View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13173_high_47 (Length: 209)

Name: NF13173_high_47
Description: NF13173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13173_high_47
NF13173_high_47
[»] chr5 (17 HSPs)
chr5 (16-191)||(8388098-8388273)
chr5 (16-190)||(26597457-26597631)
chr5 (16-190)||(20204968-20205142)
chr5 (16-190)||(25730821-25730995)
chr5 (17-190)||(4268112-4268285)
chr5 (16-191)||(15988749-15988924)
chr5 (16-189)||(27532906-27533079)
chr5 (28-190)||(22767269-22767431)
chr5 (16-190)||(34652254-34652428)
chr5 (17-179)||(27292458-27292620)
chr5 (11-189)||(41940732-41940909)
chr5 (16-190)||(12660329-12660503)
chr5 (40-189)||(11375537-11375686)
chr5 (26-108)||(30222848-30222930)
chr5 (98-190)||(37448138-37448230)
chr5 (16-85)||(23074950-23075019)
chr5 (16-111)||(32632607-32632702)
[»] chr7 (15 HSPs)
chr7 (16-190)||(22289254-22289428)
chr7 (16-190)||(16731946-16732120)
chr7 (16-190)||(17710080-17710254)
chr7 (16-191)||(29200955-29201130)
chr7 (16-191)||(30493610-30493784)
chr7 (16-189)||(9328602-9328775)
chr7 (17-191)||(16098502-16098676)
chr7 (16-169)||(3275068-3275221)
chr7 (16-111)||(3601744-3601839)
chr7 (31-110)||(44480893-44480972)
chr7 (13-89)||(24139145-24139221)
chr7 (26-171)||(1581648-1581793)
chr7 (98-189)||(30824557-30824646)
chr7 (16-189)||(17877422-17877585)
chr7 (16-81)||(30824494-30824559)
[»] chr1 (14 HSPs)
chr1 (16-190)||(48949724-48949898)
chr1 (16-190)||(51113328-51113502)
chr1 (17-191)||(44527265-44527439)
chr1 (16-190)||(25682664-25682838)
chr1 (16-191)||(5609351-5609526)
chr1 (16-191)||(44602764-44602939)
chr1 (16-189)||(36733710-36733883)
chr1 (16-190)||(4395172-4395345)
chr1 (16-190)||(16816797-16816973)
chr1 (16-111)||(2885315-2885410)
chr1 (30-190)||(48166250-48166410)
chr1 (17-178)||(52109479-52109639)
chr1 (16-89)||(21031263-21031336)
chr1 (16-121)||(24538569-24538674)
[»] chr4 (20 HSPs)
chr4 (16-190)||(51259529-51259704)
chr4 (16-190)||(37245852-37246026)
chr4 (16-190)||(56065642-56065820)
chr4 (16-190)||(29655666-29655840)
chr4 (16-190)||(41835311-41835485)
chr4 (16-190)||(49951326-49951500)
chr4 (16-190)||(51734972-51735145)
chr4 (16-190)||(55735022-55735196)
chr4 (16-189)||(18442147-18442318)
chr4 (16-190)||(28426196-28426370)
chr4 (16-189)||(28537787-28537958)
chr4 (16-190)||(49119400-49119574)
chr4 (16-191)||(43840306-43840482)
chr4 (16-190)||(32577048-32577222)
chr4 (28-190)||(21321540-21321704)
chr4 (16-176)||(26422602-26422762)
chr4 (16-190)||(2064866-2065040)
chr4 (16-179)||(47226330-47226493)
chr4 (16-110)||(24989934-24990027)
chr4 (16-111)||(44936082-44936177)
[»] chr3 (16 HSPs)
chr3 (16-189)||(55199525-55199698)
chr3 (17-191)||(53497044-53497218)
chr3 (16-187)||(42340277-42340448)
chr3 (16-111)||(27608903-27608998)
chr3 (16-191)||(11020180-11020355)
chr3 (16-111)||(34497372-34497467)
chr3 (26-158)||(647173-647305)
chr3 (16-190)||(46007315-46007486)
chr3 (16-80)||(19117720-19117784)
chr3 (16-160)||(2121124-2121268)
chr3 (113-188)||(647308-647383)
chr3 (16-190)||(2615506-2615670)
chr3 (16-111)||(24176862-24176957)
chr3 (16-88)||(31341725-31341801)
chr3 (16-70)||(27747685-27747739)
chr3 (151-191)||(27941129-27941169)
[»] chr2 (16 HSPs)
chr2 (19-190)||(34695907-34696078)
chr2 (19-190)||(34718319-34718490)
chr2 (16-190)||(88572-88746)
chr2 (119-191)||(9709941-9710013)
chr2 (14-139)||(22845600-22845725)
chr2 (16-123)||(13109869-13109976)
chr2 (16-122)||(9710036-9710142)
chr2 (16-190)||(12130638-12130812)
chr2 (16-190)||(44017318-44017492)
chr2 (16-125)||(1417981-1418090)
chr2 (11-107)||(26198778-26198874)
chr2 (16-111)||(11292063-11292157)
chr2 (92-191)||(18345563-18345661)
chr2 (30-110)||(14827173-14827253)
chr2 (133-191)||(26198705-26198762)
chr2 (16-66)||(35158845-35158895)
[»] scaffold0446 (1 HSPs)
scaffold0446 (16-190)||(199-377)
[»] chr6 (11 HSPs)
chr6 (16-185)||(15605994-15606163)
chr6 (16-187)||(28107155-28107326)
chr6 (16-190)||(30801991-30802165)
chr6 (33-189)||(15053192-15053348)
chr6 (16-191)||(19690879-19691054)
chr6 (16-189)||(14680176-14680349)
chr6 (16-89)||(34104465-34104538)
chr6 (17-189)||(29368057-29368229)
chr6 (16-89)||(27443045-27443117)
chr6 (20-190)||(11731673-11731840)
chr6 (16-56)||(21944628-21944668)
[»] chr8 (13 HSPs)
chr8 (16-190)||(7127236-7127410)
chr8 (16-190)||(478056-478230)
chr8 (17-189)||(23853946-23854118)
chr8 (16-191)||(13415035-13415210)
chr8 (16-190)||(185591-185764)
chr8 (16-190)||(8451123-8451297)
chr8 (16-190)||(40588730-40588904)
chr8 (16-113)||(33642764-33642861)
chr8 (16-116)||(598237-598337)
chr8 (16-148)||(37712129-37712260)
chr8 (16-103)||(11870364-11870451)
chr8 (16-126)||(3606739-3606849)
chr8 (134-188)||(9496797-9496851)
[»] scaffold0003 (1 HSPs)
scaffold0003 (16-89)||(44244-44316)
[»] scaffold0922 (1 HSPs)
scaffold0922 (16-104)||(264-352)


Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 8388273 - 8388098
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  8388273 ataatactggaaacaatagcataaaattctgaatcaccatggcctggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggt 8388174  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8388173 cccatctgttcccaaccgcaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 8388098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 26597457 - 26597631
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  26597457 ataatactagaaacaataacataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggt 26597556  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    | ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26597557 ctcatctattcccaactgcaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaattgtcatatttg 26597631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 20205142 - 20204968
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||| |||||||||||| |||||||| ||||| ||||||||||||||||   |||||||||||||||||||  |||    
T  20205142 ataatactagaaacaatagcatagaattttgaatcaccatgacccggagaggatagagcttgcactagagtagatgagtcggactcgaagacaactcggt 20205043  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||||| ||||  ||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  20205042 tccatctgttcgcaacaacaaagtgaatggcctcgagtaaggctactgcctccccctccaatactgtcatatttg 20204968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 25730995 - 25730821
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||||| |||||||||| ||| |||||||||| ||||||||||||||||   |||||||||||||||||||   ||    
T  25730995 ataatactagaaacaataacatagaattcttaatcaccatgaccctgagacgatagagcttgcactagagtagatgagtcggactcgaagacaactcagt 25730896  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||| || | |||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25730895 cccatctgttcgcatcagcaaagtgaagggcctcgagtaaggctactgcctccccctccaaaactgtcatatttg 25730821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 4268285 - 4268112
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||   ||||||||||||||| |||| ||||    
T  4268285 taatactagaaacaatagcatagaattccgaatcaccatggcccggagatgatagagcttgcactagagtagatgagtcggactcgaagaaaacccggtc 4268186  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||| |||||  || | |||||||| | ||| || |||||||| |||||||||||||||||||||||||||||||    
T  4268185 ccacctgttagcatcagcaaagtgaagggcctctagtaaggctactgcctccccctccaaaactgtcatatttg 4268112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 15988749 - 15988924
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| ||||| |||||||||||||| | ||||||||| | |||||||||||||||  || |||||| |||||||||| |||    
T  15988749 ataatactagaaacaataacatagaattccgaatcaccatggcctgaagacgatagagattgcactagagtagctgagacggacttgaagacaacccggt 15988848  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    ||||| ||||| || | |||||||  | ||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  15988849 cccatatgttcgcatcagcaaagtaaagggcctcgagtaaggttactgcctccccctccaaaactgtcatatttgt 15988924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 27532906 - 27533079
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| | ||||||||||||||||| |||||||||||||  |  ||||||| || |||||||||||||||||| |||||| |||    
T  27532906 ataatacttgaaacaatagcaaagaattctgaatcaccatgacccggagacgataaagtctgcactaaagaagcaaagtcggactcgaaaacaacccggt 27533005  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    ||||||| ||| || | |||||||| ||| |||||| ||| || | ||||||||||||||||||||| ||||||    
T  27533006 cccatctattcacatcagcaaagtgaatgacatcgaataaagctattgcctccccctccaaaactgttatattt 27533079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 22767269 - 22767431
Alignment:
Q  28 acaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgttcc 127  Q
    ||||| ||||| |||||||||| |||||| ||||  |||||||| ||||||||||||||| || ||||  |||||||||||||| |||||||||||||      
T  22767269 acaatcgcatagaattctgaattaccatgtcccgctgacgatagagcttgcactagagtatcagagtcaaactcgaagacaacccggtcccatctgttta 22767368  T
Q  128 caaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    || | |||||||| || ||| |||||||||| |||||||||||||||||||| ||||||||||    
T  22767369 catcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatatttg 22767431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 34652254 - 34652428
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||   |||||| ||||||||||||| | |    
T  34652254 ataatactagaaacaataacatataattctgaatcaccatggcccagagacggtagagcttgcactagagtagtcgagtcgggctcgaagacaacccgat 34652353  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||| || | |||||||| ||||||||||||||||  | |  |||||| | ||| |||||||||||||    
T  34652354 cccatctgttcacatcggcaaagtgaatggcatcgagtaaggttattatctccccttacaacactgtcatatttg 34652428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 27292620 - 27292458
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| | ||||||||||| ||   ||||| |||||||||||||| ||||    
T  27292620 taatactagaaacaatagcataaaattccaaatcaccatggcctggagacgatagagtttgcactagagcagatgagtcgaactcgaagacaacccggtc 27292521  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaac 179  Q
    |||||||||  || | |||||||| | |||||| |||||||| | ||||||||||| ||||||    
T  27292520 ccatctgttatcatcagcaaagtgaagggcatctagtaaggctattgcctcccccttcaaaac 27292458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 41940732 - 41940909
Alignment:
Q  11 ggtagataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaac 110  Q
    |||| |||||||| |||||||||||||| ||||||||||||| |||| || |||||||||| | ||||||||||||||   |||||||||||||||||||    
T  41940732 ggtaaataatactagaaacaatagcatagaattctgaatcacaatggtccagagacgatagagtttgcactagagtagttgagtcggactcgaagacaac 41940831  T
Q  111 ctggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    | |||||  | ||||| ||   |||||||| ||| ||| ||||||||| | || |||||||||||||||||||||||||    
T  41940832 ccggtccagt-tgttcacatgagcaaagtgaatgacattgagtaaggctattgtctccccctccaaaactgtcatattt 41940909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 12660503 - 12660329
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||| ||||||| || |||  |||    
T  12660503 ataatactagaaacaatatcatagaattctgaatcaccgtggcccgaagacgatagagcttgcactagagtagctgagtcagactcgacgataacacggt 12660404  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    | ||| ||||| ||   |||||||| ||| ||||||||||| | |||||||||| ||| || |||||||||||||    
T  12660403 ctcatttgttcacattagcaaagtgaatgacatcgagtaagactactgcctcccgctctaacactgtcatatttg 12660329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 11375537 - 11375686
Alignment:
Q  40 aattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgttcccaaccgcaaagt 139  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| |||   | || ||||| ||||||||| |||||||| | ||  || ||||||| |    
T  11375537 aattccgaatcaccatggaccggagacgatagagcttgcactagaatagatgaatcagactcaaagacaacccggtcccatatatttgcatccgcaaaat 11375636  T
Q  140 gtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    | | ||| ||||||||||| |||| |||||||||||||||||||||||||    
T  11375637 gaagggcctcgagtaaggctactgtctccccctccaaaactgtcatattt 11375686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 30222848 - 30222930
Alignment:
Q  26 aaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagaca 108  Q
    ||||||||||||| ||||| |||||||| || |||| |||||||||||||||||||||||||||  |||| || |||||||||    
T  30222848 aaacaatagcatagaattccgaatcaccgtgacccgaagacgatagcgcttgcactagagtagctgagtcagattcgaagaca 30222930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 37448230 - 37448138
Alignment:
Q  98 actcgaagacaacctggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||||||||||||| ||| |||||||||| || | |||||||| ||| ||||||||||||| || |||||||| | ||| |||||||| ||||    
T  37448230 actcgaagacaacccggttccatctgttcacatcagcaaagtgaatgacatcgagtaaggctaccgcctcccctttcaacactgtcatgtttg 37448138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 23075019 - 23074950
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagag 85  Q
    ||||||||  |||||||| |||| |||| ||||||||||||| ||| ||||||||  |||||||||||||    
T  23075019 ataatactataaacaataacatagaattatgaatcaccatggaccgaagacgataaagcttgcactagag 23074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 32632702 - 32632607
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||| | ||||||||  |||| ||||||||||||| ||||| |||||||||||  |||| ||||| |||||   |||| ||||| |||||||||    
T  32632702 ataatattagaaacaatgtcatagaattctgaatcactatggctcggagacgataaagcttacactaaagtagatgagtcagactcaaagacaacc 32632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 22289428 - 22289254
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||    
T  22289428 ataatactagaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacagcccggt 22289329  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  22289328 cccatttgttcccaacggcaaagtgaatggcatcgagtaaggcaaccacctccccctccaaaactgtcatatttg 22289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 16732120 - 16731946
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||   |||||||||||||||||||  |||    
T  16732120 ataatactagaaacaatagcagagaattctgaatcaccatggcccggagatgatagagcttgcactagagtagacgagtcggactcgaagacaactcggt 16732021  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||||| || | ||| |||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  16732020 tccatctgttcgcatcagcagagtgaatggcctcgagtaaggctactgcctccccctccaatactgtcatatttg 16731946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 17710254 - 17710080
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||   |||||||||||||||||||  |||    
T  17710254 ataatactagaaacaatagcagagaattctgaatcaccatggcccggagatgatagagcttgcactagagtagacgagtcggactcgaagacaactcggt 17710155  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||||| || | ||| |||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  17710154 tccatctgttcgcatcagcagagtgaatggcctcgagtaaggctactgcctccccctccaatactgtcatatttg 17710080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 29200955 - 29201130
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||  |||| ||||||||||||||| | |    
T  29200955 ataatactagaaacaatagcatagaattctgaatcaccatggcccagagacgatagagcttgcactagagtagctgagtcagactcgaagacaacccgtt 29201054  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
     |||||||||| || | |||||||| ||| |||| |||||     || ||||||||||||||||||||||||||||    
T  29201055 tccatctgttcacatcagcaaagtgaatgacatcaagtaaacatgctacctccccctccaaaactgtcatatttgt 29201130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 30493610 - 30493784
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    ||||||||||||||||||||||||    
T  30493610 ataatactataaacaatagcataaaattctgaatcaccatggcccgaagacgatagagcttgcactagagtaattgagtcggactcgaagacaacctggt 30493709  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    | |||||||||  | | || ||||| | | |||| |||||||| ||||||| ||||||||||||||||||| ||||    
T  30493710 ctcatctgttcatatcagctaagtgaacgacatcaagtaaggctactgcct-cccctccaaaactgtcatacttgt 30493784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 9328602 - 9328775
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||  ||||| |||||||||| |||||| ||||  |||||||| ||||||||||||||| || |||| ||||| ||||||||| |||    
T  9328602 ataatactagaaacaaacgcatagaattctgaattaccatgtcccgctgacgatagagcttgcactagagtatcagagtcagactccaagacaacccggt 9328701  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    ||||||||||  || | |||||||| || ||| |||||||||| |||||||||||||||||||| |||||||||    
T  9328702 cccatctgtttacatcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatattt 9328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 16098676 - 16098502
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| | ||||| ||||||||||   |||||||||||||||||||| ||||    
T  16098676 taatactagaaacaatatcatagaattctgaatcaccatggcccggagacgatggagcttgtactagagtagatgagtcggactcgaagacaacccggtc 16098577  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    |||| ||||  || | ||||| || | ||| || |||||||| ||| |||| |||||||||| ||||||||||||    
T  16098576 ccatttgttagcatcagcaaattgaagggcctctagtaaggctactacctctccctccaaaattgtcatatttgt 16098502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 3275221 - 3275068
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  |||||||||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||||  ||||||||||||||||||||  ||    
T  3275221 ataatactaaaaacaatagcataaaattatgaatcatcgtggcctagagatgatagcgcttgcactagagtagctgagtcggactcgaagacaacccagt 3275122  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccc 169  Q
    || || |||||||||| |||||||| || |||| |||||| | |||||||||||    
T  3275121 cctatatgttcccaacagcaaagtgaatagcattgagtaaagtaactgcctccc 3275068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 3601839 - 3601744
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||||||   ||||||||||||| ||||||    
T  3601839 ataatactagaaacaatagcataaaattctgaatcaccatggtccagagacgataaagcttgcactagagtagatgagtcggactcgaaaacaacc 3601744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 44480972 - 44480893
Alignment:
Q  31 atagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaac 110  Q
    |||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||  |||||||||||||||||||    
T  44480972 atagcataaaattccgaatcaccatgacccggagacgataacgtttgcagtagagtagcggagtcggactcgaagacaac 44480893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 24139221 - 24139145
Alignment:
Q  13 tagataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagc 89  Q
    ||||||||||| |||||||||||||||||||   ||||| |||| ||||||||||| || |||||||||||||||||    
T  24139221 tagataatactagaaacaatagcataaaatttcaaatcaacatgacccggagacgacagagcttgcactagagtagc 24139145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 1581793 - 1581648
Alignment:
Q  26 aaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgtt 125  Q
    ||||||| ||||| ||||  |||||||||||| ||||||||||||| | ||||| ||| ||||   ||| |||||| || | |||| | || ||||||||    
T  1581793 aaacaatggcatagaatttcgaatcaccatggtccggagacgatagagtttgcattagtgtagatgagttggactccaatagaacccgatctcatctgtt 1581694  T
Q  126 cccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccc 171  Q
    | || | |||||||| | ||| ||||||||||| ||||| ||||||    
T  1581693 cgcatcagcaaagtgaagggcctcgagtaaggctactgcatccccc 1581648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 30824557 - 30824646
Alignment:
Q  98 actcgaagacaacctggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    |||||||||||||||| |||||||||||| ||   | |||||| | ||| ||||||||||| |||||||  |||| ||||||||||||||||    
T  30824557 actcgaagacaacctgatcccatctgttcgcattagaaaagtgaagggcctcgagtaaggctactgcct--cccttcaaaactgtcatattt 30824646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 17877585 - 17877422
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| ||||  ||||||||||| |||  | ||||||| |||||||| ||          || ||||||||||||||| | |    
T  17877585 ataatactagaaacaatagcatagaattacgaatcaccatgacccataaacgatagagcttgcacgag----------tcagactcgaagacaacccgat 17877496  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
     |||||||||| ||   | |||||| | ||| | ||||||||| ||| ||||||||||||| ||||||||||||    
T  17877495 tccatctgttcgcatttgtaaagtgaagggccttgagtaaggctacttcctccccctccaatactgtcatattt 17877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 30824494 - 30824559
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcact 81  Q
    |||| ||| ||||||||| |||| ||||||||||||||||| ||| |||||||||| || ||||||    
T  30824494 ataagactagaaacaataacatagaattctgaatcaccatgacccagagacgatagagcatgcact 30824559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 9e-66; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 48949724 - 48949898
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||||| |||    
T  48949724 ataatactagaaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagttgaactcgaagacaacccggt 48949823  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||||||||  ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  48949824 cccatctgttcccaacaacaaagtgaatcgcatcgagtaaggcaactgcctccccctccaaaactttcatatttg 48949898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 51113502 - 51113328
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  51113502 ataatactagaaacaatagcataaaactccgaatcaccatggcccagagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacccggt 51113403  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||| || |||||||    
T  51113402 cccatctgttcccaacaacaaagtgaatgacatcgagtaaggcaactgcctccccctccaaaacggttatatttg 51113328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 44527439 - 44527265
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||||   |||||||||||||||||||| ||||    
T  44527439 taatactagaaacaatagcatagaattccgaatcaccatggcccggagatgatagagcttgcacaagagtagatgagtcggactcgaagacaacccggtc 44527340  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    |||||||||  || | |||||||| | ||| || |||||||| ||||||||||||||||||||||||||||||||    
T  44527339 ccatctgttagcatcagcaaagtgaagggcctctagtaaggctactgcctccccctccaaaactgtcatatttgt 44527265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 25682838 - 25682664
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||| ||| |||||| ||||||  ||||||||||||||||| ||||| |||||||||||  ||||  ||||||||||| || |||    
T  25682838 ataatactagaaacaatagtatagaattctaaatcactgtggcccggagacgatagagcttgtactagagtagctgagtcaaactcgaagacagcccggt 25682739  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||| ||   |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  25682738 cccatctgttcacattagcaaagtgaatgacatcgagtaaggctactgcctccccctccaacactgtcatatttg 25682664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 5609526 - 5609351
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||| | ||||||||||||||   ||||| |||||||||||||| | |    
T  5609526 ataatactagaaacaatagcatagaattctgaatcaccatgaccctgagacgatagagtttgcactagagtagatgagtcgaactcgaagacaacccgat 5609427  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    | ||||||||| ||||  ||||||| | | | ||||||||||| ||||||||||||| ||||||| ||||||||||    
T  5609426 ctcatctgttcgcaacatcaaagtgaaggacctcgagtaaggctactgcctcccccttcaaaactatcatatttgt 5609351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 44602939 - 44602764
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||  |||  ||||||||| ||||| |||    
T  44602939 ataatactagaaacaatagcatagaattttgaatcaccatggcccggagatgatagagcttgcactagagtagcggagttagactcgaaggcaacccggt 44602840  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    | ||||||||| || | | |||||| ||| ||||||||||| | | || |||||||||||||| ||||||||||||    
T  44602839 ctcatctgttcacatcagtaaagtgaatgacatcgagtaagactaatgtctccccctccaaaattgtcatatttgt 44602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 36733883 - 36733710
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||| ||||||| ||||||||||||||||||  ||||||||||||||   | |||| ||||||||||||||| |||    
T  36733883 ataatactagaaacaataacatagaattatgaatcatcatggcccggagacgatatagcttgcactagagttatagagtcagactcgaagacaacccggt 36733784  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    ||||| ||||| || | |||||||| ||  ||| ||||||| | |||||||||||||||||||||| |||||||    
T  36733783 cccatttgttcacatcagcaaagtgaataacattgagtaagactactgcctccccctccaaaactgccatattt 36733710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 4395345 - 4395172
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  ||||||||| ||| ||||||||||||||||| ||  |||||||||| ||||||||||||||||   ||| ||||||||||| ||||||||    
T  4395345 ataatactataaacaataggatagaattctgaatcaccatgaccttgagacgatagagcttgcactagagtagatgagttggactcgaagataacctggt 4395246  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||| ||| || | |||||||| | ||| ||||||||||| | ||||| ||||| ||||||| |||||||||    
T  4395245 cccatctattcgcatcagcaaagtgaagggcctcgagtaaggctagtgcct-ccccttcaaaactctcatatttg 4395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 16816797 - 16816973
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcac---catggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacct 112  Q
    |||||||| ||||||||||| || ||||| |||||||   |||||| |||||||| |||  |||| ||||||||||   ||||||||||||||||||||     
T  16816797 ataatactagaaacaatagcgtagaattccgaatcacgtccatggctcggagacggtagaacttgaactagagtagacgagtcggactcgaagacaaccc 16816896  T
Q  113 ggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||||||||||||  || | ||||| || | ||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  16816897 ggtcccatctgtttgcatcagcaaaatgaagggcctcgagtaaggctactgcct-cccctccaaaattgtcatatttg 16816973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 2885410 - 2885315
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||||| |||||||||||||| || || |||||||||| ||||| ||||||||| |||||||||||||||||  |||| |||||||||||||||    
T  2885410 ataatactagaaacaatagcatataactccgaatcaccatagcccgaagacgatagagcttgcactagagtagctgagtctgactcgaagacaacc 2885315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 48166410 - 48166250
Alignment:
Q  30 aatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgttccca 129  Q
    ||||||||| ||||||| |||||||| | ||  |||| |||| ||||||| |||||||||  | || ||||||||||||||| | |||||| | ||| ||    
T  48166410 aatagcatagaattctgtatcaccatcgtcccaagactatagagcttgcaatagagtagctgaatcagactcgaagacaacccgatcccatatattcaca 48166311  T
Q  130 accgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
       |||||||| ||| ||||||||||||| | || ||||| ||||||||||||||||||||    
T  48166310 taagcaaagtgaatgacatcgagtaaggctattgtctcccactccaaaactgtcatatttg 48166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 52109639 - 52109479
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| ||||||||| |||| ||||| |||||||||||| |||||||| |||| ||||| ||||||||||   | ||  |||| |||||||||   ||    
T  52109639 taatactagaaacaataacatagaattccgaatcaccatggtccggagacaatagagcttgtactagagtagatgaatcacactcaaagacaacc-catc 52109541  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaa 178  Q
    |||||||||  || | |||||||| | | | ||||||||||| ||||| |||||||||||||    
T  52109540 ccatctgttagcatcagcaaagtgaaggacctcgagtaaggctactgcatccccctccaaaa 52109479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 21031336 - 21031263
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagc 89  Q
    |||||||| ||||| ||| |||||||||| |||||||||| | ||||||||||||| |||||||||||| ||||    
T  21031336 ataatactagaaactataacataaaattccgaatcaccatagtccggagacgatagagcttgcactagaatagc 21031263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 24538674 - 24538569
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||| |||||| || ||||||||||||| ||| |||| ||  |||||  ||||||||||||||| | |||| |||||||| | |||  |||    
T  24538674 ataatactagaaataatagcgtagaattctgaatcactatgacccgaagcagatagatcttgcactagagtagaagagtcagactcgaaaagaactcggt 24538575  T
Q  116 cccatc 121  Q
    ||||||    
T  24538574 cccatc 24538569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 51259529 - 51259704
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51259529 ataatactagaaacaataacataaaattctgaatcaccatggcccgaagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacctggt 51259628  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcct-ccccctccaaaactgtcatatttg 190  Q
    || | ||| ||||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  51259629 ccgaactgatcccaacagcaaagtgaatgacatcgagtaaggcaactgcctcccccctccaaaactgtcatatttg 51259704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 37245852 - 37246026
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||||| || |||||||||| ||||||| |||| ||||||||||||||| |||    
T  37245852 ataatactagaaacaatagcatagaattctgaatcaccatggcccagagacgaaagagcttgcactaaagtagcagagtcagactcgaagacaacccggt 37245951  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||| ||   |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  37245952 cccatctgttcacataagcaaagtgaatagcatcgagtaaggctactgcctccccctccaaaactgtcatatttg 37246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 56065820 - 56065642
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaat----caccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||| | |||||||||||||||||||| ||||    |||||||| | ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  56065820 ataatattagaaacaatagcataaaattccgaattaatcaccatggtctggagatgatagcgcttgcactagagtagctgagtcggactcgaagacaacc 56065721  T
Q  112 tggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  56065720 cggtcccatatattcccaacagcaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 56065642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 29655666 - 29655840
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||  |||| ||||||||||||||  |||    
T  29655666 ataatactagaaacaataacatagaattctgaatcaccatggcccgaagatgatagagcttgcactagagtagcgtagtcagactcgaagacaacacggt 29655765  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||||| || | |||||||| ||| ||||||||||||| |||||||| ||||||||||| ||||||||||    
T  29655766 tccatctgttcacatcagcaaagtgaatgacatcgagtaaggctactgcctctccctccaaaacagtcatatttg 29655840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 41835311 - 41835485
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||| ||||||||||||||   | ||| |||||||||||||| |||    
T  41835311 ataatactagaaacaatagcataggattccgaatcaccatggcccggagacgatagcgtttgcactagagtagatgaatcgaactcgaagacaacccggt 41835410  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||  || ||||||| || | ||  ||||||||||| ||||| |||||||||||||||||||||||||    
T  41835411 cccatctgtttgcatccgcaaaatgaagggtctcgagtaaggctactgcatccccctccaaaactgtcatatttg 41835485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 49951500 - 49951326
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| | ||||||||||||||| |||||| ||| ||||  ||||||||||||||||   |||||||||||||||||||  |||    
T  49951500 ataatactagaaacaatagcagagaattctgaatcaccacggcccgaagatgataaagcttgcactagagtagacgagtcggactcgaagacaactcggt 49951401  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||||| || | |||||||| | ||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  49951400 tccatctgttcgcatcagcaaagtgaagggcctcgagtaaggctactgcctccccctccaatactgtcatatttg 49951326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 51734972 - 51735145
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||| ||||||||||||| || |||||||||| ||||||||||||||||   || | |||||||||||||| | ||    
T  51734972 ataatactagaaacaatatcatagaattatgaatcaccatggtccagagacgatagagcttgcactagagtagaggagcctgactcgaagacaac-tcgt 51735070  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    || |||| ||| || | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51735071 cctatctattcacatcagcaaagtgaatggcatcgagtaaggctactgcctccccctccaaaactgtcatatttg 51735145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 55735196 - 55735022
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||   | ||||||||||| | |||| |||    
T  55735196 ataatactagaaacaatagcatagaattctgaatcaccatggtccgaagacgatagagcttgcactagagtagatgaatcggactcgaaaataacccggt 55735097  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||| ||||| ||||  ||||||| | ||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  55735096 tccatgtgttcgcaacaacaaagtgaagggcctcgagtaaggctactgcctccccctccaatactgtcatatttg 55735022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 18442147 - 18442318
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||  ||||||||  |||||||||||  |||   ||||| ||||||| | |||| |||    
T  18442147 ataatactagaaacaatagcatagaattctgaatcaccatgggccaaagacgatatagcttgcactag--tagatgagtcgcactcgaaaataacccggt 18442244  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
     |||||||||| |||| |||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  18442245 tccatctgttcgcaacagcaaagtgtagggcctcgagtaaggctactgcctccccctccaatactgtcatattt 18442318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 28426370 - 28426196
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||| ||||| |||||| ||| |||||| ||||  |||||||| ||| ||||||||||| || |||| |||| |||||||||| |||    
T  28426370 ataatactagaaacaatcgcatataattctaaattaccatgtcccgctgacgatagagctggcactagagtatcagagtcagacttgaagacaacccggt 28426271  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||  || | |||||||| || ||| |||||||||| |||||||||||||||||||| ||||||||||    
T  28426270 cccatctgtttacatcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatatttg 28426196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 28537787 - 28537958
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||| |||||||||||||||| |||||||||| |||||||||| |||||   ||||||||| ||| |||||| |||    
T  28537787 ataatactagaaacaatagcatagaattttgaatcaccatggcccagagacgatagagcttgcactaaagtagatgagtcggacttgaacacaacccggt 28537886  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    ||||||||||| || |  ||||||| | ||| ||||||||||| ||||||||||||||  ||||| ||||||||    
T  28537887 cccatctgttcgcatcaacaaagtgaagggcctcgagtaaggctactgcctccccctc--aaactatcatattt 28537958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 49119400 - 49119574
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||| ||||| |||||| ||| |||||| ||||  |||||||| ||| ||||||||||| || |||| |||| |||||||||| |||    
T  49119400 ataatactagaaacaatcgcatataattctaaattaccatgtcccgctgacgatagagctggcactagagtatcagagtcagacttgaagacaacccggt 49119499  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||  || | |||||||| || ||| |||||||||| |||||||||||||||||||| ||||||||||    
T  49119500 cccatctgtttacatcagcaaagtgaatagcagcgagtaaggctactgcctccccctccaaaacagtcatatttg 49119574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 43840306 - 43840482
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| ||||| |||||||||||| ||| ||||||||| ||||||| |||||||||  ||||| |||||||||||| | |||    
T  43840306 ataatactagaaacaatagcatagaattccgaatcaccatggtccgaagacgatagagcttgcattagagtagctgagtcgaactcgaagacaaaccggt 43840405  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagt-aaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    | ||| ||||| || | |||||||| |||||||||||| ||||    || |||||||||||| ||||||||||||||    
T  43840406 ctcatttgttcacatcagcaaagtgaatggcatcgagtaaaggttgttgtctccccctccaacactgtcatatttgt 43840482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 32577048 - 32577222
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  ||||||| ||||| ||||||||||||||||| ||||  |||||| | |||||||||||||||||| |||| |||||||||||||||  ||    
T  32577048 ataatactataaacaatcgcatagaattctgaatcaccatgtcccgctgacgattgagcttgcactagagtagcagagtcagactcgaagacaacccagt 32577147  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||| ||||  || | |||||||  || ||| |||||||||| | | |||||||||||||||| ||||||||||    
T  32577148 cccatatgtttacatcagcaaagtaaatagcagcgagtaaggctagtacctccccctccaaaacagtcatatttg 32577222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 21321704 - 21321540
Alignment:
Q  28 acaatagcataaaattctgaatcaccatggcccggagacgatagcgc--ttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgtt 125  Q
    |||||| |||| ||||||||||||||||| ||| ||||| |||| ||  ||||||||||||||   |||||||||||||||||||| |||||||||||||    
T  21321704 acaataacatagaattctgaatcaccatgaccctgagacaatagagcaattgcactagagtagatgagtcggactcgaagacaacccggtcccatctgtt 21321605  T
Q  126 cccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
      || | | |||||| | ||| ||||||||||| | || ||||||||||||||||||||||||||    
T  21321604 agcatcagaaaagtgaagggcctcgagtaaggctattgtctccccctccaaaactgtcatatttg 21321540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 26422602 - 26422762
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  ||||||| ||||| ||||||||||||| ||| ||||  |||||||| ||||||||||||||| || |||| ||||||||||||||| | |    
T  26422602 ataatactaaaaacaatcgcatagaattctgaatcactatgtcccgctgacgatagagcttgcactagagtatcagagtcagactcgaagacaacccgat 26422701  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaa 176  Q
    ||||||||||  || | |||||||  || |||||||||||||| |||||||||| ||||||    
T  26422702 cccatctgtttacatcagcaaagtaaatagcatcgagtaaggctactgcctccctctccaa 26422762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 2065040 - 2064866
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| ||||  ||||||||||| || ||||||||||| |||||  |||||||||   |||| ||||| ||||||||| |      
T  2065040 ataatactagaaacaatagcatataatttcgaatcaccatgacctggagacgatagagcttgggctagagtagatgagtccgactcaaagacaacccgac 2064941  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||||| || | |||||||| | ||| ||||||||||| ||||||||||||| ||| |||||||||||||    
T  2064940 tccatctgttctcatcagcaaagtgaagggcgtcgagtaaggctactgcctcccccttcaatactgtcatatttg 2064866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 47226330 - 47226493
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| || ||||||||||||||||| | ||||||||| |||||| ||| |||||   ||||||||||||| |||||  | |    
T  47226330 ataatactagaaacaatagcatataaatctgaatcaccatggcctgaagacgatagagcttgctctaaagtagatgagtcggactcgaacacaactcgat 47226429  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaac 179  Q
    | ||||||||| || | |||||||| |  || ||||||||| | | | ||||||||||||||||    
T  47226430 ctcatctgttcgcatcagcaaagtgaaaagcctcgagtaagactattacctccccctccaaaac 47226493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 24989934 - 24990027
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaac 110  Q
    |||||||| |||||| || |||| |||| ||||||||| |||||| |||||| ||| |||||||||||||||||  |||| ||||| ||||||||    
T  24989934 ataatactagaaaca-taacatagaattttgaatcaccgtggcccagagacggtagagcttgcactagagtagctgagtcagactcaaagacaac 24990027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 44936082 - 44936177
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||| | ||||||||| |||| |||||| ||||||| ||||||| | ||||||| | |||||||||||||    ||||||||||||| ||||||    
T  44936082 ataataatagaaacaataacatagaattctaaatcaccgtggcccgaaaacgatagagtttgcactagagtaaatgagtcggactcgaacacaacc 44936177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 9e-63; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 55199698 - 55199525
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||||||  ||||||||| |||||||||| |||    
T  55199698 ataatactagaaacaatagcataaaattccgaatcaccatgacccgtagacgatagcgcttgcaccagagtagctgagtcggacttgaagacaacccggt 55199599  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    |||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55199598 cccatctgtttccaacaacaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 55199525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 53497218 - 53497044
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||| ||||    
T  53497218 taatactagaaacaatagcatagaattccgaatcaccatggcccggagacgatagagcttgcacaagagtagatgagtcggactcgaagacaacccggtc 53497119  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    |||||||||  || | |||||||| | ||| || |||||||| |||||||||||||| |||||||||| ||||||    
T  53497118 ccatctgttagcatcagcaaagtgaagggcctctagtaaggctactgcctccccctcaaaaactgtcacatttgt 53497044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 42340277 - 42340448
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||  |||| ||||||||||||||  |||    
T  42340277 ataatattagaaacaatagcatagaattctgaatcaccatggcccggagacgacagagcttgcactaaagtagctgagtctgactcgaagacaactcggt 42340376  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatat 187  Q
    ||||||||||| || | |||||||| ||| ||||||||| ||| | ||||||||||||||| ||||||||||    
T  42340377 cccatctgttcacatctgcaaagtgaatgacatcgagtagggctattgcctccccctccaacactgtcatat 42340448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 27608903 - 27608998
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27608903 ataatactagaaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacc 27608998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 11020180 - 11020355
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||  ||| |||| ||||||  ||||| |||||||||||||||  ||    
T  11020180 ataatactagaaacaatagcacagaattctgaatcaccatggcccggagacgatagaccttacactggagtagttaagtcagactcgaagacaacccagt 11020279  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
     |||| |||||||| | |||||||  || ||||||||||| ||   || |||||||||||||| ||||||||||||    
T  11020280 tccatttgttcccatcagcaaagtaaatagcatcgagtaaagctgatgtctccccctccaaaagtgtcatatttgt 11020355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 34497372 - 34497467
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  34497372 ataatactaggaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcactagagtagctgagtcggactcgaagacaacc 34497467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 647173 - 647305
Alignment:
Q  26 aaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgtt 125  Q
    |||||| | |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||   |||| |||||||||| |||  |||| ||||||||    
T  647173 aaacaacaacatagaattccgaatcaccatggcccggagacgatagagcttgcactagagtagatgagtcagactcgaagataactcggtcacatctgtt 647272  T
Q  126 cccaaccgcaaagtgtatggcatcgagtaaggc 158  Q
    | || | |||||||| ||| |||||||||||||    
T  647273 cacatcagcaaagtgaatgacatcgagtaaggc 647305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 46007486 - 46007315
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||| || |||||||||||||||||||| ||||| |||||||||||||||||||  | ||||||||||||||   | ||||||||||||||| ||        
T  46007486 ataatgctagaaacaatagcataaaattccgaatcgccatggcccggagacgatatagtttgcactagagtagttgaatcggactcgaagacaccc---g 46007390  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||||||||||  | |  ||||||| |||||||| |||||||| |||| ||||||||  |||| |||| ||||||    
T  46007389 cccatctgttcatatcgacaaagtgaatggcatcaagtaaggctactgtctccccctaaaaaattgtcgtatttg 46007315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 19117720 - 19117784
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcac 80  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19117720 ataatactaaaaacaatagcataaaattccgaatcaccatggcccggagacgatagcgcttgcac 19117784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 2121268 - 2121124
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| |||||| ||||| | |||||||  ||||| |||| ||||||| ||||||||  ||||||||||| || |||||  | |    
T  2121268 ataatactagaaacaatagcacaaaattatgaataatcatggcctagagacaatagagcttgcattagagtagttaagtcggactcaaaaacaacacgat 2121169  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaa 160  Q
    ||||||| |||  | | |||||||| ||| |||||||||| ||||    
T  2121168 cccatctattcatatcagcaaagtgaatgacatcgagtaaagcaa 2121124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 647308 - 647383
Alignment:
Q  113 ggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatt 188  Q
    |||||||||||||| || | |||||||| ||| |||||||||||||  ||||||||||||||| ||||||||||||    
T  647308 ggtcccatctgttcacatcagcaaagtgaatgacatcgagtaaggctgctgcctccccctccataactgtcatatt 647383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 2615670 - 2615506
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  |||||||| |||| ||||||||||||||||||| |  ||||||||| ||| ||||||||||||   ||||||| |  |||||||| |  |    
T  2615670 ataatactaaaaacaatatcatagaattctgaatcaccatggcacaaagacgatagagctcgcactagagtagttgagtcggattgaaagacaacatttt 2615571  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||||| |          ||||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  2615570 cccatcag----------caaagtgaacgacatcgagtaaggctactgcctccccctccaaaactatcatatttg 2615506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 24176957 - 24176862
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||||| || |||||||| || ||||| ||||||||||| ||| |||||||||| ||||||||||||||||    ||| |||||||||||||||    
T  24176957 ataatactagatacaatagcttagaattccgaatcaccatgacccagagacgatagagcttgcactagagtagttgtgtcagactcgaagacaacc 24176862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 31341725 - 31341801
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagac----gatagcgcttgcactagagtag 88  Q
    |||||| | |||||||||| ||||||||||||||||||||| |||||||||    ||||| ||||||||||||||||    
T  31341725 ataatattagaaacaatagtataaaattctgaatcaccatgacccggagacgtaggatagagcttgcactagagtag 31341801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 27747685 - 27747739
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgata 70  Q
    ||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||    
T  27747685 ataatactaaaaacaatagcatagaattttgaatcaccatggcccggagacgata 27747739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 27941129 - 27941169
Alignment:
Q  151 agtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  27941129 agtaaggctactgcctccccctccaaaactatcatatttgt 27941169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 34695907 - 34696078
Alignment:
Q  19 atactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtccc 118  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||| | ||||    
T  34695907 atactagaaacaatagcataaaattctgaatcaccatgacccggagacgataacgcttgcactagagtagcggagtcggactcgaagacaacccgttccc 34696006  T
Q  119 atctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||| ||  || | |||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  34696007 atctattgacatcagcaaagtgaatggccttgagtaaggctactgcctccccctccaaaactgtcatatttg 34696078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 34718319 - 34718490
Alignment:
Q  19 atactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtccc 118  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||| | ||||    
T  34718319 atactagaaacaatagcataaaattctgaatcaccatgacccggagacgataacgcttgcactagagtagcggagtcggactcgaagacaacccgttccc 34718418  T
Q  119 atctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||| ||  || | |||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  34718419 atctattgacatcagcaaagtgaatggccttgagtaaggctactgcctccccctccaaaactgtcatatttg 34718490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 88746 - 88572
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||||||||||||||||  |  |||||||||| ||||||||||||||||   |||||||||||||||||||| |||    
T  88746 ataatactggaaacaatagcatagaattctgaatcaccatgatcttgagacgatagagcttgcactagagtagatgagtcggactcgaagacaacccggt 88647  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||  || |  ||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  88646 cccatctgttagcatcaacaaagtgaagggcctcgagtaaggctactgcctccccctccaaaactgtcatatttg 88572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 9710013 - 9709941
Alignment:
Q  119 atctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9710013 atctgttcccaaccgcaaagtgaatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 9709941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 22845725 - 22845600
Alignment:
Q  14 agataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctg 113  Q
    |||||||||| ||||||||||| || |||||||||||||||||  | ||||||||||| ||||||||||||||||   ||| |||||||||||||||| |    
T  22845725 agataatactagaaacaatagcctagaattctgaatcaccatgatctggagacgatagagcttgcactagagtagattagttggactcgaagacaacccg 22845626  T
Q  114 gtcccatctgttcccaaccgcaaagt 139  Q
    ||||||||||||| || | |||||||    
T  22845625 gtcccatctgttcgcatcagcaaagt 22845600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 13109869 - 13109976
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||||| || |||||  ||||||||||||||| ||||||||| |||| ||||||||||| | ||||||||||||||||||||  ||    
T  13109869 ataatactggaaacaatagcttataattccaaatcaccatggcccgaagacgatagagcttccactagagtagaagagtcggactcgaagacaaccatgt 13109968  T
Q  116 cccatctg 123  Q
    ||||||||    
T  13109969 cccatctg 13109976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 9710142 - 9710036
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||| ||||| |||| ||||| |||||| ||||  |||||||| ||||||||||||||| ||||||| ||||||||||||||| |||    
T  9710142 ataatactagaaacaattgcatagaattatgaattaccatgtcccgctgacgatagagcttgcactagagtatcaaagtcagactcgaagacaacccggt 9710043  T
Q  116 cccatct 122  Q
    |||||||    
T  9710042 cccatct 9710036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 12130638 - 12130812
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||| ||||||||| ||||||||||||||||| |||| ||| ||||| ||||| ||||||||||   |||| |||||||||| |||| | |    
T  12130638 ataatactagaaataatagcatagaattctgaatcaccatgtcccgaagatgatagagcttggactagagtagatgagtcagactcgaagataacccgat 12130737  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||| ||  || | |||||||| |  || || |||||||| ||||||||||||||||| ||| |||||||||    
T  12130738 tccatctatttgcatcagcaaagtgaagagcctcaagtaaggctactgcctccccctccaacactatcatatttg 12130812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 44017318 - 44017492
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||  |||||||| ||||| |||||| ||| ||||||   |||||||||||| |||||||||| |||| |  |||| |||||||||||||| ||||    
T  44017318 ataatacaagaaacaatggcatataattcttaatgaccatgtttcggagacgatagagcttgcactaaagtaacggagtcagactcgaagacaacttggt 44017417  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    | ||| ||||| ||   |||| ||| ||||||||||||||||    || ||||||||||||||||||||||||||    
T  44017418 ctcatatgttcacattagcaacgtgaatggcatcgagtaaggttgttgtctccccctccaaaactgtcatatttg 44017492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 1417981 - 1418090
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||||||||||||||| | || ||||| |||| ||||| ||||||||||   |||| |||||||||||||||  ||    
T  1417981 ataatactagaaacaatagcatagaattctgaatcaccatagtccagagacaatagagcttgaactagagtagatgagtcagactcgaagacaacccagt 1418080  T
Q  116 cccatctgtt 125  Q
    ||||||||||    
T  1418081 cccatctgtt 1418090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 26198874 - 26198778
Alignment:
Q  11 ggtagataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagac 107  Q
    |||| |||||||| |||||||||||||| ||||   | |||||||| ||  |||||||||| |||||||||||||||||  ||||||||||||||||    
T  26198874 ggtaaataatactagaaacaatagcatagaatttcaattcaccatgacctagagacgatagagcttgcactagagtagctgagtcggactcgaagac 26198778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 11292063 - 11292157
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    ||||||||  |||||||| ||||||||| ||||||| ||||||| | | ||||||| ||||||||||||||||   |||||||||| |||||||||    
T  11292063 ataatactataaacaataacataaaattttgaatcatcatggcc-gaaaacgatagagcttgcactagagtagatgagtcggactcaaagacaacc 11292157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 18345563 - 18345661
Alignment:
Q  92 agtcggactcgaagacaacctggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    ||||||| ||||||||||   | |||||||||||  || | |||||||| | ||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  18345563 agtcggattcgaagacaattcgatcccatctgttagcatcagcaaagtgaagggcctcgagtaaggctactgcctccccct-caaaactgtcatatttgt 18345661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 14827253 - 14827173
Alignment:
Q  30 aatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaac 110  Q
    ||||||||| ||||  ||||||||||| |||  | ||||||| ||||||||||||||||| ||||| || || ||||||||    
T  14827253 aatagcatagaatttcgaatcaccatgacccaaacacgatagagcttgcactagagtagctaagtcagattcaaagacaac 14827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 26198762 - 26198705
Alignment:
Q  133 gcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    |||||||  |||||||| || ||||| ||||| ||||||||||||||||||||||||||    
T  26198762 gcaaagtaaatggcatcaag-aaggctactgcatccccctccaaaactgtcatatttgt 26198705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 35158845 - 35158895
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagac 66  Q
    |||||| | |||||||||||||| |||||||||||| ||||||||| ||||    
T  35158845 ataataatagaaacaatagcatagaattctgaatcatcatggcccgaagac 35158895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 377 - 199
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaat----caccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacc 111  Q
    |||||| | |||||||||||||||||||| ||||    |||||||| | ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  377 ataatattagaaacaatagcataaaattccgaattaatcaccatggtctggagatgatagcgcttgcactagagtagctgagtcggactcgaagacaacc 278  T
Q  112 tggtcccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||||| | |||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  277 cggtcccatatattcccaacagcaaagtgaatggcatcgagtaaggcaactgcctccccctcccaaactgtcatatttg 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 15605994 - 15606163
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||||||||   ||||||||||||||| ||  |||||||||| |||||||||||||||||  ||||||||| |||||||||| |||    
T  15605994 ataatactagaaacaatagcatagtgttctgaatcaccatgacctagagacgatagagcttgcactagagtagctgagtcggacttgaagacaacccggt 15606093  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcat 185  Q
    ||||| |||||||| |  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  15606094 cccatttgttcccatcaacaaagtgaatggcatcgagtaaggctactgcctccccctccaaaactgtcat 15606163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 28107326 - 28107155
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||  |||||||||||||| || |    
T  28107326 ataatactagaaacaataacatagaattctgaatcaccatggcccggagacgatagagcttgcactagagtagcggagttagactcgaagacaacgtgat 28107227  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatat 187  Q
    ||||||| |||  |   |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  28107226 cccatctattcatatttgcaaagtgaatggcatcaagtaaggctactgcctccccctccaaaactgtcatat 28107155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 30801991 - 30802165
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| |||||  | |||||||||| |||| ||||||| |||||||||| ||||||  | ||||||||||||||||||| ||    
T  30801991 ataatactagaaacaataacatagaattccaagtcaccatggctcggaaacgatagagcttgcactaaagtagctgaatcggactcgaagacaacctagt 30802090  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||| | ||| || | |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  30802091 cccattttttcacatctgcaaagtaaatggcatctagtaaggctactgcctcccccaccaaaactgtcatatttg 30802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 33 - 189
Target Start/End: Original strand, 15053192 - 15053348
Alignment:
Q  33 agcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtcccatctgttcccaacc 132  Q
    |||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||| ||| ||| | ||| |  |     
T  15053192 agcatagaattccgaatcaccatggcccgaagacgatagcgtttgcactagagtagctgagtcggactcgaagacaaccttgtctcattttttcacgtca 15053291  T
Q  133 gcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    |||| | | ||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  15053292 gcaaggcgaatggcatcgagtaaggctactgcctccccctccaacactatcatattt 15053348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 19690879 - 19691054
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||  |||| |||||  |||||||||| | | |||||||||| |||||||||| ||||||  |||| ||||||||||||||  |||    
T  19690879 ataatactagaaacaatgacatagaattccaaatcaccatgactcagagacgatagagcttgcactaaagtagctgagtcagactcgaagacaactcggt 19690978  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    | ||||||||| || | |||||||| ||| |||||| |||||| | ||||||||| |||||||| |||||||||||    
T  19690979 cacatctgttcacatcagcaaagtgaatgacatcgaataaggctattgcctccccttccaaaacggtcatatttgt 19691054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 14680349 - 14680176
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||| | |||| ||||||||||  ||||||||| ||||| ||||||| ||||||||   ||||||| || ||||||||  |||    
T  14680349 ataatactagaaacaatagcagagaattttgaatcaccactgcccggagatgatagagcttgcaatagagtagacgagtcggaatcaaagacaactcggt 14680250  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
     |||||||||  || | ||| |||| | ||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  14680249 tccatctgtttgcatcagcagagtgaagggcctcgagtaaggctactgcctccccctccaatactgtcatattt 14680176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 34104465 - 34104538
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagc 89  Q
    ||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34104465 ataatactaaaaacaatagcataaaattctgaatcaccatggtccggagacgatagcgcttgcactagagtagc 34104538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 29368057 - 29368229
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| ||| |||||||||| ||||  ||||||| ||| |||||||||||||| |||||||||| |||||   ||||||||||||| |||    ||||    
T  29368057 taatactagaagcaatagcatagaattacgaatcactatgacccggagacgatagagcttgcactatagtagatgagtcggactcgaaaacagttaggtc 29368156  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
    |||||| ||  || | |||||||| | ||| ||||||||||  | ||||||||||||||||||||||||||||    
T  29368157 ccatctattagcatcagcaaagtgaagggcctcgagtaaggatattgcctccccctccaaaactgtcatattt 29368229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 27443117 - 27443045
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagc 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  27443117 ataatactagaaacaatagcataaaattctgaatcaccatggcctagagacgatagcgc-tgcactagagtagc 27443045  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 11731673 - 11731840
Alignment:
Q  20 tactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtccca 119  Q
    |||| |||||| ||||||| || || ||| ||||||||||||||||| |||| |||||||||| | |   | |||||||||||||||||||||| ||| |    
T  11731673 tactagaaacagtagcatagaactccgaaccaccatggcccggagacaatagagcttgcactatattgaaagagtcggactcgaagacaacctgttccta 11731772  T
Q  120 tctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    | ||||| || | |||||||| |  |  |||||  ||||  |||||| |||||||||||||||||||||||    
T  11731773 tatgttctcatcagcaaagtgaagagtctcgag--aggctgctgcct-cccctccaaaactgtcatatttg 11731840  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 21944628 - 21944668
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatg 56  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  21944628 ataatactagaaacaatagcatagaattctgaattaccatg 21944668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 7127410 - 7127236
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||| |||| ||| || |||||||||||||||||||||| || |||||||||| ||||||| |||| ||||||||| ||||| |||    
T  7127410 ataatacttgaaacaataacatagaatactaaatcaccatggcccggagacgaaagagcttgcactaaagtagcatagtcagactcgaaggcaacccggt 7127311  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||||||| || | |||||||| || |||||||||||||| ||| ||||||||||||||||| |||||||||    
T  7127310 cccatctgttcacatcagcaaagtgaatagcatcgagtaaggctactacctccccctccaaaactttcatatttg 7127236  T

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Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 478056 - 478230
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||| | ||||||||| |||||||| | ||||||||||  |||||||||||||| |||||||||||||||| | |||| || ||||||| |||| |||    
T  478056 ataatattagaaacaatatcataaaataccgaatcaccataacccggagacgatagagcttgcactagagtagtagagtcagattcgaagataacccggt 478155  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    ||||||| ||| ||   |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  478156 cccatctattcacattagcaaagtgaatggcatcgagtaaggctactgcctccccctccaaaactgtcatatttg 478230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 23854118 - 23853946
Alignment:
Q  17 taatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggtc 116  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |   |||||||||||||||||||   |||    
T  23854118 taatactagaaacaatagcatagaattctgaatcaccatggcccggagacgatagagcttgcactagagttgatgagtcggactcgaagacaactcagtc 23854019  T
Q  117 ccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatattt 189  Q
     ||||||||  || |  ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||||    
T  23854018 tcatctgttagcatcaacaaagtgaatggcctcaagtaaggctactgcctcaccctccaaaactgtcatattt 23853946  T

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Target: chr8; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 13415210 - 13415035
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||   ||||||||||||||| | | |||||||| ||||||||  | |    
T  13415210 ataatactaaaaacaatagcataaaattcagaatcaccatggcccggggacgatataccttgcactagagtagaagaatcggactcaaagacaactcgat 13415111  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttgt 191  Q
    ||||||||||  || |||||||  | | ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  13415110 cccatctgtttgcatccgcaaaaggaagggcctcgagtaaggctactgcctccccctccaaaactgtcatatttgt 13415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 185591 - 185764
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||||||||| || |||||||||| ||||||| |||| |||||| |||||||| |||    
T  185591 ataatactagaaacaatagcatagaattctgaatcaccatggtccggagacgaaagagcttgcactaaagtagcagagtcagactcgtagacaacccggt 185690  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
     |||||| ||| || |  ||||||| || | |||||||||||| ||| ||| |||||||||||||||||||||||    
T  185691 tccatctattcacatcaacaaagtgaatagtatcgagtaaggctacttcct-cccctccaaaactgtcatatttg 185764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 8451123 - 8451297
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| || |||||| |||||||||| ||||||||||| || ||||||||||  |||||||||| |||||   |||| ||||||||||||||| |||    
T  8451123 ataatactagacacaataacataaaattccgaatcaccatgacctggagacgataaagcttgcactaaagtagatgagtcagactcgaagacaacccggt 8451222  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    |||||| |||| || | || ||||| |||| ||||||||| || ||||||||||||||||| |||||||||||||    
T  8451223 cccatccgttcacatcagcgaagtgaatggaatcgagtaaagctactgcctccccctccaacactgtcatatttg 8451297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 40588730 - 40588904
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    ||||||||  ||||||||||||| ||||| |||||| |||||||||| |||||||| | || |||||||||||   | || ||||| ||||||||| |||    
T  40588730 ataatactataaacaatagcatagaattcagaatcatcatggcccggggacgatagagtttacactagagtagatgaatcagactcaaagacaacccggt 40588829  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatttg 190  Q
    | ||||||||  || |||||||  | | ||| ||||||| ||| ||||||||||||||||||||||| |||||||    
T  40588830 ctcatctgtttgcatccgcaaaacgaagggcctcgagtacggctactgcctccccctccaaaactgttatatttg 40588904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 33642764 - 33642861
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctg 113  Q
    |||||||| ||||||||| |||  ||||||||||||||||||||||||||||| || ||||||| ||||||||   ||| ||||| ||||||||||||    
T  33642764 ataatactagaaacaatatcattgaattctgaatcaccatggcccggagacgacagagcttgcattagagtagatgagttggacttgaagacaacctg 33642861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 598237 - 598337
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| || |  ||||||||||| || | ||||||||| ||||||||||||||||| ||||| |||| |||||||||| |||    
T  598237 ataatactagaaacaatagcatagaacttcgaatcaccatgacctgaagacgatagagcttgcactagagtagctaagtccgacttgaagacaacccggt 598336  T
Q  116 c 116  Q
    |    
T  598337 c 598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 37712260 - 37712129
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| ||||||||||||||  ||||||||||||||| | ||| |||| |||| |||| |||||||||||||  |||  ||| ||||| |||||| |    
T  37712260 ataatactagaaacaatagcatagtattctgaatcaccat-gtccgaagacaatagagcttacactagagtagcagggtcaaactagaagataacctgat 37712162  T
Q  116 cccatctgttcccaaccgcaaagtgtatggcat 148  Q
    | ||||||||| || |  ||||||| |||||||    
T  37712161 ctcatctgttcacatcaacaaagtgaatggcat 37712129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 11870451 - 11870364
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcga 103  Q
    |||||||| |||||||||||||| || || ||||||||||||| | ||||| |||| |||||||| ||||||||  |||| |||||||    
T  11870451 ataatactagaaacaatagcatagaaatccgaatcaccatggctccgagacaatagagcttgcacaagagtagctgagtcagactcga 11870364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 3606739 - 3606849
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaagacaacctggt 115  Q
    |||||||| |||||||||||||| |||||  | |||||||| ||| |||||||||| | ||| |||| ||| |   ||||||||| ||| ||||| ||||    
T  3606739 ataatactagaaacaatagcatagaattccaagtcaccatgaccctgagacgatagagtttgtactaaagttgttgagtcggacttgaaaacaacttggt 3606838  T
Q  116 cccatctgttc 126  Q
     ||||||||||    
T  3606839 tccatctgttc 3606849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 9496851 - 9496797
Alignment:
Q  134 caaagtgtatggcatcgagtaaggcaactgcctccccctccaaaactgtcatatt 188  Q
    ||||||| ||| |||| |||||||| |||||||| ||||||||||||||||||||    
T  9496851 caaagtgaatgtcatcaagtaaggctactgcctcaccctccaaaactgtcatatt 9496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 44244 - 44316
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagc 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  44244 ataatactagaaacaatagcataaaattctgaatcaccatggcctagagacgatagcgc-tgcactagagtagc 44316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 264 - 352
Alignment:
Q  16 ataatactcgaaacaatagcataaaattctgaatcaccatggcccggagacgatagcgcttgcactagagtagcaaagtcggactcgaa 104  Q
    |||||||| |||||||||||||| |||||||||| |||||| || ||||| ||||| ||||||||||||||||   |||||||||||||    
T  264 ataatactagaaacaatagcatagaattctgaattaccatgacctggagatgatagagcttgcactagagtagatgagtcggactcgaa 352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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