View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13173_low_8 (Length: 600)

Name: NF13173_low_8
Description: NF13173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13173_low_8
NF13173_low_8
[»] chr1 (18 HSPs)
chr1 (13-286)||(11611908-11612181)
chr1 (511-584)||(11612215-11612288)
chr1 (416-508)||(39001945-39002037)
chr1 (416-507)||(3695405-3695496)
chr1 (417-508)||(6750310-6750401)
chr1 (427-512)||(26653950-26654035)
chr1 (425-511)||(794908-794994)
chr1 (416-508)||(11121855-11121947)
chr1 (425-512)||(571641-571728)
chr1 (416-503)||(18808781-18808868)
chr1 (419-508)||(41998881-41998970)
chr1 (425-505)||(44272365-44272446)
chr1 (428-508)||(1585858-1585938)
chr1 (443-508)||(4792594-4792659)
chr1 (419-508)||(24909510-24909599)
chr1 (416-485)||(36290612-36290681)
chr1 (465-505)||(9224872-9224912)
chr1 (416-479)||(7409822-7409885)
[»] scaffold0306 (1 HSPs)
scaffold0306 (416-512)||(13055-13151)
[»] scaffold0152 (1 HSPs)
scaffold0152 (416-512)||(22176-22272)
[»] chr6 (10 HSPs)
chr6 (416-511)||(444516-444611)
chr6 (416-503)||(2814889-2814976)
chr6 (418-508)||(6200163-6200253)
chr6 (416-508)||(24640351-24640443)
chr6 (416-505)||(1067801-1067891)
chr6 (417-508)||(26393989-26394080)
chr6 (416-506)||(23774069-23774159)
chr6 (464-508)||(12324170-12324214)
chr6 (418-482)||(34710135-34710199)
chr6 (424-487)||(2993591-2993654)
[»] chr5 (18 HSPs)
chr5 (418-508)||(34766885-34766975)
chr5 (417-508)||(3729333-3729424)
chr5 (416-505)||(39508315-39508404)
chr5 (417-508)||(41929339-41929430)
chr5 (417-506)||(8159070-8159159)
chr5 (416-504)||(9793634-9793722)
chr5 (416-508)||(9793731-9793823)
chr5 (416-505)||(20736157-20736246)
chr5 (417-502)||(21583853-21583938)
chr5 (417-503)||(21020686-21020772)
chr5 (443-508)||(25081765-25081830)
chr5 (443-508)||(25139734-25139799)
chr5 (425-505)||(9913803-9913883)
chr5 (426-505)||(3711183-3711266)
chr5 (443-508)||(20815668-20815733)
chr5 (418-480)||(41910219-41910281)
chr5 (443-506)||(2068963-2069024)
chr5 (416-508)||(38451038-38451119)
[»] chr2 (24 HSPs)
chr2 (416-510)||(21423361-21423455)
chr2 (416-510)||(5958962-5959056)
chr2 (419-508)||(37060081-37060170)
chr2 (417-508)||(13274199-13274289)
chr2 (417-507)||(6974517-6974607)
chr2 (416-505)||(27004450-27004539)
chr2 (416-500)||(4382213-4382297)
chr2 (416-511)||(14786235-14786324)
chr2 (416-508)||(28107487-28107579)
chr2 (425-505)||(30393600-30393680)
chr2 (425-508)||(24475940-24476023)
chr2 (419-505)||(10217357-10217443)
chr2 (416-502)||(15070389-15070475)
chr2 (443-508)||(37140160-37140225)
chr2 (417-504)||(30609686-30609773)
chr2 (418-505)||(5807321-5807407)
chr2 (416-506)||(37802835-37802925)
chr2 (425-505)||(22194291-22194371)
chr2 (449-497)||(27404647-27404695)
chr2 (416-472)||(30757183-30757239)
chr2 (425-500)||(43022890-43022964)
chr2 (416-478)||(7747944-7748006)
chr2 (427-482)||(27969511-27969566)
chr2 (416-482)||(15431254-15431320)
[»] chr3 (15 HSPs)
chr3 (416-508)||(36404221-36404313)
chr3 (416-505)||(39391958-39392047)
chr3 (417-506)||(45602984-45603073)
chr3 (425-508)||(14201715-14201796)
chr3 (425-494)||(16353497-16353566)
chr3 (416-508)||(29360480-29360572)
chr3 (419-507)||(35534481-35534569)
chr3 (417-508)||(37115887-37115978)
chr3 (416-508)||(46487268-46487359)
chr3 (416-503)||(48944104-48944191)
chr3 (425-508)||(52742350-52742433)
chr3 (416-490)||(54882991-54883065)
chr3 (416-492)||(3618339-3618415)
chr3 (418-481)||(47599389-47599452)
chr3 (419-489)||(48644538-48644608)
[»] chr8 (18 HSPs)
chr8 (425-508)||(23403596-23403679)
chr8 (418-508)||(30204649-30204739)
chr8 (417-506)||(4623850-4623939)
chr8 (425-508)||(23275535-23275618)
chr8 (434-508)||(22798539-22798613)
chr8 (416-505)||(14842309-14842398)
chr8 (417-508)||(16655976-16656067)
chr8 (416-503)||(39436844-39436931)
chr8 (416-506)||(21567707-21567797)
chr8 (425-506)||(3001385-3001466)
chr8 (416-508)||(36470134-36470227)
chr8 (427-512)||(45310026-45310110)
chr8 (425-508)||(4234176-4234259)
chr8 (417-508)||(37630000-37630091)
chr8 (425-508)||(29958522-29958605)
chr8 (416-503)||(36046528-36046614)
chr8 (418-510)||(41787492-41787584)
chr8 (465-506)||(4414226-4414267)
[»] chr4 (13 HSPs)
chr4 (417-504)||(12701040-12701127)
chr4 (416-509)||(21555377-21555470)
chr4 (416-508)||(36609412-36609505)
chr4 (416-508)||(35929705-35929797)
chr4 (425-505)||(56100146-56100226)
chr4 (416-508)||(23249468-23249560)
chr4 (418-495)||(827840-827917)
chr4 (416-506)||(19598367-19598457)
chr4 (425-505)||(41842789-41842868)
chr4 (417-508)||(44243696-44243787)
chr4 (417-508)||(27733381-27733465)
chr4 (457-505)||(53584606-53584654)
chr4 (418-506)||(35749385-35749473)
[»] scaffold0302 (1 HSPs)
scaffold0302 (417-508)||(18503-18594)
[»] scaffold0025 (1 HSPs)
scaffold0025 (419-508)||(67870-67959)
[»] scaffold0140 (1 HSPs)
scaffold0140 (416-508)||(21474-21566)
[»] chr7 (8 HSPs)
chr7 (418-506)||(8163644-8163732)
chr7 (416-506)||(40337065-40337155)
chr7 (416-505)||(41326042-41326131)
chr7 (425-511)||(35589415-35589501)
chr7 (416-505)||(28089134-28089224)
chr7 (418-506)||(2362383-2362471)
chr7 (416-472)||(43403210-43403266)
chr7 (468-505)||(31637707-31637744)
[»] scaffold0532 (1 HSPs)
scaffold0532 (416-505)||(11320-11409)
[»] scaffold0121 (1 HSPs)
scaffold0121 (416-508)||(37402-37494)
[»] scaffold1248 (1 HSPs)
scaffold1248 (417-504)||(970-1057)
[»] scaffold0952 (1 HSPs)
scaffold0952 (417-504)||(1256-1343)


Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 13 - 286
Target Start/End: Original strand, 11611908 - 11612181
Alignment:
Q  13 aatatagcataccattcgacaaaagcattgaaatttacgtactgttatatttcatgggaacatacttcagcaccactttccttcctttgcattcattttt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11611908 aatatagcataccattcgacaaaagcattgaaatttacgtactgttatatttcatgggaacatacttcagcaccactttccttcctttgcattcattttt 11612007  T
Q  113 gacagaaatggcttttgagaggaaaacctatgcaaacagtgtcttttttgggcattgaaacaccttagagtgattaattaggaatgaattgttggtaata 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612008 gacagaaatggcttttgagaggaaaacctatgcaaacagtgtcttttttgggcattgaaacaccttagagtgattaattaggaatgaattgttggtaata 11612107  T
Q  213 atggcgttattgttaaagagtaattttcatgtgttccaacttctactctcctttatcatcagaaactgagaaac 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612108 atggcgttattgttaaagagtaattttcatgtgttccaacttctactctcctttatcatcagaaactgagaaac 11612181  T

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Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 511 - 584
Target Start/End: Original strand, 11612215 - 11612288
Alignment:
Q  511 ttcaagggaagggaggtaggaaatgaaaagttgattggggttctggatctgcagggtatttcgtataagaatgt 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612215 ttcaagggaagggaggtaggaaatgaaaagttgattggggttctggatctgcagggtatttcgtataagaatgt 11612288  T

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Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 39002037 - 39001945
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39002037 gggactaaaactaaaacatgtaaaaggataactattgcaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 39001945  T

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Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 507
Target Start/End: Complemental strand, 3695496 - 3695405
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacagg 507  Q
    |||||||| |||||||||||||| |  ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3695496 gggactaaaactaaaacatgtaaaatgataactattatgaaaaggggacttgtatatttcaaaaaccgaaaacaaaaactatttcaaacagg 3695405  T

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Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 6750310 - 6750401
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| |  ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6750310 ggactaaaactaaaacatgtaaaaagataactattgtgaaaaagggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 6750401  T

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Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 427 - 512
Target Start/End: Original strand, 26653950 - 26654035
Alignment:
Q  427 taaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 512  Q
    |||||||||||| || ||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  26653950 taaaacatgtaaaaggataaccattgtgagaagaggacctgtatatttcaaaaattgaaaacaaaaactatttcaaacaggccctt 26654035  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 511
Target Start/End: Complemental strand, 794994 - 794908
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccct 511  Q
    |||||||||||||| || ||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  794994 actaaaacatgtaaaaggataactattgtgagaagaagacctgtatatttcaaaaactgaaaacaaaaaatatttcaaacatgccct 794908  T

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Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 11121947 - 11121855
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| |  ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  11121947 gggactaaaactaaaacatgtaaaatgataactattgtgcgaagatgacttgtatatttcaaaaactgaaaacaaaaactattataaacaggc 11121855  T

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Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 425 - 512
Target Start/End: Complemental strand, 571728 - 571641
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 512  Q
    |||||||||||||| |  ||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  571728 actaaaacatgtaaaatgataactattatgagaagaggacgtatatatttcaaaaactgaaaacaaaaactatttcaaagaggccctt 571641  T

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Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 416 - 503
Target Start/End: Complemental strand, 18808868 - 18808781
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||| |||||||||| ||| || ||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||    
T  18808868 gggactaaaactaaaacatataaaaggataactattgtgagaagaagacttgtatatttcataaactgaaaacaaaaattatttcaaa 18808781  T

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Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 508
Target Start/End: Original strand, 41998881 - 41998970
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||| |||||||||| ||| |  |||| |||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41998881 actaaaactaaaacatataaaaagataaatattgtgagaagaagacttgtatatttcaaaaaatgaaaacaaaaactatttcaaacaggc 41998970  T

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Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 44272365 - 44272446
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttc-aaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||| | |||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  44272365 actaaaacatgtaaaataataaccattatgaaaagagaacttgtatatttcaaaaaactgaaaacaaaaactatttcaaaca 44272446  T

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Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 428 - 508
Target Start/End: Complemental strand, 1585938 - 1585858
Alignment:
Q  428 aaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||||||| || ||||||||||| | |||| ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1585938 aaaacatgtaaaaggataactattgtaagaagaagacttgtatatttcaaaaactaaaaacataaactatttcaaacaggc 1585858  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 508
Target Start/End: Original strand, 4792594 - 4792659
Alignment:
Q  443 ataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  4792594 ataactattgtgagaagagaacttgtatatttcaaaaactaaaaacaaaaactattttaaacaggc 4792659  T

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Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 419 - 508
Target Start/End: Original strand, 24909510 - 24909599
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||| || |||| |||||| || ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||||||||    
T  24909510 actaaaacgaaaatatgtaaaaggataactattgtgagaagagaactagtatattttaaaaactgaaaataaaaactatttcaaacaggc 24909599  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 416 - 485
Target Start/End: Complemental strand, 36290681 - 36290612
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaa 485  Q
    |||||||| |||||||||||||| |  ||||||||||| | |||||||||||||||||||||||||||||    
T  36290681 gggactaaaactaaaacatgtaaaatgataactattgtcagaagaggacttgtatatttcaaaaactgaa 36290612  T

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Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 505
Target Start/End: Original strand, 9224872 - 9224912
Alignment:
Q  465 ttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  9224872 ttgtgtatttcaaaaactgaaaacaaaaactatttcaaaca 9224912  T

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Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 479
Target Start/End: Original strand, 7409822 - 7409885
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaa 479  Q
    |||||||| |||||||||||||| || ||||||||| ||| ||||| |||  ||||||||||||    
T  7409822 gggactaaaactaaaacatgtaaaaggataactattatgagaagagaactattatatttcaaaa 7409885  T

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Target: scaffold0306 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 13055 - 13151
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 512  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13055 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 13151  T

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Target: scaffold0152 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 22272 - 22176
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 512  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22272 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 22176  T

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Target: chr6 (Bit Score: 76; Significance: 8e-35; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 416 - 511
Target Start/End: Complemental strand, 444611 - 444516
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccct 511  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  444611 gggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactattttaaacatgccct 444516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 503
Target Start/End: Original strand, 2814889 - 2814976
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||| |||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2814889 gggactaaaactaaaacatgtaaaatgataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 2814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 6200163 - 6200253
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||| ||||||| |||||| || ||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||    
T  6200163 gactaaaactaaaatatgtaaaaggataactattgtgagaagagaatttgtatatttcaaaaactgaaaacaaaaaatatttcaaacaggc 6200253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 24640351 - 24640443
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||| ||  || ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  24640351 gggactaaaactaaaacatatagaaggataactattatgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaagaggc 24640443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 1067891 - 1067801
Alignment:
Q  416 gggactaatactaaaacatgtaata-gaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||| ||| | |  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1067891 gggactaaaactaaaacatataaaaagggtaactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 1067801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 26393989 - 26394080
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| |  |||| ||||| || |||| || || |||||||||||||||||||||||||||||||||||| ||||    
T  26393989 ggactaaaactaaaacatgtaaaatgataaatattgcgagaagaagatttttatatttcaaaaactgaaaacaaaaactatttcaaagaggc 26394080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 23774159 - 23774069
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||| ||| |||||||||| ||| || ||||||||| ||| ||||| |||||||||||||||||| | |||| ||||||||||||||||||    
T  23774159 gggattaaaactaaaacatataaaaggataactattatgagaagagaacttgtatatttcaaaaattaaaaataaaaactatttcaaacag 23774069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 12324214 - 12324170
Alignment:
Q  464 cttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  12324214 cttgtatatttcaaaaactgaaaacaaaaactacttcaaacaggc 12324170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 482
Target Start/End: Complemental strand, 34710199 - 34710135
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaact 482  Q
    |||||| |||||||||| ||| |||||||||| ||||| ||||| ||||||||||||||||||||    
T  34710199 gactaaaactaaaacatataaaagaataactactgtgagaagagaacttgtatatttcaaaaact 34710135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 2993591 - 2993654
Alignment:
Q  424 tactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaa 487  Q
    |||||||| || ||| || ||||||||||||| ||||| |||||||||||||||||||| ||||    
T  2993591 tactaaaagatataaaaggataactattgtgagaagagaacttgtatatttcaaaaactaaaaa 2993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 34766885 - 34766975
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34766885 gactaaaactaaaacatgtaaaagaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaacaggc 34766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 3729333 - 3729424
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| || |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3729333 ggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 3729424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 416 - 505
Target Start/End: Original strand, 39508315 - 39508404
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||    
T  39508315 gggactaaaactaaaacatgtaaaagaataactattgtgagaaaaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 39508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 41929430 - 41929339
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| || |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  41929430 ggactaaaactaaaacatgtaaaaggataactattgcgaaaagagaacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggc 41929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 8159070 - 8159159
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||| |||||||||||||| || |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8159070 ggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaacag 8159159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 9793634 - 9793722
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    |||||||| |||||||||||||| || ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  9793634 gggactaaaactaaaacatgtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 9793722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 9793731 - 9793823
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| ||||||||| |||| || ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9793731 gggactaaaactaaaacaagtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 9793823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 505
Target Start/End: Original strand, 20736157 - 20736246
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||||||| |  ||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  20736157 gggactaaaactaaaacatgtaaaatgataactattgtgaaaggaggacttatatttttcaaaaattgaaaacaaaaactatttcaaaca 20736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 417 - 502
Target Start/End: Complemental strand, 21583938 - 21583853
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaa 502  Q
    ||||||| |||||||||||||| |  ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  21583938 ggactaaaactaaaacatgtaaaaagataactattatgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaa 21583853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 21020772 - 21020686
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    ||||||| |||||| ||| ||| || |||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  21020772 ggactaaaactaaatcatataaaaggataactattgcgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaa 21020686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 25081830 - 25081765
Alignment:
Q  443 ataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  25081830 ataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaacaggc 25081765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 25139799 - 25139734
Alignment:
Q  443 ataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  25139799 ataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaacaggc 25139734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 9913883 - 9913803
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||| |  ||||||||| ||| | ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  9913883 actaaaacatgtaaaaagataactattatgagatgagaacttgtatatttcaaaaactaaaaacaaaaactatttcaaaca 9913803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 505
Target Start/End: Complemental strand, 3711266 - 3711183
Alignment:
Q  426 ctaaaacatgtaatagaataactattgtgaaaagaggacttgtatat----ttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||| |  |||||||||||||||| || ||||||||||    |||||||||||||||||||||||||||||||||    
T  3711266 ctaaaacatgtaaaaagataactattgtgaaaatagaacttgtatatatatttcaaaaactgaaaacaaaaactatttcaaaca 3711183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 20815733 - 20815668
Alignment:
Q  443 ataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  20815733 ataactattgtgagaaaaggacttgtatattttaaaaactgaaaacaaaaactattttaaataggc 20815668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 480
Target Start/End: Original strand, 41910219 - 41910281
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaa 480  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||||||||||||| |||||    
T  41910219 gactaaaactaaaacatgtaaaatgataactattgtgaaaagaggacttgtatattttaaaaa 41910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 443 - 506
Target Start/End: Complemental strand, 2069024 - 2068963
Alignment:
Q  443 ataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||| |||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  2069024 ataaatattgtgagaagaagactt--atatttcaaaaactgaaaacaaaaactatttcaaacag 2068963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 38451038 - 38451119
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||||||||| ||| ||||||           |||||||||||||||||||||||||||||||    
T  38451038 gggactaaaactaaaacatgtaaaaggataactattgtgagaaggggactt-----------aaactgaaaacaaaaactatttcaaacaggc 38451119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 510
Target Start/End: Complemental strand, 21423455 - 21423361
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccc 510  Q
    |||||||| ||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21423455 gggactaaaactaaaacatgtaataggataactattgtgagatgaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccc 21423361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 510
Target Start/End: Complemental strand, 5959056 - 5958962
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccc 510  Q
    |||||||| |||||||||||||| || |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5959056 gggactaaaactaaaacatgtaaaaggataactattacgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccc 5958962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 419 - 508
Target Start/End: Original strand, 37060081 - 37060170
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37060081 actaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 37060170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 13274289 - 13274199
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  13274289 ggactaaaactaaaacatgtaaaaga-taactattgtgagaagaggacttgtatatttcaaaaattaaaaacaaaaactatttcaaacaggc 13274199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 417 - 507
Target Start/End: Original strand, 6974517 - 6974607
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacagg 507  Q
    ||||||| |||||||||||||| |  ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  6974517 ggactaaaactaaaacatgtaaaatgataactattgtgagaagagcacttatatatttcaaaaactgaaaacaaaaactatttcaaacagg 6974607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 27004539 - 27004450
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||| ||| || ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  27004539 gggactaaaactaaaacatataaaaggataactattgtgagaagaggacttatatatttcaaaaattgaaaacaaaaactatttcaaaca 27004450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 4382297 - 4382213
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttc 500  Q
    |||||||| |||||||||||||| |  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  4382297 gggactaaaactaaaacatgtaaaatgataactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttc 4382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 511
Target Start/End: Complemental strand, 14786324 - 14786235
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccct 511  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||      |||||||||||||||||||||||||||||    
T  14786324 gggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttca------gaaaacaaaaactatttcaaacaggccct 14786235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 28107487 - 28107579
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||| ||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  28107487 gggattaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaattgtttcaaacaggc 28107579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 30393600 - 30393680
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||| || ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30393600 actaaaacatgtaaaaggataaccattatcaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 30393680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 508
Target Start/End: Original strand, 24475940 - 24476023
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||| |  ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  24475940 actaaaacatgtaaaaagataactattgtgataagaagatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 24476023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 10217357 - 10217443
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||| |||||||||||||| |||||||||||| | ||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  10217357 actaaaactaaaacatgtaaaagaataactattctaaaaagggaacttgtatatttcaaaaactgaaaataaaaactatttcaaaca 10217443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 15070389 - 15070475
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaa 502  Q
    |||||||| || ||||||| ||| || ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  15070389 gggactaaaacaaaaacatataaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaa 15070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 443 - 508
Target Start/End: Original strand, 37140160 - 37140225
Alignment:
Q  443 ataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37140160 ataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 37140225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 417 - 504
Target Start/End: Original strand, 30609686 - 30609773
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    ||||||| |||||||||||||| |  ||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||    
T  30609686 ggactaaaactaaaacatgtaaaatgataactattgtgagaagaagacttgtatatttcaataactgaaaacaaaaacgatttcaaac 30609773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 505
Target Start/End: Original strand, 5807321 - 5807407
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||| |||||||||| ||| || ||||||||||||||||| | | ||||||||||||||||||| |||||||||||||||||||||    
T  5807321 gactaaaactaaaacatataaaaggataactattgtgaaaagggaatttgtatatttcaaaaactg-aaacaaaaactatttcaaaca 5807407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 506
Target Start/End: Original strand, 37802835 - 37802925
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||| |||||||||||||| |  |||| |||| ||| |||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  37802835 gggactaaaactaaaacatgtaaaaagataaatattatgagaagaagacttgtatatttcaaaaatttaaaacaaaaactatttcaaacag 37802925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 22194291 - 22194371
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||| |  ||||||||| | |||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  22194291 actaaaacatgtaaaatgataactattataaaaaaaggacttgtatatttcaaaaaccaaaaacaaaaactatttcaaaca 22194371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 27404647 - 27404695
Alignment:
Q  449 attgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactat 497  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27404647 attgtgagaagaggacttgtatatttcaaaaactaaaaacaaaaactat 27404695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 30757183 - 30757239
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatat 472  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||    
T  30757183 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatat 30757239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 500
Target Start/End: Original strand, 43022890 - 43022964
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttc 500  Q
    |||||||||| ||| || |||| ||| |||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  43022890 actaaaacatataaaaggataattat-gtgagaagaggacttgtatattttaaaaactaaaaacaaaaattatttc 43022964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 478
Target Start/End: Original strand, 7747944 - 7748006
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaa 478  Q
    |||||||| |||||||||||||| |  |||||| |||| | ||||||||||||||||||||||    
T  7747944 gggactaaaactaaaacatgtaaaatgataactcttgtaagaagaggacttgtatatttcaaa 7748006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 482
Target Start/End: Complemental strand, 27969566 - 27969511
Alignment:
Q  427 taaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaact 482  Q
    |||||||| ||| || ||||||||||||| ||| | ||||||||||||||||||||    
T  27969566 taaaacatataaaaggataactattgtgagaagtgaacttgtatatttcaaaaact 27969511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 15431320 - 15431254
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaact 482  Q
    |||| ||| |||||||||||||| || |||||||||  |  |||||||| |||||||||||||||||    
T  15431320 gggattaaaactaaaacatgtaaaaggataactattacgggaagaggacatgtatatttcaaaaact 15431254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 36404221 - 36404313
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36404221 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaagaggc 36404313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 39392047 - 39391958
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||||||| || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  39392047 gggactaaaactaaaacatgtaaaaggataactattgtgaaaagaaaacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 39391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 45603073 - 45602984
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||| |||||||||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45603073 ggactaaaactaaaacatgtaaaaggataactattgtgataagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 45602984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 508
Target Start/End: Complemental strand, 14201796 - 14201715
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  14201796 actaaaacatgtaaaagaataactattgtgaaaagaggactt--atatttcaaaaactgaaaacaaaaactatttcaaacaggc 14201715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 16353497 - 16353566
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaac 494  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16353497 actaaaacatgtaaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaac 16353566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 29360572 - 29360480
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  29360572 gggactaaaactaaaacatgtaaaaggataactactgtgagaagaggacttgtatatttcaaaaactgaaaagaaaaattgtttcaaacaggc 29360480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 507
Target Start/End: Complemental strand, 35534569 - 35534481
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacagg 507  Q
    ||||| |||||||||| ||| |  ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  35534569 actaaaactaaaacatataaaatgataactattgtgagaagaagacttgtatatttcaaaaactgaaaacaaaaactattttaaacagg 35534481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 37115887 - 37115978
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||| ||| |  |||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  37115887 ggactaaaactaaaacatataaaatgataactattgcgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaacaggc 37115978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 46487359 - 46487268
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||| ||| |  ||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  46487359 gggactaaaactaaaacatataaaatgataactattgtgagaagaagacttatatatttcaaaaactgaaaa-aaaaactatttcaaacaggc 46487268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 503
Target Start/End: Original strand, 48944104 - 48944191
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||| || ||||||||||| |  ||||||||||| | ||||||||||||||||||||||| || |||| |||||||||||||||    
T  48944104 gggactaaaacaaaaacatgtaaaatgataactattgtaagaagaggacttgtatatttcaaaagctaaaaagaaaaactatttcaaa 48944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 508
Target Start/End: Complemental strand, 52742433 - 52742350
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||| |  |||||||||| || ||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  52742433 actaaaatatgtaaaatgataactattgcgataagagaatttgtatatttcaaaaactggaaacaaaaactatttcaaacaggc 52742350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 416 - 490
Target Start/End: Original strand, 54882991 - 54883065
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaa 490  Q
    |||||||| ||||||||| |||| || |||| |||||||| |||||||||| |||||||||||||| ||||||||    
T  54882991 gggactaaaactaaaacacgtaaaaggataaatattgtgagaagaggacttctatatttcaaaaaccgaaaacaa 54883065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 492
Target Start/End: Original strand, 3618339 - 3618415
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaa 492  Q
    |||||||| |||||||||||||| |  |||| |||||||| ||||  |||||||||||||| |||||||||||||||    
T  3618339 gggactaaaactaaaacatgtaaaaagataaatattgtgagaagaaaacttgtatatttcagaaactgaaaacaaaa 3618415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 47599452 - 47599389
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaac 481  Q
    |||||| |||||||||||||| || ||||||||||||| ||||||| |||||||||| ||||||    
T  47599452 gactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatattttaaaaac 47599389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 489
Target Start/End: Complemental strand, 48644608 - 48644538
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaaca 489  Q
    ||||| |||||||||||||| |  |||| |||||||| |||| || |||||||||||||||| ||||||||    
T  48644608 actaaaactaaaacatgtaaaatgataaatattgtgagaagatgatttgtatatttcaaaaattgaaaaca 48644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 425 - 508
Target Start/End: Complemental strand, 23403679 - 23403596
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23403679 actaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaataggc 23403596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 30204649 - 30204739
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||| |||||||||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  30204649 gactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaagaggc 30204739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 4623850 - 4623939
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||| |||||||||||||| || ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  4623850 ggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaacag 4623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 508
Target Start/End: Original strand, 23275535 - 23275618
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23275535 actaaaacatgtaaaagaataactaccgtaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaagaggc 23275618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 434 - 508
Target Start/End: Complemental strand, 22798613 - 22798539
Alignment:
Q  434 tgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22798613 tgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 22798539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 14842398 - 14842309
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||| ||| ||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14842398 gggattaaaactaaaatatgtaaaatgataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaattatttcaaaca 14842309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 16656067 - 16655976
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| |  ||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  16656067 ggactaaaactaaaacatgtaaaatgataactattgtgagaagaaggcttgtatattttaaaaactgaaaacaaaaactatttcaaacaggc 16655976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 416 - 503
Target Start/End: Complemental strand, 39436931 - 39436844
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||| |||||||||| ||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||    
T  39436931 gggactaaaactaaaacatataaaaaaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaattatttcaaa 39436844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 21567797 - 21567707
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||| |||||||||||||| |  ||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21567797 gggactaaaactaaaacatgtaaaaagataactattgtaagaagaggatttgtatatttctaaaactgaaaacaaaaactatttcaaacag 21567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 3001385 - 3001466
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||||||||| |  ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3001385 actaaaacatgtaaaaagataaccattgtgagaagaggacttgtatatttcaaaaactgaaaataaaaactatttcaaacag 3001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 36470134 - 36470227
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactg-aaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  36470134 gggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaaacaaaaattatttcaaagaggc 36470227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 427 - 512
Target Start/End: Original strand, 45310026 - 45310110
Alignment:
Q  427 taaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctt 512  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  45310026 taaaacatgtaa-agaataaccattatgaaaagagaacttgtatatttcaaaaattgaaaacaaaaactatttcaaacaagccctt 45310110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 425 - 508
Target Start/End: Complemental strand, 4234259 - 4234176
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||| ||  ||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  4234259 actaaaacatgtaaaaggctaactattgcgagaagatgacttgtatatttcaaaaactgaaaacaaaaactattttaaacaggc 4234176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 37630091 - 37630000
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| ||  ||||||||| || |||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  37630091 ggactaaaactaaaacatgtaaaaggctaactattgcgagaagagggcttatatatttaaaaaactgaaaacaaaaactatttcaaacaggc 37630000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 508
Target Start/End: Original strand, 29958522 - 29958605
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||| || ||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  29958522 actaaaacatgtaaaaggataactattgtaataagatgacttgtatatttcaaaaactgaaaacaaaaattattttaaagaggc 29958605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 416 - 503
Target Start/End: Original strand, 36046528 - 36046614
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||| ||| |||||||||||||| || |||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||||    
T  36046528 gggattaaaactaaaacatgtaaaaggataactattgtgaaaaggagatttgtatatttcaaaaactg-aaacaaaaactatttcaaa 36046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 510
Target Start/End: Complemental strand, 41787584 - 41787492
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccc 510  Q
    |||||| |||||||||||||| |  ||||||||||| | ||||| | || ||||||| |||||||||||||||||||||||| ||||| ||||    
T  41787584 gactaaaactaaaacatgtaaaaagataactattgtaagaagagaatttatatattttaaaaactgaaaacaaaaactattttaaacatgccc 41787492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 506
Target Start/End: Complemental strand, 4414267 - 4414226
Alignment:
Q  465 ttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4414267 ttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 4414226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 417 - 504
Target Start/End: Complemental strand, 12701127 - 12701040
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    ||||||| |||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  12701127 ggactaaaactaaaacatgtaaaagaataactattgtaagaagaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 12701040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 416 - 509
Target Start/End: Complemental strand, 21555470 - 21555377
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggcc 509  Q
    |||||||| |||||||||||||| || ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  21555470 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaaccggcc 21555377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 36609412 - 36609505
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactg-aaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  36609412 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaaacaaaaactatttcaaacaggc 36609505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 35929797 - 35929705
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||| ||| |  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35929797 gggactaaaactaaaacatataaaatgataactattgtgagaagaggacttatatatttcaaaaactgaaaacaaaaactatttcaaacaggc 35929705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 56100146 - 56100226
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  56100146 actaaaacatgtaaaaggataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 56100226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 23249560 - 23249468
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| || ||||||||||||| |||||| |||||||||||||||||| ||||||||||| | ||||||||||||    
T  23249560 gggactaaaactaaaacatgtaaaaggataactattgtgagaagagggcttgtatatttcaaaaaccgaaaacaaaaattgtttcaaacaggc 23249468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 827917 - 827840
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaact 495  Q
    |||||| |||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  827917 gactaaaactaaaacatgtaaaaagataactattgtgagaagaggacttgtatatttcaaaaaccgaaaacaaaaact 827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 19598457 - 19598367
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||| |||||||||||||| |  | ||||||| ||| || | |||||||||||||| ||||||||||||||||||||||||||||||    
T  19598457 gggactaaaactaaaacatgtaaaaagaaaactattttgagaaaatgacttgtatatttcgaaaactgaaaacaaaaactatttcaaacag 19598367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 41842868 - 41842789
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||| ||| |||| ||||||| || |||| ||||||||||||||||| |||||||||||||||||||||||    
T  41842868 actaaaacatgtaaaaga-taacaattgtgagaaaaggatttgtatatttcaaaaaccgaaaacaaaaactatttcaaaca 41842789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 44243696 - 44243787
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| | |||||||| ||| || ||||||||||| | |||| ||||||||||||||||||||| |||||||||  ||||||||||||||    
T  44243696 ggactaaaattaaaacatataaaaggataactattgtaagaagatgacttgtatatttcaaaaactaaaaacaaaatttatttcaaacaggc 44243787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 27733465 - 27733381
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| || ||||||||||||| |||||| ||||||||||||||       ||||||||||||||||||||||||    
T  27733465 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggtcttgtatatttcaa-------aaacaaaaactatttcaaacaggc 27733381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 457 - 505
Target Start/End: Original strand, 53584606 - 53584654
Alignment:
Q  457 aagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53584606 aagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 53584654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 506
Target Start/End: Complemental strand, 35749473 - 35749385
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||| |||||||||| ||| |  |||| |||| ||| |||| ||||||||||||||||||| |||||| ||||| ||||||||||||    
T  35749473 gactaaaactaaaacatataaaaagataattattatgagaagatgacttgtatatttcaaaaattgaaaataaaaattatttcaaacag 35749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 18503 - 18594
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||||| |||||||||||||| || ||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  18503 ggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactaaaaccaaaaactatttcaaacaggc 18594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 508
Target Start/End: Complemental strand, 67959 - 67870
Alignment:
Q  419 actaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    ||||| |||||||||||||| || ||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  67959 actaaaactaaaacatgtaaaaggataactattgttagaagaggacttgtatattttaaaaactgaaaacaaaaattatttcaaacaggc 67870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 508
Target Start/End: Complemental strand, 21566 - 21474
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| |||||||||||||| | |||||||||||||| |||| || || |||||||||||||||||||||||||||| ||||||||||||    
T  21566 gggactaaaactaaaacatgtaaaataataactattgtgagaagatgatttatatatttcaaaaactgaaaacaaaaactgtttcaaacaggc 21474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 8163644 - 8163732
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||| |||||||||||||| |  ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  8163644 gactaaaactaaaacatgtaaaaagataactattgtgagaagagaacttgtatatttcaaaaacagaaaacaaaaactatttcaaacag 8163732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 506
Target Start/End: Original strand, 40337065 - 40337155
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||| |||||||||||||| |  ||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  40337065 gggactaaaactaaaacatgtaaaatgataactattgtgagaagatgacttgcatatttcgaaaactgaaaacaaaaactatttcaaacag 40337155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 41326131 - 41326042
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||||||| || ||||||||||||| |||| || || ||||||||||||||| ||||||||||||||||||||||    
T  41326131 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaagatttatatatttcaaaaactcaaaacaaaaactatttcaaaca 41326042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 35589415 - 35589501
Alignment:
Q  425 actaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccct 511  Q
    ||||||| || ||| || ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  35589415 actaaaatatataaaaggataactattatgaaaagaggacttgtatatttcaaaaatcgaaaacaaaaactatttcaaaccggccct 35589501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 28089224 - 28089134
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactg-aaaacaaaaactatttcaaaca 505  Q
    |||||||| |||||||||||||| |  ||||||||||| | |||| || ||||||||||||||||||| |||||||||| | |||||||||    
T  28089224 gggactaaaactaaaacatgtaaaatgataactattgtaagaagatgatttgtatatttcaaaaactgaaaaacaaaaattgtttcaaaca 28089134  T

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Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 2362383 - 2362471
Alignment:
Q  418 gactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||| ||||||| | |||| |  ||||||||||||| |||| || |||||||||| |||||||||||||||||| | ||||||||||    
T  2362383 gactaaaactaaaataagtaaaatgataactattgtgagaagaagatttgtatattttaaaaactgaaaacaaaaattgtttcaaacag 2362471  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 43403210 - 43403266
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatat 472  Q
    |||||||| ||||||| |||||| || ||||||||| ||| ||||||||||||||||    
T  43403210 gggactaaaactaaaatatgtaaaaggataactattatgataagaggacttgtatat 43403266  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 505
Target Start/End: Complemental strand, 31637744 - 31637707
Alignment:
Q  468 tatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  31637744 tatattttaaaaactgaaaacaaaagctatttcaaaca 31637707  T

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Target: scaffold0532 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 11409 - 11320
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||| || ||||||||| | || ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11409 gggactaaaacaaaaacatgttaaaggataactactctgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 11320  T

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Target: scaffold0121 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 37402 - 37494
Alignment:
Q  416 gggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||| ||||||| |||||| |  |||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  37402 gggactaaaactaaaatatgtaaaatgataactattgcgagaagaggacttgtatatttcaaaaaccgaaaacaaacactatttcaaataggc 37494  T

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Target: scaffold1248 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 504
Target Start/End: Complemental strand, 1057 - 970
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    ||||||| |||||||||| ||| ||||||||||||  || || | ||||||||||||| |||||||||||||||||||||||||||||    
T  1057 ggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaac 970  T

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Target: scaffold0952 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 504
Target Start/End: Original strand, 1256 - 1343
Alignment:
Q  417 ggactaatactaaaacatgtaatagaataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    ||||||| |||||||||| ||| ||||||||||||  || || | ||||||||||||| |||||||||||||||||||||||||||||    
T  1256 ggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaac 1343  T

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