View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13173_low_29 (Length: 288)
Name: NF13173_low_29
Description: NF13173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13173_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 271
Target Start/End: Complemental strand, 7970160 - 7969908
Alignment:
| Q |
19 |
ataagggcttaattaagttgttttgctatgtgtttcgatacagtgggaagaagcctgaatatcttggagttcagaaaaactcatcagcattggctctgtg |
118 |
Q |
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| T |
7970160 |
ataagggcttaattaagttgttttgctatgtgtttcgatacagtgggaagaagcctgaatatcttggagttcagaaaaactcatcagcattggctctgtg |
7970061 |
T |
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| Q |
119 |
tccagcaactaagaattgtgtatcaacctccgagaatgtcaatgatctcacccattatgctcctccttggtaaagtttccttctttttcttcagtggatt |
218 |
Q |
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| T |
7970060 |
tccagcaactaagaattgtgtatcaacctctgagaatgtcaatgatctcacccattatgctcctccttggtaaagtttccttctttttcttcagcggatt |
7969961 |
T |
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| Q |
219 |
ttagccttagttttctgaaactatatgaattatctacaatttctgtttttcat |
271 |
Q |
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| T |
7969960 |
ttagccttagttttctgaaactatatgaattatctacaatttctgtttttcat |
7969908 |
T |
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