View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13176_high_6 (Length: 267)
Name: NF13176_high_6
Description: NF13176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13176_high_6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 6 - 267
Target Start/End: Original strand, 37595306 - 37595567
Alignment:
| Q |
6 |
aggagcacagataatggagataatttgtttccttgcagatccacatgacactaattgatgtggcacttgtgcctcttacatagaaaattgaatatgaaac |
105 |
Q |
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| T |
37595306 |
aggagcacaaataatggagataatttgtttccttgcagatccacatgacactaattgatgtggcacttgtgcctcttacatagaaaattgaatatgaaac |
37595405 |
T |
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| Q |
106 |
acacaaaaatagaaaatggaatagtctagtgaatttgtgttaacctcgtaacaaatgtagcaaaaaagtacacagtttctttatggctatgccattaatt |
205 |
Q |
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| T |
37595406 |
acacaaaaatagaaaatggaatagtctagtgaatttgtgttaacctcataacaaatgtagcaaaaaagtacacagtttctttatggctatgccattaatt |
37595505 |
T |
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| Q |
206 |
ttgacacatacccttttgattgattttttgttctaagataaatgaaataaatcactaaaaga |
267 |
Q |
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| T |
37595506 |
ttgacacatacccttttgattgattttttgttctaagataaatgaaataaatcactaaaaga |
37595567 |
T |
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