View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13180_high_11 (Length: 295)
Name: NF13180_high_11
Description: NF13180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13180_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 37813694 - 37813970
Alignment:
| Q |
1 |
aagtgccaatgaaaattgagttgccaactcctccaatgctttgtgcaaaaattgctgccaagcatcccaatccacctcctacaatggtacctattccacg |
100 |
Q |
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| T |
37813694 |
aagtgccaatgaaaattgagttgccaactcctccaatgctttgtgcaaaaattgctgccaagcatcccaatccacctcctacaatggtacctattccacg |
37813793 |
T |
|
| Q |
101 |
attcaagccttttcctagtgtagctcctaacatgttgatcaaagtgattaattaacacattcatcattgcctaagaggcattgctatatataagaattga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37813794 |
attcaagccttttcctagtgtagctcctaacatgttgatcaaagtgattaattaacacattcatcattgcctaagaggcattgctatatataagaattga |
37813893 |
T |
|
| Q |
201 |
taactgaaatatatatgctagctaatgaaagtatatacctgcattgaattcagagatgacaacaacagtcatgatag |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37813894 |
taactgaaatatatatgctagctaatgaaagtatatacctgcattgaattcagagatgacaacaacagtcatgatag |
37813970 |
T |
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