View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13180_low_30 (Length: 219)
Name: NF13180_low_30
Description: NF13180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13180_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 6035617 - 6035440
Alignment:
| Q |
23 |
gtacccaaaacctaactaatatttctgttttgttttaagggatcatcacatgcccaacttaattgttttgcatgaaaatggaaaacatagaattcatggg |
122 |
Q |
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| T |
6035617 |
gtacccaaaacctaactactatttctgttttgttttaagggatcatcacatgcccaacttaattgttttgcatgaaaatggaaaacatagaattcatggg |
6035518 |
T |
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| Q |
123 |
agaaagatgtttggttgcatgctccacaagaaaatgcacttcctgtaaaattannnnnnnnccctattttatttgttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| |
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| T |
6035517 |
agaaagatgtttggttgcatgctccacaagaaaatgtacttcctgtcaaattattttttttccctattttatttgttc |
6035440 |
T |
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