View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1317_high_6 (Length: 543)

Name: NF1317_high_6
Description: NF1317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1317_high_6
NF1317_high_6
[»] chr4 (47 HSPs)
chr4 (14-330)||(31265978-31266294)
chr4 (412-521)||(31275258-31275368)
chr4 (412-482)||(42915107-42915178)
chr4 (415-483)||(51389431-51389500)
chr4 (412-482)||(36792444-36792516)
chr4 (412-481)||(28480427-28480497)
chr4 (412-481)||(28481301-28481371)
chr4 (412-481)||(28482176-28482246)
chr4 (412-482)||(31240760-31240832)
chr4 (412-481)||(6953276-6953347)
chr4 (234-317)||(31238239-31238321)
chr4 (412-482)||(31658031-31658102)
chr4 (412-482)||(55927096-55927167)
chr4 (412-481)||(5234360-5234430)
chr4 (412-484)||(22257082-22257155)
chr4 (54-228)||(31238039-31238210)
chr4 (412-482)||(39241190-39241262)
chr4 (412-482)||(4896388-4896459)
chr4 (412-459)||(9162178-9162225)
chr4 (412-482)||(25523084-25523155)
chr4 (412-482)||(46173649-46173720)
chr4 (413-481)||(1580171-1580241)
chr4 (412-481)||(15596508-15596578)
chr4 (412-466)||(38844395-38844449)
chr4 (419-482)||(1033267-1033331)
chr4 (415-482)||(36408092-36408160)
chr4 (415-482)||(36413215-36413283)
chr4 (412-482)||(48372113-48372185)
chr4 (412-482)||(24772783-24772854)
chr4 (412-482)||(47998706-47998776)
chr4 (412-482)||(51717172-51717243)
chr4 (412-481)||(16004216-16004285)
chr4 (412-480)||(5123480-5123549)
chr4 (412-480)||(29384087-29384156)
chr4 (412-453)||(49194995-49195036)
chr4 (415-459)||(525838-525882)
chr4 (412-475)||(36512954-36513018)
chr4 (412-483)||(52392113-52392184)
chr4 (424-483)||(53091113-53091177)
chr4 (412-482)||(36444283-36444354)
chr4 (60-110)||(31254650-31254699)
chr4 (251-317)||(31254768-31254834)
chr4 (414-478)||(41952942-41953008)
chr4 (412-466)||(53583033-53583087)
chr4 (419-483)||(10994040-10994105)
chr4 (412-448)||(47471912-47471948)
chr4 (412-486)||(48099922-48099997)
[»] chr5 (38 HSPs)
chr5 (412-482)||(20719903-20719974)
chr5 (412-481)||(39595386-39595456)
chr5 (412-480)||(125204-125273)
chr5 (412-483)||(11306808-11306880)
chr5 (412-482)||(2117528-2117599)
chr5 (412-482)||(33567127-33567198)
chr5 (412-477)||(31284287-31284353)
chr5 (412-481)||(24431507-24431577)
chr5 (412-481)||(10232611-10232682)
chr5 (412-459)||(34767329-34767376)
chr5 (412-481)||(12718269-12718339)
chr5 (430-482)||(9403643-9403696)
chr5 (412-484)||(27392588-27392661)
chr5 (412-476)||(34381124-34381189)
chr5 (412-482)||(5130265-5130337)
chr5 (412-481)||(3141608-3141678)
chr5 (412-459)||(4834941-4834988)
chr5 (412-482)||(11767878-11767949)
chr5 (412-481)||(12661835-12661906)
chr5 (412-482)||(19127236-19127307)
chr5 (412-459)||(28811540-28811587)
chr5 (412-481)||(12779495-12779565)
chr5 (415-483)||(17990329-17990398)
chr5 (412-453)||(19376050-19376091)
chr5 (414-480)||(3634608-3634675)
chr5 (412-478)||(13613855-13613923)
chr5 (412-482)||(21749470-21749542)
chr5 (419-481)||(9714024-9714087)
chr5 (412-451)||(11666291-11666330)
chr5 (420-481)||(16202840-16202903)
chr5 (412-482)||(33243629-33243700)
chr5 (414-445)||(33910014-33910045)
chr5 (412-486)||(36713062-36713137)
chr5 (412-484)||(40566102-40566176)
chr5 (412-442)||(42909831-42909861)
chr5 (412-482)||(6515327-6515397)
chr5 (412-484)||(14323854-14323927)
chr5 (412-453)||(17063977-17064018)
[»] chr3 (41 HSPs)
chr3 (412-481)||(29706015-29706085)
chr3 (412-484)||(7231892-7231965)
chr3 (412-482)||(11173562-11173633)
chr3 (412-482)||(46473240-46473311)
chr3 (412-485)||(41111957-41112031)
chr3 (412-482)||(20380777-20380848)
chr3 (412-484)||(6126566-6126640)
chr3 (412-481)||(19418049-19418119)
chr3 (415-484)||(49130969-49131039)
chr3 (419-482)||(31997921-31997986)
chr3 (412-459)||(5188348-5188395)
chr3 (413-482)||(44365179-44365250)
chr3 (412-481)||(28300535-28300605)
chr3 (412-482)||(32687847-32687919)
chr3 (412-482)||(9027985-9028056)
chr3 (412-482)||(51650466-51650540)
chr3 (412-466)||(37215136-37215190)
chr3 (412-481)||(37302963-37303033)
chr3 (412-483)||(43169641-43169712)
chr3 (412-485)||(47849782-47849856)
chr3 (261-318)||(16132210-16132267)
chr3 (412-480)||(28269918-28269987)
chr3 (412-481)||(32457642-32457714)
chr3 (414-481)||(3483233-3483301)
chr3 (413-457)||(30839570-30839614)
chr3 (61-173)||(16132379-16132488)
chr3 (412-477)||(31249214-31249281)
chr3 (414-457)||(32536855-32536897)
chr3 (412-481)||(33007472-33007543)
chr3 (412-481)||(41957625-41957695)
chr3 (412-481)||(42475866-42475936)
chr3 (415-453)||(44096488-44096526)
chr3 (412-484)||(7293985-7294058)
chr3 (412-453)||(35272139-35272180)
chr3 (414-482)||(37303497-37303566)
chr3 (435-483)||(46953084-46953133)
chr3 (412-482)||(3730956-3731028)
chr3 (412-475)||(24537331-24537394)
chr3 (413-445)||(24551153-24551185)
chr3 (412-483)||(51672975-51673047)
chr3 (412-482)||(55344183-55344255)
[»] chr1 (32 HSPs)
chr1 (412-481)||(40610341-40610411)
chr1 (412-459)||(36418191-36418238)
chr1 (412-459)||(37690527-37690574)
chr1 (412-481)||(2362481-2362551)
chr1 (412-484)||(46948091-46948164)
chr1 (412-482)||(22389414-22389484)
chr1 (412-482)||(50659080-50659151)
chr1 (412-483)||(39010926-39010998)
chr1 (412-459)||(5477075-5477122)
chr1 (412-482)||(28253127-28253198)
chr1 (413-482)||(48872839-48872909)
chr1 (412-481)||(36690461-36690531)
chr1 (412-481)||(36706562-36706632)
chr1 (412-484)||(51571540-51571611)
chr1 (412-484)||(30631731-30631804)
chr1 (412-482)||(49453592-49453660)
chr1 (412-481)||(31290097-31290167)
chr1 (412-453)||(50141853-50141894)
chr1 (412-448)||(28703048-28703084)
chr1 (412-477)||(7503577-7503644)
chr1 (413-482)||(15061958-15062029)
chr1 (412-481)||(31480023-31480094)
chr1 (412-482)||(34187376-34187447)
chr1 (412-459)||(50436257-50436303)
chr1 (424-484)||(5304716-5304778)
chr1 (412-482)||(18959115-18959188)
chr1 (412-445)||(10384640-10384673)
chr1 (412-453)||(16836032-16836073)
chr1 (412-480)||(35846209-35846278)
chr1 (412-482)||(14002629-14002701)
chr1 (415-459)||(31493994-31494038)
chr1 (412-448)||(38913700-38913736)
[»] chr2 (38 HSPs)
chr2 (412-484)||(11164262-11164335)
chr2 (412-482)||(3091853-3091924)
chr2 (412-482)||(36133086-36133157)
chr2 (414-481)||(14714100-14714168)
chr2 (412-478)||(12600160-12600227)
chr2 (412-482)||(13711173-13711244)
chr2 (412-482)||(22390264-22390335)
chr2 (412-485)||(2013170-2013244)
chr2 (412-483)||(7086011-7086083)
chr2 (412-484)||(19913896-19913970)
chr2 (412-481)||(23344878-23344948)
chr2 (414-459)||(36435795-36435840)
chr2 (412-483)||(12962498-12962570)
chr2 (412-451)||(6639392-6639431)
chr2 (412-482)||(13104591-13104662)
chr2 (412-482)||(32750110-32750181)
chr2 (412-459)||(39285965-39286012)
chr2 (412-482)||(42251808-42251879)
chr2 (412-481)||(11229210-11229280)
chr2 (412-481)||(14140228-14140298)
chr2 (412-477)||(25801704-25801770)
chr2 (412-481)||(29795548-29795618)
chr2 (412-475)||(45515494-45515558)
chr2 (412-481)||(12066021-12066095)
chr2 (412-482)||(23045273-23045344)
chr2 (412-482)||(31296731-31296802)
chr2 (412-459)||(43650459-43650506)
chr2 (412-481)||(5455342-5455412)
chr2 (412-481)||(34442225-34442295)
chr2 (412-445)||(1889259-1889292)
chr2 (412-484)||(39454133-39454206)
chr2 (412-476)||(43725317-43725382)
chr2 (415-447)||(15141577-15141609)
chr2 (413-445)||(18917737-18917769)
chr2 (412-482)||(26321585-26321656)
chr2 (412-444)||(30996824-30996856)
chr2 (412-482)||(34249692-34249764)
chr2 (412-482)||(44189939-44190008)
[»] chr8 (35 HSPs)
chr8 (412-483)||(28927793-28927865)
chr8 (412-482)||(23258144-23258215)
chr8 (415-482)||(40413251-40413319)
chr8 (412-489)||(14029123-14029202)
chr8 (412-481)||(7678844-7678914)
chr8 (412-466)||(22767242-22767296)
chr8 (412-481)||(40102135-40102205)
chr8 (412-483)||(21273597-21273669)
chr8 (412-481)||(21648819-21648890)
chr8 (412-481)||(37101574-37101645)
chr8 (412-482)||(41344557-41344628)
chr8 (413-482)||(42543368-42543439)
chr8 (412-484)||(11223745-11223818)
chr8 (412-484)||(44672119-44672192)
chr8 (413-484)||(45101509-45101581)
chr8 (412-452)||(27836292-27836332)
chr8 (412-482)||(30925542-30925613)
chr8 (412-459)||(26871156-26871203)
chr8 (412-478)||(38128418-38128485)
chr8 (412-482)||(5502472-5502545)
chr8 (412-453)||(426213-426254)
chr8 (412-482)||(34474061-34474134)
chr8 (412-484)||(37524314-37524387)
chr8 (415-482)||(3989020-3989088)
chr8 (412-464)||(24503029-24503081)
chr8 (412-444)||(42012515-42012547)
chr8 (412-459)||(896019-896066)
chr8 (412-481)||(3650225-3650296)
chr8 (412-451)||(42689897-42689936)
chr8 (414-483)||(1179490-1179560)
chr8 (412-484)||(4265509-4265583)
chr8 (412-481)||(5359450-5359520)
chr8 (412-445)||(26507829-26507862)
chr8 (412-448)||(16011840-16011876)
chr8 (412-482)||(44103877-44103949)
[»] chr7 (28 HSPs)
chr7 (412-481)||(12141996-12142066)
chr7 (412-481)||(5978691-5978761)
chr7 (412-481)||(2790289-2790360)
chr7 (412-482)||(34348915-34348986)
chr7 (412-482)||(37351878-37351949)
chr7 (412-481)||(40717127-40717198)
chr7 (412-482)||(46651784-46651855)
chr7 (420-481)||(10591272-10591334)
chr7 (412-481)||(44894363-44894433)
chr7 (412-482)||(7807168-7807238)
chr7 (412-484)||(33684792-33684865)
chr7 (415-482)||(48866818-48866886)
chr7 (424-482)||(8792488-8792546)
chr7 (181-228)||(14733403-14733450)
chr7 (412-459)||(43025919-43025966)
chr7 (412-482)||(43445519-43445590)
chr7 (412-481)||(5378739-5378809)
chr7 (412-484)||(6353840-6353914)
chr7 (412-466)||(12102614-12102668)
chr7 (412-481)||(25887695-25887765)
chr7 (412-482)||(43260101-43260174)
chr7 (414-481)||(21858861-21858929)
chr7 (412-482)||(155869-155940)
chr7 (413-477)||(19426693-19426758)
chr7 (412-481)||(21752770-21752840)
chr7 (412-480)||(21839023-21839092)
chr7 (412-480)||(47193039-47193108)
chr7 (416-483)||(30180623-30180691)
[»] chr6 (15 HSPs)
chr6 (412-482)||(34021060-34021131)
chr6 (412-481)||(32853033-32853103)
chr6 (412-482)||(1897798-1897869)
chr6 (412-482)||(16336958-16337029)
chr6 (412-482)||(9954660-9954732)
chr6 (412-482)||(32253892-32253964)
chr6 (412-482)||(30906551-30906622)
chr6 (414-459)||(2582776-2582821)
chr6 (412-480)||(24752343-24752412)
chr6 (412-483)||(26378272-26378344)
chr6 (412-445)||(29383669-29383702)
chr6 (412-453)||(31517098-31517139)
chr6 (435-478)||(2241718-2241762)
chr6 (412-486)||(22491913-22491988)
chr6 (412-482)||(28548908-28548980)
[»] scaffold0115 (1 HSPs)
scaffold0115 (412-482)||(15077-15147)
[»] scaffold0036 (1 HSPs)
scaffold0036 (412-482)||(18116-18186)
[»] scaffold0501 (1 HSPs)
scaffold0501 (412-466)||(10421-10475)
[»] scaffold0076 (1 HSPs)
scaffold0076 (412-459)||(11304-11351)
[»] scaffold0060 (1 HSPs)
scaffold0060 (412-481)||(6929-6999)
[»] scaffold0018 (1 HSPs)
scaffold0018 (412-482)||(36111-36185)
[»] scaffold0057 (1 HSPs)
scaffold0057 (412-481)||(38991-39061)
[»] scaffold0011 (1 HSPs)
scaffold0011 (412-445)||(219590-219623)
[»] scaffold0003 (1 HSPs)
scaffold0003 (412-482)||(119945-120016)
[»] scaffold0054 (1 HSPs)
scaffold0054 (412-453)||(31518-31559)
[»] scaffold0204 (1 HSPs)
scaffold0204 (420-482)||(27459-27523)
[»] scaffold0154 (1 HSPs)
scaffold0154 (412-452)||(9767-9807)
[»] scaffold0026 (1 HSPs)
scaffold0026 (412-483)||(113737-113809)


Alignment Details
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 14 - 330
Target Start/End: Original strand, 31265978 - 31266294
Alignment:
Q  14 agggtgggggaataatgaacaagttttcataaactaagattaagatgaaaccacctagctgaagtttgaaagataagttctagattccttttggggttnn 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  31265978 agggtgggggaataatgaacaagttttcctaaactaagattaagatgaaaccacctagctgaagtttgaaagataagttctagattccttttggggttaa 31266077  T
Q  114 nnnnntcaagtcatgctttggtatgtcaggtgttaaaagtaagaaaaaccactctaaacaattaacagttccatttccaagccaacagagtttgtccaat 213  Q
          || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31266078 aaaaagcaggtcatgctttggtatgtcaggtgttaaaagtaagaaaaaccactctaaacaattaacagttccatttccaagccaacagagtttgtccaat 31266177  T
Q  214 aaaacaaattgattccgaccagtcatagtagtcttattagtggagcaatttatttcatcaaccatactttaatattatggaatgaagttaaattagtaaa 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31266178 aaaacaaattgattccgactagtcatagtagtcttattagtggagcaatttatttcatcaaccatactttaatattatggaatgaagttaaattagtaaa 31266277  T
Q  314 ttgagaacccctttaaa 330  Q
    |||| ||||||||||||    
T  31266278 ttgaaaacccctttaaa 31266294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 412 - 521
Target Start/End: Original strand, 31275258 - 31275368
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt-caaatatcactactctatcagaaattgacattgaacaaatttag 510  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31275258 accaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactctatcagaaattgacattgaacaaatttag 31275357  T
Q  511 gtcaagatctt 521  Q
    |||||||||||    
T  31275358 gtcaagatctt 31275368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 42915178 - 42915107
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  42915178 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactct 42915107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 415 - 483
Target Start/End: Original strand, 51389431 - 51389500
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  51389431 aatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactgctcta 51389500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 36792444 - 36792516
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  36792444 accaatgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 36792516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 28480497 - 28480427
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||  |||| ||||||||||||||||    
T  28480497 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28480427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 28481371 - 28481301
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||  |||| ||||||||||||||||    
T  28481371 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28481301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 28482246 - 28482176
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||  |||| ||||||||||||||||    
T  28482246 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28482176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 31240760 - 31240832
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  31240760 accaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 31240832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 6953347 - 6953276
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||| ||||| ||||||||||||||||    
T  6953347 accaatgaaaagagagagaaaagaagttgtcaccaaaagttgtaagaaatggttgttcaaatatcactactc 6953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 31238239 - 31238321
Alignment:
Q  234 agtcatagtagtcttattagtggagcaatttatttcatcaaccatactttaatattatggaatgaagttaaattagtaaattga 317  Q
    |||||||||||||||| ||||| ||| | ||||||||||||||| || || |||||||| ||||||||| ||||||||||||||    
T  31238239 agtcatagtagtcttactagtgaagctacttatttcatcaaccacacgtttatattatgcaatgaagtt-aattagtaaattga 31238321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 31658031 - 31658102
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||    
T  31658031 accaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatcgctactct 31658102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 55927096 - 55927167
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||||||||||| ||||||||||| |||| ||||| || || |||||||||||||||||    
T  55927096 accaatgaaaagagagagaaaagaaattgtcacaaaaattgtctcaaatggatgttcaaatatcactactct 55927167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 5234430 - 5234360
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||| |||||||||| |||| || |||||||||||||||||||||| ||||| ||||||||||||||||    
T  5234430 accaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 22257155 - 22257082
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  22257155 accaatgaaaagagagagaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctat 22257082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 31238039 - 31238210
Alignment:
Q  54 taagatgaaaccacctagctgaagtttgaaagataagttctagattccttttggggttnnnnnnntcaagtcatgctttggtatgtcaggtgttaaaagt 153  Q
    ||||| ||||||||||| ||||||||||||||| |||||| |||||| |||||||||        |||  |||||||||||| || ||  | | ||||||    
T  31238039 taagacgaaaccaccta-ctgaagtttgaaagacaagttcaagattctttttggggt---aaaaatcatttcatgctttggtttggcaattataaaaagt 31238134  T
Q  154 aagaaaaaccactctaaacaatta-acagttccatttccaagccaacagagtttgtccaataaaacaaattgattc 228  Q
    ||||| |||||| ||||||| ||| ||| || ||||||| ||| ||| ||||||||||||||||| |||| |||||    
T  31238135 aagaacaaccacactaaacacttagacaatttcatttcccagcaaactgagtttgtccaataaaataaatggattc 31238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 39241262 - 39241190
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| | |||||||||||||||    
T  39241262 accaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactct 39241190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 4896459 - 4896388
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||  | || |||||||||||||||||    
T  4896459 accaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactct 4896388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 9162178 - 9162225
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9162178 accaatgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaa 9162225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 25523155 - 25523084
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||| | ||||| ||||||| |||||||||    
T  25523155 accaatgaaaagagagagaaaataagttatcacaaaagttgtctcatatggttgttcaaataacactactct 25523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 46173649 - 46173720
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggtt-gtcaaatatcactactct 482  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||| ||||  |||||||||| ||||||    
T  46173649 accaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatggttattcaaatatcattactct 46173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 1580241 - 1580171
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||| |||| |||||||||| ||||||||||| ||| ||||| ||||||||||||||||    
T  1580241 ccaatgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 1580171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 15596508 - 15596578
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||  |||| |||||||||||||||||||||||| | ||| ||||| ||||||||||||||||    
T  15596508 accaatgaaaaatgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactc 15596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 38844449 - 38844395
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt 466  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||    
T  38844449 accaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgt 38844395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 1033267 - 1033331
Alignment:
Q  419 aaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||| ||||| |||||||||||||||||||||||| | ||| ||||| |||||||||||||||||    
T  1033267 aaaaaagagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactct 1033331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 482
Target Start/End: Complemental strand, 36408160 - 36408092
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||  |||| ||||||||||| |||||    
T  36408160 aatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactct 36408092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 482
Target Start/End: Complemental strand, 36413283 - 36413215
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||  |||| ||||||||||| |||||    
T  36413283 aatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactct 36413215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 48372185 - 48372113
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||| |||  |||| |||||||||||||||||    
T  48372185 accaatgaaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactactct 48372113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 24772783 - 24772854
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||| |||||||||||||||||| ||||||||| |||||| ||||| || || ||||||||||| |||||    
T  24772783 accaataaaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgttcaaatatcaccactct 24772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 47998706 - 47998776
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||| ||| |||| ||||| ||||||||||||||||||| | ||| |||||||||||||||||    
T  47998706 accaatgaaaagaaagaaaaaa-aagttatcacaaaagttgtatcaaatgattgttcaaatatcactactct 47998776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 51717243 - 51717172
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| ||| | | ||| |||||||||||||||||    
T  51717243 accaatgaaaagagagaaaaaagaaattgtcacataagttgtctcatatgattgttcaaatatcactactct 51717172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 16004285 - 16004216
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||| |||||||||||| |||||| ||||| || || ||||||||||||||||    
T  16004285 accaatgaaaagagagaaaaaa-aagttgtcacaagagttgtctcaaatggatgttcaaatatcactactc 16004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 5123549 - 5123480
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    |||||| |||||||||| |||| ||||||||||||||||||| ||| | ||||| ||||||| |||||||    
T  5123549 accaattaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 5123480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 29384156 - 29384087
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    ||||||||||| ||||| || |||||||||||||| |||||||||| | | ||| |||||||||||||||    
T  29384156 accaatgaaaaaagagaaaatagaagttgtcacaagagttgtatcatatgattgttcaaatatcactact 29384087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 49194995 - 49195036
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  49194995 accaataaaaagagagagaaaagaagttgtcacataagttgt 49195036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 525838 - 525882
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||||| || |||||||||||||||| |||||    
T  525838 aatgaaaagagagagaaaaaaaattgtcacaaaagttgtctcaaa 525882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 475
Target Start/End: Original strand, 36512954 - 36513018
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacgg-ttgtcaaatatca 475  Q
    |||||| |||||||||||||||||||||||||||| | |||| ||||| || || ||||||||||    
T  36512954 accaataaaaagagagagaaaagaagttgtcacaagaattgtctcaaatggattttcaaatatca 36513018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 52392184 - 52392113
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttgtcaaatatcactactcta 483  Q
    ||||||||||  ||||| |||||||||||||| |||||||||||| ||| ||||||  |||||||||||||||    
T  52392184 accaatgaaagtagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgt-taatatcactactcta 52392113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 483
Target Start/End: Complemental strand, 53091177 - 53091113
Alignment:
Q  424 agagagaaaagaagttgtcacaaaagttgtatcaaacggttg-----tcaaatatcactactcta 483  Q
    ||||| |||||||||||||||||||||||||||||| || ||     ||||||||||||||||||    
T  53091177 agagaaaaaagaagttgtcacaaaagttgtatcaaatggatggttgttcaaatatcactactcta 53091113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 36444354 - 36444283
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||| ||||| || |||||||||||||| | |||||||| | | ||| |||||||||||||||||    
T  36444354 accaatgaaaaaagagaaaatagaagttgtcacaagaattgtatcatatgattgttcaaatatcactactct 36444283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 31254650 - 31254699
Alignment:
Q  60 gaaaccacctagctgaagtttgaaagataagttctagattccttttggggt 110  Q
    ||||||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  31254650 gaaaccaccta-ctgaagtttgaaagacaagttcaagattctttttggggt 31254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 31254768 - 31254834
Alignment:
Q  251 tagtggagcaatttatttcatcaaccatactttaatattatggaatgaagttaaattagtaaattga 317  Q
    ||||| ||| |||||||||||||||||  |||| ||| || | ||||||||| ||||||||||||||    
T  31254768 tagtgaagctatttatttcatcaaccacccttttatactacgcaatgaagttgaattagtaaattga 31254834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 478
Target Start/End: Original strand, 41952942 - 41953008
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcacta 478  Q
    ||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||| |||||||||||||    
T  41952942 caatgaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcacta 41953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 53583087 - 53583033
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt 466  Q
    |||||| |||| |||||||||| ||||||||||||||||||| ||| | ||||||    
T  53583087 accaattaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgt 53583033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 483
Target Start/End: Complemental strand, 10994105 - 10994040
Alignment:
Q  419 aaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    |||||||||||||||||||||||| || || |||| | ||| | ||| ||||||||||||||||||    
T  10994105 aaaagagagagaaaagaagttgtcgcataaattgtctaaaatgattgttcaaatatcactactcta 10994040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 47471912 - 47471948
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaa 448  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  47471912 accaataaaaagagagagaaaataagttgtcacaaaa 47471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 48099922 - 48099997
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttgtc-aaatatcactactctatca 486  Q
    |||||| |||||||| | |||| |||||||||| ||||||||||| ||| ||||||  |||||||||||||||||||    
T  48099922 accaataaaaagagaaaaaaaa-aagttgtcaccaaaagttgtatgaaatggttgtttaaatatcactactctatca 48099997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 20719974 - 20719903
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||    
T  20719974 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactct 20719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 39595386 - 39595456
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  39595386 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 125204 - 125273
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  125204 accaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 11306808 - 11306880
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  11306808 accaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactactcta 11306880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 2117599 - 2117528
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  2117599 accaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactct 2117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 33567198 - 33567127
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||    
T  33567198 accaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactct 33567127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 31284353 - 31284287
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcact 477  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  31284353 accaatgaaaagagagagaaaagaagttgtcgcaaaagttgtatgaaatggttgttcaaatatcact 31284287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 24431577 - 24431507
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||| ||||||||||||| |||||| ||||| ||||| ||||||||||||||||    
T  24431577 accaatgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatatcactactc 24431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 10232611 - 10232682
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| |||  |||| ||||||||||||||||    
T  10232611 accaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcactactc 10232682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 34767376 - 34767329
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  34767376 accaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaa 34767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 12718339 - 12718269
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||| ||||||||||||||||||||||| ||||   ||| ||||| ||||||||||||||||    
T  12718339 accaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttgttcaaatatcactactc 12718269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 9403643 - 9403696
Alignment:
Q  430 aaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  9403643 aaaagaagttgtcacaaaagttgtatcaaatggttgtttaaatatcactactct 9403696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 27392661 - 27392588
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||| | |||| ||||||||||||||||||| ||| | ||||| ||||||| |||||||||||    
T  27392661 accaatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactctat 27392588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 34381124 - 34381189
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcac 476  Q
    ||||||||||||||||| ||| ||||||||||||||| || ||||||| ||||| |||||||||||    
T  34381124 accaatgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatatcac 34381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 5130337 - 5130265
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||| |||  |||| |||||||||||||||||    
T  5130337 accaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactactct 5130265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 3141608 - 3141678
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  3141608 accaatgaaaagagaga-aaaaaaagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactc 3141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 4834988 - 4834941
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||    
T  4834988 accaatgaaaagagagagaaaagaagttatcacaagagttgtctcaaa 4834941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 11767949 - 11767878
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| |||||||||||||||||    
T  11767949 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 11767878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 12661906 - 12661835
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| |||  |||| ||||||||||| ||||    
T  12661906 accaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatagttgttcaaatatcaccactc 12661835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 19127236 - 19127307
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||  |||| ||||||||||||| |||||||||| | ||| ||||| |||||||||||||||||    
T  19127236 accaatgaaaaatgagaaaaaagaagttgtcgcaaaagttgtttaaaatggttgttcaaatatcactactct 19127307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 28811540 - 28811587
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  28811540 accaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaa 28811587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 12779565 - 12779495
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggtt-gtcaaatatcactactc 481  Q
    ||||||||||||| ||||||||||||||||||||||| ||||   ||| ||||  ||||||||||||||||    
T  12779565 accaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttattcaaatatcactactc 12779495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 415 - 483
Target Start/End: Original strand, 17990329 - 17990398
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||| ||| |||| |||| || |||||||||||||||| ||||||||||| | ||||||||||||||||    
T  17990329 aatgagaagtgagaaaaaataaattgtcacaaaagttgtctcaaacggttgtttaaatatcactactcta 17990398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 19376091 - 19376050
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  19376091 accaatgaaaagagagaaaaaagaagttgtcacataagttgt 19376050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 480
Target Start/End: Original strand, 3634608 - 3634675
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    |||||||||||||||||||| ||||||||| ||||||||||||  || ||||| |||||||||||||||    
T  3634608 caatgaaaagagagagaaaa-aagttgtcatcaaaagttgtatgtaatggttgttcaaatatcactact 3634675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 13613923 - 13613855
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcacta 478  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||| ||| | ||| |||||||||||||    
T  13613923 accaatgaaaagagagaaaaaagaaattgtcaccaaaagttgtatgaaatgattgttcaaatatcacta 13613855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 21749470 - 21749542
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||| ||| ||||| |||||||||||||||||    
T  21749470 accaatgaaaagagagaaaaaagaaattgtcaccaaaaattatataaaatggttgttcaaatatcactactct 21749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 481
Target Start/End: Complemental strand, 9714087 - 9714024
Alignment:
Q  419 aaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||| ||| || |||||||||||||| |||||||||| | ||||| ||||||||||||||||    
T  9714087 aaaagatagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 9714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 451
Target Start/End: Original strand, 11666291 - 11666330
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagtt 451  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  11666291 accaatgaaaagagagaaaaaagaagttgttacaaaagtt 11666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 481
Target Start/End: Original strand, 16202840 - 16202903
Alignment:
Q  420 aaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||| ||||||||||||||| ||||||||||| ||| | ||| ||||||||||||||||    
T  16202840 aaagagagaaaaaagaagttgtcactaaaagttgtatgaaatgattgttcaaatatcactactc 16202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 33243700 - 33243629
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||| || |||||||||||||| | | ||| ||||| |||||||||| ||||||    
T  33243700 accaatgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatcattactct 33243629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 33910045 - 33910014
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcaca 445  Q
    ||||||||||||||||||||||||||||||||    
T  33910045 caatgaaaagagagagaaaagaagttgtcaca 33910014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 36713137 - 36713062
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctatca 486  Q
    |||||||||||   ||| ||||||| ||||||||||| |||| | ||||||||| |||||||||| ||||||||||    
T  36713137 accaatgaaaaattagaaaaaagaaattgtcacaaaaattgtttaaaacggttgttcaaatatcattactctatca 36713062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 40566176 - 40566102
Alignment:
Q  412 accaatgaaaagagagagaa-aagaagttgtcacaaaagttgtatcaaacggttgt-caaatatcactactctat 484  Q
    ||||||||||||||||| || || ||||||| | ||||||||| ||||| || ||| ||||||||||||||||||    
T  40566176 accaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctat 40566102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 442
Target Start/End: Original strand, 42909831 - 42909861
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtc 442  Q
    |||||||||||||||||||||||||||||||    
T  42909831 accaatgaaaagagagagaaaagaagttgtc 42909861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 6515397 - 6515327
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||  || |||||| ||| |||||||| ||| ||||| |||||||||||||||||    
T  6515397 accaatgaaaagagagagaaa--aaattgtcaccaacagttgtatgaaatggttgttcaaatatcactactct 6515327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 14323927 - 14323854
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    |||||| ||||| |||| ||||||||||||  |||||||| | ||||| ||||| | |||||||||||||||||    
T  14323927 accaataaaaagtgagaaaaaagaagttgtaccaaaagttatctcaaaaggttgtttaaatatcactactctat 14323854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 17063977 - 17064018
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  17063977 accaatgaaaagagagagaaatgaggttgtcataaaagttgt 17064018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 29706015 - 29706085
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  29706015 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 7231965 - 7231892
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  7231965 accaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactctat 7231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 11173562 - 11173633
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| | ||||||    
T  11173562 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactct 11173633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 46473240 - 46473311
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||    
T  46473240 accaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactct 46473311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 485
Target Start/End: Complemental strand, 41112031 - 41111957
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctatc 485  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| || || ||||||||||||||||||||    
T  41112031 accaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctatc 41111957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 20380848 - 20380777
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||| |||| |||||||||||||||||||||||| | ||| ||||| |||||||||||||||||    
T  20380848 accaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactct 20380777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 6126566 - 6126640
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| |||||||||||| | |||||||||||| ||| ||||| |||||||||||||||||||    
T  6126566 accaatgaaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcactactctat 6126640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 19418119 - 19418049
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| || || ||||||||||| ||||    
T  19418119 accaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcaccactc 19418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 49130969 - 49131039
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| || || ||||||||||||| |||||    
T  49130969 aatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactagtctat 49131039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 31997921 - 31997986
Alignment:
Q  419 aaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||||    
T  31997921 aaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactct 31997986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 5188348 - 5188395
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  5188348 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtaccaaa 5188395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 44365250 - 44365179
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||| ||||||||||| |||||    
T  44365250 ccaatgaaaagagagagaaaagaagttgtcaccaaaaattgtataaaatggttgttcaaatatcaccactct 44365179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 28300605 - 28300535
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| || | |||||||||||| |||||||||| | ||||| ||||||||||||||||    
T  28300605 accaatgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 28300535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 32687919 - 32687847
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||  |||| |||||||||| ||||||    
T  32687919 accaatgaaaagagagaaaaaagaagttatcaccaaaagttgtatcaaatagttgttcaaatatcattactct 32687847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 9027985 - 9028056
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||| |||| ||||||||| ||||||||||||||| | |||||||| ||||| |||||||||||| ||||    
T  9027985 accaataaaaatagagagaaacgaagttgtcacaaaaatcgtatcaaatggttgttcaaatatcacttctct 9028056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 51650466 - 51650540
Alignment:
Q  412 accaatgaaaagagagag--aaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||| ||| ||||| ||||||||||| |||||    
T  51650466 accaatgaaaagagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcaccactct 51650540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 37215190 - 37215136
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt 466  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||| | ||||||    
T  37215190 accaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgt 37215136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 37303033 - 37302963
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||| | | ||| ||||||| ||||||||    
T  37303033 accaatgaaaagagagaaaaaagaaattgtcacaaaagttgtctcatatgcttgttcaaataacactactc 37302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 43169712 - 43169641
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttgt-caaatatcactactcta 483  Q
    ||||||||||||||||| ||||  ||||||||| ||||||||||| ||| |||||| |||||||||||||||||    
T  43169712 accaatgaaaagagagaaaaaa--agttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcta 43169641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 485
Target Start/End: Original strand, 47849782 - 47849856
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctatc 485  Q
    ||||||||||||||||| |||||| | |||||||| |||||| |||||  | || ||||||||||||||||||||    
T  47849782 accaatgaaaagagagaaaaaagaggctgtcacaagagttgtttcaaatagatgttcaaatatcactactctatc 47849856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 16132267 - 16132210
Alignment:
Q  261 atttatttcatcaaccatactttaatattatggaatgaagttaaattagtaaattgag 318  Q
    ||||||||| ||||||| ||||| ||||||  ||||||||||||||||||||| ||||    
T  16132267 atttatttcgtcaaccacacttttatattacagaatgaagttaaattagtaaactgag 16132210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 28269918 - 28269987
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    ||||||||||||| ||| ||||||||||||| |||||||||| ||| | ||||| ||||||| |||||||    
T  28269918 accaatgaaaagatagaaaaaagaagttgtcgcaaaagttgtctcatatggttgttcaaataacactact 28269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 32457714 - 32457642
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtc--acaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||||||||||  | |||| ||||||||||  |||| ||||||||||||||||    
T  32457714 accaatgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatcactactc 32457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 481
Target Start/End: Original strand, 3483233 - 3483301
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||| |||| ||||||||||| | ||||||||||| | ||| ||||||| ||||||||    
T  3483233 caatgaaaagagagaaaaaaaaagttgtcacagatgttgtatcaaatgattgttcaaataacactactc 3483301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 30839570 - 30839614
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtcacaaaagttgtatca 457  Q
    |||||||||||||||| || |||||||||||||| ||||||||||    
T  30839570 ccaatgaaaagagagaaaatagaagttgtcacaagagttgtatca 30839614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 16132488 - 16132379
Alignment:
Q  61 aaaccacctagctgaagtttgaaagataagttctagattccttttggggttnnnnnnntcaagtcatgctttggtatgtcaggtgttaaaagtaagaaaa 160  Q
    |||||||||| ||||||||||||||| |||||| |||||| |||||||||        ||| | |||||||||||||| || || | |||||||||||      
T  16132488 aaaccaccta-ctgaagtttgaaagacaagttcaagattctttttggggt--caaaaatcatgccatgctttggtatggcaagtataaaaagtaagaact 16132392  T
Q  161 accactctaaaca 173  Q
    |||||||||||||    
T  16132391 accactctaaaca 16132379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 31249281 - 31249214
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcact 477  Q
    ||||||||||||||| | |||| ||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  31249281 accaatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcact 31249214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 457
Target Start/End: Original strand, 32536855 - 32536897
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatca 457  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  32536855 caatgaaaagagagagaaaa-aagttgtcacataagttgtatca 32536897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 33007472 - 33007543
Alignment:
Q  412 accaatgaaaagagagagaaaa-gaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||| ||||||||||||||| |||| ||| | ||||| ||||||| ||||||||    
T  33007472 accaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtctcatatggttgttcaaataacactactc 33007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 41957625 - 41957695
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||| |||| ||||||| || ||||||||||||| | ||| ||||| | ||||||||||||||    
T  41957625 accaatgaaaagtgagaaaaaagaaattatcacaaaagttgtttaaaatggttgtttaaatatcactactc 41957695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 42475936 - 42475866
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||| ||||| ||||||||||||| | | | ||||| ||||||| ||||||||    
T  42475936 accaatgaaaagagagaaaaaataagttttcacaaaagttgtcttatatggttgttcaaataacactactc 42475866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 453
Target Start/End: Complemental strand, 44096526 - 44096488
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  44096526 aatgaaaagagagagaaaataagttgttacaaaagttgt 44096488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 7294058 - 7293985
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt-caaatatcactactctat 484  Q
    |||||||||||   ||| ||||||||||||  |||||||||| | ||| |||||| ||||||||||||||||||    
T  7294058 accaatgaaaaataagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactctat 7293985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 35272139 - 35272180
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    |||||| |||||||||| |||||||||||||||| |||||||    
T  35272139 accaataaaaagagagaaaaaagaagttgtcacataagttgt 35272180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 37303497 - 37303566
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||| |||| || |||||||||||||||| ||| |  |||| ||||||| |||||||||    
T  37303497 caatgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacactactct 37303566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 46953084 - 46953133
Alignment:
Q  435 aagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  46953084 aagttgtcataaaagttgtatcaaatagttgttcaaatatcactactcta 46953133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 3731028 - 3730956
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||| || |||||| |||| ||||| ||||| ||| | | |||||||||||||||    
T  3731028 accaatgaaaagagagagaaaataaattgtcaccaaacgttgtctcaaatggtcgttaaaatatcactactct 3730956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 475
Target Start/End: Original strand, 24537331 - 24537394
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatca 475  Q
    ||||||||||||| ||| ||||||||||||||| ||| |||||| ||| ||||| ||||||||||    
T  24537331 accaatgaaaagaaagaaaaaagaagttgtcactaaa-ttgtataaaatggttgttcaaatatca 24537394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 24551185 - 24551153
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtcaca 445  Q
    |||||||||||||||| ||||||||||||||||    
T  24551185 ccaatgaaaagagagaaaaaagaagttgtcaca 24551153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 51672975 - 51673047
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    |||||||||||  || | ||||||||||||  |||||||||| | ||| ||||| ||||||||||||||||||    
T  51672975 accaatgaaaactgaaaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactcta 51673047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 55344255 - 55344183
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaa-gttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| || | ||||||||| |||| ||||||| |||  |||| |||||||||||||||||    
T  55344255 accaatgaaaagagagaaaagaaaagttgtcataaaatgttgtatgaaatagttgttcaaatatcactactct 55344183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 40610341 - 40610411
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||    
T  40610341 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactc 40610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 36418191 - 36418238
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36418191 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 36418238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 37690527 - 37690574
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37690527 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 37690574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 2362481 - 2362551
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||  |||| ||||||||||||||||    
T  2362481 accaatgaaaaaagagagaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 2362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 46948091 - 46948164
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||| || || |||||||||||||||||||    
T  46948091 accaatgaaaagatagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcactactctat 46948164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 22389484 - 22389414
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||    
T  22389484 accaatgaaaagagagaaaaaagaagttgtcacaaaagttg-atcaaatggttgttcaaatatcattactct 22389414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 50659151 - 50659080
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||||    
T  50659151 accaatgaaaagagagagaaaagaagttgtcacataagttgtttcatatggttgttcaaataacactactct 50659080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 39010926 - 39010998
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||| | ||||| ||||||| ||||||||||    
T  39010926 accaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactcta 39010998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 5477122 - 5477075
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  5477122 accaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 5477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 28253127 - 28253198
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||| ||| |||||    
T  28253127 accaatgaaaagagagagaaaagaagttgttacaaaagttgtctcatatggttgttcaaataacaccactct 28253198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 48872909 - 48872839
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  48872909 ccaatgaaaagagagagaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 48872839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 36690531 - 36690461
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||| ||||||| ||||||||    
T  36690531 accaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 36690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 36706632 - 36706562
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||| ||||||| ||||||||    
T  36706632 accaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 36706562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 51571540 - 51571611
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  51571540 accaatgaaaagagaaa--aaagaagttgtcacaaaagttgtattaaatggttgttcaaatatcacaactctat 51571611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 30631804 - 30631731
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| |||||||||||||||||||    
T  30631804 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactctat 30631731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 49453592 - 49453660
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||  |||| |||||||||||||||||    
T  49453592 accaatgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatagttgttcaaatatcactactct 49453660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 31290167 - 31290097
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||| ||||| |||| ||||||||||||||||||| | ||| ||||| ||||||||||| ||||    
T  31290167 accaatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatcaccactc 31290097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 50141894 - 50141853
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  50141894 accaatgaaaagagagagaaaataaattgtcacaaaagttgt 50141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 28703084 - 28703048
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaa 448  Q
    |||||||||||||||||||||| ||||||||||||||    
T  28703084 accaatgaaaagagagagaaaataagttgtcacaaaa 28703048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 7503577 - 7503644
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcact 477  Q
    ||||||||||||||||| |||| || |||||| |||||||||||| ||| ||||| ||||||||||||    
T  7503577 accaatgaaaagagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgttcaaatatcact 7503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 15061958 - 15062029
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttgt-caaatatcactactct 482  Q
    ||||| |||||||||| |||| |||||||||| ||||||| ||| ||| |||||| ||||||||||||||||    
T  15061958 ccaataaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcactactct 15062029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 31480094 - 31480023
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||| |||  |||| ||||||||||||||||    
T  31480094 accaatgaaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgttcaaatatcactactc 31480023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 34187376 - 34187447
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| || ||||||||||||| || |||| ||| | ||||| |||||||||||| ||||    
T  34187376 accaatgaaaagagagaaaagagaagttgtcacataaattgtctcacatggttgttcaaatatcactcctct 34187447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 50436257 - 50436303
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||    
T  50436257 accaatgaaaa-agagaataaagaagttgtcacaaaagttgtatcaaa 50436303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 484
Target Start/End: Complemental strand, 5304778 - 5304716
Alignment:
Q  424 agagagaaaagaagttgtcac-aaaagttgtatcaaacggttgt-caaatatcactactctat 484  Q
    |||||||||| |||||||||| |||| |||||| ||| |||||| ||||||||||||||||||    
T  5304778 agagagaaaaaaagttgtcaccaaaaattgtatgaaatggttgttcaaatatcactactctat 5304716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 18959115 - 18959188
Alignment:
Q  412 accaatgaaaagagag-agaaaagaagttgtcacaaaagttgtatcaaacggttgt--caaatatcactactct 482  Q
    |||||||||||||||| |||||| || ||||| ||||| |||||||||| ||||||   |||||||||||||||    
T  18959115 accaatgaaaagagagaagaaaaaaaattgtcgcaaaaattgtatcaaatggttgttcaaaatatcactactct 18959188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 10384640 - 10384673
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcaca 445  Q
    |||||||||||||| |||||||||||||||||||    
T  10384640 accaatgaaaagagtgagaaaagaagttgtcaca 10384673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 16836073 - 16836032
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    ||||||||||||  ||| ||||||||||||||||||||||||    
T  16836073 accaatgaaaagtaagaaaaaagaagttgtcacaaaagttgt 16836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 35846278 - 35846209
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| |||||||| ||||||    
T  35846278 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatgactact 35846209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 14002701 - 14002629
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttg-tatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||| ||| |||||| |||||||| || ||||  |||| |||||||||||||||||    
T  14002701 accaatgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaatagttgttcaaatatcactactct 14002629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 31493994 - 31494038
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||||||||| || | |||||||||||||||||| ||||||||||    
T  31493994 aatgaaaagaaagggtaaagaagttgtcacaaaaattgtatcaaa 31494038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 38913700 - 38913736
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaa 448  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  38913700 accaatgaaaagagagagaaaataagttatcacaaaa 38913736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 11164335 - 11164262
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  11164335 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctat 11164262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 3091853 - 3091924
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||   ||| |||||||||||||||||    
T  3091853 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactct 3091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 36133086 - 36133157
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  36133086 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactct 36133157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 481
Target Start/End: Original strand, 14714100 - 14714168
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| || || ||||||||||||||||    
T  14714100 caatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactactc 14714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 12600160 - 12600227
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcacta 478  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||  |||| |||||||||||||    
T  12600160 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcacta 12600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 13711173 - 13711244
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||||||||||||||||||  |||  |||| |||||||||||||||||    
T  13711173 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactactct 13711244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 22390264 - 22390335
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| || || ||||||||| |||||||    
T  22390264 accaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatctctactct 22390335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 485
Target Start/End: Complemental strand, 2013244 - 2013170
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctatc 485  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||| || || | ||||||||||||||||||    
T  2013244 accaatgaaaagagagagaaaataagttgtcacaagagttgtctcaaatggatgttaaaatatcactactctatc 2013170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 7086083 - 7086011
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||| | ||||| ||||||| ||||||||||    
T  7086083 accaatgaaaagagagagaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactcta 7086011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 19913896 - 19913970
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| |||| ||||||||| | |||||||||| ||| ||||| |||||||||||||||||||    
T  19913896 accaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgttcaaatatcactactctat 19913970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 23344948 - 23344878
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||| |  || ||||||||||||||||    
T  23344948 accaatgaaaagagagagaaaagaagttgtcagaagagttgtctcaaatgaatgttcaaatatcactactc 23344878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 36435795 - 36435840
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||    
T  36435795 caatgaaaagagagagaaaagaggttgtcacaaaagttgtttcaaa 36435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 12962498 - 12962570
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    |||||| |||||||||||||||||| |||| |||||| || |||||||  |||| ||||||||||||||||||    
T  12962498 accaattaaaagagagagaaaagaaattgttacaaaatttatatcaaatagttgttcaaatatcactactcta 12962570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 451
Target Start/End: Complemental strand, 6639431 - 6639392
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagtt 451  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  6639431 accaatgaaaagagagagaaaagaagttgtcacataagtt 6639392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 13104591 - 13104662
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||| |||||||||||||| |||| ||| | ||||| ||||||| |||||||||    
T  13104591 accaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactct 13104662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 32750110 - 32750181
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||| |||||||||||||| |||| ||| | ||||| ||||||| |||||||||    
T  32750110 accaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactct 32750181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 39285965 - 39286012
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  39285965 accaataaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaa 39286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 42251879 - 42251808
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||||||||||||| |||||||  |||| | ||| | |||||||||||||||    
T  42251879 accaatgaaaagagagaaaaaagaagttgtcacataagttgttccaaatgattgtttaaatatcactactct 42251808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 11229280 - 11229210
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| ||||||||||||||||    
T  11229280 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 11229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 14140298 - 14140228
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||| |||||||||||||| | | ||| | ||| ||||||||||||||||    
T  14140298 accaatgaaaagagagaaaaaagaaattgtcacaaaagttattttaaatgattgttcaaatatcactactc 14140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 25801770 - 25801704
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcact 477  Q
    ||||||||||||||||| |||||||||  ||||||||||||| |||||  |||| ||||||||||||    
T  25801770 accaatgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatatcact 25801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 29795548 - 29795618
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||  ||||||||||||||||| |||||  | || ||||||||||||||||    
T  29795548 accaatgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatatcactactc 29795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 475
Target Start/End: Complemental strand, 45515558 - 45515494
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatca 475  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||||||||    
T  45515558 accaatgaaaagagaga-aaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatca 45515494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 12066021 - 12066095
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagtt---gtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||||||||||| ||||||||   |||||||  ||||| ||||||||||||||||    
T  12066021 accaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtggtatcaattggttgttcaaatatcactactc 12066095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 23045273 - 23045344
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||| ||||| |||||||||||||||| ||||||| |||   ||||| ||||||| |||||||||    
T  23045273 accaatgaaaatagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactct 23045344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 31296802 - 31296731
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggtt-gtcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||| |||||||| |||||||  || | ||||  |||||||||||||||||    
T  31296802 accaatgaaaagagagaaaaaagaaattgtcacataagttgtcccatatggttattcaaatatcactactct 31296731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 43650506 - 43650459
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||||| |||||||||| ||||||| |||||||| |||||||||||||    
T  43650506 accaataaaaagagagaaaaaagaaattgtcacataagttgtatcaaa 43650459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 5455412 - 5455342
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||| ||  | |||||||||||| ||| ||||| |||||||| |||||||    
T  5455412 accaatgaaaagagagaaaaaagaaattaccccaaaagttgtataaaatggttgttcaaatattactactc 5455342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 34442225 - 34442295
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||| ||||||||||||||||| ||||||| |||| |||| |||||  | || ||||||||||||||||    
T  34442225 accaataaaaagagagagaaaagaggttgtcagaaaaattgtttcaaatagatgttcaaatatcactactc 34442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 1889259 - 1889292
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcaca 445  Q
    ||||||||||||||||| ||||||||||||||||    
T  1889259 accaatgaaaagagagaaaaaagaagttgtcaca 1889292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 39454206 - 39454133
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| ||||||  ||||| ||||| |||| |||||  | || |||||||||||||||||||    
T  39454206 accaatgaaaagagagaaaaaagagattgtctcaaaacttgtttcaaatagatgttcaaatatcactactctat 39454133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 43725317 - 43725382
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcac 476  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| |||||||||||    
T  43725317 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcac 43725382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 15141577 - 15141609
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaa 447  Q
    |||||||||||||||||||||||||||| ||||    
T  15141577 aatgaaaagagagagaaaagaagttgtctcaaa 15141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 18917737 - 18917769
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtcaca 445  Q
    |||||||||||||||| ||||||||||||||||    
T  18917737 ccaatgaaaagagagaaaaaagaagttgtcaca 18917769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 26321656 - 26321585
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||| ||||| ||| |||||||||||| ||| | ||| |||||||||||||||||    
T  26321656 accaatgaaaagagaga-aaaaaaagttatcaccaaaagttgtatgaaatgattgttcaaatatcactactct 26321585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 30996824 - 30996856
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac 444  Q
    |||||| ||||||||||||||||||||||||||    
T  30996824 accaataaaaagagagagaaaagaagttgtcac 30996856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 34249692 - 34249764
Alignment:
Q  412 accaatgaaaagagag-agaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||| | |||| |||||||||||||| |||| ||| | ||||| ||||||| |||||||||    
T  34249692 accaatgaaaagagagaaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactct 34249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 44189939 - 44190008
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||  |||||||| |||||||||| |||||| || || || || |||||||||||||||||    
T  44189939 accaatgaaaagag--agaaaagatgttgtcacaagagttgtctcgaatggatgttcaaatatcactactct 44190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 28927793 - 28927865
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||| ||||||    
T  28927793 accaatgaaaagagagagaaaagaagttgtcacaaaaattttatcaaatggttgttcaaatatcaccactcta 28927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 23258144 - 23258215
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||    
T  23258144 accaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactct 23258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 482
Target Start/End: Complemental strand, 40413319 - 40413251
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||    
T  40413319 aatgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactactct 40413251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 14029202 - 14029123
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactctatcagaa 489  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| | ||||||||||||||||| ||||    
T  14029202 accaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactctattagaa 14029123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 7678844 - 7678914
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  |||| |||||||||| |||||    
T  7678844 accaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 466
Target Start/End: Original strand, 22767242 - 22767296
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt 466  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  22767242 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtctcatacggttgt 22767296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 40102135 - 40102205
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| | ||||| ||||||| ||||||||    
T  40102135 accaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 40102205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 21273669 - 21273597
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||||||||||| || | ||||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  21273669 accaatgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactcta 21273597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 21648890 - 21648819
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| | ||||||||||||||    
T  21648890 accaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactc 21648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 37101645 - 37101574
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||||    
T  37101645 accaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactactc 37101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 41344628 - 41344557
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||| ||| || |||||| ||||| || || |||||||||||||||||    
T  41344628 accaatgaaaagagagagaaaagaagttatcataagagttgtctcaaatggatgttcaaatatcactactct 41344557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 42543439 - 42543368
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| |||| ||||||||||||    
T  42543439 ccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaattatcactactct 42543368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 11223818 - 11223745
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    |||||||||||| |||| ||||||||||||  |||||||||| ||||| | ||| |||||||||||||||||||    
T  11223818 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctcaaaagattgttcaaatatcactactctat 11223745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 44672192 - 44672119
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||   ||| ||||||||||||| |||||    
T  44672192 accaatgaaaagagagaaaaaagaatgtgtcacaaaagttgtatcaaataattgttcaaatatcactattctat 44672119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 45101509 - 45101581
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttgt-caaatatcactactctat 484  Q
    |||||||||||||||| |||| |||||||||| ||||||||||| ||| |||||| ||||||||||||||||||    
T  45101509 ccaatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctat 45101581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 452
Target Start/End: Original strand, 27836292 - 27836332
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttg 452  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  27836292 accaatgaaaagagagagaaaagaagttgtcacataagttg 27836332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 30925613 - 30925542
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  30925613 accaatgaaaagagaga-aaaaaaagttgtcaccaaaagttgtataaaatggttgttcaaatatcactactct 30925542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 26871156 - 26871203
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  26871156 accaatgaaaagagagagaaaagaaattgtcacaagagttgtctcaaa 26871203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 38128485 - 38128418
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcacta 478  Q
    |||||||||||| |||| ||||||||||||||||||| |||| | ||| ||||| |||||||||||||    
T  38128485 accaatgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatatcacta 38128418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 5502472 - 5502545
Alignment:
Q  412 accaatgaaaaga--gagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||  |||||| ||||||||||||||||| || ||||||| | ||| |||||||||||||||||    
T  5502472 accaatgaaaagatagagagagaagaagttgtcacaaaaattatatcaaatgattgttcaaatatcactactct 5502545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 426213 - 426254
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  426213 accaatgaaaagagagaaaaaagaagttgtcacataagttgt 426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 34474061 - 34474134
Alignment:
Q  412 accaatgaaaagagagag-aaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||| ||||| |||||||||| ||||||    
T  34474061 accaatgaaaaaagagagaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcattactct 34474134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 37524387 - 37524314
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||||||| |||||| ||||||||||| ||| | |||||  | || |||||||||||||||||||    
T  37524387 accaatgaaaagagagaaaaaagaggttgtcacaaaggttatttcaaatagatgttcaaatatcactactctat 37524314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 482
Target Start/End: Original strand, 3989020 - 3989088
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||| |||||||||||||||| ||||||| |||   ||||| ||||||| |||||||||    
T  3989020 aatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactct 3989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 24503029 - 24503081
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggtt 464  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| ||||| ||||    
T  24503029 accaatgaaaagagagaaaaatgaagttgtcataaaagttgtctcaaatggtt 24503081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 42012547 - 42012515
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac 444  Q
    |||||||||||||||||||||||||||||||||    
T  42012547 accaatgaaaagagagagaaaagaagttgtcac 42012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 896019 - 896066
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||| |||||||||||| | ||||||||| |||||    
T  896019 accaatgaaaagagagaaaaaagaagttgttaaaaaagttgtctcaaa 896066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 3650225 - 3650296
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||| || |||||| |||||||| | ||||| ||||| | ||||||||||||||    
T  3650225 accaatgaaaagagagagaaaataaattgtcaccaaaagttatctcaaatggttgttaaaatatcactactc 3650296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 451
Target Start/End: Original strand, 42689897 - 42689936
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagtt 451  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  42689897 accaatgaaaagagagaaaaaagaaattgtcacaaaagtt 42689936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 1179490 - 1179560
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||| ||| | |||| ||||||||||||||||| |||||||  |||| | ||||||||||||||||    
T  1179490 caatgaaaaaagaaaaaaaaaaagttgtcacaaaagttatatcaaatagttgtttaaatatcactactcta 1179560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 4265583 - 4265509
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt-atcaaacggttgtc-aaatatcactactctat 484  Q
    |||||| ||||| ||||||||  || |||||||||||||||| |||||| ||||||| ||||||||||| |||||    
T  4265583 accaatcaaaagcgagagaaataaaattgtcacaaaagttgtcatcaaatggttgtcaaaatatcactagtctat 4265509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 5359450 - 5359520
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||| |||||||||| ||||||  |||||||||||||||| |||||  | || ||||||||||||||||    
T  5359450 accaataaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 26507862 - 26507829
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcaca 445  Q
    ||||||||||||||||| ||||||||||||||||    
T  26507862 accaatgaaaagagagaaaaaagaagttgtcaca 26507829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 16011876 - 16011840
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaa 448  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  16011876 accaatgaaaagagagaaaaaagaaattgtcacaaaa 16011840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 44103877 - 44103949
Alignment:
Q  412 accaatgaaaagagagag-aaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||| |||| ||||| |||||| |||| | | ||| ||||| |||||||||||||||||    
T  44103877 accaatgaaaagagagagaaaaaaaagttatcacaatagttatcttaaatggttgttcaaatatcactactct 44103949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 12141996 - 12142066
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  12141996 accaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 5978691 - 5978761
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| || |||||||||||||| |||||||||| | ||||| ||||||||||||||||    
T  5978691 accaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 5978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 2790289 - 2790360
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacg-gttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||| | |||| ||||||||||||||||    
T  2790289 accaatgaaaagagagagaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactc 2790360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 34348986 - 34348915
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||  | || |||||||||||||||||    
T  34348986 accaatgaaaagagagagaaaagaagttgttaaaaaagttgtatgaaatagatgttcaaatatcactactct 34348915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 37351949 - 37351878
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||| |||||||||| ||||||| |||||||||||||| ||||||| | ||| |||||||||||||||||    
T  37351949 accaataaaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactactct 37351878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 40717198 - 40717127
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||    
T  40717198 accaataaaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 40717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 46651784 - 46651855
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| || |||||||||||||| | |||||||| | ||||| |||||||||||||||||    
T  46651784 accaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactactct 46651855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 481
Target Start/End: Original strand, 10591272 - 10591334
Alignment:
Q  420 aaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||| |||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  10591272 aaagtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatatcactactc 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 44894433 - 44894363
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||||||||||||||| || | ||||| || || ||||||||||||||||    
T  44894433 accaatgaaaagagagataaaagaagttgtcacaaaaattatctcaaatggatgttcaaatatcactactc 44894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 7807168 - 7807238
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||  |||||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  7807168 accaatgaaaagag--agaaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactct 7807238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 33684792 - 33684865
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactctat 484  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| |  |||| ||||||| |||||||||||    
T  33684792 accaatgaaaagatagaaaaaagaagttgtcacaaaagttgtttcatatagttgttcaaataacactactctat 33684865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 482
Target Start/End: Complemental strand, 48866886 - 48866818
Alignment:
Q  415 aatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||  | || |||||||||||||||||    
T  48866886 aatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactct 48866818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 482
Target Start/End: Complemental strand, 8792546 - 8792488
Alignment:
Q  424 agagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  8792546 agagagaaaa-aagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactct 8792488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 14733403 - 14733450
Alignment:
Q  181 gttccatttccaagccaacagagtttgtccaataaaacaaattgattc 228  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  14733403 gttccatttcccagcaaacagagtttgtccaataaaataaattgattc 14733450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 43025919 - 43025966
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  43025919 accattgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaa 43025966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 43445519 - 43445590
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||| |||||| ||| ||||||| ||||||||||| |||||||||| | ||| |||||||||||||||||    
T  43445519 accaataaaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactactct 43445590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 5378739 - 5378809
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||||||||||| |||| | ||||||||| ||||| || || | ||||||||||||||    
T  5378739 accaatgaaaagagagagaaaagaaattgttaaaaaagttgtctcaaatggatgtttaaatatcactactc 5378809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 6353840 - 6353914
Alignment:
Q  412 accaatgaaaagagagagaaaa-gaagttgtcacaaaagttgtatcaaa-cggttgtcaaatatcactactctat 484  Q
    ||||||||||| ||||| |||| ||| ||||||||||||||||||||||  | || |||||||||||||||||||    
T  6353840 accaatgaaaaaagagaaaaaaagaaattgtcacaaaagttgtatcaaatagtttttcaaatatcactactctat 6353914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 12102668 - 12102614
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt 466  Q
    ||||||||||||||||| |||| ||||||||||||||||||| | ||| ||||||    
T  12102668 accaatgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgt 12102614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 25887695 - 25887765
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| ||||||||||||||||    
T  25887695 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 25887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 43260101 - 43260174
Alignment:
Q  412 accaatgaaaagagagag-aaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||| ||| ||||| |||||||| ||||||||    
T  43260101 accaattaaaagagagagaaaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatgactactct 43260174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 481
Target Start/End: Original strand, 21858861 - 21858929
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||| || | |||||||||| ||||||||||||| | ||| ||||| ||||||||||||||||    
T  21858861 caatgaaaagtgaaaaaaaagaagttatcacaaaagttgtttaaaatggttgttcaaatatcactactc 21858929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 155940 - 155869
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||  ||| ||||||||||||  |||||||||| | ||| ||||| |||||||||||||||||    
T  155940 accaatgaaaagtaagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 155869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 477
Target Start/End: Original strand, 19426693 - 19426758
Alignment:
Q  413 ccaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcact 477  Q
    |||||||||||||||| |||| ||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  19426693 ccaatgaaaagagaga-aaaaaaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcact 19426758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 21752770 - 21752840
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| |||| || |||||||||||||||| ||| |  |||| ||||||| ||||||||    
T  21752770 accaatgaaaagagagaaaaaataaattgtcacaaaagttgtttcatattgttgttcaaataacactactc 21752840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 21839092 - 21839023
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    ||||||||||| ||||| |||| || |||| |||||| ||||||||||  |||| |||||||||||||||    
T  21839092 accaatgaaaaaagagaaaaaataaattgttacaaaaattgtatcaaatagttgttcaaatatcactact 21839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 47193039 - 47193108
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    |||||||||||| |||| ||||||||||||  |||||||| | | ||| ||||| |||||||||||||||    
T  47193039 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatggttgttcaaatatcactact 47193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 30180623 - 30180691
Alignment:
Q  416 atgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||||||| |||||| |||||| ||||| |||| |||||  | || ||||||||||||||||||    
T  30180623 atgaaaagagagaaaaaagaggttgtcgcaaaaattgtttcaaatagatgttcaaatatcactactcta 30180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 34021131 - 34021060
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| || || |||||||||||||||||    
T  34021131 accaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 34021060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 32853103 - 32853033
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||||||  |||| ||||||||||||||||    
T  32853103 accaatgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 32853033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 1897798 - 1897869
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||  | || |||||||||||||||||    
T  1897798 accaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactct 1897869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 16337029 - 16336958
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||| || || |||||||||| ||||||    
T  16337029 accaatgaaaagagagagaatagaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactct 16336958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 9954660 - 9954732
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| | |||||||||||| |||||||||||| ||| ||||| |||||||||||| ||||    
T  9954660 accaatgaaaagagagaaagaagaagttgtcaccaaaagttgtattaaatggttgttcaaatatcactcctct 9954732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 32253892 - 32253964
Alignment:
Q  412 accaatgaaaagagagag-aaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||||||||||||||| |||| || ||||||||||||||||| ||||  |||| |||||||||||||||||    
T  32253892 accaatgaaaagagagagaaaaaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatcactactct 32253964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 30906622 - 30906551
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    |||||| |||||||||||||||||| |||||| || |||||| ||||| || || |||||||||||||||||    
T  30906622 accaataaaaagagagagaaaagaaattgtcataagagttgtttcaaatggatgttcaaatatcactactct 30906551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 2582776 - 2582821
Alignment:
Q  414 caatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||    
T  2582776 caatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaa 2582821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 24752343 - 24752412
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactact 480  Q
    |||||||||||| |||| ||||||||||||  |||||||||| | ||| ||||| |||||||||||||||    
T  24752343 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 24752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 26378344 - 26378272
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    |||||||||||  |||| ||||||||||||  |||||||||| | ||| ||||| ||||||||||||||||||    
T  26378344 accaatgaaaaatgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactcta 26378272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 29383669 - 29383702
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcaca 445  Q
    ||||||||||||||||| ||||||||||||||||    
T  29383669 accaatgaaaagagagaaaaaagaagttgtcaca 29383702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 31517139 - 31517098
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    |||||| |||||||||| |||||||||||||||| |||||||    
T  31517139 accaataaaaagagagaaaaaagaagttgtcacataagttgt 31517098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 478
Target Start/End: Complemental strand, 2241762 - 2241718
Alignment:
Q  435 aagttgtcacaaaagttgtatcaaacggttg-tcaaatatcacta 478  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  2241762 aagttatcacaaaagttgtatcaaatggttgttcaaatatcacta 2241718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 22491988 - 22491913
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacg-gttg-tcaaatatcactactctatca 486  Q
    |||||| |||||||||| |||||||||||||||| ||||| | | ||| | |||| |||||||||||||||||||||    
T  22491988 accaatcaaaagagaga-aaaagaagttgtcacataagttttctaaaatgagttgttcaaatatcactactctatca 22491913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 28548980 - 28548908
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||| | |||| ||||||||| |||||||||||| ||| ||||| ||||||| || ||||||    
T  28548980 accaatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtataaaatggttgttcaaataacattactct 28548908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 15147 - 15077
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||  |||| |||||||||||||||||    
T  15147 accaatgaaaaaagaga-aaaagaagttgtcacaaaagttgtaccaaatagttgttcaaatatcactactct 15077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 18116 - 18186
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||  |||| |||||||||||||||||    
T  18116 accaatgaaaagagagaaaaaa-aagttgtcataaaagttgtatcaaatagttgttcaaatatcactactct 18186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 10475 - 10421
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttgt 466  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||    
T  10475 accaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgt 10421  T

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Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 11304 - 11351
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaa 459  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  11304 accaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaa 11351  T

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Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 6929 - 6999
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtc-acaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    |||||||||||||||||||||| ||||||||  |||||||||||| ||| ||||| ||||||||||||||||    
T  6929 accaatgaaaagagagagaaaa-aagttgtcgccaaaagttgtataaaatggttgttcaaatatcactactc 6999  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 36111 - 36185
Alignment:
Q  412 accaatgaaaagagag--agaaaagaagttgtcac-aaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||  | |||| |||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  36111 accaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatcaaatggttgttcaaatatcactactct 36185  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 38991 - 39061
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactc 481  Q
    ||||||||||||||||| ||||||  |||||||||||||||| |||||  | || ||||||||||||||||    
T  38991 accaatgaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 39061  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 219623 - 219590
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcaca 445  Q
    ||||||||||||||||||||||||||||||||||    
T  219623 accaatgaaaagagagagaaaagaagttgtcaca 219590  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 119945 - 120016
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactct 482  Q
    ||||||||||||||||| ||||||| ||| ||||  ||| |||||||| ||||| | |||||||||||||||    
T  119945 accaatgaaaagagagaaaaaagaaattgccacagtagtagtatcaaatggttgtttaaatatcactactct 120016  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 31559 - 31518
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgt 453  Q
    ||||||||||||||||| |||| |||||||||||||| ||||    
T  31559 accaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 482
Target Start/End: Original strand, 27459 - 27523
Alignment:
Q  420 aaagagagagaaaagaagttgtcac-aaaagttgtatcaaacggttgt-caaatatcactactct 482  Q
    ||||||||| ||||||| ||||||| |||| |||||| ||| |||||| ||||||||||||||||    
T  27459 aaagagagaaaaaagaaattgtcactaaaaattgtatgaaatggttgttcaaatatcactactct 27523  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 452
Target Start/End: Complemental strand, 9807 - 9767
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttg 452  Q
    ||||||||||||||| | |||| ||||||||||||||||||    
T  9807 accaatgaaaagagaaaaaaaataagttgtcacaaaagttg 9767  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 113737 - 113809
Alignment:
Q  412 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaacggttg-tcaaatatcactactcta 483  Q
    ||||||||||||||||| || ||| |||||||||||| |||| |||||  | || | ||||||||||||||||    
T  113737 accaatgaaaagagagaaaagagaggttgtcacaaaaattgtttcaaatagatgtttaaatatcactactcta 113809  T

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