alignment:
Q  415 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 476  Q
    ||||||||||||| ||||| |||||  |||| || ||| |||||| ||||||||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaata 7137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 7274057 - 7273992
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||| ||| ||||||||||||||||||||||| ||| |||||| ||  |||||| ||||| |||||    
T  7274057 atttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataa 7273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 12477394 - 12477305
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||||||||||||| ||||| |||  |||| | | |||  ||||  ||||||| ||||  |||||||||||||||||||    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaa 12477305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 27887217 - 27887136
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||  | | ||||||| ||||||||||||| |||||  ||||||| ||||| |||  ||||||||| ||||    
T  27887217 aaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaa 27887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 445
Target Start/End: Complemental strand, 37272694 - 37272633
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatc 445  Q
    |||||| | |||||||||||| |||| ||||||||| ||||||| ||||| ||||| |||||    
T  37272694 caaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttcataaattatc 37272633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 49517022 - 49517087
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||| ||| ||||||||| ||||||||||||| ||| ||||| ||| ||||||| ||||| |||||    
T  49517022 atttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataa 49517087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 4200181 - 4200281
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||||||  ||| ||||||||| |||||  |||||| | |||  |||| || || ||||||| ||||||||| |||    
T  4200181 atttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggcttatgaaaataagcttaaa 4200280  T
Q  474 a 474  Q
    |    
T  4200281 a 4200281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Original strand, 5047166 - 5047198
Alignment:
Q  442 tatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||||||||||||||||||||||||    
T  5047166 tatcatgaagagcttatggaaataagctgaaaa 5047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 12564616 - 12564517
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| |  ||||||||||| || |||||| ||  |||| ||||||| |||||  |||| || ||| ||||||||||||||||||||    
T  12564616 atttctataacaaaagataacctaaagtcaaaccgt-ttcatacaaggtataggttgttttcataagctatcttggagaacttatggaaataagctgaaa 12564518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 28467416 - 28467360
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||||||| ||||||||||||| | | ||||||||| ||| ||||||||| |||||    
T  28467416 acaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataa 28467360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 44151589 - 44151498
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||  |||||||| ||||||| | ||||||| ||||||||||||| |||||  |||| || | |||||||||||||||||||||||    
T  44151589 acaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaa 44151498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 478
Target Start/End: Original strand, 39505919 - 39506012
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    |||||||| ||||| ||||||||||| ||||||||| |  |||||||||| |||||  |||  || |||| ||||||||||||||||||||||||    
T  39505919 caaaagattaaatagagtcaaactgt-ttcatataagcattaagttgttttcataagctattctggagagtttatggaaataagctgaaaatagc 39506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 1417216 - 1417281
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||||| ||||||||| ||||||||||||| ||| ||||||||| | ||||||||||| |||||    
T  1417216 atttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataa 1417281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 31338471 - 31338560
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||||||||||||||| || ||||||  |||||||||||| |||||  |||| | | ||||||||| ||||||| ||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcctatggagcttatgaaaataaggtgaaaa 31338560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 45777287 - 45777230
Alignment:
Q  376 ttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||||| ||||||||| |||| |||||||||||| ||||||||| |||||||||||||    
T  45777287 ttatataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttt 45777230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 9527199 - 9527143
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||||||  |||||||||||||||| ||||||||| ||||||||||||| |||||    
T  9527199 acaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataa 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 17989132 - 17989049
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    |||||| || ||||||||||||||||| ||||||||| |||||| |||||| |||||  | || || |||||||||| ||||||    
T  17989132 acaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 29363483 - 29363562
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    ||||| ||||||||||||||||| ||||||| |  |||||| ||||  ||||| ||||| || |||||||||||||||||    
T  29363483 aagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaataa 29363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 30456559 - 30456476
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    ||||||||| ||||||||||||| ||| |||||||||  ||||||| |||| |||||  |||| || |||||||||| ||||||    
T  30456559 acaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 38010675 - 38010766
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||| |||| |||| ||| ||||||||| ||||||| ||||| |||||| |||| |  ||| |||||||||||||||| ||||    
T  38010675 acaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaa 38010766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 474
Target Start/End: Original strand, 21185039 - 21185140
Alignment:
Q  372 ccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    |||||| |||||||||| || || |||| | | ||||| ||||||||||||||||| ||||| |||||  |||  || ||||||||| ||||||||||||    
T  21185039 ccatttctatgacaaaaaataaattaaatttagactgttttcatataatctataagctgtttccataagatat-ttgaagagcttattgaaataagctga 21185137  T
Q  472 aaa 474  Q
    |||    
T  21185138 aaa 21185140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 44910566 - 44910656
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||  ||||||||||||||| | |||| | || ||| ||||||||| |||||  ||||||| ||||||| ||||||||||| |||||    
T  44910566 caaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagcttgtggaaataagccgaaaa 44910656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 18516348 - 18516303
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcata 438  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  18516348 aaataaagtcaaattgtgttcatataagctataagttgtttccata 18516303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 433
Target Start/End: Complemental strand, 45813288 - 45813239
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgttt 433  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||||||||    
T  45813288 caaaagataaaataaagtcaacttgttttcatataatctataagttgttt 45813239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 5006618 - 5006562
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||| |||||| |||||    
T  5006618 acaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataa 5006562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 27481388 - 27481320
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    |||||||||||| | ||||||| ||||||||| ||| |||||  ||||||| | |||||||||||||||    
T  27481388 aagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 466
Target Start/End: Original strand, 36370645 - 36370713
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    |||| ||||||| |||| |||| ||||||||||||| |||||  |||| || |||||||||||||||||    
T  36370645 aagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaataa 36370713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 465
Target Start/End: Complemental strand, 1373658 - 1373567
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaata 465  Q
    |||| ||||||||||||| || |||||||||||| | |||||||| |||||||  ||||| |||||  |||| || || ||||||| |||||    
T  1373658 atttttatgacaaaagataaattaaagtcaaacttttttcatatagtctataacctgttttcataaactatcttgaagggcttatgaaaata 1373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 3610849 - 3610758
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| |||| ||| |||||||| ||  ||||| ||||||||||||| | |||  |||| |  ||||||||| |||||||||||||||    
T  3610849 acaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 28165052 - 28165143
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| |||| |||||||| ||| || |||||| ||||||  ||| |  ||||  ||||||| |||||||||||||||||| ||||||    
T  28165052 acaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaa 28165143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 24909638 - 24909716
Alignment:
Q  396 taaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||| | | ||||||||| ||||||||||||| |||||  |||  || ||||||| |||||||| ||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttgttttcataagatattgtggagagcttgtggaaatatgctgaaaa 24909716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 474
Target Start/End: Complemental strand, 34754905 - 34754828
Alignment:
Q  396 taaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||| ||| ||||||||| |  |||||||||| |||||  |||| || |||||| ||||||||||||||||||    
T  34754905 taaagtcaaaatgtcttcatataagccgtaagttgttttcataaactatcctg-agagctgatggaaataagctgaaaa 34754828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 474
Target Start/End: Original strand, 3559010 - 3559087
Alignment:
Q  397 aaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||||| | |||||||||||||||  |||| ||| |  |||| |||| ||||||| |||||||||||||||    
T  3559010 aaagtcagactgtttacatataatctataagccgttttcattaactatcttgtatagcttatagaaataagctgaaaa 3559087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 1350337 - 1350269
Alignment:
Q  397 aaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaata 465  Q
    ||||||||||| | |||| |||||||||||| ||||| |||||  |||| || |||||||||| |||||    
T  1350337 aaagtcaaacttttttcacataatctataagctgttttcataaactatcctgaagagcttatgaaaata 1350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 24363671 - 24363619
Alignment:
Q  422 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||| |||||  |||| || |||| ||||||||||||||||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaa 24363619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 44241852 - 44241912
Alignment:
Q  415 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaat 475  Q
    ||||| ||||||||||||| |||||  |||| || | ||||||| ||||||||||||||||    
T  44241852 tataacctataagttgttttcataagctatcttgaatagcttatagaaataagctgaaaat 44241912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 374 - 477
Target Start/End: Complemental strand, 42181210 - 42181107
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||| |||||||||  || ||||||||| |||||||||||||||| || ||||| |  |||||| | |||||||||||||||    
T  42181210 atttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaagttatcctagagagctcaaggaaataagctgaaa 42181111  T
Q  474 atag 477  Q
    ||||    
T  42181110 atag 42181107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 37588467 - 37588378
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||| || |||||  || ||||||||| ||||||||||||| ||||| ||||  || |||||||||||||||||||||||||    
T  37588467 aaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 37588378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 14295458 - 14295558
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||| ||||||| ||||| | |||  |||| || ||||||| | ||| ||||||||||    
T  14295458 atttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaa 14295557  T
Q  474 a 474  Q
    |    
T  14295558 a 14295558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 466
Target Start/End: Original strand, 29054897 - 29054952
Alignment:
Q  411 ttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    ||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||    
T  29054897 ttcatataagctataagttgtttccataaactatcatgtagagcttatggaaataa 29054952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 36539708 - 36539798
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| |||||||||||| |||| ||||||||| |||||||||||||  |||| ||||  || ||||||| ||| ||||| |||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagcttttggtaataaactgaaaa 36539798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 37690744 - 37690654
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataat-ttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||| || |||||  || ||||||||| ||||||||||||| |||||  |||| ||| |||||||||||||||||||||||||    
T  37690744 aaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaa 37690654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 17368647 - 17368728
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| |||||||||||| ||  | ||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||||    
T  17368647 aaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaa 17368728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 37526306 - 37526217
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||| || |||||  || ||||||||| ||||||||||||| ||||| || |  || |||||||||||||||||||||||||    
T  37526306 aaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaa 37526217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 475
Target Start/End: Original strand, 32172614 - 32172706
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaat 475  Q
    ||||||||| |||| |||||||  ||| | ||||||| ||||||| ||||| |||||  ||||||| ||| || |||||||||||||||||||    
T  32172614 acaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaat 32172706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 41016150 - 41016230
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    ||||||| ||||||||| ||||||||| ||||||||||||| || ||   |||||| | |||||||| |||||||||||||    
T  41016150 aaataaattcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagctgaaa 41016230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 474
Target Start/End: Complemental strand, 28586891 - 28586784
Alignment:
Q  367 atacaccatttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    |||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||  |||||| |||||  |  |  |||| |  ||||||||| |||||||    
T  28586891 atacactatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataa 28586792  T
Q  467 gctgaaaa 474  Q
    ||||||||    
T  28586791 gctgaaaa 28586784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 26390897 - 26390808
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| |||||| || ||||||| ||||||||| ||||||| || || | ||| ||||| || |||||||||||||||||| ||||||    
T  26390897 caaaagataaaataa-gttaaactgttttcatataagctataagatggtttcctaagttatcctggagagcttatggaaataaggtgaaaa 26390808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 474
Target Start/End: Original strand, 9106796 - 9106873
Alignment:
Q  397 aaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||| ||  ||||||||||||| | ||| ||||| ||||| ||   |||||||||||||||||||||||    
T  9106796 aaagtcaaactgtttttgtataatctataagctattttcataagttatcctgctaagcttatggaaataagctgaaaa 9106873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 10272538 - 10272449
Alignment:
Q  385 aaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||| |||||||| ||| ||| ||||| ||||||||||||| |||||   ||| || |||| ||||| ||||||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaa 10272449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 17258982 - 17258901
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||| | ||| || |||| ||||| ||||| |||||  |||| || |||||||||| ||||||||||||||    
T  17258982 aaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaa 17258901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 18543315 - 18543215
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaact-gtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaa 472  Q
    |||| ||| |||||| || ||||||||||||||| || || ||||||  |||||||||||| |||||  |||| || ||||||||| |||||||||||||    
T  18543315 atttgtatcacaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttat-gaaataagctgaa 18543217  T
Q  473 aa 474  Q
    ||    
T  18543216 aa 18543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 39823239 - 39823174
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||||| ||||||||| |||||||||||||||   ||||||||| ||| ||||||||| |||||    
T  39823239 atttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataa 39823174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 18704153 - 18704054
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||| |||||||||||| || | || |||||| ||||||||||||| |||||  ||| |   ||| ||||||||||||||||||||    
T  18704153 atttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaa 18704055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 19177444 - 19177532
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatg-tagagcttatggaaataagctgaaaa 474  Q
    ||||| |||| ||||| |||||| ||||||||| ||||||||||||| | ||| || |||||  |||||||||||||||| | ||||||    
T  19177444 aagataaaattaagtctaactgttttcatataagctataagttgttttcgtaagttctcatgaaagagcttatggaaatatgttgaaaa 19177532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 32059694 - 32059642
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||| ||||||||||||||||| ||||||||| ||||||| ||||| |||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 474
Target Start/End: Original strand, 11104899 - 11104970
Alignment:
Q  403 aaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||  ||||||||||||| | ||| ||||| |||||    |||||||||||||||||||||||||    
T  11104899 aaactgtgtttgtataatctataagctattttcataagttatctgcaagagcttatggaaataagctgaaaa 11104970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 15003623 - 15003540
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataa 466  Q
    ||||||||| ||||||| ||||||| | ||||||||| |||||||| |||| |||||  ||||    |||||||||||||||||    
T  15003623 acaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatccaagagagcttatggaaataa 15003540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 429
Target Start/End: Complemental strand, 35135780 - 35135725
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagtt 429  Q
    |||| ||| ||||||||| ||||||||||||||| | ||||||||| |||||||||    
T  35135780 atttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagtt 429  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 474
Target Start/End: Complemental strand, 19138816 - 19138735
Alignment:
Q  395 ataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgt--agagcttatggaaataagctgaaaa 474  Q
    ||||| ||||| ||| |||| |||| ||||||||||||| |||||  ||| || |  |||||||||||||||||||||||||    
T  19138816 ataaattcaaattgttttcagataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaa 19138735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 31030229 - 31030147
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaat 475  Q
    ||||||||||||  |||  |||||||| |||||||| |||| | |||  | || || ||||||||||||||||||||||||||    
T  31030229 aaataaagtcaagttgttatcatataagctataagtagttttcctaagctgtcctggagagcttatggaaataagctgaaaat 31030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 476
Target Start/End: Original strand, 2568651 - 2568712
Alignment:
Q  415 tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaata 476  Q
    ||||| ||||||||||||| |||||  ||||||| |||||| ||| ||||||||| ||||||    
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaata 2568712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 15074820 - 15074767
Alignment:
Q  421 ctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||| ||||| ||||  || | |||||||||||||||||||||||    
T  15074820 ctataagttgttttcataagttatactggaaagcttatggaaataagctgaaaa 15074767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 41017698 - 41017776
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    ||||||||||||||  | ||| ||||| ||||||||||||| ||||| | |||||| | |||||||  |||||||||||||    
T  41017698 aaataaagtcaaaccattttcctataagctataagttgttttcataagtcatcatggaaagcttat--aaataagctgaaa 41017776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 41277456 - 41277403
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||| ||||||||||||||||| |||||||||  || ||||||||| |||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataa 41277403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 478
Target Start/End: Complemental strand, 3970786 - 3970694
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    |||||| |||||||||||| |||  ||| ||||||||| ||| |  || |||||  |||  || |||||||||| ||||||||||||||||||    
T  3970786 aaagataaaataaagtcaatctgctttcttataatctagaagctaatttcataagctatactggagagcttatgaaaataagctgaaaatagc 3970694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 474
Target Start/End: Original strand, 8985633 - 8985713
Alignment:
Q  394 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||||| | |||||||||| |  ||| | ||| |||||  |||| | ||||||||||||||| ||||||||||    
T  8985633 aataaagtcaaactattttcatataatttgcaagctattttcataagctatcctatagagcttatggaaagaagctgaaaa 8985713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 31688059 - 31688095
Alignment:
Q  442 tatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  31688059 tatcatgtagagcttatgaaaataagttgaaaatagc 31688095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 42583101 - 42583201
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||||||||||||||||||| ||| ||| ||| | |||   ||||| ||||| ||||||||||| || ||| |||||| |  ||||||||||    
T  42583101 atttctataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaaa 42583200  T
Q  474 a 474  Q
    |    
T  42583201 a 42583201  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 477
Target Start/End: Original strand, 30013179 - 30013273
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 477  Q
    ||||||| | |||| |||||||||||| | ||||||| ||||||| ||||| |||||  |||| |||||| || |||||||||||||||||||||    
T  30013179 acaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatag 30013273  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 26284894 - 26284813
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||||| |||||||||  || ||||||||| | ||| ||||| |||| |||||||| ||||||||||||||    
T  26284894 aaataaagtcaaactgttttcatataaagtacaagttgttttcgtaagttatcctgtatagcttatgaaaataagctgaaaa 26284813  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 474
Target Start/End: Original strand, 11795049 - 11795144
Alignment:
Q  379 tatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||| ||  |||||||||| ||||| |||||||||  |||||| || || |||||  ||| ||| |||||||||||||||||||||||||    
T  11795049 tatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaa 11795144  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 477
Target Start/End: Complemental strand, 6509408 - 6509318
Alignment:
Q  387 aagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 477  Q
    ||||| ||||||||||||| ||| || |||||| ||||||| ||||| |||||  |||| || ||||||||| |||||||| |||||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatag 6509318  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 474
Target Start/End: Complemental strand, 41336764 - 41336663
Alignment:
Q  373 catttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaa 472  Q
    ||||| ||||||||||||| ||||| ||||||| ||| ||||||||| ||| || |||||| |||||  ||||  | |||||||  ||||||||||||||    
T  41336764 catttttatgacaaaagataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaa 41336665  T
Q  473 aa 474  Q
    ||    
T  41336664 aa 41336663  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 7645955 - 7646030
Alignment:
Q  399 agtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| ||| ||||| ||| ||||||||||||| |||||  || | |||| |||||||||||||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaa 7646030  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 31862454 - 31862545
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| | ||||||||||||| |  || ||||| ||||||| ||||| ||||| ||||| |  |||||||||| ||||||||||||||    
T  31862454 acaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaa 31862545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 7918844 - 7918791
Alignment:
Q  421 ctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||| |||||  |||| |||||||||| |||||||||||||||||    
T  7918844 ctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaa 7918791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 10383856 - 10383933
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctg 470  Q
    ||||||| |||| |||| ||| ||||||||||| | ||||| | |||  |||||| ||||||||||||||||||||||    
T  10383856 aaataaaatcaagctgttttcgtataatctatatgctgttttcgtaaactatcatatagagcttatggaaataagctg 10383933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 29973052 - 29973133
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||| | |||| |||| ||||||||||||| |||||  |||| |  |||| |||||||||||| |||||||    
T  29973052 aaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaa 29973133  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 34551073 - 34551166
Alignment:
Q  375 tttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagc 468  Q
    ||||||| ||||||||| | || |||||||| ||| ||||| |||  |||||||||||| | ||| ||||| || |||||||||| ||||||||    
T  34551073 tttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 34551166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 471
Target Start/End: Complemental strand, 37776802 - 37776725
Alignment:
Q  394 aataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctga 471  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||| |   ||| || |||| |||||||||||||||||    
T  37776802 aataaagtcaaattgtgtttatataaactataagttgtttacatcagcaatcttgaagagtttatggaaataagctga 37776725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 39561640 - 39561559
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||| |  ||| ||||| ||| ||||||||||||| | |||  ||||||| | |||||||||||||||||||||||    
T  39561640 aaataaagtcgatttgttttcatctaaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagctgaaaa 39561559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 12361156 - 12361244
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||| |||| |||||||| ||| ||||||||| ||||||| ||||| ||||| ||||   | |||||| ||||||||||| ||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataagttgaaaa 12361244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 34770853 - 34770909
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    ||||||||| ||||||||||||| ||| ||||| ||| ||||||||||||| |||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataa 34770909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 43704473 - 43704394
Alignment:
Q  397 aaagtcaaactgtgttcatataatctataagttgtttgcata--atttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  | ||||| |  | |||||||||||||||||| ||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataagagttatcctcaaaagcttatggaaataagcttaaaa 43704394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 10460579 - 10460646
Alignment:
Q  398 aagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaata 465  Q
    |||||||||| | |||||| || |||||||| |||| |||||  |||||||||||||||| |||||||    
T  10460579 aagtcaaactattttcatacaagctataagtggttttcataagctatcatgtagagcttacggaaata 10460646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 11183506 - 11183597
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| |||| ||| |||||||||||||  |||||| | ||||||| ||||| || ||  || | || |||||||||||||||||||||||||    
T  11183506 acaacagataaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaa 11183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 477
Target Start/End: Complemental strand, 35298587 - 35298492
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttca-tataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatag 477  Q
    ||||||||| |||||||| ||||| || |||| ||||| ||||||||||||| |||||  |||||||  |||| ||   |||||||||||||||||    
T  35298587 acaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctatcatggtgagcctacataaataagctgaaaatag 35298492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 41620400 - 41620309
Alignment:
Q  383 acaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||| ||||||||||||| | |||||||||| |||| ||| |||||  ||||  |||| ||| |||||| || |||||||| |||||    
T  41620400 acaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagcttttgaaaataagcggaaaa 41620309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 42215410 - 42215324
Alignment:
Q  388 agatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| ||||||||||||||||| ||  ||||||||||||  | ||| ||||   |||| || |||||||||| ||||||||||||||    
T  42215410 agataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaa 42215324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 6864558 - 6864477
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||||||||||| | ||||| |||  |||||||||||| |||||  |||  || |||||||  ||||||||||||||||    
T  6864558 aaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagcttgaggaaataagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 478
Target Start/End: Original strand, 27028830 - 27028887
Alignment:
Q  421 ctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaatagc 478  Q
    ||||||| ||||| |||||  |||| || |||||||||| ||||||||||||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagc 27028887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 28769438 - 28769357
Alignment:
Q  393 aaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||| |||||||||| | ||| ||||| ||||||| ||||| |||||  |||  || |||| ||||||||||||||||||||    
T  28769438 aaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaa 28769357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 38561678 - 38561743
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataa 439  Q
    |||||||| ||||||||| ||||||||||||||| | || || ||  ||||||||||||| |||||    
T  38561678 atttatataacaaaagataaaataaagtcaaactatttttatctatactataagttgttttcataa 38561743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 478
Target Start/End: Original strand, 7646234 - 7646262
Alignment:
Q  450 agagcttatggaaataagctgaaaatagc 478  Q
    |||||||||||||||||||||||||||||    
T  7646234 agagcttatggaaataagctgaaaatagc 7646262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 9956884 - 9956832
Alignment:
Q  422 tataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||||||| |||||| |||| || ||| |||||| ||||||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 426
Target Start/End: Complemental strand, 34788545 - 34788493
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataa 426  Q
    |||| |||||| |||||| ||||||||||||||||| | ||||||| ||||||    
T  34788545 atttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 39881802 - 39881770
Alignment:
Q  442 tatcatgtagagcttatggaaataagctgaaaa 474  Q
    ||||||| |||||||||||||||||||||||||    
T  39881802 tatcatggagagcttatggaaataagctgaaaa 39881770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 27528 - 27628
Alignment:
Q  374 atttatatgacaaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaa 473  Q
    |||| ||| ||| ||||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||  |||| ||   ||| | ||||||||||||||||    
T  27528 atttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttggtaagcgtgtggaaataagctgaaa 27627  T
Q  474 a 474  Q
    |    
T  27628 a 27628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 453
Target Start/End: Original strand, 20143 - 20210
Alignment:
Q  386 aaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagag 453  Q
    |||||| |||||||||||||| ||  |||||||| |||| |||||||| ||||| |||| ||||||||    
T  20143 aaagataaaataaagtcaaacagttatcatataagctattagttgttttcataagttattatgtagag 20210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 160080 - 159991
Alignment:
Q  384 caaaagatgaaataaagtcaaactgtgttcatataatctataagttgtttgcataatttatcatgtagagcttatggaaataagctgaaaa 474  Q
    |||||||| ||||||||||||||||  | |||||||  |||||| ||||| |||||  |||| |  ||||||| |||||||||||||||||    
T  160080 caaaagataaaataaagtcaaactgaat-catataagttataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaaa 159991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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