View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13173_low_31 (Length: 273)
Name: NF13173_low_31
Description: NF13173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13173_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 10 - 257
Target Start/End: Complemental strand, 37604437 - 37604190
Alignment:
| Q |
10 |
agatgaagacaagtaacttccaatgaaaggaaaatcaatcaaaacccactcaactaaacctctttgttccttacatggttaaggatgatggaaaaaagaa |
109 |
Q |
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| T |
37604437 |
agatgaagacaagtaacttccaatgaaaggaaaatcaatcaaaacccactcaactaaacctctttgttccttacatggttaaggatgatggaaaaaagaa |
37604338 |
T |
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| Q |
110 |
cacatcttatcttaaaaccacttttaaggaagaattgtctacaaagtgcatcatcattcacaaggcacaaacaaaatcaccgctggtttcaatatcatcg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604337 |
cacatcttatcttaaaaccacttttaaggaagaattgtctacaaagtgcatcatcattcacaaggcacaaacaaaatcaccgctggtttcaatatcatcg |
37604238 |
T |
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| Q |
210 |
atgtcagcatctgtatctaaatcatcaaaatccatacttccaccaaga |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604237 |
atgtcagcatctgtatctaaatcatcaaaatccatacttccaccaaga |
37604190 |
T |
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