View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1317_low_8 (Length: 534)

Name: NF1317_low_8
Description: NF1317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1317_low_8
NF1317_low_8
[»] chr8 (7 HSPs)
chr8 (12-461)||(12333255-12333704)
chr8 (12-457)||(36493788-36494233)
chr8 (64-142)||(20825759-20825837)
chr8 (298-401)||(17660534-17660637)
chr8 (40-142)||(4986668-4986770)
chr8 (77-142)||(17660313-17660378)
chr8 (76-128)||(15540386-15540438)
[»] chr2 (5 HSPs)
chr2 (12-453)||(10689945-10690381)
chr2 (13-419)||(19852148-19852554)
chr2 (271-454)||(13838427-13838609)
chr2 (348-401)||(6825116-6825169)
chr2 (78-206)||(7458051-7458179)
[»] scaffold0061 (2 HSPs)
scaffold0061 (198-468)||(60401-60671)
scaffold0061 (28-201)||(58106-58279)
[»] scaffold0017 (2 HSPs)
scaffold0017 (198-468)||(137962-138232)
scaffold0017 (28-201)||(140354-140527)
[»] chr3 (7 HSPs)
chr3 (12-457)||(6826219-6826664)
chr3 (67-142)||(30165926-30166001)
chr3 (316-386)||(961522-961592)
chr3 (64-142)||(12333691-12333769)
chr3 (316-401)||(27924158-27924243)
chr3 (295-347)||(16186001-16186053)
chr3 (99-143)||(23921839-23921883)
[»] scaffold0746 (2 HSPs)
scaffold0746 (12-208)||(1493-1689)
scaffold0746 (405-460)||(1325-1380)
[»] scaffold0070 (2 HSPs)
scaffold0070 (12-208)||(27513-27709)
scaffold0070 (405-460)||(27822-27877)
[»] chr4 (14 HSPs)
chr4 (289-383)||(20508333-20508427)
chr4 (67-142)||(7661911-7661986)
chr4 (283-386)||(19732347-19732450)
chr4 (289-431)||(29327135-29327276)
chr4 (291-389)||(8811943-8812041)
chr4 (75-217)||(20397035-20397177)
chr4 (78-140)||(26695401-26695463)
chr4 (40-140)||(8936509-8936609)
chr4 (55-142)||(19649145-19649232)
chr4 (64-146)||(3128594-3128676)
chr4 (303-401)||(10561669-10561767)
chr4 (86-142)||(14538963-14539020)
chr4 (85-142)||(40689547-40689604)
chr4 (38-142)||(10561928-10562032)
[»] chr5 (9 HSPs)
chr5 (316-386)||(33171369-33171439)
chr5 (28-142)||(30508626-30508740)
chr5 (28-142)||(30548969-30549083)
chr5 (289-383)||(12833585-12833679)
chr5 (295-383)||(27164457-27164545)
chr5 (289-383)||(12865563-12865657)
chr5 (85-142)||(36257255-36257312)
chr5 (29-128)||(381325-381424)
chr5 (64-142)||(25856042-25856120)
[»] chr1 (3 HSPs)
chr1 (25-142)||(32643291-32643408)
chr1 (27-142)||(5498436-5498551)
chr1 (77-142)||(36191402-36191467)
[»] chr7 (7 HSPs)
chr7 (28-206)||(43572964-43573142)
chr7 (38-142)||(45994009-45994113)
chr7 (40-142)||(13441493-13441595)
chr7 (77-142)||(17722107-17722172)
chr7 (38-142)||(34233134-34233238)
chr7 (106-145)||(38429740-38429779)
chr7 (361-401)||(12377321-12377361)
[»] scaffold0131 (1 HSPs)
scaffold0131 (64-142)||(3161-3239)
[»] scaffold0112 (1 HSPs)
scaffold0112 (28-142)||(14269-14383)
[»] chr6 (10 HSPs)
chr6 (316-386)||(13939428-13939498)
chr6 (64-142)||(17576320-17576398)
chr6 (274-386)||(34601730-34601842)
chr6 (274-386)||(34628272-34628384)
chr6 (274-386)||(34723006-34723118)
chr6 (40-142)||(26206767-26206869)
chr6 (97-142)||(5390101-5390146)
chr6 (77-142)||(11059465-11059530)
chr6 (91-143)||(12150081-12150133)
chr6 (276-316)||(20587077-20587117)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-81)||(29184-29250)
[»] scaffold0007 (2 HSPs)
scaffold0007 (87-141)||(183597-183651)
scaffold0007 (171-217)||(183681-183727)


Alignment Details
Target: chr8 (Bit Score: 426; Significance: 0; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 12 - 461
Target Start/End: Original strand, 12333255 - 12333704
Alignment:
Q  12 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12333255 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 12333354  T
Q  112 tcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatctaaaa 211  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12333355 tcatacgctttttcgaaatccaccttaaacagcaataactccttttttaatctggacgcctcatcgaccacctcatttgctataagaatcccatctaaaa 12333454  T
Q  212 tttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgccaaaactttataaac 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  12333455 tttgtcgactccgaacgaaagctgactgttcttctgcaaccacaattcctatcacttgccgcagtctactagctagaaccttcgccaaaactttataaac 12333554  T
Q  312 actacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaac 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12333555 actacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaac 12333654  T
Q  412 ttcccatttcgatgaaattctcccataaaccgcataatatcctgcttcat 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12333655 ttcccatttcgatgaaattctcccataaaccgcataatatcctgcttcat 12333704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 12 - 457
Target Start/End: Original strand, 36493788 - 36494233
Alignment:
Q  12 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 111  Q
    ||||||||||| ||||||||||||  |||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| |||    
T  36493788 agctgttgcagtcgaaacacattcgttaatccattttctccagagaacagggaaagacattctctccataaccgcatccaaatacccccagtcaaccgaa 36493887  T
Q  112 tcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatctaaaa 211  Q
    || || ||||||||||||||||||||||| | || ||  ||| ||||||||||||| |  ||||| ||||||||||| || || | ||||||||||||||    
T  36493888 tcgtaagctttttcgaaatccaccttaaataacagtagctccttttttaatctggaggcttcatcaaccacctcattggcaattaaaatcccatctaaaa 36493987  T
Q  212 tttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgccaaaactttataaac 311  Q
    | || ||| |  |||| ||||| ||||| ||    || || || |  || |||||||| || || ||| |||| ||||| ||||| ||||||||||| |     
T  36493988 tctgccgattttgaacaaaagccgactgctcagaggccacaactgaaccgatcacttgccgcagcctattagcaagaactttcgctaaaactttatagat 36494087  T
Q  312 actacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaac 411  Q
     || || ||||||||||| || ||  | ||||| ||  ||  |||    || | ||| |||||||| || |||||||||||||||||||| || |||| |    
T  36494088 gctgcctaccagcgaaatagggcgatagtcatttaaattccgaggatgatctatttttggaataagcgcgataaaagttgagttaatacctcgagacagc 36494187  T
Q  412 ttcccatttcgatgaaattctcccataaaccgcataatatcctgct 457  Q
    |||||||||||||| |||||| |||||||| ||||||| |||||||    
T  36494188 ttcccatttcgatggaattctaccataaactgcataatgtcctgct 36494233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 20825759 - 20825837
Alignment:
Q  64 aacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||||||| |||||||  | || | |||||||||||||||||| |||||||| || || |||||||| |||||||    
T  20825759 aacgacatcctaaccataacctcctcaagatacccccagtcaactgagtcatacgccttctcaaaatccactttaaaca 20825837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 401
Target Start/End: Original strand, 17660534 - 17660637
Alignment:
Q  298 aaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaa 397  Q
    |||| |||||||| |||||||||||  ||||| ||||| |||||||| |  | || |||  ||||||| |||||||| || || |||||||| |||||||    
T  17660534 aaaattttataaagactacccaccaaagaaataggacgaaaatcattaaggcgctgaggattgtcaaccttaggaatgagggctataaaagtggagttaa 17660633  T
Q  398 tacc 401  Q
    ||||    
T  17660634 tacc 17660637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 4986770 - 4986668
Alignment:
Q  40 atccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaa 139  Q
    |||||||| | ||| ||||| ||||| |||||| || ||| ||| | ||||||||||||||| ||||  || ||||| || ||||| |||||||| ||||    
T  4986770 atccattttcgccagagaactgggaaagacatcttagccaaaacagaatccaaatacccccaatcaatcgagtcataagccttttcaaaatccactttaa 4986671  T
Q  140 aca 142  Q
    |||    
T  4986670 aca 4986668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 17660313 - 17660378
Alignment:
Q  77 ccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||||| | ||||||||| ||||| || || |||||||| || ||||| ||||||||||||||||    
T  17660313 ccataacagaatccaaataaccccaatcgacagaatcataggccttttcaaaatccaccttaaaca 17660378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 15540386 - 15540438
Alignment:
Q  76 tccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaa 128  Q
    |||||||| ||||||| ||||||||| || |||||||| || |||||||||||    
T  15540386 tccataaccgcatccagatacccccaatccactgaatcgtaagctttttcgaa 15540438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 12 - 453
Target Start/End: Original strand, 10689945 - 10690381
Alignment:
Q  12 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 111  Q
    ||||||||||| ||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  10689945 agctgttgcagtcgatacacattccttaatccacttcctccaaagaacgaggaacgacatcctatccataaccgcatccagatacccccaatcaactgaa 10690044  T
Q  112 tcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatctaaaa 211  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| |  |     ||||| |||||||||||||||||||    
T  10690045 tcatacgctttttcgaaatccaccttaaacaacaataattccttttttaatctggacgcctcatccaaaa-----tttgcaataagaatcccatctaaaa 10690139  T
Q  212 tttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgccaaaactttataaac 311  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||  || |||||||| |  | |||||| || ||||||||||||||||||||||||||    
T  10690140 tttgtcgactacgaacgaaagctgactgttcttctgcaacaacagagcccatcacttgccacaatctactggcaagaaccttcgccaaaactttataaac 10690239  T
Q  312 actacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaac 411  Q
    ||||||||||| |||||||||||| || ||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||| ||||||||| || |||||     
T  10690240 actacccaccaacgaaatgggacgaaagtcattcaatttctgagggctgtcaattttagaaataagagcaataaaaattgtgttaatacctcgcgacaat 10690339  T
Q  412 ttcccatttcgatgaaattctcccataaaccgcataatatcc 453  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  10690340 ttcccattttgatgaaattctcccataaaccgcataatatcc 10690381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 13 - 419
Target Start/End: Complemental strand, 19852554 - 19852148
Alignment:
Q  13 gctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaat 112  Q
    |||| ||||| ||| ||||||||| ||||||| |||||||||||||| || ||||||||||| ||||| || ||||||| |||||| |||||||| || |    
T  19852554 gctgctgcagtcgagacacattccttaatccacttcctccaaagaacaggaaacgacatcctctccatgaccgcatccagataccctcagtcaaccgagt 19852455  T
Q  113 catacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatctaaaat 212  Q
    | ||||||||||| ||||||||||| |||| ||| |  ||| | || |||||||| |  ||||| |||||||||||||| || ||||| || || | |||    
T  19852454 cgtacgctttttcaaaatccaccttgaacaacaaaagttccttattaaatctggatgcttcatccaccacctcatttgcaatcagaattccgtcaagaat 19852355  T
Q  213 ttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgccaaaactttataaaca 312  Q
     |||| | | ||||| ||||||||||| ||||| |  ||||| || || |||||||| || | |||| |||| |||||||||||||||||||||||||      
T  19852354 ctgtctattacgaacaaaagctgactgctcttccgacaccaccgtaccgatcacttggcgcaatctattagcaagaaccttcgccaaaactttataaatg 19852255  T
Q  313 ctacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaact 412  Q
    || ||||||| ||| || || ||  | ||||||||| ||  |||| |||||| |||||||||||| ||||||||| |||| |||||||| | |||||| |    
T  19852254 cttcccaccaacgagatcggtcgatagtcattcaatttccgagggttgtcaattttaggaataagcgcaataaaatttgaattaataccccttgacaatt 19852155  T
Q  413 tcccatt 419  Q
    |||||||    
T  19852154 tcccatt 19852148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 271 - 454
Target Start/End: Complemental strand, 13838609 - 13838427
Alignment:
Q  271 cgtagtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttag 370  Q
    ||||||||| |||| || ||||||||||||| ||||||||  || ||||| |  ||||||||||| || ||||||||| | |  ||| | |||| |||      
T  13838609 cgtagtctattagcaaggaccttcgccaaaattttataaaggctccccacgaaagaaatgggacgaaagtcattcaatttttgcgggttatcaattttca 13838510  T
Q  371 gaataagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcct 454  Q
    | || |||||||| ||||  || || ||||| | |||||||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  13838509 ggattagagcaatgaaagaagaatttatacctcttgacaacttcccatttcgatgaaactctaccataaa-cgcataatgtcct 13838427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 401
Target Start/End: Original strand, 6825116 - 6825169
Alignment:
Q  348 tctcttagggctgtcaactttaggaataagagcaataaaagttgagttaatacc 401  Q
    ||||| |||||| |||||||| || ||||||||||||||||| | |||||||||    
T  6825116 tctctgagggctatcaacttttggtataagagcaataaaagtagtgttaatacc 6825169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 206
Target Start/End: Original strand, 7458051 - 7458179
Alignment:
Q  78 cataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcg 177  Q
    |||||||||||||| ||| ||||| || | ||| || || ||||| |  |||||||||||||| ||||  || ||||| ||| || ||   | ||||||     
T  7458051 cataactgcatccagataaccccaatctattgagtcgtatgctttcttaaaatccaccttaaagagcatcaactccctatttgatttgcgagcctcatcc 7458150  T
Q  178 accacctcatttgctataagaatcccatc 206  Q
    |||||||||||||| || |||||||||||    
T  7458151 accacctcatttgcaatgagaatcccatc 7458179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 131; Significance: 1e-67; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 198 - 468
Target Start/End: Original strand, 60401 - 60671
Alignment:
Q  198 aatcccatctaaaatttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgcc 297  Q
    |||| ||||||||||||||| |||| ||||||||| |||||||||||||||||| |||   || || |||||||| |  ||||  || |||||||| |||    
T  60401 aatctcatctaaaatttgtctactctgaacgaaagttgactgttcttctgcaacaacaaaacccataacttgtcgcaacctacgtgcaagaacctttgcc 60500  T
Q  298 aaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaa 397  Q
    ||||||||||||| ||||||||||||||||||||| || || ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  60501 aaaactttataaatactacccaccagcgaaatggggcgaaagtcattcaatttctgagggctgtcaattttaggaataagagcaataaaagttgagttaa 60600  T
Q  398 taccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttcatctcactc 468  Q
    |||| | ||| || | |||||| || |||||||| ||||||||||| | ||||||||||||||| ||||||    
T  60601 tacctcttgataattccccattgcggtgaaattcccccataaaccgaaaaatatcctgcttcatgtcactc 60671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 58106 - 58279
Alignment:
Q  28 acacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcga 127  Q
    ||||||||  ||||| | || ||||| || |||||||||||||| || |||||||| ||||| |  |||||||||||||||||||||||| | |||||||    
T  58106 acacattctttaatctactttctccagagcacggggaacgacattctttccataaccgcatctaggtacccccagtcaactgaatcatacaccttttcga 58205  T
Q  128 aatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatc 201  Q
    |||||||||| |||| ||| |  |||  |||||||||||| | |||||| |||||||||||||| |||||||||    
T  58206 aatccaccttgaacaacaacacctcctgttttaatctggatgcctcatctaccacctcatttgcaataagaatc 58279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 131; Significance: 1e-67; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 198 - 468
Target Start/End: Complemental strand, 138232 - 137962
Alignment:
Q  198 aatcccatctaaaatttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgcc 297  Q
    |||| ||||||||||||||| |||| ||||||||| |||||||||||||||||| |||   || || |||||||| |  ||||  || |||||||| |||    
T  138232 aatctcatctaaaatttgtctactctgaacgaaagttgactgttcttctgcaacaacaaaacccataacttgtcgcaacctacgtgcaagaacctttgcc 138133  T
Q  298 aaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaa 397  Q
    ||||||||||||| ||||||||||||||||||||| || || ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  138132 aaaactttataaatactacccaccagcgaaatggggcgaaagtcattcaatttctgagggctgtcaattttaggaataagagcaataaaagttgagttaa 138033  T
Q  398 taccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttcatctcactc 468  Q
    |||| | ||| || | |||||| || |||||||| ||||||||||| | ||||||||||||||| ||||||    
T  138032 tacctcttgataattccccattgcggtgaaattcccccataaaccgaaaaatatcctgcttcatgtcactc 137962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 28 - 201
Target Start/End: Complemental strand, 140527 - 140354
Alignment:
Q  28 acacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcga 127  Q
    ||||||||  ||||| | || ||||| || |||||||||||||| || |||||||| ||||| |  |||||||||||||||||||||||| | |||||||    
T  140527 acacattctttaatctactttctccagagcacggggaacgacattctttccataaccgcatctaggtacccccagtcaactgaatcatacaccttttcga 140428  T
Q  128 aatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatc 201  Q
    |||||||||| |||| ||| |  |||  |||||||||||| | |||||| |||||||||||||| |||||||||    
T  140427 aatccaccttgaacaacaacacctcctgttttaatctggatgcctcatctaccacctcatttgcaataagaatc 140354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 8e-53; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 12 - 457
Target Start/End: Original strand, 6826219 - 6826664
Alignment:
Q  12 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 111  Q
    ||||||||||| ||||||||||||| |||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||| ||||||||||| |||    
T  6826219 agctgttgcagtcgaaacacattccttaatccattttctccagagaacagggaaagacattctctccataaccgcatccaaatatccccagtcaaccgaa 6826318  T
Q  112 tcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatctaaaa 211  Q
    || || ||||||||||||||||||||||| | || ||  ||| |||||||||  || |  ||||| ||||||||||| || || | ||||||||||||||    
T  6826319 tcgtaagctttttcgaaatccaccttaaataacagtagctccttttttaatcaagaggcttcatctaccacctcattggcaattaaaatcccatctaaaa 6826418  T
Q  212 tttgtcgactccgaacgaaagctgactgttcttctgcaaccacagttcctatcacttgtcgtagtctactagctagaaccttcgccaaaactttataaac 311  Q
    | || ||| |  |||| ||||||||||| ||    || || || |  || |||||||| || |  ||| |||| ||||| ||||| ||||||||||| |     
T  6826419 tctgccgattttgaacaaaagctgactgctcagaggccacaactgaaccgatcacttgccgcaacctattagcaagaactttcgctaaaactttatagat 6826518  T
Q  312 actacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaac 411  Q
     || || || || |||||||| ||  | ||||| ||| | | |||    || ||||| |||||||| || ||||||||  |||||||||| || |||| |    
T  6826519 gctgcctactagtgaaatggggcgatagtcatttaatttttgaggatgatctacttttggaataagcgcgataaaagtatagttaatacctcgagacagc 6826618  T
Q  412 ttcccatttcgatgaaattctcccataaaccgcataatatcctgct 457  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||    
T  6826619 ttcccatttcgatggaattctaccataaaccgcataatgtcctgct 6826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 30166001 - 30165926
Alignment:
Q  67 gacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||| |||||||| ||||||||||| ||||| ||||  |||||||| |||||||| ||||| ||||||||||    
T  30166001 gacatcctctccataacggcatccaaataaccccaatcaatagaatcatatgctttttcaaaatcgaccttaaaca 30165926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 961592 - 961522
Alignment:
Q  316 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaa 386  Q
    ||||||| | ||||||| |  |||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  961592 cccaccaacaaaatgggtcaaaaatcattcaatgtctgaggactgtcaactttaggaataagagcaataaa 961522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 12333769 - 12333691
Alignment:
Q  64 aacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||| ||| |||||||  | || | |||||||||||||||||| |||||||| ||||| |||||||| |||||||    
T  12333769 aacgacatactaaccataacctcctcaagatacccccagtcaactgagtcatacgccttttcaaaatccactttaaaca 12333691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 316 - 401
Target Start/End: Complemental strand, 27924243 - 27924158
Alignment:
Q  316 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaatacc 401  Q
    |||||||| ||||| ||  | |||||||| ||  |||||||||| || ||||||||||| |||||||||||||||| ||| |||||    
T  27924243 cccaccagagaaataggctgaaaatcattaaacttcttagggctatctactttaggaattagagcaataaaagttgtgttgatacc 27924158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 16186001 - 16186053
Alignment:
Q  295 gccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaa 347  Q
    ||||||| |||||||| ||||||||||| ||||||||| || |||||||||||    
T  16186001 gccaaaattttataaagactacccaccaacgaaatgggtcgaaaatcattcaa 16186053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 23921839 - 23921883
Alignment:
Q  99 ccagtcaactgaatcatacgctttttcgaaatccaccttaaacag 143  Q
    ||||||||| ||||||||||| ||||| |||||||| ||||||||    
T  23921839 ccagtcaaccgaatcatacgccttttcaaaatccactttaaacag 23921883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 1689 - 1493
Alignment:
Q  12 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 111  Q
    ||||||||||| ||||||||||||| ||||||| || ||||| | |||  |||| ||||| || |||||||| ||||||||||||||||||||||| |||    
T  1689 agctgttgcagtcgaaacacattccttaatccactttctccagataacaaggaaagacattctctccataaccgcatccaaatacccccagtcaaccgaa 1590  T
Q  112 tcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatcta 208  Q
    ||||| ||||||||||||||||||||||| | || ||||||| |||||||| |||||| |||||| |||||||||||||| || |||||||||||||    
T  1589 tcataagctttttcgaaatccaccttaaataacagtaaatccttttttaatttggacgcctcatccaccacctcatttgcaattagaatcccatcta 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 1380 - 1325
Alignment:
Q  405 tgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttca 460  Q
    ||||||||||||||||||||| |||||| | | |||||||||||| ||||||||||    
T  1380 tgacaacttcccatttcgatggaattctacaagaaaccgcataatgtcctgcttca 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 27513 - 27709
Alignment:
Q  12 agctgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaa 111  Q
    ||||||||||| ||||||||||||| ||||||| || ||||| | |||  |||| ||||| || |||||||| ||||||||||||||||| ||||| |||    
T  27513 agctgttgcagtcgaaacacattccttaatccactttctccagataacaaggaaagacattctctccataaccgcatccaaatacccccaatcaaccgaa 27612  T
Q  112 tcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatcta 208  Q
    ||||| ||||||||||||||||||||||| | || ||||||| ||||||||||||||| |||||| |||||||||||||| || |||||||||||||    
T  27613 tcataagctttttcgaaatccaccttaaataacagtaaatccttttttaatctggacgcctcatccaccacctcatttgcaattagaatcccatcta 27709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 27822 - 27877
Alignment:
Q  405 tgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttca 460  Q
    ||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  27822 tgacagcttcccatttcgatggaattctacaataaaccgcataatatcctgcttca 27877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 289 - 383
Target Start/End: Complemental strand, 20508427 - 20508333
Alignment:
Q  289 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 383  Q
    ||||||||||| |  ||||| | |||||||||||||||||| ||||||||||||||||| | || |||||||||||  |||||||||||||||||    
T  20508427 accttcgccaatatcttatacaaactacccaccagcgaaatcggacggaaatcattcaaccgctgagggctgtcaatcttaggaataagagcaat 20508333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 7661986 - 7661911
Alignment:
Q  67 gacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||| |||||||| || |||||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  7661986 gacatcctctccataacggcgtccaaataaccccaatcaacagaatcatacgctttttcaaaatcgaccttaaaca 7661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 19732450 - 19732347
Alignment:
Q  283 gctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaa 382  Q
    ||||||||||| ||||||| |||||| | ||  ||||||| ||||||||| |  |||||||||||  ||  ||| ||||| |||||||||||||||||||    
T  19732450 gctagaacctttgccaaaattttatagagacatcccaccaacgaaatgggtcaaaaatcattcaaagtccgaggactgtctactttaggaataagagcaa 19732351  T
Q  383 taaa 386  Q
    ||||    
T  19732350 taaa 19732347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 431
Target Start/End: Complemental strand, 29327276 - 29327135
Alignment:
Q  289 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaag 388  Q
    ||||| ||||||| ||||||||  || |||||||  |||| |||||| ||||||| |||| | |||||| |||||| ||| ||||| |||||||| ||||    
T  29327276 acctttgccaaaattttataaatgctccccaccaaggaaaagggacgaaaatcatacaattttttagggttgtcaatttttggaatgagagcaat-aaag 29327178  T
Q  389 ttgagttaataccgcgtgacaacttcccatttcgatgaaattc 431  Q
    | || |||||||| |  ||||| || ||||| |||||||||||    
T  29327177 tagaattaatacctctcgacaattttccattccgatgaaattc 29327135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 8812041 - 8811943
Alignment:
Q  291 cttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagt 389  Q
    ||||||||||| |||||| | |||||||||||  |||||||||||||| |||||||| |  |  ||  | ||||| ||||||||||| |||||||||||    
T  8812041 cttcgccaaaattttatacatactacccaccaatgaaatgggacggaagtcattcaaacgttgtggattatcaaccttaggaataagggcaataaaagt 8811943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 20397035 - 20397177
Alignment:
Q  75 atccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaacagcaataaatccctttttaatctggacgtctca 174  Q
    ||||||||| | ||||||||| ||||| ||||| ||||| || || ||||| |||||||||||||||| ||| | |||  | || ||| |    | ||||    
T  20397035 atccataacagaatccaaataaccccaatcaacagaatcctaggccttttcaaaatccaccttaaacaacaaaagatctttcttcaatttcctagcctca 20397134  T
Q  175 tcgaccacctcatttgctataagaatcccatctaaaatttgtc 217  Q
    || || ||||||||||||||||||||  |||| ||||||||||    
T  20397135 tccacaacctcatttgctataagaatatcatcaaaaatttgtc 20397177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 26695401 - 26695463
Alignment:
Q  78 cataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaa 140  Q
    |||||| | ||||||||| ||||||||||| |||||||| |||||||| |||||||| |||||    
T  26695401 cataaccgaatccaaatagccccagtcaacagaatcatatgctttttcaaaatccactttaaa 26695463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 8936509 - 8936609
Alignment:
Q  40 atccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaa 139  Q
    |||||||| ||||||||||| ||||| |||||| |   || ||| | ||||||||||||||| ||||| || ||||| || ||||| |||||||| ||||    
T  8936509 atccattttctccaaagaacagggaaagacatcttggacaaaacagaatccaaatacccccaatcaaccgagtcatatgccttttcaaaatccactttaa 8936608  T
Q  140 a 140  Q
    |    
T  8936609 a 8936609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 19649145 - 19649232
Alignment:
Q  55 agaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||| ||||| |||||| || ||| ||| | ||||||||||||||| ||||  || |||||||| ||||| |||||||| |||||||    
T  19649145 agaactgggaaagacatcttagccaaaacagaatccaaatacccccaatcaatcgagtcatacgccttttcaaaatccactttaaaca 19649232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 3128676 - 3128594
Alignment:
Q  64 aacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaacagcaa 146  Q
    ||||||||||  ||||||||  |||||||||| ||||| || || |||||| |||| ||||| ||||  ||||||||||||||    
T  3128676 aacgacatccgttccataacaacatccaaataaccccaatccacagaatcaaacgccttttcaaaattaaccttaaacagcaa 3128594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 401
Target Start/End: Complemental strand, 10561767 - 10561669
Alignment:
Q  303 tttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaatacc 401  Q
    |||||| | ||| |||||||  ||||| || || ||||||||||  | || |||||||||||| |||||||| || ||||| ||||| |||||||||||    
T  10561767 tttatacaaacttcccaccaaagaaatagggcgaaaatcattcaggcgctgagggctgtcaaccttaggaatgagggcaatgaaagtagagttaatacc 10561669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 14538963 - 14539020
Alignment:
Q  86 catccaaatacccccagtcaactgaatcatacgc-tttttcgaaatccaccttaaaca 142  Q
    |||||||||| |||||||| ||||||||||| || |||||||||||| || |||||||    
T  14538963 catccaaatatccccagtcgactgaatcatatgcttttttcgaaatcgactttaaaca 14539020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 40689547 - 40689604
Alignment:
Q  85 gcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||| ||||| ||||| ||||| ||||| |||||||| || ||||||||||||||||    
T  40689547 gcatctaaataaccccaatcaacagaatcgtacgctttctcaaaatccaccttaaaca 40689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 10562032 - 10561928
Alignment:
Q  38 taatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccacctt 137  Q
    |||||||||| ||||| | ||| || || ||||| | | ||| ||| | ||||||||| ||||| || || || ||||| || |||||||||||||||||    
T  10562032 taatccattttctccacaaaaccggaaaagacatacgacccaaaacagaatccaaataaccccaatcgacagagtcataggccttttcgaaatccacctt 10561933  T
Q  138 aaaca 142  Q
    |||||    
T  10561932 aaaca 10561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 33171369 - 33171439
Alignment:
Q  316 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaa 386  Q
    ||||||| ||||||||| || |||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  33171369 cccaccaacgaaatgggtcgaaaatcattcaatgtctgaggactgtcaactttaggaataagagcaataaa 33171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 30508740 - 30508626
Alignment:
Q  28 acacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcga 127  Q
    ||||||||  |||||||||||||||| |  || || |||||||| || |||||||| | |||||| ||  |||| ||||| || || |||||||||||||    
T  30508740 acacattctctaatccatttcctccataagacaggaaacgacattctttccataaccgaatccaagtaatcccactcaacagagtcgtacgctttttcga 30508641  T
Q  128 aatccaccttaaaca 142  Q
    |||||||||||||||    
T  30508640 aatccaccttaaaca 30508626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 30549083 - 30548969
Alignment:
Q  28 acacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcga 127  Q
    ||||||||  |||||||||||||||| |  || || |||||||| || |||||||| | |||||| ||  |||| ||||| || || |||||||||||||    
T  30549083 acacattctctaatccatttcctccataagacaggaaacgacattctttccataaccgaatccaagtaatcccactcaacagagtcgtacgctttttcga 30548984  T
Q  128 aatccaccttaaaca 142  Q
    |||||||||||||||    
T  30548983 aatccaccttaaaca 30548969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 12833585 - 12833679
Alignment:
Q  289 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 383  Q
    ||||||||||| |  ||||| | ||||||||||||||||||  | | |||||||| ||| | || |||||||||||| |||||||||||||||||    
T  12833585 accttcgccaatatcttatacaaactacccaccagcgaaatcagtctgaaatcatccaaccgctgagggctgtcaaccttaggaataagagcaat 12833679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 27164545 - 27164457
Alignment:
Q  295 gccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 383  Q
    ||||||| |||||||| |||||||| || |||||| || || |||||||||||   |||||| || || ||||||||||||||||||||    
T  27164545 gccaaaattttataaagactacccaacaacgaaataggtcgaaaatcattcaaggacttaggactctctactttaggaataagagcaat 27164457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 12865563 - 12865657
Alignment:
Q  289 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 383  Q
    ||||||||||| |  ||||| | |||| |||||||||||||  | | |||||||| ||| | || |||||||||||| |||||||||||||||||    
T  12865563 accttcgccaatatcttatacaaactaaccaccagcgaaatcagtctgaaatcatccaaccgctgagggctgtcaaccttaggaataagagcaat 12865657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 36257255 - 36257312
Alignment:
Q  85 gcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||| ||||| ||||| ||||| |||||||||||||| || ||||||||||||||||    
T  36257255 gcatctaaataaccccaatcaacagaatcatacgctttctcaaaatccaccttaaaca 36257312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 381325 - 381424
Alignment:
Q  29 cacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaa 128  Q
    |||||||| | |||||||| | ||| | ||| || |||| |||| | |||||||| ||||||| ||||||||| || ||||||||| | |||||||||||    
T  381325 cacattcctttatccattttccccataaaaccggaaacgccatcttttccataaccgcatccagatacccccaatccactgaatcaaaagctttttcgaa 381424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 25856120 - 25856042
Alignment:
Q  64 aacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||||||| |||||||  | || | ||||||||| |||||||| |||||||| || || |||||||| |||||||    
T  25856120 aacgacatcctaaccataacctcctcaagatacccccaatcaactgagtcatacgccttctcaaaatccactttaaaca 25856042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 32643291 - 32643408
Alignment:
Q  25 gaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgcttttt 124  Q
    |||||||||||| | ||||| |||||||| | |   ||||| ||||| ||  |||||||  |||| ||||| ||||| ||||||||||||||||||||||    
T  32643291 gaaacacattccttcatccacttcctccataaagaagggaaagacattctccccataacatcatctaaataaccccaatcaactgaatcatacgcttttt 32643390  T
Q  125 cgaaatccaccttaaaca 142  Q
    | ||||| ||||||||||    
T  32643391 caaaatcaaccttaaaca 32643408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 5498436 - 5498551
Alignment:
Q  27 aacacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcg 126  Q
    |||||||||  | |||||||||||||||||||| || || ||||| | | ||||||| | ||| ||||| ||| |||| ||  ||||||| || |||||     
T  5498436 aacacattctttgatccatttcctccaaagaacaggaaaagacatgcaacccataacagaatctaaataaccctagtctacaaaatcatatgccttttca 5498535  T
Q  127 aaatccaccttaaaca 142  Q
    || |||||||||||||    
T  5498536 aagtccaccttaaaca 5498551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 36191467 - 36191402
Alignment:
Q  77 ccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||  |||| |||||||| || || ||||||||||| |||||||||||||| ||||| ||||    
T  36191467 ccataacatcatctaaataccctcaatcgactgaatcataagctttttcgaaatcaaccttgaaca 36191402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 206
Target Start/End: Original strand, 43572964 - 43573142
Alignment:
Q  28 acacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcga 127  Q
    ||||||||  |||||||||| ||||| |  || || |||||||| || |||||||| |  | ||||||  |||| ||||| || || ||||||||||| |    
T  43572964 acacattctctaatccattttctccataagacaggaaacgacattctctccataaccgagttcaaataatcccattcaacagagtcgtacgctttttcaa 43573063  T
Q  128 aatccaccttaaacagcaataaatccctttttaatctggacgtctcatcgaccacctcatttgctataagaatcccatc 206  Q
    |||||||||| |||| ||| |  ||| | || |||||||| |  ||||| ||||||||||| ||||||||||| |||||    
T  43573064 aatccaccttgaacaacaaaagttccttattaaatctggatgcttcatccaccacctcattggctataagaataccatc 43573142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 45994009 - 45994113
Alignment:
Q  38 taatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccacctt 137  Q
    |||||||||| | ||| ||||| ||||| |||||| || ||| ||| | ||||||||||||||| ||||  || |||||||| ||||| |||||||| ||    
T  45994009 taatccattttcgccagagaactgggaaagacatcttagccaaaacagaatccaaatacccccaatcaatcgagtcatacgccttttcaaaatccacttt 45994108  T
Q  138 aaaca 142  Q
    |||||    
T  45994109 aaaca 45994113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 13441493 - 13441595
Alignment:
Q  40 atccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaa 139  Q
    |||||||| ||||||||||| || || ||||| |   ||||||| | ||| ||||| |||||||| || |||||||| || ||||| |||||||||||||    
T  13441493 atccattttctccaaagaacaggaaaagacatgcaccccataacagaatctaaataaccccagtccaccgaatcataagccttttcaaaatccaccttaa 13441592  T
Q  140 aca 142  Q
    |||    
T  13441593 aca 13441595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 17722107 - 17722172
Alignment:
Q  77 ccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||| |||| | ||||||||| ||||| ||||||||||| ||||| |||||||| |||||||    
T  17722107 ccataacttcatcaagatacccccaatcaacagaatcatacgccttttcaaaatccactttaaaca 17722172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 34233134 - 34233238
Alignment:
Q  38 taatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccacctt 137  Q
    ||||||| |||||||| ||||| ||||| ||||| |   ||| ||| | ||||||||| |||||||| || || ||||| |||||||| |||||||||||    
T  34233134 taatccacttcctccacagaaccgggaaagacatacgccccagaacagaatccaaataaccccagtcgacagagtcataggctttttcaaaatccacctt 34233233  T
Q  138 aaaca 142  Q
     ||||    
T  34233234 gaaca 34233238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 38429779 - 38429740
Alignment:
Q  106 actgaatcatacgctttttcgaaatccaccttaaacagca 145  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  38429779 actgaatcatacgccttttcgaaatccaccttaaaaagca 38429740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 12377361 - 12377321
Alignment:
Q  361 tcaactttaggaataagagcaataaaagttgagttaatacc 401  Q
    ||||||||||| ||||||||||||||||| || ||||||||    
T  12377361 tcaactttaggtataagagcaataaaagtggaattaatacc 12377321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 3239 - 3161
Alignment:
Q  64 aacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||||||||  |||||||| || |||||||| ||||| || || ||||||||||| ||||| ||||| ||||||||||    
T  3239 aacgacatccgttccataacagcgtccaaatagccccaatctacagaatcatacgccttttcaaaatcaaccttaaaca 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 14383 - 14269
Alignment:
Q  28 acacattccataatccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcga 127  Q
    ||||||||  |||||||||||||||| ||||| || || ||||| |  |||||||  | |||||| || || || ||||| |||||||| |||||||| |    
T  14383 acacattctctaatccatttcctccacagaacaggaaaagacattccctccataaacggatccaagtagccgcaatcaacggaatcataagctttttcaa 14284  T
Q  128 aatccaccttaaaca 142  Q
    ||||||| |||||||    
T  14283 aatccactttaaaca 14269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 13939428 - 13939498
Alignment:
Q  316 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaa 386  Q
    ||||||| ||||| ||| || |||||||||||| ||| |||  |||| |||||||||||||||||||||||    
T  13939428 cccaccaacgaaaagggtcgaaaatcattcaatgtctgaggattgtctactttaggaataagagcaataaa 13939498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 17576398 - 17576320
Alignment:
Q  64 aacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    |||||||||||| |||||||  | || | |||||||||||||||||| |||||||| || || |||||||| |||||||    
T  17576398 aacgacatcctaaccataacctcctcaagatacccccagtcaactgagtcatacgccttctcaaaatccactttaaaca 17576320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 34601730 - 34601842
Alignment:
Q  274 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 373  Q
    |||||| ||||||  ||||| ||||||| |||||| |  || |||||||  |||||||| |||||||||||||| |  | ||| |||||||| || ||||    
T  34601730 agtctattagctaacaccttagccaaaattttatacaagcttcccaccaaagaaatggggcggaaatcattcaaacgttgaggactgtcaaccttcggaa 34601829  T
Q  374 taagagcaataaa 386  Q
    | |||||||||||    
T  34601830 tgagagcaataaa 34601842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 34628272 - 34628384
Alignment:
Q  274 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 373  Q
    |||||| ||||||  ||||| ||||||| |||||| |  || |||||||  |||||||| |||||||||||||| |  | ||| |||||||| || ||||    
T  34628272 agtctattagctaacaccttagccaaaattttatacaagcttcccaccaaagaaatggggcggaaatcattcaaacgttgaggactgtcaaccttcggaa 34628371  T
Q  374 taagagcaataaa 386  Q
    | |||||||||||    
T  34628372 tgagagcaataaa 34628384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 34723006 - 34723118
Alignment:
Q  274 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 373  Q
    |||||| ||||||  ||||| ||||||| |||||| |  || |||||||  |||||||| |||||||||||||| |  | ||| |||||||| || ||||    
T  34723006 agtctattagctaacaccttagccaaaattttatacaagcttcccaccaaagaaatggggcggaaatcattcaaacgttgaggactgtcaaccttcggaa 34723105  T
Q  374 taagagcaataaa 386  Q
    | |||||||||||    
T  34723106 tgagagcaataaa 34723118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 26206767 - 26206869
Alignment:
Q  40 atccatttcctccaaagaacggggaacgacatcctatccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaa 139  Q
    ||||||||||||||||||||  | || ||||| | | ||||||| | ||| ||||| |||||||| || |||||||  || ||||| || ||||||||||    
T  26206767 atccatttcctccaaagaacacgaaaagacatgcaacccataacagaatctaaataaccccagtccacagaatcatgtgccttttcaaagtccaccttaa 26206866  T
Q  140 aca 142  Q
    |||    
T  26206867 aca 26206869  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 5390146 - 5390101
Alignment:
Q  97 ccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||||    
T  5390146 ccccaatcaacagaatcataagctttttcaaaatccaccttaaaca 5390101  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 11059530 - 11059465
Alignment:
Q  77 ccataactgcatccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaaca 142  Q
    ||||||| | ||||||||| ||||| || || |||||||| || ||||| ||||||||||||||||    
T  11059530 ccataacagaatccaaataaccccaatcgacagaatcataggccttttcaaaatccaccttaaaca 11059465  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 12150133 - 12150081
Alignment:
Q  91 aaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaacag 143  Q
    ||||||| |||||||||| |||| || |||||||| ||||| |||||||||||    
T  12150133 aaatacctccagtcaacttaatcgtatgctttttcaaaatcaaccttaaacag 12150081  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 20587117 - 20587077
Alignment:
Q  276 tctactagctagaaccttcgccaaaactttataaacactac 316  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  20587117 tctattagctaaaaccttcgccaaaattttataaacactac 20587077  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 29184 - 29250
Alignment:
Q  15 tgttgcagacgaaacacattccataatccatttcctccaaagaacggggaacgacatcctatccata 81  Q
    |||||||| ||| ||||| ||  || |||| |||||||| |||||||||||||||||||| ||||||    
T  29184 tgttgcagtcgatacacactctgtattccacttcctccagagaacggggaacgacatcctttccata 29250  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 183597 - 183651
Alignment:
Q  87 atccaaatacccccagtcaactgaatcatacgctttttcgaaatccaccttaaac 141  Q
    ||||||||| ||||||||||| || ||||| || ||||| |||||||||||||||    
T  183597 atccaaataaccccagtcaacagactcataggccttttcaaaatccaccttaaac 183651  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 183681 - 183727
Alignment:
Q  171 ctcatcgaccacctcatttgctataagaatcccatctaaaatttgtc 217  Q
    |||||| || |||||||||||||||||||||||||| | ||||||||    
T  183681 ctcatccacaacctcatttgctataagaatcccatcaagaatttgtc 183727  T

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