View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1317_low_81 (Length: 203)
Name: NF1317_low_81
Description: NF1317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1317_low_81 |
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Alignment Details
Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 46040296 - 46040427
Alignment:
| Q |
1 |
gtttcccagaaagcacaagactattagcagtgaccctaacttaatataataatatcatatagccaccgacgcgctttatgttccaaacctttcaaaaggc |
100 |
Q |
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| T |
46040296 |
gtttcccagaaagcacaagactactagcagtgaccctaacttaatataataatatcatatagccaccgacgcgctttatgttccaaacctttcaaaaggc |
46040395 |
T |
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| Q |
101 |
acatcccattcatcacattcataccaaaataa |
132 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
46040396 |
acatcccattcatcacattcataccaaaataa |
46040427 |
T |
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