View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13167_low_3 (Length: 432)
Name: NF13167_low_3
Description: NF13167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13167_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 7 - 425
Target Start/End: Original strand, 34868248 - 34868666
Alignment:
| Q |
7 |
aatctctcttgtgtttctcttgttctacattatgtattgaaattgtgacttagaattgatgatttaatgaaattttggaaattggctacaatgcaaacca |
106 |
Q |
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| T |
34868248 |
aatctctcttgtgtttctcttgttctacattatgtattgaaattgtgactcagaattgatgatttaatgaaattttgaaaattggctacaatgcaaacca |
34868347 |
T |
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| Q |
107 |
aatgagtgaacttctagggaacatagatgctaagggttgagtgtctttggacaccgatgggaaaaaattggtaaatgagtagaaattcaatttgttcatg |
206 |
Q |
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| T |
34868348 |
aatgagtgaacttctagggaacatagatgctaagggttgagtgtctttggacaccgatgggaaaaaattggtaaatgagtagaaattcaatttgttcatg |
34868447 |
T |
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| Q |
207 |
gaaagtttatggaaactaaattattgtaaccccttttgtatcatttgtaaagaaactcattgacaataaagtggagagatctttctcctccagccgtgta |
306 |
Q |
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| T |
34868448 |
gaaagtttatggaaactaatttattgtaaccccttttgaatcatttgtaaagaaactcattgacaataaagtggagagatctttctcctccagccgtgta |
34868547 |
T |
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| Q |
307 |
tcattgctagaacgaactaaccgaccaaatcttggtgtgtgtttctcttctctctttattttacatttggttactagattatatctagttctatggttgt |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34868548 |
tcattgctagaacgaactaaccgaccaaatcttggtgtgtgtttctcttctctctttattttacatttggttactagattatatctagttctatggttgt |
34868647 |
T |
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| Q |
407 |
cgtttgaggttatttgatt |
425 |
Q |
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| T |
34868648 |
tgtttgaggttatttgatt |
34868666 |
T |
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