View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1317R-Insertion-7 (Length: 425)
Name: NF1317R-Insertion-7
Description: NF1317R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1317R-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 8 - 425
Target Start/End: Original strand, 29086475 - 29086892
Alignment:
| Q |
8 |
atttatgtcctccatcacatgcatgttagttagctgatctgcataagcgcatcatgatgtacaatttcagggatttctcttggccaacctgtgacctgat |
107 |
Q |
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| T |
29086475 |
atttatgtcctcgatcacatgcatgttagttagctgatctgcataagcgcatcatgatgtacaatttcagggatttctcttggccaacctgtgacctgat |
29086574 |
T |
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| Q |
108 |
tgatttccatttggagaaagtaacttgtcaacttttttcactactcagtgctcaataatcgtgttttatcctctaaggacactcttgaaccccacatgca |
207 |
Q |
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| T |
29086575 |
tgatttccatttggagaaagtaacttgtcaacttttttcactactcagtgctcaataatcgtgttttatcctttaaggacacttttgaaccccacatgca |
29086674 |
T |
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| Q |
208 |
cttgccacgagtacaaaacactgagatcaatcattctagctggcatactacatatcaaaataatgatctggcttgataaaattgatttggcaaacttggt |
307 |
Q |
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| T |
29086675 |
cttgccacgagtacaaaacactgagatcaatcattctagctggcatactacatatcaaaataatgatctggcttgataaatttgatttggcaaacttggt |
29086774 |
T |
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| Q |
308 |
ttttattcaaagtgaaatttagtcaattaattttgttgtgatgatagtccaaggtaaacttattcttcaaattggattatggcataccaaatgtaaaact |
407 |
Q |
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| T |
29086775 |
ttttattcaaagtgaaatttagtcaattaattttagcgtgatgatagtccaaggtaaacttattcttcaaattggattttggcataccatatgcaaaact |
29086874 |
T |
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| Q |
408 |
aaacacagccaaatctgc |
425 |
Q |
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| T |
29086875 |
aaacacagccaaatctgc |
29086892 |
T |
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