View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13172_low_15 (Length: 288)
Name: NF13172_low_15
Description: NF13172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13172_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 48121102 - 48120889
Alignment:
| Q |
26 |
atgaacatgagagccaatagcagtagaaatttccctggaagaacatacaggttttacaatgggaaatccctctatgaatttggctatggattaagctact |
125 |
Q |
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| T |
48121102 |
atgaacatgagagccaatagcagtagaaatttccctggaagaacatacaggttttacaatgggaaatccctctatgaatttggctatggattaagctact |
48121003 |
T |
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| Q |
126 |
ccacattctccacccacatagcatctgctccttccaccataatgatccagaaaaacacatccatttcaaaaccacttaataatatcttccttgatgatca |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48121002 |
ccacattctccacccacatagcatctgctccttccaccataatgctccagaaaaacacatccatttcaaaaccacttaataatatcttccttgatgatca |
48120903 |
T |
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| Q |
226 |
agtaattgatatct |
239 |
Q |
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|||||||||||||| |
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| T |
48120902 |
agtaattgatatct |
48120889 |
T |
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