View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13173_high_38 (Length: 244)

Name: NF13173_high_38
Description: NF13173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13173_high_38
NF13173_high_38
[»] chr8 (32 HSPs)
chr8 (34-125)||(29374236-29374327)
chr8 (126-228)||(15197333-15197435)
chr8 (126-228)||(12831047-12831149)
chr8 (124-228)||(14547920-14548024)
chr8 (126-228)||(504119-504221)
chr8 (127-228)||(5957831-5957932)
chr8 (125-228)||(44507085-44507188)
chr8 (126-228)||(23122595-23122697)
chr8 (126-228)||(34012294-34012396)
chr8 (126-228)||(40423941-40424043)
chr8 (125-226)||(37038478-37038579)
chr8 (126-228)||(1179938-1180040)
chr8 (126-228)||(15048180-15048281)
chr8 (123-228)||(10284629-10284734)
chr8 (124-228)||(4854861-4854965)
chr8 (131-228)||(10621085-10621182)
chr8 (123-228)||(16383374-16383479)
chr8 (124-228)||(24307791-24307895)
chr8 (126-228)||(43414579-43414681)
chr8 (147-228)||(8841430-8841511)
chr8 (124-228)||(15258927-15259031)
chr8 (124-228)||(34307214-34307318)
chr8 (124-228)||(42221513-42221617)
chr8 (123-189)||(24307626-24307692)
chr8 (123-228)||(16056399-16056504)
chr8 (125-228)||(32032724-32032826)
chr8 (127-228)||(9122196-9122287)
chr8 (125-228)||(17443824-17443927)
chr8 (126-228)||(30479472-30479574)
chr8 (126-228)||(20074940-20075034)
chr8 (126-208)||(14055610-14055692)
chr8 (126-206)||(30183895-30183975)
[»] chr4 (35 HSPs)
chr4 (123-228)||(42044365-42044470)
chr4 (123-228)||(50052426-50052531)
chr4 (124-228)||(48183047-48183151)
chr4 (126-228)||(11511460-11511562)
chr4 (123-228)||(480445-480550)
chr4 (126-228)||(6034044-6034146)
chr4 (126-228)||(41236347-41236449)
chr4 (123-228)||(29239883-29239988)
chr4 (124-228)||(29977883-29977987)
chr4 (125-228)||(29234243-29234346)
chr4 (126-228)||(3481654-3481756)
chr4 (126-224)||(54473535-54473633)
chr4 (126-228)||(31910192-31910294)
chr4 (162-228)||(41823918-41823984)
chr4 (124-228)||(24995105-24995209)
chr4 (124-228)||(32766956-32767060)
chr4 (125-228)||(47986207-47986310)
chr4 (125-228)||(50813890-50813993)
chr4 (123-228)||(19670714-19670819)
chr4 (131-228)||(53352564-53352660)
chr4 (124-228)||(23608233-23608337)
chr4 (126-226)||(50526171-50526271)
chr4 (119-228)||(40574772-40574881)
chr4 (124-228)||(55475189-55475293)
chr4 (147-228)||(17983741-17983822)
chr4 (124-224)||(29547961-29548061)
chr4 (125-228)||(44536744-44536846)
chr4 (126-228)||(8343161-8343263)
chr4 (125-227)||(28480267-28480369)
chr4 (125-227)||(28481142-28481244)
chr4 (125-227)||(28482017-28482119)
chr4 (124-228)||(48647724-48647828)
chr4 (126-228)||(55079711-55079814)
chr4 (124-228)||(47104542-47104646)
chr4 (134-228)||(29589738-29589831)
[»] chr7 (38 HSPs)
chr7 (125-228)||(36361911-36362014)
chr7 (124-228)||(7389387-7389491)
chr7 (125-228)||(36362025-36362128)
chr7 (127-228)||(32951491-32951592)
chr7 (123-228)||(38837214-38837319)
chr7 (124-228)||(8080381-8080485)
chr7 (129-228)||(3783998-3784097)
chr7 (126-228)||(38267040-38267142)
chr7 (123-228)||(40957704-40957809)
chr7 (125-228)||(3434561-3434664)
chr7 (126-228)||(19329842-19329944)
chr7 (126-228)||(35137533-35137635)
chr7 (126-228)||(4999512-4999614)
chr7 (124-228)||(19436185-19436289)
chr7 (124-228)||(36208171-36208275)
chr7 (126-220)||(46374808-46374902)
chr7 (124-228)||(38044195-38044299)
chr7 (129-228)||(3694370-3694469)
chr7 (126-228)||(8238212-8238315)
chr7 (125-228)||(46033799-46033902)
chr7 (131-228)||(35522881-35522978)
chr7 (125-228)||(22343360-22343463)
chr7 (125-228)||(41915740-41915843)
chr7 (126-228)||(21234401-21234503)
chr7 (123-228)||(11044185-11044280)
chr7 (126-228)||(32564424-32564526)
chr7 (115-192)||(10343597-10343674)
chr7 (126-228)||(40846111-40846213)
chr7 (123-228)||(18207177-18207281)
chr7 (123-226)||(7727903-7728006)
chr7 (125-228)||(26296643-26296746)
chr7 (123-228)||(35468853-35468958)
chr7 (126-228)||(31735884-31735979)
chr7 (123-195)||(45223039-45223111)
chr7 (126-228)||(39255922-39256023)
chr7 (156-228)||(16374822-16374894)
chr7 (125-194)||(42972977-42973045)
chr7 (127-195)||(32045838-32045906)
[»] chr1 (34 HSPs)
chr1 (123-226)||(2581912-2582015)
chr1 (123-228)||(32813244-32813349)
chr1 (126-228)||(9474874-9474976)
chr1 (124-224)||(38632323-38632423)
chr1 (125-228)||(50630457-50630560)
chr1 (126-228)||(43132-43234)
chr1 (126-228)||(3000319-3000421)
chr1 (123-228)||(8346386-8346491)
chr1 (123-228)||(38595151-38595256)
chr1 (126-228)||(27564733-27564835)
chr1 (126-228)||(47452318-47452420)
chr1 (126-224)||(48716284-48716382)
chr1 (125-226)||(51898683-51898784)
chr1 (125-228)||(41758804-41758907)
chr1 (129-228)||(44548374-44548473)
chr1 (126-228)||(50590998-50591100)
chr1 (123-228)||(5958998-5959103)
chr1 (124-224)||(26274430-26274530)
chr1 (127-226)||(11152378-11152476)
chr1 (133-228)||(26440741-26440836)
chr1 (126-225)||(37649198-37649297)
chr1 (125-228)||(37926436-37926539)
chr1 (126-226)||(3302533-3302633)
chr1 (124-228)||(49811525-49811629)
chr1 (146-221)||(44334175-44334250)
chr1 (126-228)||(41608491-41608593)
chr1 (147-228)||(45044558-45044639)
chr1 (156-228)||(13414791-13414863)
chr1 (123-224)||(23597093-23597194)
chr1 (131-224)||(44453984-44454077)
chr1 (126-228)||(47748443-47748544)
chr1 (125-194)||(7740732-7740801)
chr1 (152-208)||(750239-750294)
chr1 (174-226)||(48489348-48489400)
[»] chr5 (31 HSPs)
chr5 (126-228)||(40145407-40145509)
chr5 (123-228)||(13811649-13811754)
chr5 (123-228)||(18520882-18520987)
chr5 (126-226)||(14831814-14831914)
chr5 (124-228)||(36732940-36733044)
chr5 (125-228)||(2740273-2740376)
chr5 (126-228)||(28177775-28177877)
chr5 (126-228)||(33149636-33149738)
chr5 (124-228)||(15409608-15409712)
chr5 (126-228)||(35785199-35785301)
chr5 (126-228)||(35943890-35943992)
chr5 (126-224)||(42414304-42414402)
chr5 (122-228)||(3921263-3921369)
chr5 (126-228)||(26720516-26720618)
chr5 (126-228)||(26990265-26990367)
chr5 (125-228)||(6679697-6679800)
chr5 (123-226)||(31008985-31009088)
chr5 (125-228)||(2252166-2252269)
chr5 (123-227)||(38296200-38296304)
chr5 (124-228)||(39688895-39688999)
chr5 (125-217)||(41470425-41470517)
chr5 (126-228)||(6259999-6260101)
chr5 (126-228)||(33825322-33825424)
chr5 (127-185)||(36875644-36875702)
chr5 (124-228)||(9603811-9603915)
chr5 (131-189)||(10356639-10356698)
chr5 (147-194)||(16327922-16327969)
chr5 (149-228)||(39557515-39557594)
chr5 (174-224)||(31132392-31132442)
chr5 (170-228)||(21370048-21370106)
chr5 (126-226)||(20073516-20073616)
[»] chr3 (36 HSPs)
chr3 (126-228)||(53982011-53982113)
chr3 (126-228)||(33644200-33644302)
chr3 (123-228)||(49607411-49607516)
chr3 (125-228)||(17470404-17470507)
chr3 (126-228)||(26141530-26141632)
chr3 (131-228)||(52629305-52629402)
chr3 (124-228)||(27714889-27714993)
chr3 (124-228)||(54868893-54868997)
chr3 (126-228)||(8076393-8076495)
chr3 (127-228)||(31456690-31456791)
chr3 (126-228)||(51419358-51419460)
chr3 (124-228)||(11095353-11095455)
chr3 (123-228)||(11347920-11348025)
chr3 (124-228)||(41189762-41189866)
chr3 (126-228)||(20764913-20765015)
chr3 (130-228)||(48587089-48587187)
chr3 (131-228)||(26754700-26754797)
chr3 (124-228)||(11907369-11907473)
chr3 (124-228)||(33118849-33118953)
chr3 (126-228)||(14623837-14623939)
chr3 (130-228)||(30801731-30801829)
chr3 (123-197)||(36707453-36707527)
chr3 (126-228)||(47531865-47531967)
chr3 (125-228)||(8956761-8956864)
chr3 (125-228)||(9562998-9563101)
chr3 (125-228)||(24699952-24700055)
chr3 (125-228)||(48375704-48375807)
chr3 (127-228)||(13898053-13898154)
chr3 (148-228)||(36331327-36331407)
chr3 (125-228)||(35536625-35536728)
chr3 (126-228)||(45058551-45058652)
chr3 (124-194)||(35965806-35965876)
chr3 (125-195)||(21746212-21746284)
chr3 (131-191)||(25395368-25395428)
chr3 (117-228)||(41080700-41080809)
chr3 (129-228)||(25407145-25407245)
[»] chr2 (37 HSPs)
chr2 (126-228)||(13438343-13438445)
chr2 (118-228)||(33436098-33436208)
chr2 (124-228)||(9058478-9058582)
chr2 (125-228)||(5574486-5574589)
chr2 (129-228)||(28863458-28863557)
chr2 (123-228)||(38273140-38273245)
chr2 (124-228)||(10249380-10249484)
chr2 (125-228)||(7465733-7465836)
chr2 (126-228)||(17473020-17473122)
chr2 (126-228)||(28381653-28381755)
chr2 (125-226)||(32505648-32505749)
chr2 (124-228)||(30915461-30915565)
chr2 (126-228)||(40613900-40614002)
chr2 (126-228)||(40701478-40701580)
chr2 (129-228)||(19930818-19930917)
chr2 (126-228)||(27864704-27864806)
chr2 (123-228)||(20700812-20700917)
chr2 (123-228)||(42257190-42257295)
chr2 (125-224)||(2533123-2533221)
chr2 (125-228)||(36168835-36168938)
chr2 (126-228)||(38732354-38732456)
chr2 (123-228)||(38882809-38882916)
chr2 (123-228)||(45097733-45097838)
chr2 (126-226)||(4060685-4060785)
chr2 (123-228)||(26891502-26891607)
chr2 (124-195)||(17823782-17823853)
chr2 (126-224)||(43490121-43490219)
chr2 (147-228)||(2997485-2997566)
chr2 (114-228)||(33436199-33436313)
chr2 (126-228)||(17820002-17820104)
chr2 (132-228)||(3439985-3440081)
chr2 (123-228)||(13365348-13365455)
chr2 (170-226)||(3737987-3738043)
chr2 (124-191)||(15428775-15428842)
chr2 (127-228)||(41575138-41575240)
chr2 (176-228)||(3034981-3035033)
chr2 (176-228)||(3154193-3154245)
[»] chr6 (22 HSPs)
chr6 (125-228)||(11427615-11427720)
chr6 (126-228)||(17598554-17598656)
chr6 (126-228)||(32869678-32869780)
chr6 (129-228)||(22880656-22880755)
chr6 (125-228)||(31976247-31976350)
chr6 (123-228)||(6209463-6209568)
chr6 (126-228)||(29857827-29857929)
chr6 (122-228)||(30341358-30341464)
chr6 (124-228)||(15990040-15990144)
chr6 (118-228)||(31110759-31110867)
chr6 (126-228)||(15508022-15508124)
chr6 (126-228)||(31109398-31109500)
chr6 (123-228)||(23128125-23128230)
chr6 (123-228)||(15832574-15832679)
chr6 (123-194)||(12732479-12732550)
chr6 (130-228)||(28536486-28536582)
chr6 (148-228)||(4231570-4231650)
chr6 (126-228)||(31953028-31953130)
chr6 (131-194)||(9379744-9379807)
chr6 (169-228)||(30870057-30870116)
chr6 (125-191)||(22422053-22422119)
chr6 (127-200)||(946377-946450)
[»] scaffold0321 (1 HSPs)
scaffold0321 (123-228)||(10107-10212)
[»] scaffold1268 (1 HSPs)
scaffold1268 (117-228)||(927-1038)
[»] scaffold1267 (1 HSPs)
scaffold1267 (117-228)||(927-1038)
[»] scaffold0237 (1 HSPs)
scaffold0237 (126-228)||(4029-4131)
[»] scaffold0316 (1 HSPs)
scaffold0316 (149-228)||(17077-17156)
[»] scaffold0018 (1 HSPs)
scaffold0018 (142-228)||(152514-152600)


Alignment Details
Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 29374236 - 29374327
Alignment:
Q  34 cacttgtgcatggcatggtataccgtttaaaggttatcagtagccgtaattttcatgctctcctctccacgcgtttagtatcttttatcaaa 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  29374236 cacttgtgcatggcatggtataccgtttaaaggttatcagtagccgtaattttcatgctctcctttccacgcgtttagtatcttttctcaaa 29374327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  226 tct 228  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||| ||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  226 tct 228  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 14547920 - 14548024
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||| ||||||||||||| |||||||||||||||| |  || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  224 tctct 228  Q
    |||||    
T  14548020 tctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| |  || ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  226 tct 228  Q
    |||    
T  504121 tct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 5957831 - 5957932
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    |||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  227 ct 228  Q
    ||    
T  5957931 ct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 44507188 - 44507085
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||| ||||||||| ||||||  | |||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  225 ctct 228  Q
    ||||    
T  44507088 ctct 44507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||| ||||||||||| |  || ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  226 tct 228  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||||||| |||||| || || |||||||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  226 tct 228  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 40424043 - 40423941
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||| || |||||||||||||||| || || ||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  226 tct 228  Q
    |||    
T  40423943 tct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||   ||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  225 ct 226  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||||||| |||||| || || ||||||||||||||||||||||||||||||  ||||  | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  226 tct 228  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| || || ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  226 tct 228  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| ||||||||||||||| |||| ||| |||||||  | || |||||||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  223 ttctct 228  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||  |||||||||||||||| || |||||||| ||| |||||||||| | || | ||||||||||| ||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  224 tctct 228  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 10621182 - 10621085
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||  ||||||||| |||||| || || ||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctct 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 16383374 - 16383479
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| |||||    
T  16383374 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 16383473  T
Q  223 ttctct 228  Q
    ||||||    
T  16383474 ttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||| ||||||||||||||||||| || |||||||||||||||||||| | || | || |||||||| ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  224 tctct 228  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 43414681 - 43414579
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  ||||| |||||| ||| || || |||||||||||||||||| |||||| |||||||||| || ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  226 tct 228  Q
    |||    
T  43414581 tct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 8841511 - 8841430
Alignment:
Q  147 cttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||| |||| || || |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  8841511 cttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||||| |||||||| ||||||||||||| |  ||| ||||| |||||||||||| || ||||| ||||||| ||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  224 tctct 228  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || ||| |||| ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  224 tctct 228  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||||||| |||  |||||||| |||||||| | |  |||||||||||||||||||||||||| ||| ||||||||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  224 tctct 228  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 24307626 - 24307692
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctga 189  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  24307626 aaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 16056504 - 16056399
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||  |||| ||| |||||||||| || |||||||||||||||||||||| || | || |||||||| ||||||| |||||    
T  16056504 aaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 16056405  T
Q  223 ttctct 228  Q
    ||||||    
T  16056404 ttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| |||| ||||||||||||||||||| || ||| |||||||||||||||||| || | || ||||| || ||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  225 ctct 228  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 9122196 - 9122287
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    ||||||||||||||||||| ||||||||||||||||          ||||||||||||||||||| |||||||| |||| || |||||||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaataca----------cccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttct 9122285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 17443824 - 17443927
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||||||||||||  |||||||| |||||||    ||||||| ||||||||||||||||| |||||||  |||||||  |||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  225 ctct 228  Q
    ||||    
T  17443924 ctct 17443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 30479574 - 30479472
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||| |||||||||||||||| || || ||| ||||| |||||||||||| || |  | |||||||  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  226 tct 228  Q
    |||    
T  30479474 tct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 20075034 - 20074940
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||  ||||||||||||||||  | || ||||||||| |||||| |||||||        ||||||| ||||||||||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacg--------tggaccctgcacaagcacactttc 20074943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 14055692 - 14055610
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggaccc 208  Q
    |||| ||||||||| ||||| |||||||| |||||||  | || ||| |||||||||||||| ||| |||||||| |||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggaccc 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 30183975 - 30183895
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggac 206  Q
    ||||||||||||||| |||  |||| |||||||||||| | |  |||| || |||||||||||| ||||| ||| ||||||    
T  30183975 gagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctgatacgtaatcatatggac 30183895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 42044470 - 42044365
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42044470 aaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 42044371  T
Q  223 ttctct 228  Q
    ||||||    
T  42044370 ttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 50052531 - 50052426
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||  |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  50052531 aaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 50052432  T
Q  223 ttctct 228  Q
    ||||||    
T  50052431 ttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||| ||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  224 tctct 228  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| || || ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  226 tct 228  Q
    |||    
T  11511462 tct 11511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 480550 - 480445
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| |||||||| ||||||| || || ||||||||||||||||||||||||||||||| ||||||| | |||||||||||    
T  480550 aaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 480451  T
Q  223 ttctct 228  Q
    ||||||    
T  480450 ttctct 480445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| || || |||||||||||||||||||||| |||||||| |||| || ||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  226 tct 228  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| |  || ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  226 tct 228  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| |||||||||||||||| |  || ||| |||||||||||||| |||||||||||| |||||||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  223 ttctct 228  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 29977883 - 29977987
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||||||| | |  | |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  224 tctct 228  Q
    |||||    
T  29977983 tctct 29977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 29234346 - 29234243
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||| ||||| |||||||||| || || | |||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  225 ctct 228  Q
    ||||    
T  29234246 ctct 29234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||||||  |||||||||||||||  | || ||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  226 tct 228  Q
    |||    
T  3481754 tct 3481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||||| |||||||| ||||||| |  || |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||| |||||||  | || ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  226 tct 228  Q
    |||    
T  31910292 tct 31910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 41823918 - 41823984
Alignment:
Q  162 atccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41823918 atcctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 24995209 - 24995105
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||| || ||||| ||||| |||||||||| || || ||||||||| |||||| |||||||||||||| ||||||| ||||||||||| ||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  224 tctct 228  Q
    |||||    
T  24995109 tctct 24995105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| ||||||||||||||||||||| || || ||||||| |||||||||||||| || | || |||||||| ||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  224 tctct 228  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| |||| ||||||||||||||||||| || ||| |||||||||||||||||| || | || |||||||| ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  225 ctct 228  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| |||||||||||||| |||||| || || |||||||||||||||||||||| || |||| ||| |||| ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  225 ctct 228  Q
    ||||    
T  50813893 ctct 50813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 19670819 - 19670714
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||| |||||||||||||||| || || |||| ||||||||||||||||| || | || |||||||| ||||||| |||||    
T  19670819 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 19670720  T
Q  223 ttctct 228  Q
    ||||||    
T  19670719 ttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 53352660 - 53352564
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||| |||||||| |||||||| | |||||||| |||||||||||||||||||||| |  ||||||| ||||||||| |||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctct 53352564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 23608233 - 23608337
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||| |||||||| ||||| || ||||||| |  || ||||||||||||||||||||||||||||||| || || |  |||||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  224 tctct 228  Q
    |||||    
T  23608333 tctct 23608337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||   ||||||||||||||| || || ||||||||||||||||||||||||| ||||| ||||  | |||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  226 t 226  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 40574772 - 40574881
Alignment:
Q  119 tatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagca 218  Q
    |||||| |||| ||||||||||||||  ||||||||| |||||| || || ||||||||||||||||||||||||  |  ||||||| || | |||||||    
T  40574772 tatcaatgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagca 40574871  T
Q  219 cactttctct 228  Q
    ||||||||||    
T  40574872 cactttctct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||  |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  224 tctct 228  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 17983822 - 17983741
Alignment:
Q  147 cttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| |||||||||||    
T  17983822 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||  ||||||||||||||||||| || |||||||||||||||||||||| || | || ||||| || ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  224 t 224  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| ||||| ||||||||||||||| || || ||| |||||||||||||||||| || |||| || |||||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaataca-cccttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  225 ctct 228  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||  ||||||||||||||||||| || ||||| ||| |||||||||||| || | || |||||||| ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  226 tct 228  Q
    |||    
T  8343163 tct 8343161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 28480369 - 28480267
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| || |||||||||||  |||||||| |||||||    ||||||| ||||||||||||||||| |||||||  |||||||  ||||| ||||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  225 ctc 227  Q
    |||    
T  28480269 ctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 28481244 - 28481142
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| || |||||||||||  |||||||| |||||||    ||||||| ||||||||||||||||| |||||||  |||||||  ||||| ||||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  225 ctc 227  Q
    |||    
T  28481144 ctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 28482119 - 28482017
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| || |||||||||||  |||||||| |||||||    ||||||| ||||||||||||||||| |||||||  |||||||  ||||| ||||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  225 ctc 227  Q
    |||    
T  28482019 ctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 48647828 - 48647724
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||| ||||| |||  |||||||  ||||||| |  |||||||||||| |||||||| |||||| ||||| ||||| | ||||||||||| ||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatt 48647729  T
Q  224 tctct 228  Q
    |||||    
T  48647728 tctct 48647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 55079814 - 55079711
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatgga-cccagcacaagcacacttt 224  Q
    |||| |||||||||| |||| |||||||||||||||| |  || ||||||| |||||||||||||| || | || ||||| |||  |||||| |||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  225 ctct 228  Q
    ||||    
T  55079714 ctct 55079711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 47104542 - 47104646
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||| ||||||| |||||| || |||||||  |  | |||||||||||||||| |||||||| ||   || |||||  ||||| |||||||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactt 47104641  T
Q  224 tctct 228  Q
    |||||    
T  47104642 tctct 47104646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 29589831 - 29589738
Alignment:
Q  134 atacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||| |||| ||||| || ||||||| || || |||||||||||||||||||| | || | || ||||||||  |||||| |||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctct 29589738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  225 ctct 228  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| ||||||||||||||||  | || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  224 tctct 228  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  225 ctct 228  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 32951592 - 32951491
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    ||||||||||||||||||||||||| || |||||||||| |||||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  227 ct 228  Q
    ||    
T  32951492 ct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 38837214 - 38837319
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| |||||||||||||||| || |  ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  38837214 aaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38837313  T
Q  223 ttctct 228  Q
    ||||||    
T  38837314 ttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||||||||||| || || ||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  224 tctct 228  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 3783998 - 3784097
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||| ||| ||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  226 tct 228  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||||||||||||||||||||  | || | ||||||||||||||||||||||||||||| |||| || | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  223 ttctct 228  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||  |||||||||||||||| || || ||||||||||||||| ||||||||||||||| |||| || |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  225 ctct 228  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||  |||||||||||||||| |  || |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  226 tct 228  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||| |||||||| |||||||||||||||| || || |||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  226 tct 228  Q
    |||    
T  35137633 tct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||| |||||||||| |  || |||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  226 tct 228  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||  |||||||| ||||||| |  || ||||||||||||||||||||||||||||||| |||| || ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  224 tctct 228  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| ||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||| |||||| || ||||| ||||||| ||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  224 tctct 228  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcaca 220  Q
    |||| ||||||||||||||  |||||||||||| ||| || |||||||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||| |||||||||||||||| || || ||| |||||||||||||||||| |||| || |||||||| ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  224 tctct 228  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 3694370 - 3694469
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||| ||| |||| |||||||| ||||||| |  |||||||||||||||||||||||||||||||||  |||| || |||||||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 8238212 - 8238315
Alignment:
Q  126 gagtaatgatacatagacactct-taggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||| |||||||||| |||| || |||||||||||||| || || |||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacacttt 8238311  T
Q  225 ctct 228  Q
    ||||    
T  8238312 ctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||||| | ||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| || | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  225 ctct 228  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 35522881 - 35522978
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||  |||| ||||||||||| |  |||||||||||||||||||||||||||| | || ||||| || |||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| ||   || |||||||| ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  225 ctct 228  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 41915740 - 41915843
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| |||| |||||||||||||||| || || ||||| |||||||||||||||| || | || |||||||| ||||||| |||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  225 ctct 228  Q
    ||||    
T  41915840 ctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||| ||||||| || || |||| ||||||||||| |||||||||| |||||| |||| ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  226 tct 228  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 11044185 - 11044280
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||||          ||||||||||||||| ||||||| ||||||| |||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacact 11044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| ||| ||||||||||||||||| || || |||||||||||||||||||||| || |  | |||||||| ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  226 tct 228  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 10343674 - 10343597
Alignment:
Q  115 cttttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacac 192  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||    || |||||||||||||||||||||||    
T  10343674 cttttaccaaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 40846213 - 40846111
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||  |||||||||||||||| || || ||| |||||||||||||| ||| ||||| | |||||||| ||||||  ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  226 tct 228  Q
    |||    
T  40846113 tct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 18207177 - 18207281
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| ||||||||||||||  |||||||||||||||| |  || ||||||| |||||||||| |||||| | ||| || ||||  ||||||||||||    
T  18207177 aaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacact 18207275  T
Q  223 ttctct 228  Q
    ||||||    
T  18207276 ttctct 18207281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 7727903 - 7728006
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||| ||||||||| |||||| |  || |||  |||| |||||||||||| || |||| |||||||| ||||||| |||||    
T  7727903 aaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacact 7728002  T
Q  223 ttct 226  Q
    ||||    
T  7728003 ttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||||||||||||  |||||||| ||||| | || |||||| ||||| |||||||||| |||| | || |||||||| |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  225 ctct 228  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 35468958 - 35468853
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||  ||||| ||||||||||||  || ||||||||| |||||||| | | ||   ||  ||||||| |||||| ||||||    
T  35468958 aaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacact 35468859  T
Q  223 ttctct 228  Q
    ||||||    
T  35468858 ttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 31735884 - 31735979
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  ||||||||||||||||  | |||||||||||||||       |||||| | |||||||| || ||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcacactttc 31735976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 45223039 - 45223111
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgta 195  Q
    |||||||||||||| ||| |||  ||||||||||||||||| | | |||| | ||||||||||||||||||||    
T  45223039 aaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgta 45223111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 39256023 - 39255922
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| |  || | ||||| ||||||||||||||||| | ||| ||||| |  |||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttc 39255925  T
Q  226 tct 228  Q
    |||    
T  39255924 tct 39255922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  156 caatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||| || ||| ||||||||||||||||||||| ||||| |||| |   ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 42973045 - 42972977
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgt 194  Q
    |||||||||||||||  ||  || || ||||||||||| ||||| |||||||||||||| ||||||||||    
T  42973045 agagtaatgatacatgtactatcctatgtggcaataca-ccatttacacccacacaaaattctgacacgt 42972977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 32045838 - 32045906
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgta 195  Q
    |||||||||||||| | | ||||||||||||||| ||   |  ||||||||| ||||||||||||||||    
T  32045838 agtaatgatacatatatattcttaggtggcaatatattactggacacccacataaaaatctgacacgta 32045906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  223 ttct 226  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| ||||||||||||||  |||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  223 ttctct 228  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  226 tct 228  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||||||||||| |  |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  224 t 224  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 50630457 - 50630560
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||| || ||||||||||||||||||| ||   ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  225 ctct 228  Q
    ||||    
T  50630557 ctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||||| ||||||| | |||||||||| || ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  226 tct 228  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 3000319 - 3000421
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||| |||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  226 tct 228  Q
    |||    
T  3000419 tct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 8346491 - 8346386
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||| |||  ||||||||||||||| |  || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  8346491 aaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacact 8346392  T
Q  223 ttctct 228  Q
    ||||||    
T  8346391 ttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 38595151 - 38595256
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    |||||||||||||||||| ||||  ||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| | |||||||||||    
T  38595151 aaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 38595250  T
Q  223 ttctct 228  Q
    ||||||    
T  38595251 ttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||  |||||||||||||||| |  || |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  226 tct 228  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||||||| |||||| || || |||||||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  226 tct 228  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||||| |||||||||||||||| |  || ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||   ||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  225 ct 226  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 41758804 - 41758907
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||||||  |||  |||||||||| || || ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  225 ctct 228  Q
    ||||    
T  41758904 ctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 44548473 - 44548374
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||||   ||||||||||||||| |  || | ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  226 tct 228  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 5959103 - 5958998
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||| |||| ||||||||||| |  || |||||||||||||||||||||| || |||| |||||||| ||||||| |||||    
T  5959103 aaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacact 5959004  T
Q  223 ttctct 228  Q
    ||||||    
T  5959003 ttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 26274430 - 26274530
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||| ||||||||||||||||| |||| |||||||||||||  || ||| ||||| ||||||||||||| ||||||| |||| || ||||||| ||||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactt 26274529  T
Q  224 t 224  Q
    |    
T  26274530 t 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 11152476 - 11152378
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    |||||||| |||||||||| |||||||||||||||| || |  ||| ||||||||||||||||||||||||||  | ||||| |||||||||| ||||||    
T  11152476 agtaatgaaacatagacac-cttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 26440741 - 26440836
Alignment:
Q  133 gatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||| |||||||  ||||| || ||||||| || |||||||||||||||||||||||||||| | |||||||| || ||| |||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 37649198 - 37649297
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||   |||||||||||||||  | || ||||||||||||||||||||||||| ||||| || |  | ||||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||||| |   |||||||||||||||||  |||||||||||| ||||||||||||||| | |||||||| || | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  225 ctct 228  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 3302633 - 3302533
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||| |||  |||||||| ||||| || | |  |||||||||||||||||||||||||| ||| ||||||||   ||||||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  226 t 226  Q
    |    
T  3302533 t 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||| |||||||  |||||||| ||||||| |  || ||| ||||||||||||||||||||||| || || ||| | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  224 tctct 228  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 44334250 - 44334175
Alignment:
Q  146 tcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacac 221  Q
    |||| ||||| ||||||  |||| ||| ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  44334250 tctttggtggtaatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||  |||||||||||||||| || || |||| ||||||||||||||||| || | || |||||||| | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  226 tct 228  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 45044639 - 45044558
Alignment:
Q  147 cttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||||||||| |  || ||||||| |||||||||||||| |||| ||||||||||| |||||| |||| |||||||    
T  45044639 cttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctct 45044558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 13414791 - 13414863
Alignment:
Q  156 caatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||| || || |||||||||||||||||| |||||||||||| |||||||  |||||||||| |||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctct 13414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 23597194 - 23597093
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||   |||||||||||||||  | || | ||||||| ||||||||||||||| | ||| | ||||  |||||| ||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacact 23597095  T
Q  223 tt 224  Q
    ||    
T  23597094 tt 23597093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 44453984 - 44454077
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||  ||| |||||||||||||  || | |||||||||||||||||||| || || || |||| ||  ||||||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 47748443 - 47748544
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| | || |||||||||||||||| || || ||||||| | |||||||||||| || | || ||||| || ||||||| | ||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaataca-cccttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttc 47748541  T
Q  226 tct 228  Q
    |||    
T  47748542 tct 47748544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 7740732 - 7740801
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgt 194  Q
    ||||| ||||||||| ||||  |||| ||| ||||||||||||| ||||| ||| |||||| ||||||||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgt 7740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 750239 - 750294
Alignment:
Q  152 gtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggaccc 208  Q
    ||||||||||| || ||| ||||||||||||| |||||||||| || ||||||||||    
T  750239 gtggcaatacacccttta-cacccacacaaaattctgacacgtggtaacatggaccc 750294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 48489348 - 48489400
Alignment:
Q  174 ccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    |||||||||||||||||| || ||||| |||| || ||||||||||| |||||    
T  48489348 ccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  226 tct 228  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 13811649 - 13811754
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||| ||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13811649 aaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 13811748  T
Q  223 ttctct 228  Q
    ||||||    
T  13811749 ttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 18520987 - 18520882
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||| ||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  18520987 aaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 18520888  T
Q  223 ttctct 228  Q
    ||||||    
T  18520887 ttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  226 t 226  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| ||||||| |||||||| || || ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  224 tctct 228  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||  |||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  225 ctct 228  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  226 tct 228  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||||||| |||||| || || |||||||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  226 tct 228  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| ||||||||||||||  |||||||| |||||||| | || ||||||||||||||||||||||||||| ||||||||||| |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  224 tctct 228  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| |  || |||||||||||||||||||||||||||| || |||| || |||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  226 tct 228  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||| || |||| ||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  226 tct 228  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 42414402 - 42414304
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||   |||||||||||||| || || ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 3921369 - 3921263
Alignment:
Q  122 caaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacac 221  Q
    |||||||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| ||||    
T  3921369 caaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 3921270  T
Q  222 tttctct 228  Q
    |||||||    
T  3921269 tttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| || |||||||| ||| ||||||||||||||| | |||||||| || ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  226 tct 228  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| || |||||||| ||| ||||||||||||||| | |||||||| || ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  226 tct 228  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||||||||||||   ||||||||||||||| |  || ||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  225 ctct 228  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 31008985 - 31009088
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||  |||||||| |||||||| | |  ||||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  31008985 aaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 31009084  T
Q  223 ttct 226  Q
    ||||    
T  31009085 ttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| |||||||||| |||  |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  225 ctct 228  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 38296200 - 38296304
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||||||  ||||||||| ||||||| |  |||| ||||||||||||||| |||||||||  || |||| ||| ||||||||||||    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T
Q  223 ttctc 227  Q
    |||||    
T  38296300 ttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||| |||| |||||||||||||| || |||||||||||||||||||| | || |||| ||| |||| ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  224 tctct 228  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagc 217  Q
    |||||||| ||||||||||||  |||||||||||||||||| |||| |  || | ||||||||||||||||||||| ||||||| ||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 6260101 - 6259999
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||| |||  | |||||| ||||||| || ||||||||||| ||||||||| |||| | ||||||||||||   || ||||||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  226 tct 228  Q
    |||    
T  6260001 tct 6259999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 33825424 - 33825322
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||| |||||||| |||||||||||||||||  | || ||||||||| |||||||||||||||  |||  || |||   |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  226 tct 228  Q
    |||    
T  33825324 tct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaat 185  Q
    ||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 9603811 - 9603915
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||||||| |||  ||||||||  ||||||  |||| ||||| ||||||||||||||||| | |||| ||||||||   |||| |||||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactt 9603910  T
Q  224 tctct 228  Q
    |||||    
T  9603911 tctct 9603915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacat-ccattaacacccacacaaaaatctga 189  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 16327922 - 16327969
Alignment:
Q  147 cttaggtggcaatacatccattaacacccacacaaaaatctgacacgt 194  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  16327922 cttaggtggcaatacatccattgacacccacataaaaatctgacacgt 16327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 39557594 - 39557515
Alignment:
Q  149 taggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||| |||||| |  |||||| |||||||||||||||||||||  ||||||||||||   |||| ||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 31132392 - 31132442
Alignment:
Q  174 ccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||| |||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatacttt 31132442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 21370048 - 21370106
Alignment:
Q  170 acacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||| ||||||||||||| || ||||| ||||||| |||||| |||| |||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctct 21370106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||| |||||||   |||| || ||||||| || || |||| |||| ||||||||  |||||   ||| ||||||| ||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  226 t 226  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  226 tct 228  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||| |||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  226 tct 228  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 49607411 - 49607516
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||  ||||||||||||    
T  49607411 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacact 49607510  T
Q  223 ttctct 228  Q
    ||||||    
T  49607511 ttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||||||  ||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  225 ctct 228  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  226 tct 228  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 52629305 - 52629402
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    ||||||||||||||||||||||  |||||||| |||||| || || ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  224 tctct 228  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||||||||||| |  || |||||||||||||||||||||||||||| || ||||||| |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  224 tctct 228  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 8076393 - 8076495
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||| |||| ||||||||||| |||| || || |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  226 tct 228  Q
    |||    
T  8076493 tct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 31456690 - 31456791
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    ||||||||||||||||||| | |||| ||||||||| || || ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  227 ct 228  Q
    ||    
T  31456790 ct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  ||||| || |||||||||| |||||||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  226 tct 228  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 11095455 - 11095353
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||  | |||| ||| || |||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcac--gtaccccgcataaacacactt 11095358  T
Q  224 tctct 228  Q
    |||||    
T  11095357 tctct 11095353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 11348025 - 11347920
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| || ||| ||||||||||||||||||||| | ||||||||||| ||| |||||||||    
T  11348025 aaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacact 11347926  T
Q  223 ttctct 228  Q
    ||||||    
T  11347925 ttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||  ||||||||||||||||||  || ||||||||| |||||| |||||||| | ||||||||||| ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  224 tctct 228  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||| |||||||||  ||||||||| ||||||  | |||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  226 tct 228  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 48587187 - 48587089
Alignment:
Q  130 aatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||| || |||||||||||||||| || || ||||| ||| ||||||||||||||||||||| |||| || ||||||| |||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 26754700 - 26754797
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||| ||||||||| |||||||||||||||| || |  ||| |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| ||||||||||||||| |||||||| |||||||  | | ||||| ||||||||||||||||| || |||| |||||||| ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  224 tctct 228  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| ||||||||||||||| |||||||| ||||||| || || |||||||||||||||| |||||||||||||| |||| ||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  224 tctct 228  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||  |||||||||||||||| || || ||||||||| |||||||||||| ||  |||  ||||||   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  226 tct 228  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 30801829 - 30801731
Alignment:
Q  130 aatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||||||||| ||||||||  |||||| || || | |||||||||||||| ||||| ||||||| ||||||||  |||||||||| |||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctct 30801731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 36707527 - 36707453
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagt 197  Q
    |||||||||||||||||||| || |||||||| ||||||| || || ||| ||||||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagt 36707453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  ||||| |||||||||| |  |||||| |||||||| |||||||||||| | || ||| |||| ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  226 tct 228  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||  |||| |||||||||||||| || ||||||||| |||||| ||||||||  |||  ||||||   |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  225 ctct 228  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 9562998 - 9563101
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||| ||||  |||| || ||||||| || || ||| ||| | ||||||||||||||||||||| |||| || |||||| ||||||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T
Q  225 ctct 228  Q
    ||||    
T  9563098 ctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||  ||||| |||||||||| |  || ||||||||| ||||||||| ||||| | ||| ||||||| | |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  225 ctct 228  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 48375807 - 48375704
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||| ||||||||| |||||||| ||||||| || | || | ||| |||||||||||||  || ||||||||||||| ||||||||||| |||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacatttt 48375708  T
Q  225 ctct 228  Q
    ||||    
T  48375707 ctct 48375704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 13898154 - 13898053
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    |||||||||| ||| |||  |||||||||||||||| || || ||||||||| |||||||||||||||  |||  ||||||   ||||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  227 ct 228  Q
    ||    
T  13898054 ct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  148 ttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||||| || || || |||||||||||||||||||||| || | || |||||||| ||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||  |||| ||||||||||| |  || ||||||||| |||||| |||||||| ||||  ||||||   |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  225 ctct 228  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||| |||||||||||||||| || || ||||||||| |||||||||||| ||   || |||||||| ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaataca-cccttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  226 tct 228  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgt 194  Q
    ||||||||||||||||| |||  |||| |||  ||||||||| || ||||||||| |||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 21746284 - 21746212
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaaca--cccacacaaaaatctgacacgta 195  Q
    |||||||||||||||| |||  ||||||||||||||||| | |  |||  |||||||||||||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgta 21746212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 25395428 - 25395368
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgaca 191  Q
    |||||||||| |||  |||| ||||| |||||||| |||| ||||||||||||||||||||    
T  25395428 atgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgaca 25395368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 41080700 - 41080809
Alignment:
Q  117 tttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaag 216  Q
    |||| ||| |||||||||||||||||||  |||| || |||| ||| || || |||||||| ||||||||||| | || ||||  |||||||| ||||||    
T  41080700 tttaacaacgagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccca-cacaag 41080797  T
Q  217 cacactttctct 228  Q
    |||| |||||||    
T  41080798 cacattttctct 41080809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 25407245 - 25407145
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaa-tctgacacgtagtcacatggacccagcacaagcacactttctc 227  Q
    |||||||||||| |||  | |||||||||||| | || || |||| |||||||||| ||||||||||  ||| ||||| ||  ||||| |||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  228 t 228  Q
    |    
T  25407145 t 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  226 tct 228  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 33436208 - 33436098
Alignment:
Q  118 ttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagc 217  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| || || |||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  33436208 ttataaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagc 33436109  T
Q  218 acactttctct 228  Q
    |||||||||||    
T  33436108 acactttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  224 tctct 228  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||| |||| || |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  225 ctct 228  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 28863458 - 28863557
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 38273245 - 38273140
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  38273245 aaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacact 38273146  T
Q  223 ttctct 228  Q
    ||||||    
T  38273145 ttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||| ||||||| |  || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  224 tctct 228  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||| ||||| |||||||||| || || ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  225 ctct 228  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||| |||||||||| || || ||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  226 tct 228  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| |  |  ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  226 tct 228  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||||||||||||||||||| |||||||| ||||||| |  || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  225 ct 226  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||||||||||||||||||| |||||||||||||||| || || || |||||| ||||||||||||||||||||| ||||||| | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  224 tctct 228  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||  |||||||||||||||| || || ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  226 tct 228  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||||||||||| |  || |||||||||||||||||||||||||||| || ||||||| |||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  226 tct 228  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 19930917 - 19930818
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||||| |||||||||||||||| || || ||| ||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||| ||||||||||| || || ||| |||||||||||||||||||||| |||| ||||||| ||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  226 tct 228  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 20700812 - 20700917
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||  |||| ||||||||||| || || || || ||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  20700812 aaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 20700911  T
Q  223 ttctct 228  Q
    ||||||    
T  20700912 ttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 42257190 - 42257295
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| ||||||||||||||   |||||||||||||||||  || ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||    
T  42257190 aaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacact 42257289  T
Q  223 ttctct 228  Q
    ||||||    
T  42257290 ttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||||||||||||  |||| |||||||||||||| || ||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||||||||||||  ||||| || |||||||||| ||||| ||||||||||||| |||||||| | ||||||||||| ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  225 ctct 228  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||| |||| ||| |||||||||| || |||||||||||||||||||||| || |||| |||||||| ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  226 tct 228  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 38882916 - 38882809
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatgga---cccagcacaagcac 219  Q
    ||||||||||||||||||||||| |||||||||||||| | || || ||| ||||||||||||||||||||||||||| ||||   ||| |||||||| |    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgc 38882818  T
Q  220 actttctct 228  Q
    |||||||||    
T  38882817 actttctct 38882809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 45097838 - 45097733
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||| |||  ||||||||||||||||||| || ||||||| |||||||||||||| || | || |||||||| ||||||| |||||    
T  45097838 aaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacact 45097739  T
Q  223 ttctct 228  Q
    ||||||    
T  45097738 ttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| |||||||| ||||||| |  || ||| |||||||||||||||||||||||| || |||| || ||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  226 t 226  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 26891607 - 26891502
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| ||||||||||| ||| |||||||||||||||| || |  |||||||||||||||||||||| || ||||| ||||||  | ||||||||| |    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  223 ttctct 228  Q
    ||||||    
T  26891507 ttctct 26891502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 17823782 - 17823853
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgta 195  Q
    ||||||||||||||||| |||  ||||||||||||||||| | | |||||||||||||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgta 17823853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    |||| |||||||||| |||| |||||||| ||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 2997566 - 2997485
Alignment:
Q  147 cttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| |||||||||||    
T  2997566 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 33436199 - 33436313
Alignment:
Q  114 tcttttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcac 213  Q
    |||||||| | ||||||||||||||||||||  ||||| |||||||||| |  || ||||||||| |||||||||||||||   ||  |||||   ||||    
T  33436199 tcttttataatagagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcac 33436298  T
Q  214 aagcacactttctct 228  Q
    |||||||||||||||    
T  33436299 aagcacactttctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 17820104 - 17820002
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| ||||||||||||||    |||||||||||||| || || |||||||||||||||||||||| || || || |||||||  ||||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  226 tct 228  Q
    |||    
T  17820004 tct 17820002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 3439985 - 3440081
Alignment:
Q  132 tgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||| ||||||| ||||||||||||||||  | |  |||||||||||||||||| ||| ||  | || ||||||| ||||||||||| |||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctct 3440081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 13365348 - 13365455
Alignment:
Q  123 aaagagtaatgatacatagacactc--ttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcaca 220  Q
    ||||||| |||||||||| |||| |  |||| |||||||| | || || |||||||||||||||||||||| ||   || |||||||| ||||||| |||    
T  13365348 aaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtaca 13365447  T
Q  221 ctttctct 228  Q
    ||||||||    
T  13365448 ctttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 3737987 - 3738043
Alignment:
Q  170 acacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttct 226  Q
    |||||||||||||||||||||| || ||||  ||||||| ||||||||||| |||||    
T  3737987 acacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 15428842 - 15428775
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgaca 191  Q
    |||||| |||||||||| |||  |||| ||||| ||||| || ||||||| |||||||||||||||||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgaca 15428775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 41575138 - 41575240
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatgga-cccagcacaagcacactttc 225  Q
    ||||||||||||||||||  ||||| ||| |||||| || || |||  ||||||||||| ||||| || ||||  |||| |||  |||||||||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  226 tct 228  Q
    |||    
T  41575238 tct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  176 acacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||||||||||| || |||| |||||||| ||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  176 acacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||||||| |||||||||| || || ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 11427615 - 11427720
Alignment:
Q  125 agagtaatgatacatagacac--tcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    |||||||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  223 ttctct 228  Q
    ||||||    
T  11427715 ttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  226 tct 228  Q
    |||    
T  17598654 tct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 32869678 - 32869780
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||||| ||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  226 tct 228  Q
    |||    
T  32869778 tct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 22880755 - 22880656
Alignment:
Q  129 taatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||||| |||||||||||||||| || || |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacacttt 224  Q
    ||||| ||||||||||||||  |||||||||||||| | || |||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  225 ctct 228  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||||||||||||||||||| ||||||||||||||||    || |||| |||||||||||||| ||||||||||| ||||||| |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  223 ttctct 228  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||||||  |||| |||||||||| |  ||||||||||||||||||||||||||||||| || |||| || ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  226 tct 228  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 30341464 - 30341358
Alignment:
Q  122 caaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacac 221  Q
    |||||||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| ||||    
T  30341464 caaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 30341365  T
Q  222 tttctct 228  Q
    |||||||    
T  30341364 tttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  124 aagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactt 223  Q
    |||||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  224 tctct 228  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 31110867 - 31110759
Alignment:
Q  118 ttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagc 217  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||| || || |||| ||||  |||||||||||||||  ||||||||||| ||||||||    
T  31110867 ttataaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagc 31110770  T
Q  218 acactttctct 228  Q
    |||||||||||    
T  31110769 acactttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    |||| |||||||||| |||| |||||||||||||||| || || |||||||||||||||||||||| || | || |||||||| ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  226 tct 228  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 31109500 - 31109398
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||  |||||||| |||||||||||||||| || || ||| ||||||||||||||||||||||||||| | ||||| ||| ||| ||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttc 31109401  T
Q  226 tct 228  Q
    |||    
T  31109400 tct 31109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 23128230 - 23128125
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||| |||||||| ||||||||  ||| |||  ||||||||| || ||||||||||||||||||||||||||||||| |||| ||  ||||||||||||    
T  23128230 aaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacact 23128131  T
Q  223 ttctct 228  Q
    ||||||    
T  23128130 ttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 15832574 - 15832679
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    |||||||||||||||||||||||  ||||||| ||||| |||  || |||||||||||||||| |||||||||||||| |||| || ||||||  ||| |    
T  15832574 aaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacatt 15832673  T
Q  223 ttctct 228  Q
    ||||||    
T  15832674 ttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 12732479 - 12732550
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgt 194  Q
    |||||||||||||||||||||| ||||| ||||||||| |  |||| |||||||||||||||||||||||||    
T  12732479 aaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgt 12732550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 28536582 - 28536486
Alignment:
Q  130 aatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||| |||  |||||||||||||||| || || ||||||||||||||||||||||||  ||||  |||||||  ||||||||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 4231570 - 4231650
Alignment:
Q  148 ttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||||||||||||| || ||  |||||||||||||||||||||||| | || |||||||| ||||||| |||||||||||    
T  4231570 ttaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||| |||||||  |||||||||||||||| || || ||||||||| |||||||||||| ||  |||  ||||||   ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  226 tct 228  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 9379807 - 9379744
Alignment:
Q  131 atgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgt 194  Q
    ||||||||||||||  ||||| || |||||||||| || ||||||| |||||||| ||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgt 9379744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 30870057 - 30870116
Alignment:
Q  169 aacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||||||| | |||||||| ||| || ||||||||||||| ||||||||||| |||||||    
T  30870057 aacacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctct 30870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  125 agagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgaca 191  Q
    ||||||||||||||||||||  |||||||||||||| |||  || |||| || |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 946377 - 946450
Alignment:
Q  127 agtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcac 200  Q
    ||||| ||||||||||||  ||||||||  |||||| || || ||||| || |||||||||||||| |||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcac 946450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 10212 - 10107
Alignment:
Q  123 aaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacact 222  Q
    ||||||| |||||||||||||||  |||||||||||||||||| || ||| ||||| ||||||||||||||||||||| ||||||  | |||||||||||    
T  10212 aaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacact 10113  T
Q  223 ttctct 228  Q
    ||||||    
T  10112 ttctct 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 1038 - 927
Alignment:
Q  117 tttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaag 216  Q
    ||||| || |||||||||||||||||||   ||||||||||||||| || |||||| ||||||||||| ||||||||||||||| || | || |||||||    
T  1038 tttattaatgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaag 939  T
Q  217 cacactttctct 228  Q
    ||||||||||||    
T  938 cacactttctct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 1038 - 927
Alignment:
Q  117 tttatcaaagagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaag 216  Q
    ||||| || |||||||||||||||||||   ||||||||||||||| || |||||| ||||||||||| ||||||||||||||| || | || |||||||    
T  1038 tttattaatgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaag 939  T
Q  217 cacactttctct 228  Q
    ||||||||||||    
T  938 cacactttctct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  126 gagtaatgatacatagacactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttc 225  Q
    ||||||||||||||||||||  |||| |||||||||| |  ||||||||||||||||||||||||||||||| || |||| || ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  226 tct 228  Q
    |||    
T  4129 tct 4131  T

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Target: scaffold0316 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 17077 - 17156
Alignment:
Q  149 taggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    ||||| ||||||||||| |  ||| |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 152514 - 152600
Alignment:
Q  142 acactcttaggtggcaatacatccattaacacccacacaaaaatctgacacgtagtcacatggacccagcacaagcacactttctct 228  Q
    |||| ||| |||||||||||| || || |||||||||||||||||||||| || |||| ||||| || ||||||  |||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

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