View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1317_low_17 (Length: 408)

Name: NF1317_low_17
Description: NF1317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1317_low_17
NF1317_low_17
[»] chr5 (27 HSPs)
chr5 (90-303)||(29720529-29720743)
chr5 (89-303)||(29722689-29722904)
chr5 (90-303)||(29750948-29751163)
chr5 (90-303)||(9789021-9789227)
chr5 (134-303)||(10593423-10593594)
chr5 (90-303)||(18441441-18441651)
chr5 (118-303)||(22536111-22536293)
chr5 (117-303)||(16409640-16409825)
chr5 (134-303)||(25078286-25078457)
chr5 (134-303)||(25136255-25136426)
chr5 (90-303)||(26178047-26178255)
chr5 (134-303)||(40380256-40380427)
chr5 (134-303)||(40382467-40382638)
chr5 (118-303)||(26170927-26171111)
chr5 (134-301)||(16544576-16544747)
chr5 (134-301)||(16546798-16546969)
chr5 (117-270)||(30182783-30182934)
chr5 (115-226)||(13343299-13343408)
chr5 (118-226)||(36073866-36073972)
chr5 (184-226)||(30682809-30682852)
chr5 (117-153)||(3075572-3075608)
chr5 (117-153)||(13488510-13488546)
chr5 (117-153)||(25413070-25413106)
chr5 (117-149)||(28278609-28278641)
chr5 (117-153)||(28750478-28750514)
chr5 (117-153)||(30682745-30682781)
chr5 (117-153)||(42428253-42428289)
[»] chr3 (37 HSPs)
chr3 (111-303)||(54635289-54635482)
chr3 (118-303)||(45283151-45283337)
chr3 (118-303)||(7779824-7780007)
chr3 (90-303)||(801257-801463)
chr3 (135-303)||(6716664-6716834)
chr3 (134-303)||(3617615-3617786)
chr3 (134-286)||(25637610-25637766)
chr3 (118-303)||(23199960-23200141)
chr3 (134-301)||(4600576-4600745)
chr3 (134-301)||(4598355-4598524)
chr3 (134-301)||(10211562-10211731)
chr3 (134-301)||(10209342-10209511)
chr3 (183-303)||(23197823-23197942)
chr3 (134-301)||(10056386-10056555)
chr3 (134-301)||(10058608-10058777)
chr3 (134-301)||(10060830-10060999)
chr3 (134-301)||(10063052-10063221)
chr3 (134-301)||(10065274-10065443)
chr3 (134-301)||(10067473-10067642)
chr3 (115-226)||(5257964-5258073)
chr3 (115-226)||(5260143-5260252)
chr3 (184-303)||(9636010-9636129)
chr3 (184-243)||(19683774-19683835)
chr3 (184-226)||(9634707-9634750)
chr3 (184-226)||(29811107-29811150)
chr3 (115-153)||(37406999-37407037)
chr3 (115-153)||(37408769-37408807)
chr3 (186-226)||(51399053-51399094)
chr3 (117-153)||(761154-761190)
chr3 (117-153)||(9635946-9635982)
chr3 (117-153)||(22834829-22834865)
chr3 (117-153)||(29196212-29196248)
chr3 (117-153)||(29682666-29682702)
chr3 (117-153)||(29811178-29811214)
chr3 (117-153)||(39153187-39153223)
chr3 (117-153)||(40734807-40734843)
chr3 (117-153)||(40735692-40735728)
[»] chr1 (18 HSPs)
chr1 (90-301)||(21054125-21054335)
chr1 (118-303)||(40282542-40282727)
chr1 (90-303)||(9987366-9987579)
chr1 (133-303)||(20622071-20622240)
chr1 (134-303)||(9036581-9036751)
chr1 (134-303)||(44203797-44203968)
chr1 (118-303)||(51765562-51765744)
chr1 (117-243)||(13316174-13316299)
chr1 (184-259)||(8550670-8550748)
chr1 (117-165)||(196732-196780)
chr1 (184-226)||(3157104-3157147)
chr1 (117-226)||(20762907-20763014)
chr1 (188-243)||(44455381-44455438)
chr1 (117-153)||(833992-834028)
chr1 (117-153)||(8550606-8550642)
chr1 (184-223)||(10925464-10925504)
chr1 (117-153)||(13137803-13137839)
chr1 (117-153)||(49918660-49918696)
[»] chr7 (26 HSPs)
chr7 (90-303)||(43503947-43504157)
chr7 (134-303)||(20344061-20344231)
chr7 (134-301)||(1560497-1560667)
chr7 (134-303)||(18388592-18388763)
chr7 (134-303)||(18392028-18392199)
chr7 (134-303)||(6594390-6594561)
chr7 (118-239)||(24790230-24790349)
chr7 (134-303)||(6592172-6592343)
chr7 (134-303)||(32060154-32060325)
chr7 (181-303)||(39731534-39731656)
chr7 (234-303)||(24790006-24790075)
chr7 (117-224)||(48409048-48409153)
chr7 (117-243)||(4178994-4179119)
chr7 (117-224)||(25766779-25766884)
chr7 (188-303)||(35854079-35854194)
chr7 (117-270)||(23555235-23555387)
chr7 (184-226)||(25616094-25616137)
chr7 (184-226)||(43864483-43864526)
chr7 (117-226)||(48489670-48489777)
chr7 (117-163)||(38671047-38671093)
chr7 (188-243)||(27348038-27348095)
chr7 (117-153)||(14069656-14069692)
chr7 (117-153)||(14379684-14379720)
chr7 (115-151)||(29991365-29991401)
chr7 (117-153)||(41648836-41648872)
chr7 (117-153)||(47675959-47675995)
[»] chr8 (24 HSPs)
chr8 (118-285)||(25690139-25690305)
chr8 (118-303)||(3439668-3439853)
chr8 (118-300)||(2627904-2628084)
chr8 (134-301)||(42575157-42575325)
chr8 (134-301)||(15290691-15290860)
chr8 (134-301)||(15471060-15471229)
chr8 (117-270)||(31218452-31218603)
chr8 (117-226)||(19945181-19945288)
chr8 (90-226)||(17982892-17983021)
chr8 (118-226)||(34254154-34254260)
chr8 (90-226)||(1746018-1746148)
chr8 (117-165)||(3303493-3303541)
chr8 (117-153)||(42498505-42498541)
chr8 (117-226)||(30143579-30143686)
chr8 (184-226)||(34256393-34256436)
chr8 (184-303)||(42498359-42498477)
chr8 (184-243)||(18105962-18106022)
chr8 (117-165)||(4743050-4743098)
chr8 (117-153)||(5689577-5689613)
chr8 (117-153)||(15213096-15213132)
chr8 (207-243)||(32902096-32902132)
chr8 (117-153)||(41366440-41366476)
chr8 (117-153)||(43036732-43036768)
chr8 (184-223)||(44304097-44304137)
[»] chr4 (15 HSPs)
chr4 (88-303)||(31495097-31495319)
chr4 (134-303)||(8395768-8395940)
chr4 (134-303)||(8393559-8393731)
chr4 (134-303)||(7125067-7125238)
chr4 (134-285)||(7122867-7123019)
chr4 (117-224)||(13992113-13992218)
chr4 (134-301)||(5136232-5136402)
chr4 (134-301)||(5138457-5138627)
chr4 (184-226)||(5369968-5370011)
chr4 (117-226)||(48143287-48143394)
chr4 (117-153)||(26175459-26175495)
chr4 (117-153)||(29999651-29999687)
chr4 (117-153)||(48893465-48893501)
chr4 (117-165)||(52467180-52467228)
chr4 (117-153)||(56178458-56178494)
[»] chr6 (24 HSPs)
chr6 (89-303)||(3072551-3072762)
chr6 (134-303)||(27648025-27648187)
chr6 (118-303)||(16555034-16555220)
chr6 (118-303)||(16578335-16578521)
chr6 (118-303)||(16616859-16617045)
chr6 (118-303)||(16631590-16631776)
chr6 (118-303)||(16653277-16653463)
chr6 (134-303)||(6097286-6097454)
chr6 (134-303)||(25421471-25421642)
chr6 (118-303)||(412267-412434)
chr6 (134-303)||(6027412-6027582)
chr6 (134-303)||(34167245-34167416)
chr6 (115-303)||(2171347-2171535)
chr6 (134-301)||(33341935-33342106)
chr6 (134-301)||(13154082-13154251)
chr6 (134-214)||(6136135-6136216)
chr6 (90-222)||(30834333-30834459)
chr6 (134-301)||(34165025-34165194)
chr6 (90-226)||(16452127-16452257)
chr6 (115-226)||(5408890-5408999)
chr6 (115-226)||(5413215-5413324)
chr6 (184-226)||(9182917-9182960)
chr6 (184-226)||(31404561-31404604)
chr6 (121-165)||(33160177-33160221)
[»] chr2 (20 HSPs)
chr2 (133-303)||(6266856-6267024)
chr2 (117-303)||(4484150-4484333)
chr2 (134-303)||(12647218-12647389)
chr2 (117-303)||(30833511-30833694)
chr2 (90-303)||(32289729-32289937)
chr2 (134-285)||(13655861-13656015)
chr2 (117-270)||(4502955-4503106)
chr2 (184-226)||(17057255-17057298)
chr2 (184-226)||(17085238-17085281)
chr2 (184-226)||(36205551-36205594)
chr2 (184-226)||(36987961-36988004)
chr2 (117-226)||(45099993-45100100)
chr2 (117-153)||(723569-723605)
chr2 (117-153)||(11690797-11690833)
chr2 (117-153)||(17057191-17057227)
chr2 (117-153)||(17085174-17085210)
chr2 (117-165)||(24885883-24885931)
chr2 (117-153)||(34139595-34139631)
chr2 (117-153)||(36987897-36987933)
chr2 (117-153)||(42362655-42362691)
[»] scaffold0565 (1 HSPs)
scaffold0565 (134-285)||(2436-2588)
[»] scaffold1808 (1 HSPs)
scaffold1808 (134-301)||(32-201)
[»] scaffold0674 (1 HSPs)
scaffold0674 (134-301)||(3558-3727)
[»] scaffold0137 (1 HSPs)
scaffold0137 (134-301)||(6440-6611)
[»] scaffold0491 (2 HSPs)
scaffold0491 (118-303)||(10982-11164)
scaffold0491 (181-303)||(8616-8738)
[»] scaffold0286 (1 HSPs)
scaffold0286 (115-226)||(11804-11914)
[»] scaffold0002 (1 HSPs)
scaffold0002 (115-270)||(434728-434882)
[»] scaffold1519 (1 HSPs)
scaffold1519 (115-224)||(1157-1264)
[»] scaffold0066 (1 HSPs)
scaffold0066 (184-243)||(20301-20362)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 1e-85; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 29720743 - 29720529
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 187  Q
    ||||||||||| ||||||||| ||||  ||||||||||| |  |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  29720743 tgttgtgaattccgatctcaagtcgaaccacaccaatacaagaaatatgttgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtacaag 29720644  T
Q  188 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaag 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29720643 caataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagagggaagaagaaaacaaag 29720545  T
Q  288 acaccaagagattgtt 303  Q
    ||||||||||||||||    
T  29720544 acaccaagagattgtt 29720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 89 - 303
Target Start/End: Complemental strand, 29722904 - 29722689
Alignment:
Q  89 atgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaa 186  Q
    |||||||||||| ||||||||| ||||  ||||||||||| |  |||||| |||||||||||||| ||| |||||||||||||||||||||||||| |||    
T  29722904 atgttgtgaattccgatctcaagtcgaaccacaccaatacaagaaatatggtgtgtggagcaaagtagagtggtaaccaccaaacaaagtgtgtgtacaa 29722805  T
Q  187 gcaataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaa 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29722804 gcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagagggaagaagaaaacaaa 29722706  T
Q  287 gacaccaagagattgtt 303  Q
    |||||||||||||||||    
T  29722705 gacaccaagagattgtt 29722689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 29750948 - 29751163
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 187  Q
    ||||||||||| | |||| |||||||  ||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  29750948 tgttgtgaattccaatcttaaatcgaaccacaccaatacaagaaatatgatgtgtggagcaaaggagagtggtaaccaccaaacaatgtgtgtgtgcaag 29751047  T
Q  188 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaac-aaa 286  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||    
T  29751048 caataatcaacaaaacaccacctagatataatctagaaaacaagtgagaaacacagtacacaatcacaaga-taaaaggagagggaagaagaaaacaaaa 29751146  T
Q  287 gacaccaagagattgtt 303  Q
    |||||||||||||||||    
T  29751147 gacaccaagagattgtt 29751163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 9789021 - 9789227
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| |||||||||| |    ||||||||||| || ||||||||||||||||||||| | | ||||||||||| ||||||||  |||||||||    
T  9789021 tgttgtgaattccgatctcaaaac----cacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgt--gtgcaagca 9789113  T
Q  190 ataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagac 289  Q
    | ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||    
T  9789114 aaaatcaacaaaacagcacctagatctaatctaggaaagaagtgaaaaacacaatacacaagcacaaga-taaacggagagggaagaggaaaacaaagac 9789212  T
Q  290 acc-aagagattgtt 303  Q
    ||| |||||||||||    
T  9789213 accaaagagattgtt 9789227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 10593594 - 10593423
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||||| | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  10593594 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtgtattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagt 10593495  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    | |||||||||  |||||||||||||| || ||||||||||||| |||||||||| ||||||||||||||||    
T  10593494 gtgaaacacaaagcacaatcacaagataaacaaggagagggaagtagaaaacaaatacaccaagagattgtt 10593423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 18441441 - 18441651
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| |||||||||| |    ||||||||||| || || |||||||||||||||||| | | ||||||||||| ||||||||  |||||||||    
T  18441441 tgttgtgaattccgatctcaaaac----cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgt--gtgcaagca 18441533  T
Q  190 ataatcaacaaaacatcacctagatctaatctaggaaacaagtg----agaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaa 285  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    | ||||||||||||||| ||||||| |||| |||||||||||| ||||||||    
T  18441534 ataatcaacaaaacagcacctagatctaatctaggaaagaagtgaaaaaaaaacacaatacacaagcacaaga-taaacggagagggaagaggaaaacaa 18441632  T
Q  286 agacacc-aagagattgtt 303  Q
    ||||||| |||||||||||    
T  18441633 agacaccaaagagattgtt 18441651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 22536111 - 22536293
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaa-caaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||||| ||  |||||||||||||| | |||||  ||||||||||||| |||||||| ||  ||||||| ||||||||||| | |||||||||||    
T  22536111 cacaccaatacaaagaatgatgtgtggagcgacggagagcggtaaccaccaaagcaaagtgtatg--caagcaacaatcaacaaaaaa-cacctagatct 22536207  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||    
T  22536208 aatctaggaaacaagtgagaaactcaaaacacaatcacaaga-taaaaggggagggaagaagaaaacaaaagcaccaagagattgtt 22536293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 117 - 303
Target Start/End: Complemental strand, 16409825 - 16409640
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||| || ||||||| |||  ||||||||||||||||| |||| ||||||||||    
T  16409825 tcacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagcaataatcaacaataacaacacctagatc 16409729  T
Q  216 taatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||| |||| || || || |||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  16409728 taatctaggaaacaaagtgaaaagcataaaacacaagcacaagat-aaaaggagagggaagaggaaaacaaagacaccaaagagattgtt 16409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 25078457 - 25078286
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  25078457 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 25078358  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||    
T  25078357 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattgtt 25078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 25136426 - 25136255
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  25136426 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 25136327  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||    
T  25136326 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattgtt 25136255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 26178255 - 26178047
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| |||||||||| |    ||||||||||| || || |||||||||||||||||| | | |||||||| || |||||||||||  ||||||    
T  26178255 tgttgtgaattccgatctcaaaac----cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaaccactaa-caaagtgtgtg--caagca 26178163  T
Q  190 ataatcaacaa-aacatcacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaag 287  Q
    ||||||||  | |||| ||||||||||||||||||||| ||| |||| || || || |||||| |||||||| |||||||||||||||| ||||||||||    
T  26178162 ataatcaatgataacaacacctagatctaatctaggaatcaaagtgaaaagcataaaacacaagcacaagat-aaaaggagagggaagaggaaaacaaag 26178064  T
Q  288 acacc-aagagattgtt 303  Q
    ||||| |||||||||||    
T  26178063 acaccaaagagattgtt 26178047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 40380427 - 40380256
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  40380427 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 40380328  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||    
T  40380327 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 40380256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 40382638 - 40382467
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    ||||||||||||||   ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  40382638 atgatgtgtggagcggcggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 40382539  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||    
T  40382538 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 40382467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 26171111 - 26170927
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatc-aacaaaacatcacctagatct 216  Q
    ||||||||||| || || |||||||||||||||||| | | |||| || | ||||||  ||||||||||||||||||| |  | |||| |||||||||||    
T  26171111 cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaagca-ctaacaaa--gtgtgtgcaagcaataatcgatgataacaacacctagatct 26171015  T
Q  217 aatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    |||||||||| | || ||| || || || |||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||    
T  26171014 aatctaggaatcaaaatgaaaagcataaaacacaagcacaaga-taaaaggagagggaagaggaaaacaaagacaccaaagagattgtt 26170927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 16544747 - 16544576
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  16544747 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 16544648  T
Q  233 gagaaacacaatacacaatcacaagatta--aaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| |  |||||||||||||||||||||||| | |||| |||||||||    
T  16544647 gtgaaacaaagcaactaaacacaagataaacaaaggagagggaagaagaaaacaataaacacaaagagattg 16544576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 16546969 - 16546798
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| || ||||||||||||||||  | | | |||||||| || |||||||||| |||||| ||| ||||||||||||||||    
T  16546969 atgatgtgtggagcgacggagagtgataaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagt 16546870  T
Q  233 gagaaacacaatacacaatcacaagatta--aaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| |  |||||||||||||||||||||||| | |||| |||||||||    
T  16546869 gtgaaacaaagcaactaaacacaagataaacaaaggagagggaagaagaaaacaataaacacaaagagattg 16546798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 117 - 270
Target Start/End: Complemental strand, 30182934 - 30182783
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    ||||||||| || || ||||||||||||||||||||| | | |||||||  || |||||||  ||  ||| ||||||||||||| |||| ||||||||||    
T  30182934 tcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caaacaataatcaacaataacaacacctagatc 30182838  T
Q  216 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 270  Q
    ||||||||||||| |||||| || ||||| |||||| ||||||| |||||||||||    
T  30182837 taatctaggaaacaaagtgaaaagcacaaaacacaagcacaaga-taaaaggagag 30182783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 13343408 - 13343299
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||| ||||| || ||||||||||||||||||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||    
T  13343408 agtcacactaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacaacacctaga 13343312  T
Q  214 tctaatctaggaa 226  Q
    |||||||||||||    
T  13343311 tctaatctaggaa 13343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 36073866 - 36073972
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 216  Q
    ||||||||||| || ||||||||||||||||||||| | |  ||||||  || |||||||  ||  ||||||||||||||||| |||| |||||||||||    
T  36073866 cacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatct 36073962  T
Q  217 aatctaggaa 226  Q
    ||||||||||    
T  36073963 aatctaggaa 36073972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 30682809 - 30682852
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  30682809 caagcaataatcaacaataacaacacctagatctaatctaggaa 30682852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 3075572 - 3075608
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  3075572 tcacaccaatacaaactatgatgtgtggagcaaagga 3075608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 13488546 - 13488510
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  13488546 tcacaccaatacaaaatatgatgtgtggagtaaagga 13488510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 25413106 - 25413070
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  25413106 tcacaccaatacgaactatgatgtgtggagcaaagga 25413070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 28278641 - 28278609
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaa 149  Q
    |||||||||||| ||||||||||||||||||||    
T  28278641 tcacaccaatacaaaatatgatgtgtggagcaa 28278609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 28750478 - 28750514
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  28750478 tcacaccaatacaaattatgatgtgtggagcaaagga 28750514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 30682745 - 30682781
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  30682745 tcacaccaatacaaactatgatgtgtggagcaaagga 30682781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 42428253 - 42428289
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  42428253 tcacaccaatacaaactatgatgtgtggagcaaagga 42428289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 4e-82; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 54635482 - 54635289
Alignment:
Q  111 atcgagtcacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacc 209  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54635482 atcgagtcacaccaatactaaataatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacc 54635383  T
Q  210 tagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||    
T  54635382 tagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagagggaagaagaaaacaaaagcaccaaagagattgtt 54635289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 45283337 - 45283151
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 217  Q
    ||||||||||| ||  |||||||||||||| | |||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  45283337 cacaccaatacaaagaatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgtttgtgcaagcaataatcaacaaaacaccacctagatcta 45283238  T
Q  218 atctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||  |||||||||||||||    
T  45283237 atctaggaaactagtgagaaacacaatacacaatcacaagataaacaaggagagggaagaagaaaacaaaagcaccaagagattgtt 45283151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 7779824 - 7780007
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa-catcacctagatct 216  Q
    ||||||||||| || || |||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||| || |||||||||||    
T  7779824 cacaccaatacgaagtaagatgtgtggagcaaaggagagtggtaaccaccaa-caaagtgtgtg--caagcaataatcaacaaaaacagcacctagatct 7779920  T
Q  217 aatctaggaaacaagtgagaaa-cacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  7779921 aatctaggaaacaagtgaaaaaacacaatacacaagcacaagat-aaaaggagagggaagaggaaaacaaagacaccaagagattgtt 7780007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 801463 - 801257
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||||| | | |||||||| ||  ||   |||||||||||||    
T  801463 tgttgtgaattccgatctcaaaacgtgtcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaataaa---gtgtgtgcaagca 801367  T
Q  190 ataatcaac--aaaacatcacctagatctaatctaggaaacaagt-gagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaa 286  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| || ||||||||||      ||||||| |||||||||||||||||||||||||||    
T  801366 ataatcaacaaaaaacagcacctagatctaatctaggaaacaagtggaaaaacacaata------cacaaga-taaaaggagagggaagaagaaaacaaa 801274  T
Q  287 gacaccaagagattgtt 303  Q
    |||||||||||||||||    
T  801273 gacaccaagagattgtt 801257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 135 - 303
Target Start/End: Complemental strand, 6716834 - 6716664
Alignment:
Q  135 tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaa-caaaacatcacctagatctaatctaggaaacaagtg 233  Q
    ||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  6716834 tgatgtgtggagcaacggaaagcggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaaccaaaacaccacctagatctaatctaggaaacaagtg 6716735  T
Q  234 agaaacac-aatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
     ||||| | || | |||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||    
T  6716734 tgaaactcaaaaatacaatcacaaga-taaaaggggagggaagaagaaaacaaaagcaccaaagagattgtt 6716664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 3617786 - 3617615
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  3617786 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 3617687  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||    
T  3617686 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattgtt 3617615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 134 - 286
Target Start/End: Complemental strand, 25637766 - 25637610
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||||| | |||||||||  || |||||||||| |||||||||||||||||||||||||||    
T  25637766 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagt 25637667  T
Q  233 gagaaacacaa--tacacaatcacaagattaa-aaggagagggaagaagaaaacaaa 286  Q
    | |||||||||   | ||||||||||||| || ||||||||||||||||||||||||    
T  25637666 gtgaaacacaaagcaaacaatcacaagataaacaaggagagggaagaagaaaacaaa 25637610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 23199960 - 23200141
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 217  Q
    ||||||||||| || |||||| |||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| | | ||||||||||||    
T  23199960 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataaaacacctagatcta 23200056  T
Q  218 atctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    ||||||||||| || ||| ||||||||  ||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23200057 atctaggaaacaaaatgaaaaacacaaaccacaagcataaga-taaaaggagagggaagaagaaaacaaagacaccaa-agattgtt 23200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 4600576 - 4600745
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||| | || |||||||||| |||||||||| ||||||||||||||||    
T  4600576 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagt 4600675  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |||  ||||||||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  4600676 gtgaaaca-aatcaacaatcacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 4600745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 4598355 - 4598524
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| || ||| |||||| |||||||||| ||||||||||||||||    
T  4598355 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagt 4598454  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| ||   ||||||||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  4598455 gtgaaaca-aagcaacaatcacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 4598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10211731 - 10211562
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||| |||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  10211731 atgatgtgtggagcgacggagagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 10211632  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| ||   ||||||||||||| || |||||||||||||| |||||||| | |||| |||||||||    
T  10211631 gtgaaaca-aagcaacaatcacaagataaacaaggagagggaagatgaaaacaataaacacaaagagattg 10211562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10209511 - 10209342
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||  | ||||| ||||||||||||| |||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  10209511 atgatgtgtggagtgacggagagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 10209412  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| ||   ||||||||||||| || |||||||||||||| |||||||| | |||| |||||||||    
T  10209411 gtgaaaca-aagcaacaatcacaagataaacaaggagagggaagatgaaaacaataaacacaaagagattg 10209342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 23197823 - 23197942
Alignment:
Q  183 gcaagcaataatcaacaaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaa 281  Q
    |||||||||||||||||| | | ||| ||||||||||||||||||| || ||| ||||||||  ||||| ||||||| ||||||||||| ||||| ||||    
T  23197823 gcaagcaataatcaacaataaaacacatagatctaatctaggaaacaaaatgaaaaacacaaaccacaagcacaaga-taaaaggagagagaagaggaaa 23197921  T
Q  282 acaaagacaccaagagattgtt 303  Q
    ||||||||||||| ||||||||    
T  23197922 acaaagacaccaa-agattgtt 23197942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10056555 - 10056386
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10056555 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10056457  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  10056456 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 10056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10058777 - 10058608
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10058777 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10058679  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  10058678 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 10058608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10060999 - 10060830
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10060999 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10060901  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  10060900 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 10060830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10063221 - 10063052
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10063221 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10063123  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  10063122 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 10063052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10065443 - 10065274
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10065443 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10065345  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  10065344 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 10065274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 10067642 - 10067473
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10067642 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10067544  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  10067543 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 10067473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 5257964 - 5258073
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||    
T  5257964 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctaga 5258060  T
Q  214 tctaatctaggaa 226  Q
    |||||||||||||    
T  5258061 tctaatctaggaa 5258073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 5260143 - 5260252
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    ||||| |||||||| || ||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||    
T  5260143 agtcaaaccaatacgaactatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacaacacctaga 5260239  T
Q  214 tctaatctaggaa 226  Q
    |||||| ||||||    
T  5260240 tctaatttaggaa 5260252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 9636010 - 9636129
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaa 281  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || || ||  ||||| |||||||| ||| |||||  | |||   ||    
T  9636010 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcataaatcacaagcacaagataaaagggaga--gcagagagaa 9636107  T
Q  282 acaaagacaccaagagattgtt 303  Q
    ||||| ||||||||||||||||    
T  9636108 acaaacacaccaagagattgtt 9636129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 19683774 - 19683835
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa-acaagtgagaaacacaa 243  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  19683774 caagcaataatcaacaataacagcacctagatctaatctaggaataaaagtgaaaaacacaa 19683835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 9634707 - 9634750
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  9634707 caagcaataatcaacaataacagcacctagatctaatctaggaa 9634750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 29811150 - 29811107
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  29811150 caagcaataatcaacaataacagcacctagatctaatctaggaa 29811107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 37407037 - 37406999
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  37407037 agtcacaccactacaaaatatgatgtgtggagcaaagga 37406999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 37408807 - 37408769
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  37408807 agtcacatcaatacaaaatatgatgtgtggagcaaagga 37408769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 51399094 - 51399053
Alignment:
Q  186 agcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  51399094 agcaataatcaacaataacagcacctagatctaatctaggaa 51399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 761190 - 761154
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  761190 tcacaccaatacaaactatgatgtgtggagcaaagga 761154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 9635946 - 9635982
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  9635946 tcacaccaatacaaactatgatgtgtggagcaaagga 9635982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 22834829 - 22834865
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  22834829 tcacaccaatacaaactatgatgtgtggagcaaagga 22834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 29196212 - 29196248
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  29196212 tcacaccaatacaaactatgatgtgtggagcaaagga 29196248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 29682702 - 29682666
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  29682702 tcacaccaatacaaactatgatgtgtggagcaaagga 29682666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 29811214 - 29811178
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  29811214 tcacaccaatacaaaatatgatttgtggagcaaagga 29811178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 39153187 - 39153223
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  39153187 tcacaccaatacaaactatgatgtgtggagcaaagga 39153223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 40734843 - 40734807
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  40734843 tcacaccaatacaaactatgatgtgtggagcaaagga 40734807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 40735728 - 40735692
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  40735728 tcacaccaatacaaattatgatgtgtggagcaaagga 40735692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 90 - 301
Target Start/End: Complemental strand, 21054335 - 21054125
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 187  Q
    ||||||||||| ||||||||||||||  ||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||    
T  21054335 tgttgtgaattccgatctcaaatcgaaccacaccaatacaagaaatatgatgtgtggagcaaaggagagtggtaaccaccaaactaagtgtgtg--caag 21054238  T
Q  188 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaag 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  21054237 caataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagagggaagaagaaaacaaat 21054139  T
Q  288 acaccaagagattg 301  Q
    ||||||||||||||    
T  21054138 acaccaagagattg 21054125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 40282727 - 40282542
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaa-caaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||| | || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  40282727 cacaccaatgcaaactatgatgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatct 40282628  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40282627 aatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagagggaagaagaaaacaaagacaccaagagattgtt 40282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 9987579 - 9987366
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaa--tatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 187  Q
    ||||||||||| ||||||||||||||  ||||||||||| |||  ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||    
T  9987579 tgttgtgaattccgatctcaaatcgaaccacaccaatacgaaaaatatgatgtgtggagcaaaggagagtggtaaccaccaatcaaagtgtgtg--caag 9987482  T
Q  188 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaac-aaa 286  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  9987481 caataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacactatacacaatcacaaga-taaaaggagagggaagaagaaaacaaaa 9987383  T
Q  287 gacaccaagagattgtt 303  Q
    |||||||||||||||||    
T  9987382 gacaccaagagattgtt 9987366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 133 - 303
Target Start/End: Original strand, 20622071 - 20622240
Alignment:
Q  133 tatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20622071 tatgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagt 20622170  T
Q  233 gagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20622171 gagaaacacaatacacaatcacaaga-taaaaggagagggaagaagaaaacaaagacaccaagagattgtt 20622240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 9036751 - 9036581
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagtg 233  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  9036751 atgatgtgtggagctaaggagagtggtaaccaccaaacaaagtgtttgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtg 9036652  T
Q  234 agaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
     |||||||||  |||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  9036651 tgaaacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattgtt 9036581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 44203968 - 44203797
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  44203968 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 44203869  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||    
T  44203868 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattgtt 44203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 51765744 - 51765562
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 216  Q
    ||||||||||| |||||||||||||||||||||||| | | |||||||| ||  ||   ||| |||||||||||||||||||| |||| |||||||||||    
T  51765744 cacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaattaa---gtgagtgcaagcaataatcaacaataacaacacctagatct 51765648  T
Q  217 aatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||| |||| || |||||  ||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  51765647 aatctaggaaacaaagtgaaaagcacaaaccacaagcacaagat-aaaaggagagggaagaggaaaacaaagacaccaa-agattgtt 51765562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 13316174 - 13316299
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| |||||| ||||||||||||||||| | | |||| ||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  13316174 tcacaccaatacgaaatataatgtgtggagcaaaggaaagtagtaatcaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 13316270  T
Q  216 taatctaggaaac-aagtgagaaacacaa 243  Q
    ||||||||||| | |||||| ||||||||    
T  13316271 taatctaggaatcaaagtgaaaaacacaa 13316299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 8550670 - 8550748
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagat 259  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| ||||||||    
T  8550670 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagat 8550748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 196732 - 196780
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 165  Q
    |||||||||||| || ||||||||||||||||||||| ||| |||||||    
T  196732 tcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaacca 196780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 3157147 - 3157104
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  3157147 caagcaataatcaacaataacagcacctagatctaatctaggaa 3157104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 20763014 - 20762907
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | |  ||||||   | ||||  |||  | ||||||||||||||||| |||| ||||||||||    
T  20763014 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtattaacca-atatcaaa--gtgaattcaagcaataatcaacaataacagcacctagatc 20762918  T
Q  216 taatctaggaa 226  Q
    |||||||||||    
T  20762917 taatctaggaa 20762907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 44455438 - 44455381
Alignment:
Q  188 caataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 243  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  44455438 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 44455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 833992 - 834028
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  833992 tcacaccaatacaaactatgatgtgtggagcaaagga 834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 8550606 - 8550642
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  8550606 tcacaccaatacaaactatgatgtgtggagcaaagga 8550642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 10925504 - 10925464
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctag 223  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  10925504 caagcaataatcaacaataacaacacctagatctaatctag 10925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 13137803 - 13137839
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  13137803 tcacaccaatacaaattatgatgtgtggagcaaagga 13137839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 49918696 - 49918660
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  49918696 tcacaccaatacaaactatgatgtgtggagcaaagga 49918660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 5e-66; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 43503947 - 43504157
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  43503947 tgttgtgaattccgatctcaaatcgtgtcacaccaatacgaaatatgatgtgtggagcaaaggagagtggtaaccacc-aacaaagtgtgtgtgcaagca 43504045  T
Q  190 ataatcaacaaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaaga 288  Q
    ||||||||||||  | || |||||||||||||||||| | |||||| || || || |||||| ||||||| ||||||||||||||||| |||||||||||    
T  43504046 ataatcaacaaa--aacagctagatctaatctaggaatcaaagtgaaaagcataaaacacaagcacaaga-taaaaggagagggaagaggaaaacaaaga 43504142  T
Q  289 caccaagagattgtt 303  Q
    |||||||||||||||    
T  43504143 caccaagagattgtt 43504157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 20344231 - 20344061
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa---catcacctagatctaatctaggaaacaa 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||| ||||||   || |||||||||||||||||||||||||    
T  20344231 atgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaatcgacaaaaaaccagcacctagatctaatctaggaaacaa 20344134  T
Q  231 gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||    
T  20344133 gtgagaaacacaaaacacaatcacaaga-taaaaggagagggaagaagaaaacaaaagcaccaaagagattgtt 20344061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 1560497 - 1560667
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||| ||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  1560497 atgatgtgtggagcgacggagagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 1560596  T
Q  233 gagaaacacaatac-acaatcacaagattaa-aaggagagggaagaagaaaacaaagacaccaagagattg 301  Q
    | |||||||||  | ||||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  1560597 gtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattg 1560667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 18388592 - 18388763
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  18388592 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 18388691  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || || |||||||||||||||||||| | |||| |||||||||||    
T  18388692 gtgaaacacaaagcaacaatcacaaga-tacaaagagagggaagaagaaaacaataaacacaaagagattgtt 18388763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 18392028 - 18392199
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| |  |||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  18392028 atgatgtgtggagcgacagagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 18392127  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||    
T  18392128 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattgtt 18392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 6594390 - 6594561
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  6594390 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 6594489  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||    
T  6594490 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 6594561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 24790349 - 24790230
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 217  Q
    ||||||||| | || ||||||||||||||||| ||| | ||||||||||||||||||||| |||  |||| |||||||||||||||| ||||||||||||    
T  24790349 cacaccaatgcaaagtatgatgtgtggagcaacggaaagtggtaaccaccaaacaaagtgcgtg--caagtaataatcaacaaaacaccacctagatcta 24790252  T
Q  218 atctaggaaacaagtgagaaac 239  Q
    |||||||||||| |||||||||    
T  24790251 atctaggaaacaggtgagaaac 24790230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 6592172 - 6592343
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  6592172 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 6592271  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||  || | | |||||||||||||||||| | |||| |||||||||||    
T  6592272 gtgaaacacaaagcaacaatcacaagaaaaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 6592343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 32060154 - 32060325
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  32060154 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 32060253  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||    
T  32060254 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 32060325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 39731656 - 39731534
Alignment:
Q  181 gtgcaagcaataatcaacaa-aacatcacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaag 278  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || |||||  ||||| |||||||| |||||||||||||||| |    
T  39731656 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagat-aaaaggagagggaagagg 39731558  T
Q  279 aaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||||| ||||||||    
T  39731557 aaaacaaagacaccaa-agattgtt 39731534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 24790075 - 24790006
Alignment:
Q  234 agaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaa-caaagacaccaagagattgtt 303  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  24790075 agaaacacaatgcacaatcacaagat-aaaaggagagggaagaagaaaaacaaagacaccaagagattgtt 24790006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 48409153 - 48409048
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  48409153 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacagcacctagatc 48409057  T
Q  216 taatctagg 224  Q
    |||||||||    
T  48409056 taatctagg 48409048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 4179119 - 4178994
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||  || |||||||  |||  |||||||||||||||| |||| ||||||||||    
T  4179119 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatgt--aagcaataatcaacaataacagcacctagatc 4179023  T
Q  216 taatctaggaaac-aagtgagaaacacaa 243  Q
    ||||||||||| | |||||| ||||||||    
T  4179022 taatctaggaatcaaagtgaaaaacacaa 4178994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 25766779 - 25766884
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| |||||||||||||||||||||| | | | |||||||   ||||||  ||| | |||||||||||||||||| |||| ||||||||||    
T  25766779 tcacaccaatacgaaatatgatgtgtggagcaaagaaaagtagtaacca-ataacaaa--gtgagcgcaagcaataatcaacaataacagcacctagatc 25766875  T
Q  216 taatctagg 224  Q
    |||||||||    
T  25766876 taatctagg 25766884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 303
Target Start/End: Complemental strand, 35854194 - 35854079
Alignment:
Q  188 caataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaa 285  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| || || || |||||| |||||||| ||| |||||  |||||   ||||||    
T  35854194 caataatcaacaataacagcacctagatctaatctaggaagcaaagtgaaaagcataaaacacaagcacaagataaaagggaga--gaagagagaaacaa 35854097  T
Q  286 agacaccaagagattgtt 303  Q
    | ||||||||||||||||    
T  35854096 acacaccaagagattgtt 35854079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 270
Target Start/End: Complemental strand, 23555387 - 23555235
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  23555387 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacaacacctagatc 23555291  T
Q  216 taatctaggaaac-aagtgagaaacacaata-cacaatcacaagattaaaaggagag 270  Q
    ||||||||||| | |||| | |||||||||| ||||| || |||| |||||||||||    
T  23555290 taatctaggaatcaaagtaaaaaacacaataccacaagcaaaaga-taaaaggagag 23555235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 25616137 - 25616094
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  25616137 caagcaataatcaacaataacaacacctagatctaatctaggaa 25616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 43864526 - 43864483
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  43864526 caagcaataatcaacaataacagcacctagatctaatctaggaa 43864483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 48489777 - 48489670
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||  |  |||||||    ||  ||||||||||||||| |||| ||||||||||    
T  48489777 tcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgaacatg--agcaataatcaacaataacaacacctagatc 48489681  T
Q  216 taatctaggaa 226  Q
    |||||||||||    
T  48489680 taatctaggaa 48489670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 38671047 - 38671093
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaac 163  Q
    |||||||||||| || ||||||||||||||||||||| ||| |||||    
T  38671047 tcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaac 38671093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 27348095 - 27348038
Alignment:
Q  188 caataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 243  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  27348095 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 27348038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 14069656 - 14069692
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  14069656 tcacaccaatacaaactatgatgtgtggagcaaagga 14069692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 14379684 - 14379720
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  14379684 tcacaccaatacaaactatgatgtgtggagcaaagga 14379720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 29991401 - 29991365
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaag 151  Q
    |||||||||||||| || |||||||||||||||||||    
T  29991401 agtcacaccaatacaaactatgatgtgtggagcaaag 29991365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 41648836 - 41648872
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  41648836 tcacaccaatacaaactatgatgtgtggagcaaagga 41648872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 47675959 - 47675995
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  47675959 tcacaccaatacaaactatgatgtgtggagcaaagga 47675995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 285
Target Start/End: Complemental strand, 25690305 - 25690139
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 217  Q
    ||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  25690305 cacaccaatacaaagaatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaagaatcaacaaaacaccacctagatcta 25690206  T
Q  218 atctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaa 285  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||||||    
T  25690205 atctaggaaacaagtgagaaacacaaaacacactcacaaga-taaaaggggagggaagaagaaaacaa 25690139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 3439853 - 3439668
Alignment:
Q  118 cacaccaatactaaata--tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatc 215  Q
    ||||||||||||||| |  ||||||||||||| | |||||  ||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  3439853 cacaccaatactaaaaaaatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgtgtg--caagcaacaatcaacaaaacaccacctagatc 3439756  T
Q  216 taatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||    
T  3439755 taatctaggaaacaagtgagaaactcaaaacacaatcacaaga-taaaaggagagggaagaagaaaacaaaagcaccaaagagattgtt 3439668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 2628084 - 2627904
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataa-tcaacaa-aacatcacctagatc 215  Q
    ||||||||||| || || |||||||||||||||||| | | |||||||| || ||||||| |||  ||||||| || ||||||| |||| ||||||||||    
T  2628084 cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagcaaaaaatcaacaataacaacacctagatc 2627988  T
Q  216 taatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagatt 300  Q
    ||||||||||||||||||| || || || |||||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  2627987 taatctaggaaacaagtgaaaagcataaaacacaagcacaagat-aaaaggagagggaagaggaaaacaaagacaccaagagatt 2627904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 42575157 - 42575325
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  42575157 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 42575256  T
Q  233 gagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |  ||| ||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  42575257 gtgaaacaaagcaaccaaacacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattg 42575325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 15290860 - 15290691
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||  | | | |||||||| || |||||| ||| |||||||||| |||||||||| |||||    
T  15290860 atgatgtgtggagcgacggagagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagt 15290761  T
Q  233 gagaaacacaataca-caatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||||||  || |||||||||||| | ||||||||||||||||||||||| | |||| |||||||||    
T  15290760 gtgaaacacaaagcaacaatcacaagat-acaaggagagggaagaagaaaacaataaacacaaagagattg 15290691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 15471229 - 15471060
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||  | | | |||||||| || |||||| ||| |||||||||| |||||||||| |||||    
T  15471229 atgatgtgtggagcgacggagagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagt 15471130  T
Q  233 gagaaacacaataca-caatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||||||  || |||||||||||| | ||||||||||||||||||||||| | |||| |||||||||    
T  15471129 gtgaaacacaaagcaacaatcacaagat-acaaggagagggaagaagaaaacaataaacacaaagagattg 15471060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 270
Target Start/End: Complemental strand, 31218603 - 31218452
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||  || ||||||||||||||||||||| | | | |||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  31218603 tcacaccaatataaactatgatgtgtggagcaaaggaaagtagcaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 31218507  T
Q  216 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 270  Q
    ||||||||||||| |||||| || ||||| ||| || ||||||| |||||||||||    
T  31218506 taatctaggaaacaaagtgaaaagcacaaaacataagcacaaga-taaaaggagag 31218452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 19945181 - 19945288
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || | ||||||||||||||||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  19945181 tcacaccaatacaaactttgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 19945277  T
Q  216 taatctaggaa 226  Q
    |||||||||||    
T  19945278 taatctaggaa 19945288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 226
Target Start/End: Complemental strand, 17983021 - 17982892
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| ||||||||||||     |||||||||| || |||||||||||||||||||||   | |||||||  || |||||||      ||||||    
T  17983021 tgttgtgaattccgatctcaaatc-----acaccaatacaaactatgatgtgtggagcaaaggaacgtagtaaccaataa-caaagtgaaca--caagca 17982930  T
Q  190 ataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  17982929 ataatcaacaataacagcacctagatctaatctaggaa 17982892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 34254154 - 34254260
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 216  Q
    ||||||||||| || ||||||||||||||||||||| | | |||||||  |  ||||||| |    ||||||||||||||||| |||| |||||||||||    
T  34254154 cacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgagca--caagcaataatcaacaataacagcacctagatct 34254250  T
Q  217 aatctaggaa 226  Q
    ||||||||||    
T  34254251 aatctaggaa 34254260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 1746018 - 1746148
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    |||||||||||||| |||||||     |||||||||||| || |||||||||||||| |||||| | | |||||||  || |||||||      ||||||    
T  1746018 tgttgtgaatttcggtctcaaaa----tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataa-caaagtgaaca--caagca 1746110  T
Q  190 ataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  1746111 ataatcaacaataacagcacctagatctaatctaggaa 1746148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 3303493 - 3303541
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 165  Q
    |||||||||||| || ||||||||||||||||||||| | |||||||||    
T  3303493 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaacca 3303541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 42498541 - 42498505
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42498541 tcacaccaatacaaaatatgatgtgtggagcaaagga 42498505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 30143686 - 30143579
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  30143686 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacaacacctagatc 30143590  T
Q  216 taatctaggaa 226  Q
    |||||||||||    
T  30143589 taatctaggaa 30143579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 34256393 - 34256436
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  34256393 caagcaataatcaacaataacagcacctagatctaatctaggaa 34256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 42498477 - 42498359
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagattaaaaggagagggaagaagaa 280  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| || |||| ||||||||||  ||||| | |    
T  42498477 caagcaataattaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaaga-taaaaggaga--gaagaggga 42498381  T
Q  281 aacaaagacaccaagagattgtt 303  Q
    |||||| ||||||| ||||||||    
T  42498380 aacaaacacaccaa-agattgtt 42498359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 18105962 - 18106022
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 243  Q
    |||||||||| |||||| |||||||||||||||||||||||||| | |||||| ||||||||    
T  18105962 caagcaataa-caacaataacatcacctagatctaatctaggaatcaaagtgaaaaacacaa 18106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 4743050 - 4743098
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 165  Q
    |||||||||||| || ||| ||||||||||||||||| | |||||||||    
T  4743050 tcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaacca 4743098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 5689613 - 5689577
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  5689613 tcacaccaatacaaactatgatgtgtggagcaaagga 5689577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 15213132 - 15213096
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  15213132 tcacaccaatacaaactatgatgtgtggagcaaagga 15213096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 32902096 - 32902132
Alignment:
Q  207 acctagatctaatctaggaaacaagtgagaaacacaa 243  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  32902096 acctagatctaatctaggaaccaagtgaaaaacacaa 32902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 41366440 - 41366476
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  41366440 tcacaccaatacaaactatgatgtgtggagcaaagga 41366476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 43036768 - 43036732
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  43036768 tcacaccaatacaaaaaatgatgtgtggagcaaagga 43036732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 44304137 - 44304097
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctag 223  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  44304137 caagcaataatcaacaataacaacacctagatctaatctag 44304097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 88 - 303
Target Start/End: Original strand, 31495097 - 31495319
Alignment:
Q  88 catgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 187  Q
    ||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||| | | ||||||| ||| |||||||||||||||||    
T  31495097 catgttgtgaattccgatctcaaatcgtgtcataccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccatcaa-caaagtgtgtgtgcaag 31495195  T
Q  188 caataatcaacaaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagat-------taaaaggagagggaagaaga 279  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| || || || |||||| ||||||||       ||||||||||||||||| ||    
T  31495196 caataatcaacaaaacagcacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaagataaaaggataaaaggagagggaagagga 31495295  T
Q  280 aaacaaagacaccaagagattgtt 303  Q
    ||||||||||||||||||||||||    
T  31495296 aaacaaagacaccaagagattgtt 31495319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 8395940 - 8395768
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  8395940 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagt 8395841  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||||  || ||||||||||||||||||||| | |||| |||||||||||    
T  8395840 gtgaaacacaaagcaacaatcacaagatacaatggagagggaagaagaaaacaataaacacaaagagattgtt 8395768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 8393731 - 8393559
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  8393731 atgatgtgtggagcgacggagagtggtaaccaccaaacgaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 8393632  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||||  || ||||||||||||||||||||| | |||| |||||||||||    
T  8393631 gtgaaacacaaagcaacaatcacaagatacaatggagagggaagaagaaaacaataaacacaaagagattgtt 8393559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 7125238 - 7125067
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  7125238 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 7125139  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||    
T  7125138 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 7125067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 134 - 285
Target Start/End: Complemental strand, 7123019 - 7122867
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  7123019 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 7122920  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa 285  Q
    | |||||||||  | ||||||||||||| || | | ||||||||||||||||||    
T  7122919 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaa 7122867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 13992113 - 13992218
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  13992113 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacagcacctagatc 13992209  T
Q  216 taatctagg 224  Q
    |||||||||    
T  13992210 taatctagg 13992218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 5136402 - 5136232
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| |  |||||||||||||| ||||||||||||||||| |||||    
T  5136402 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatcac-tagatctaatctaggaaccaagt 5136304  T
Q  233 gagaaacaca-atacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |   ||  || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  5136303 gtgaaacaaagcaaccaaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 5136232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 5138627 - 5138457
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| |  |||||||||||||| ||||||||||||||||| |||||    
T  5138627 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatcac-tagatctaatctaggaaccaagt 5138529  T
Q  233 gagaaacaca-atacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |   ||  || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  5138528 gtgaaacaaagcaaccaaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 5138457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 5369968 - 5370011
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  5369968 caagcaataatcaacaataacagcacctagatctaatctaggaa 5370011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 48143394 - 48143287
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  48143394 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacaacacctagatc 48143298  T
Q  216 taatctaggaa 226  Q
    |||||||||||    
T  48143297 taatctaggaa 48143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 26175459 - 26175495
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  26175459 tcacaccaatacaaactatgatgtgtggagcaaagga 26175495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 29999651 - 29999687
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  29999651 tcacaccaatacaaactatgatgtgtggagcaaagga 29999687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 48893465 - 48893501
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  48893465 tcacaccaatacaaactatgatgtgtggagcaaagga 48893501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 52467180 - 52467228
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 165  Q
    |||||||||||| || ||||||||||| ||||||||| | |||||||||    
T  52467180 tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtggtaacca 52467228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 56178458 - 56178494
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  56178458 tcacaccaatacaaactatgatgtgtggagcaaagga 56178494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 89 - 303
Target Start/End: Original strand, 3072551 - 3072762
Alignment:
Q  89 atgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagc 188  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||| | ||||||  ||||||||||||    
T  3072551 atgttgtgaattccgatctcaaatcgtgtcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagc 3072647  T
Q  189 aataatcaac-aaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaag 287  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||||| || || || |||||| ||||||| ||||||||||||||||| ||||||||||    
T  3072648 aataatcaacaaaaatagcacatagatctaatctaggaaacaagtgaaaagcataaaacacaagcacaaga-taaaaggagagggaagaggaaaacaaag 3072746  T
Q  288 acaccaagagattgtt 303  Q
    ||||||||||||||||    
T  3072747 acaccaagagattgtt 3072762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 27648187 - 27648025
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagtg 233  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27648187 atgatgtgtggagcaaaggagagtggtaaccaccgaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtg 27648088  T
Q  234 agaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    |||||| |||||      ||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  27648087 agaaactcaata------cacaaga-taaaaggagagggaagaagaaaacaaaagcaccaagagattgtt 27648025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 16555220 - 16555034
Alignment:
Q  118 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16555220 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16555123  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||    
T  16555122 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgtt 16555034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 16578335 - 16578521
Alignment:
Q  118 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||| || |||||||||| |||||||||||    
T  16578335 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt--gtgcaagcaacaaacaacaaaacaccacctagatct 16578432  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||    
T  16578433 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgtt 16578521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 16617045 - 16616859
Alignment:
Q  118 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16617045 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16616948  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||    
T  16616947 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgtt 16616859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 16631776 - 16631590
Alignment:
Q  118 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16631776 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16631679  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||    
T  16631678 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgtt 16631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 16653463 - 16653277
Alignment:
Q  118 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 216  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16653463 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16653366  T
Q  217 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||    
T  16653365 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgtt 16653277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 6097286 - 6097454
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa-catcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||||| ||| | | |||||||| || |||||||||||  ||||| ||||||||||||| || ||||| ||||||||||||| |||||||    
T  6097286 atgatgtgtggagcaacggaaagtagtaaccactaa-caaagtgtgtg--caagctataatcaacaaaaacagcaccttgatctaatctaggtaacaagt 6097382  T
Q  233 g-agaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    | | |||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||    
T  6097383 ggaaaaacacaatacacaatcacaagat-acaaggagagggaagaggaaaacaaagacaccaaagagattgtt 6097454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 25421642 - 25421471
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  25421642 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 25421543  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||    
T  25421542 gtgaaacacaaagcaacaatcacaagataaacaag-gagggaagaagaaaacaataaacacaaagagattgtt 25421471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 412434 - 412267
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 217  Q
    ||||||||||| || ||||||||||||||||||||| | | |||||||||||||||||||||||                   |||| ||||||||||||    
T  412434 cacaccaataccaagtatgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtg------------------caacagcacctagatcta 412353  T
Q  218 atctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacacc-aagagattgtt 303  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  412352 atctaggtaacaagtgaaaaacacaatacacaagcacaaga-taaaaggagagggaagaagaaaacaaatacaccaaagagattgtt 412267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 6027582 - 6027412
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | |||||  |||||||||| ||||| |||| | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  6027582 atgatgtgtggagcgacggagaggggtaaccacctaacaaggtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 6027483  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | ||||||||||||| ||| |  |||||||||||||||||| | |||| |||||||||||    
T  6027482 gtgaaacacaaagcaacaatcacaagataaaatg--gagggaagaagaaaacaataaacacaaagagattgtt 6027412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 34167416 - 34167245
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||||||   | | | |||||||| || |||||||||| |||||||||| |||||||||| |||||    
T  34167416 atgatgtgtggagcgacggagagtggtaaccaccaaacaaaaaatattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagt 34167317  T
Q  233 gagaaacacaataca-caatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  || |||||||||||| | ||||||||||||||||||||||| | |||| |||||||||||    
T  34167316 gtgaaacacaaagcaacaatcacaagat-acaaggagagggaagaagaaaacaataaacacaaagagattgtt 34167245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 303
Target Start/End: Original strand, 2171347 - 2171535
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||||||||||| | | ||||||| | ||||||  |||||||||||||||||||||||| |||| ||||||||    
T  2171347 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagcaataatcaacaataacagcacctaga 2171443  T
Q  214 tctaatctaggaaac-aagtg---agaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    ||||||||||||| | |||||   | ||||| || |||||| |||||||| ||| |||||  |||||   ||||||| ||||||||||||||||    
T  2171444 tctaatctaggaatcaaagtgaaaaaaaacataaaacacaagcacaagataaaagggaga--gaagagataaacaaatacaccaagagattgtt 2171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 33341935 - 33342106
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  33341935 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 33342034  T
Q  233 gagaaacacaatacacaatcacaagatta--aaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| |  |||||||||||||||||||||||| | |||| |||||||||    
T  33342035 gtgaaacaaagcaactaaacacaagataaacaaaggagagggaagaagaaaacaataaacacaaagagattg 33342106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 13154251 - 13154082
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||  | | | |||||||| || |||||| ||| |||||||||| |||||||||| |||||    
T  13154251 atgatgtgtggagcgacggagagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagt 13154152  T
Q  233 gagaaacacaataca-caatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||||||  || |||||||||||| | ||||||||||||||||||||||| | |||| |||||||||    
T  13154151 gtgaaacacaaagcaacaatcacaagat-acaaggagagggaagaagaaaacaataaacacaaagagattg 13154082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 6136135 - 6136216
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgt-gtgtgcaagcaataatcaacaaaacatcacctagat 214  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| || |||||||||| |||||||||    
T  6136135 atgatgtgtggagcaacggagagtggtaaccaccaaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 30834333 - 30834459
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    |||||||||||||| |||||||     |||||||||||| |||||||||||||||||||||||| ||| |||||||   ||||||  |||  ||||||||    
T  30834333 tgttgtgaatttcggtctcaaaa----tcacaccaatacgaaatatgatgtgtggagcaaaggaaaatagtaacca-ataacaaa--gtgaatgcaagca 30834425  T
Q  190 ataatcaacaa-aacatcacctagatctaatcta 222  Q
    ||||||||||| |||| |||||||||||||||||    
T  30834426 ataatcaacaataacagcacctagatctaatcta 30834459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 34165194 - 34165025
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  34165194 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 34165096  T
Q  233 gagaaacacaatacacaatcacaagattaa-aaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||| |  |   || |||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  34165095 gtgaaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacacaaagagattg 34165025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 16452127 - 16452257
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| ||||||||||     |||||||||||| || |||||||||||||| |||||| | | |||||||  || |||||||  |   ||||||    
T  16452127 tgttgtgaattccgatctcaaaa----tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataa-caaagtgaata--caagca 16452219  T
Q  190 ataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  16452220 ataatcaacaataacatcacctagatctaatctaggaa 16452257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 5408890 - 5408999
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  |  ||||||| |    ||||||||||||||||| |||| ||||||||    
T  5408890 agtcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgagca--caagcaataatcaacaataacaacacctaga 5408986  T
Q  214 tctaatctaggaa 226  Q
    |||||||||||||    
T  5408987 tctaatctaggaa 5408999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 5413215 - 5413324
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  |  ||||||| |    ||||||||||||||||| |||| ||||||||    
T  5413215 agtcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgagca--caagcaataatcaacaataacaacacctaga 5413311  T
Q  214 tctaatctaggaa 226  Q
    |||||||||||||    
T  5413312 tctaatctaggaa 5413324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 9182917 - 9182960
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  9182917 caagcaataatcaacaataacaacacctagatctaatctaggaa 9182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 31404561 - 31404604
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  31404561 caagcaataatcaacaataacagcacctagatctaatctaggaa 31404604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 33160177 - 33160221
Alignment:
Q  121 accaatactaaatatgatgtgtggagcaaaggagaatggtaacca 165  Q
    |||||||| || ||||||||||||||||||||| ||| |||||||    
T  33160177 accaatacaaactatgatgtgtggagcaaaggaaaatagtaacca 33160221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 133 - 303
Target Start/End: Complemental strand, 6267024 - 6266856
Alignment:
Q  133 tatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  6267024 tatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgt--aagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagt 6266927  T
Q  233 gagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaac-aaagacaccaagagattgtt 303  Q
    || ||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  6266926 gaaaaacacaatacacaagcacaaga-taaacggagagggaagaagaaaacaaaagacaccaagagattgtt 6266856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 4484150 - 4484333
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  4484150 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacaacacctagatc 4484246  T
Q  216 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    ||||||||||||| |||||| || || ||  ||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  4484247 taatctaggaaacaaagtgaaaagcaaaaaccacaagcacaaga-taaaaggagagggaagaagaaaacaaagacaccaa-agattgtt 4484333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 12647218 - 12647389
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  12647218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 12647317  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattgtt 303  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||    
T  12647318 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattgtt 12647389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 117 - 303
Target Start/End: Complemental strand, 30833694 - 30833511
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||  ||  |   |||| |||||||||||||||||||| |||| ||||||||||    
T  30833694 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccattaatta---tgtgagtgcaagcaataatcaacaataacaacacctagatc 30833598  T
Q  216 taatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    ||||||||||||||| |||| || |||||  ||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  30833597 taatctaggaaacaaagtgaaaagcacaaaccacaagcacaagat-aaaaggagagggaagaggaaaacaaagacaccaa-agattgtt 30833511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 32289937 - 32289729
Alignment:
Q  90 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 189  Q
    ||||||||||| |||||||||| |    ||||||||||| || || |||||||||||||||||| | | |||||||| || ||||||| |||  ||||||    
T  32289937 tgttgtgaattccgatctcaaaac----cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagca 32289845  T
Q  190 ataatcaacaa-aacatcacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaag 287  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| || || || |||||| |||||||| |||||||||||||||| |||||||| |    
T  32289844 ataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaagat-aaaaggagagggaagaggaaaacaagg 32289746  T
Q  288 acacc-aagagattgtt 303  Q
    ||||| |||||||||||    
T  32289745 acaccaaagagattgtt 32289729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 285
Target Start/End: Original strand, 13655861 - 13656015
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||| ||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  13655861 atgatgtgtggagcgacggagagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 13655960  T
Q  233 gagaaacacaatac-acaatcacaagattaa-aaggagagggaagaagaaaacaa 285  Q
    | |||||||||  | ||||||||||||| || |||||||||||||||||||||||    
T  13655961 gtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaa 13656015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 117 - 270
Target Start/End: Original strand, 4502955 - 4503106
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||| |||||||||| |||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  4502955 tcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 4503051  T
Q  216 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 270  Q
    ||||||||||||| |||||| || ||||| |||||| ||||||| |||||||||||    
T  4503052 taatctaggaaacaaagtgaaaagcacaaaacacaagcacaaga-taaaaggagag 4503106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 17057255 - 17057298
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  17057255 caagcaataatcaacaataacagcacctagatctaatctaggaa 17057298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 17085238 - 17085281
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  17085238 caagcaataatcaacaataacagcacctagatctaatctaggaa 17085281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 36205551 - 36205594
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  36205551 caagcaataatcaacaataacagcacctagatctaatctaggaa 36205594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 36987961 - 36988004
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 226  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  36987961 caagcaataatcaacaataacaacacctagatctaatctaggaa 36988004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 45100100 - 45099993
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 215  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  45100100 tcacaccaatacgaattatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacagcacctagatc 45100004  T
Q  216 taatctaggaa 226  Q
    |||||||||||    
T  45100003 taatctaggaa 45099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 723569 - 723605
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  723569 tcacaccaatacaaactatgatgtgtggagcaaagga 723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 11690833 - 11690797
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  11690833 tcacaccaatacaaactatgatgtgtggagcaaagga 11690797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 17057191 - 17057227
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  17057191 tcacaccaatacaaaatatgatgtgtagagcaaagga 17057227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 17085174 - 17085210
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  17085174 tcacaccaatacaaaatatgatgtgtagagcaaagga 17085210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 24885931 - 24885883
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 165  Q
    |||||||||||| || ||||||||||| ||||||||| ||| |||||||    
T  24885931 tcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaacca 24885883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 34139595 - 34139631
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  34139595 tcacaccaatacaaactatgatgtgtggagcaaagga 34139631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 36987897 - 36987933
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  36987897 tcacaccaatacaaactatgatgtgtggagcaaagga 36987933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 42362691 - 42362655
Alignment:
Q  117 tcacaccaatactaaatatgatgtgtggagcaaagga 153  Q
    |||||||||||| || |||||||||||||||||||||    
T  42362691 tcacaccaatacaaactatgatgtgtggagcaaagga 42362655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 134 - 285
Target Start/End: Original strand, 2436 - 2588
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  2436 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 2535  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa 285  Q
    | |||||||||  | |||||||||||| || |||||||||||||||||||||||    
T  2536 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaa 2588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 201 - 32
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  201 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 102  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  101 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattg 32  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 3558 - 3727
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  3558 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 3657  T
Q  233 gagaaacacaatac-acaatcacaagattaaaaggagagggaagaagaaaacaa-agacaccaagagattg 301  Q
    | |||||||||  | |||||||||||| || ||||||||||||||||||||||| | |||| |||||||||    
T  3658 gtgaaacacaaagcaacaatcacaaga-tacaaggagagggaagaagaaaacaataaacacaaagagattg 3727  T

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Target: scaffold0137 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 301
Target Start/End: Complemental strand, 6611 - 6440
Alignment:
Q  134 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 232  Q
    ||||| |||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||| ||| |||||||||| ||||||||||||||||    
T  6611 atgatatgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagt 6512  T
Q  233 gagaaacacaatac-acaatcacaagattaa--aaggagagggaagaagaaaacaaagacaccaagagattg 301  Q
    | |||||||||  | ||||||||||||| ||  |||||||||||||||||||||||  |||| |||||||||    
T  6511 gtgaaacacaaagcaacaatcacaagataaaacaaggagagggaagaagaaaacaataacacaaagagattg 6440  T

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Target: scaffold0491 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 10982 - 11164
Alignment:
Q  118 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 216  Q
    ||||||||||| || |||||| |||||||||||||| | | |||||||   |  ||   ||| |||||||||||||||||||| |||| |||||||||||    
T  10982 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaatgactaa---gtgggtgcaagcaataatcaacaataacaacacctagatct 11078  T
Q  217 aatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaagaaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||| |||| ||||||||  ||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  11079 aatctaggaaacaaagtgaaaaacacaaaccacaagcacaagat-aaaaggagagggaagaggaaaacaaagacaccaa-agattgtt 11164  T

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Target: scaffold0491; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 8616 - 8738
Alignment:
Q  181 gtgcaagcaataatcaacaa-aacatcacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagattaaaaggagagggaagaag 278  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || |||||  ||||| |||||||| ||||| |||||||||| |    
T  8616 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagat-aaaagaagagggaagagg 8714  T
Q  279 aaaacaaagacaccaagagattgtt 303  Q
    |||||||||||||||| ||||||||    
T  8715 aaaacaaagacaccaa-agattgtt 8738  T

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Target: scaffold0286 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 11914 - 11804
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||||||||||| | | ||||||| | ||||||  |||||||||||||||||||||||| |||| ||||||||    
T  11914 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagcaataatcaacaataacagcacctaga 11818  T
Q  214 t-ctaatctaggaa 226  Q
    | ||||||||||||    
T  11817 tactaatctaggaa 11804  T

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Target: scaffold0002 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 270
Target Start/End: Complemental strand, 434882 - 434728
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  |   ||   |||| | ||| ||||||||||||| |||| ||||||||    
T  434882 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccattattaaa---gtgttttcaatcaataatcaacaataacagcacctaga 434786  T
Q  214 tctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 270  Q
    ||||||||||||| | |||||| || ||||| |||||| |||||||| ||| ||||||    
T  434785 tctaatctaggaatcaaagtgaaaagcacaaaacacaagcacaagataaaagggagag 434728  T

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Target: scaffold1519 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 1264 - 1157
Alignment:
Q  115 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 213  Q
    |||||||||||||| || ||||||||||||| ||||||| | | |||||||   |  | | ||||  ||||||||||||||||||| |||| ||||||||    
T  1264 agtcacaccaatacgaactatgatgtgtggaacaaaggatagtagtaacca---atgacaatgtgaatgcaagcaataatcaacaataacaccacctaga 1168  T
Q  214 tctaatctagg 224  Q
    |||||||||||    
T  1167 tctaatctagg 1157  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 20301 - 20362
Alignment:
Q  184 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 243  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  20301 caagcaataattaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 20362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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