View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1317_low_77 (Length: 213)
Name: NF1317_low_77
Description: NF1317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1317_low_77 |
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Alignment Details
Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33887637 - 33887555
Alignment:
| Q |
1 |
cactccgctgttgacttgctgcagctccggcaaggttactgaaaccgacgacgatgacgttaaggagctcgacactacaccgttagatc |
89 |
Q |
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| T |
33887637 |
cactccgctgttgacttgctgcagctccggcaaggttactgaaaccaac------gacgttaaggagctcgacactacaccgttagatc |
33887555 |
T |
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