View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13176_high_10 (Length: 217)
Name: NF13176_high_10
Description: NF13176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13176_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 3331085 - 3331267
Alignment:
| Q |
17 |
atgcaataatgaaacaacataaaatgaagacgttaccttgaatccagaaacataaaatgtagtgtctcacatgctaaagcaagcctgattatggctgatc |
116 |
Q |
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| T |
3331085 |
atgcaataatgaaacaacataaaatgaagacgttaccttgaatccagaaacataaaatgtagtgtctcacaggctaaagcaagcctgattatggctgatc |
3331184 |
T |
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| Q |
117 |
atgcagatcaaatgcccatacatatgatcaagaaataattaacatgcaaaaatgagttttcaaacacttcgtcaagtgaatgc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
3331185 |
atgcagatcaaatgcccatacatatgatcaagaaataattaacatgcaaaaatgagttttcaaacacttcatcaagtgaatgc |
3331267 |
T |
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