View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13162_high_7 (Length: 359)
Name: NF13162_high_7
Description: NF13162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13162_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 13 - 340
Target Start/End: Complemental strand, 14520039 - 14519712
Alignment:
| Q |
13 |
aatatttcataatcagccagaatattcatcacataaggacaaaattactcaaaaaacaaattctgattcagcaacttattgataaaagtagccaaaagca |
112 |
Q |
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| T |
14520039 |
aatatttcataatcaaccataatattcatcacataaggacaaaattactcaaaaaacaaattctgattcagcaacttattgataaaagtagccaaaagca |
14519940 |
T |
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| Q |
113 |
agcataaccattaaaatatatacttttgtacagttcacagcccatctcaaacttctaggcatcttcataccatgtaacaagggaatccacgtcttctaaa |
212 |
Q |
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| T |
14519939 |
agcataaccattaaaatatatacttttgtacagttcacagcccatctcaaacttctaggcatcttcataccatgtaacaagggaatccacgtcttctaaa |
14519840 |
T |
|
| Q |
213 |
ttaacctaattttatgcattagcaatttaacaattgttttaattaaaagcaagtcctttaaaaattaaaagaaaaccaacactatttccaccatattcca |
312 |
Q |
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| T |
14519839 |
tgaacctaattttatgcattagcaatttaacaattgttttaattaaaagcaagtcctttaaaaattaaaagaaaaccaacactatttccaccatattcca |
14519740 |
T |
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| Q |
313 |
ctatataagctatctataacttccacac |
340 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
14519739 |
ctatataagctatctataacttccacac |
14519712 |
T |
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