View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1316_low_6 (Length: 201)
Name: NF1316_low_6
Description: NF1316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1316_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45264679 - 45264560
Alignment:
| Q |
1 |
atcaatttcggatgtctgaaagctattttggaagtttaaagaacaatatactttccacaaatgtagctgacatattcctacaactacgtaggaatatgac |
100 |
Q |
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| T |
45264679 |
atcaatttcgggtgtctgaaagctattttgaaagcttaaagaacaatatgctttgcacaaatgcagctgacatattcctacaactacgtaggaatatgac |
45264580 |
T |
|
| Q |
101 |
acattcatctccacctatga |
120 |
Q |
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|||||||||||||||||||| |
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| T |
45264579 |
acattcatctccacctatga |
45264560 |
T |
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