View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13181_high_2 (Length: 690)

Name: NF13181_high_2
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13181_high_2
NF13181_high_2
[»] chr4 (47 HSPs)
chr4 (155-686)||(3345782-3346312)
chr4 (133-192)||(27871379-27871439)
chr4 (132-183)||(36203235-36203287)
chr4 (128-183)||(25978313-25978368)
chr4 (128-178)||(42756121-42756172)
chr4 (138-191)||(56551594-56551648)
chr4 (155-196)||(836232-836273)
chr4 (134-178)||(12439665-12439710)
chr4 (132-191)||(7230279-7230339)
chr4 (156-196)||(11085762-11085802)
chr4 (155-195)||(13276152-13276192)
chr4 (154-194)||(17423176-17423216)
chr4 (155-195)||(25783447-25783487)
chr4 (132-191)||(33413332-33413392)
chr4 (155-194)||(30847981-30848020)
chr4 (134-179)||(11144679-11144725)
chr4 (155-193)||(23160063-23160101)
chr4 (154-196)||(41520976-41521018)
chr4 (128-181)||(46676510-46676564)
chr4 (154-191)||(11286783-11286820)
chr4 (155-196)||(11949760-11949801)
chr4 (155-196)||(19908715-19908756)
chr4 (155-196)||(22630357-22630398)
chr4 (155-196)||(42845048-42845089)
chr4 (140-196)||(46434757-46434814)
chr4 (154-191)||(49041983-49042020)
chr4 (155-192)||(49953404-49953441)
chr4 (155-191)||(675941-675977)
chr4 (155-191)||(16304100-16304136)
chr4 (128-179)||(18635525-18635577)
chr4 (156-196)||(19479474-19479514)
chr4 (155-191)||(20383511-20383547)
chr4 (155-191)||(20799396-20799432)
chr4 (132-179)||(21317352-21317400)
chr4 (153-181)||(26008061-26008089)
chr4 (155-191)||(31138995-31139031)
chr4 (140-180)||(34545942-34545982)
chr4 (155-191)||(37921769-37921805)
chr4 (156-196)||(37930844-37930884)
chr4 (156-196)||(40070965-40071005)
chr4 (155-191)||(43034344-43034380)
chr4 (128-179)||(43183007-43183059)
chr4 (136-179)||(43782319-43782363)
chr4 (128-179)||(49308815-49308867)
chr4 (132-191)||(54500568-54500628)
chr4 (155-195)||(54677248-54677288)
chr4 (128-179)||(56497622-56497674)
[»] chr2 (52 HSPs)
chr2 (18-178)||(39770541-39770702)
chr2 (132-183)||(21558816-21558868)
chr2 (132-190)||(22571868-22571927)
chr2 (132-180)||(1861822-1861871)
chr2 (126-190)||(10332278-10332343)
chr2 (128-196)||(42181300-42181369)
chr2 (132-183)||(7206124-7206176)
chr2 (128-179)||(19179064-19179116)
chr2 (128-179)||(24393240-24393292)
chr2 (132-195)||(26999109-26999173)
chr2 (128-179)||(39761433-39761485)
chr2 (127-181)||(12124678-12124733)
chr2 (128-178)||(18231488-18231539)
chr2 (131-181)||(24593374-24593425)
chr2 (138-196)||(32458307-32458366)
chr2 (128-181)||(12124540-12124594)
chr2 (158-196)||(13100261-13100299)
chr2 (139-196)||(29734697-29734755)
chr2 (132-181)||(33063985-33064035)
chr2 (132-181)||(39068720-39068770)
chr2 (132-177)||(44694687-44694733)
chr2 (155-196)||(4138014-4138055)
chr2 (127-171)||(9459079-9459124)
chr2 (128-176)||(10065468-10065517)
chr2 (139-191)||(25186244-25186297)
chr2 (132-180)||(25598575-25598624)
chr2 (155-196)||(31815884-31815925)
chr2 (139-191)||(43117192-43117245)
chr2 (132-179)||(4122027-4122075)
chr2 (140-179)||(5980234-5980274)
chr2 (132-179)||(7302155-7302203)
chr2 (155-191)||(8091160-8091196)
chr2 (130-197)||(10076871-10076939)
chr2 (155-191)||(12413516-12413552)
chr2 (155-191)||(12425576-12425612)
chr2 (128-179)||(16204831-16204883)
chr2 (155-191)||(20565077-20565113)
chr2 (132-191)||(22608526-22608586)
chr2 (156-196)||(24581014-24581054)
chr2 (132-179)||(24592860-24592908)
chr2 (132-179)||(27244656-27244704)
chr2 (132-191)||(28202296-28202356)
chr2 (155-191)||(29544650-29544686)
chr2 (132-191)||(30089048-30089108)
chr2 (132-191)||(30125652-30125712)
chr2 (132-191)||(30243249-30243309)
chr2 (155-191)||(35726411-35726447)
chr2 (155-191)||(36359337-36359373)
chr2 (128-179)||(40099397-40099449)
chr2 (132-191)||(40967373-40967433)
chr2 (155-183)||(41778954-41778982)
chr2 (155-191)||(42791318-42791354)
[»] chr6 (36 HSPs)
chr6 (127-196)||(15187057-15187127)
chr6 (127-196)||(15473479-15473549)
chr6 (135-197)||(28758286-28758349)
chr6 (128-191)||(3808120-3808184)
chr6 (132-191)||(33824880-33824940)
chr6 (131-181)||(4450260-4450311)
chr6 (132-181)||(18256882-18256932)
chr6 (155-191)||(8637439-8637475)
chr6 (155-191)||(31971552-31971588)
chr6 (132-195)||(34701146-34701210)
chr6 (128-178)||(3487926-3487977)
chr6 (155-190)||(16130788-16130823)
chr6 (138-179)||(334145-334187)
chr6 (154-196)||(8130456-8130498)
chr6 (132-178)||(12735157-12735203)
chr6 (138-179)||(15155740-15155782)
chr6 (154-183)||(1918468-1918497)
chr6 (154-195)||(4826312-4826353)
chr6 (131-175)||(5679436-5679481)
chr6 (154-195)||(14049882-14049923)
chr6 (127-182)||(2213291-2213347)
chr6 (155-191)||(2692238-2692274)
chr6 (155-191)||(3358414-3358450)
chr6 (132-179)||(7081668-7081716)
chr6 (132-179)||(8138472-8138520)
chr6 (155-191)||(8569732-8569768)
chr6 (156-196)||(8809330-8809370)
chr6 (156-192)||(17113461-17113497)
chr6 (130-197)||(17829304-17829372)
chr6 (153-193)||(19265524-19265564)
chr6 (132-196)||(23903304-23903368)
chr6 (155-195)||(26356079-26356119)
chr6 (131-178)||(28046193-28046241)
chr6 (155-195)||(28231423-28231463)
chr6 (155-195)||(32053811-32053851)
chr6 (139-190)||(32193862-32193914)
[»] chr7 (32 HSPs)
chr7 (128-193)||(39280818-39280884)
chr7 (132-179)||(5458085-5458133)
chr7 (132-179)||(7872762-7872810)
chr7 (133-183)||(8615023-8615074)
chr7 (152-191)||(20085761-20085800)
chr7 (128-178)||(38553813-38553864)
chr7 (139-189)||(41250051-41250102)
chr7 (131-181)||(48527188-48527239)
chr7 (128-181)||(2618674-2618728)
chr7 (132-178)||(4047785-4047831)
chr7 (138-191)||(18714453-18714507)
chr7 (155-193)||(35224141-35224179)
chr7 (132-181)||(42336069-42336119)
chr7 (155-196)||(3584227-3584268)
chr7 (155-196)||(18023702-18023743)
chr7 (155-196)||(19599168-19599209)
chr7 (154-191)||(28736635-28736672)
chr7 (155-184)||(41527583-41527612)
chr7 (155-196)||(42227802-42227843)
chr7 (155-196)||(44651628-44651669)
chr7 (155-196)||(44868152-44868193)
chr7 (133-181)||(46987086-46987135)
chr7 (155-196)||(47342431-47342472)
chr7 (155-191)||(10244750-10244786)
chr7 (155-191)||(19626527-19626563)
chr7 (155-191)||(27462438-27462474)
chr7 (132-196)||(36755014-36755078)
chr7 (132-196)||(36760811-36760875)
chr7 (132-175)||(39926556-39926600)
chr7 (130-181)||(41029269-41029321)
chr7 (155-195)||(42829232-42829272)
chr7 (155-191)||(46737808-46737844)
[»] chr8 (34 HSPs)
chr8 (127-191)||(42208471-42208536)
chr8 (128-182)||(44019544-44019599)
chr8 (133-196)||(24195249-24195313)
chr8 (133-190)||(4263815-4263873)
chr8 (128-181)||(19778060-19778114)
chr8 (138-191)||(5880986-5881039)
chr8 (132-196)||(27718891-27718956)
chr8 (155-195)||(7553702-7553742)
chr8 (138-185)||(11771712-11771760)
chr8 (132-182)||(6314334-6314385)
chr8 (138-181)||(24791457-24791500)
chr8 (130-180)||(31888023-31888074)
chr8 (126-179)||(17704006-17704060)
chr8 (139-180)||(29652224-29652266)
chr8 (128-181)||(42367724-42367778)
chr8 (154-196)||(43778041-43778083)
chr8 (133-181)||(574384-574433)
chr8 (131-179)||(1244719-1244768)
chr8 (126-182)||(5728531-5728588)
chr8 (155-196)||(11709009-11709050)
chr8 (155-192)||(33743598-33743635)
chr8 (132-179)||(1877676-1877724)
chr8 (132-195)||(6038273-6038337)
chr8 (155-191)||(12748924-12748960)
chr8 (155-191)||(13357443-13357479)
chr8 (155-191)||(24696008-24696044)
chr8 (132-191)||(27587220-27587280)
chr8 (126-193)||(28084275-28084343)
chr8 (128-179)||(30623288-30623340)
chr8 (155-191)||(32051534-32051570)
chr8 (128-183)||(32878656-32878712)
chr8 (132-191)||(33105390-33105450)
chr8 (155-195)||(37141380-37141420)
chr8 (154-194)||(42700527-42700567)
[»] chr1 (40 HSPs)
chr1 (126-181)||(10843333-10843389)
chr1 (128-179)||(16307645-16307696)
chr1 (128-181)||(38448878-38448932)
chr1 (132-196)||(8269365-8269430)
chr1 (123-179)||(10132458-10132515)
chr1 (132-180)||(30795700-30795749)
chr1 (155-191)||(6000145-6000181)
chr1 (155-195)||(16967192-16967232)
chr1 (128-183)||(47528457-47528513)
chr1 (130-180)||(17283948-17283999)
chr1 (128-190)||(19620571-19620634)
chr1 (132-181)||(3509953-3510003)
chr1 (153-191)||(10654449-10654487)
chr1 (134-175)||(13779579-13779621)
chr1 (155-197)||(22335381-22335423)
chr1 (132-177)||(24324416-24324462)
chr1 (125-170)||(26763566-26763612)
chr1 (155-197)||(33153876-33153918)
chr1 (132-181)||(52441523-52441573)
chr1 (132-196)||(3693793-3693858)
chr1 (128-180)||(5907794-5907847)
chr1 (158-195)||(16966970-16967007)
chr1 (131-179)||(22946564-22946613)
chr1 (128-180)||(45140019-45140072)
chr1 (154-183)||(47961299-47961328)
chr1 (158-191)||(49868037-49868070)
chr1 (132-195)||(563200-563264)
chr1 (156-196)||(2596937-2596977)
chr1 (128-175)||(6809817-6809865)
chr1 (156-196)||(12268981-12269021)
chr1 (132-179)||(13794522-13794570)
chr1 (155-195)||(16033448-16033488)
chr1 (155-191)||(25532996-25533032)
chr1 (132-191)||(26755615-26755675)
chr1 (132-191)||(26803453-26803513)
chr1 (123-178)||(32030920-32030976)
chr1 (155-191)||(33020045-33020081)
chr1 (155-191)||(34521192-34521228)
chr1 (155-195)||(45481516-45481556)
chr1 (133-196)||(46334775-46334839)
[»] chr3 (29 HSPs)
chr3 (128-178)||(5702193-5702243)
chr3 (132-179)||(4216413-4216461)
chr3 (128-179)||(45096021-45096073)
chr3 (130-189)||(12746361-12746421)
chr3 (156-196)||(24348411-24348451)
chr3 (127-178)||(47099050-47099102)
chr3 (155-195)||(47536478-47536518)
chr3 (128-191)||(55126001-55126065)
chr3 (131-178)||(48688113-48688160)
chr3 (122-175)||(35492782-35492836)
chr3 (133-191)||(48849765-48849823)
chr3 (123-179)||(1149083-1149140)
chr3 (154-191)||(8075807-8075844)
chr3 (132-196)||(26768400-26768465)
chr3 (156-193)||(28430565-28430602)
chr3 (155-196)||(34899120-34899161)
chr3 (134-198)||(41834526-41834590)
chr3 (154-191)||(48656901-48656938)
chr3 (155-191)||(5349551-5349587)
chr3 (154-194)||(7626460-7626500)
chr3 (155-195)||(8238587-8238627)
chr3 (133-180)||(13800667-13800715)
chr3 (156-196)||(22722426-22722466)
chr3 (155-191)||(24428475-24428511)
chr3 (155-191)||(38130961-38130997)
chr3 (154-190)||(40575612-40575648)
chr3 (155-191)||(41817522-41817558)
chr3 (155-191)||(45431971-45432007)
chr3 (128-179)||(53207965-53208017)
[»] chr5 (26 HSPs)
chr5 (128-179)||(17144474-17144526)
chr5 (128-175)||(1669598-1669646)
chr5 (128-195)||(26376961-26377029)
chr5 (132-178)||(11844453-11844500)
chr5 (132-194)||(22394034-22394097)
chr5 (143-182)||(39938769-39938808)
chr5 (138-196)||(776686-776744)
chr5 (132-181)||(8545001-8545051)
chr5 (154-196)||(35493970-35494012)
chr5 (155-185)||(41650947-41650977)
chr5 (130-178)||(2951382-2951431)
chr5 (126-178)||(11647190-11647243)
chr5 (132-192)||(37614428-37614489)
chr5 (156-196)||(1538805-1538845)
chr5 (132-191)||(6226306-6226366)
chr5 (128-191)||(8882401-8882465)
chr5 (132-179)||(16133079-16133127)
chr5 (132-191)||(16579376-16579436)
chr5 (155-191)||(18557877-18557913)
chr5 (124-196)||(20125018-20125089)
chr5 (155-191)||(22522803-22522839)
chr5 (156-196)||(27903137-27903177)
chr5 (156-196)||(31602822-31602862)
chr5 (155-195)||(32806382-32806422)
chr5 (143-190)||(40445993-40446041)
chr5 (155-191)||(40715951-40715987)
[»] scaffold0238 (1 HSPs)
scaffold0238 (126-180)||(25382-25437)
[»] scaffold0083 (1 HSPs)
scaffold0083 (128-197)||(45938-46008)
[»] scaffold1619 (1 HSPs)
scaffold1619 (154-191)||(1053-1090)
[»] scaffold0028 (1 HSPs)
scaffold0028 (155-196)||(72772-72813)
[»] scaffold0016 (1 HSPs)
scaffold0016 (155-196)||(99060-99101)
[»] scaffold0350 (1 HSPs)
scaffold0350 (132-195)||(1247-1311)
[»] scaffold0334 (1 HSPs)
scaffold0334 (155-191)||(5205-5241)
[»] scaffold0118 (1 HSPs)
scaffold0118 (156-196)||(40335-40375)
[»] scaffold0038 (1 HSPs)
scaffold0038 (155-195)||(31920-31960)


Alignment Details
Target: chr4 (Bit Score: 371; Significance: 0; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 155 - 686
Target Start/End: Complemental strand, 3346312 - 3345782
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccgaaagnnnnnnnn--gtatagtaattttacgtatataaaagattcaattagannnnnnnn 252  Q
    |||||||||||||||||||||||||||||| ||||||||||||||          || ||| ||||||||||||||||||||||||||||||            
T  3346312 gacaatgcataatatatgcaaggtccgagtgtcaaactccgaaagaaaaaaaaaagtctagaaattttacgtatataaaagattcaattagatttttttt 3346213  T
Q  253 -aaggatagattcnnnnnnnnaatcgtcaaaaagaactctaatttaagtaaatacattcttaaaatacatatttgaacatagtaacccatttatgtttta 351  Q
     |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3346212 taaggatagatt--tttttttaatcgtcaaaaagaactctaatttaagtaaatacattcttaaaatacatatttgaacatagtaacccatttatgtttta 3346115  T
Q  352 tagatttcattcttgttttggcaaaaatttctttatc-aagtgagatgtcgataagatcaatgctggctgcagctataacaaggtccatttgttggtggc 450  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||| ||    
T  3346114 tagatttcattcttgttttggcaaaaatttctttgtttaagtgagatgtcgataagatcaatgctggctggagctataacaaggtccaatggttggtagc 3346015  T
Q  451 acttatttcatggtgaaaagccatttcatttgtttgtttgcatatatatatgtttggggtgttactttcatccgagtcacttttaaagcattttgtagtg 550  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3346014 acttatttcatggtgaaaagccatttcatttgtttgtttgcatatatatatgtttggggtgttactttcatccgagtcacttttaaagcattttgtagtg 3345915  T
Q  551 tccactgctacaaacaactagcacacaaactcattggtagttcacttcatcatttatatctttttcactctcccctcttacctttttctatacttgattt 650  Q
    |||||| |||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3345914 tccactcctacaaacaactagcacacaaactcattggtagttcact---tcatttacatctttttcactctcccctcttacctttttctatacttgattt 3345818  T
Q  651 tggtgaaaaccaaaatatttgcttgttcatcaccaa 686  Q
    ||||||||||||||||||||||||||||||||||||    
T  3345817 tggtgaaaaccaaaatatttgcttgttcatcaccaa 3345782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 27871439 - 27871379
Alignment:
Q  133 gtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaact 192  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||||||||| ||||||||    
T  27871439 gtgaacttagctcatttgatagagacaatgtataatatatgcaaggtccgaggttcaaact 27871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 36203235 - 36203287
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgag 183  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  36203235 cgtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccgag 36203287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 25978313 - 25978368
Alignment:
Q  128 tccccgtgaacttagctcagctgataagacaatgcataatatatgcaaggtccgag 183  Q
    ||||||||| |||||||||| ||  | |||||||||||||||||||||||||||||    
T  25978313 tccccgtgagcttagctcagttgtaaggacaatgcataatatatgcaaggtccgag 25978368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 42756172 - 42756121
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  42756172 tccctgtgaacttagctcagttgataaggacaatgcataatatatgcaaggt 42756121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 56551648 - 56551594
Alignment:
Q  138 cttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||| || |||| |||||||||||||||||||||||||||| |||||||    
T  56551648 cttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaac 56551594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 836273 - 836232
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  836273 gacaatgcaaaatatatgcaaggtccgaggttcaaactccga 836232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 12439665 - 12439710
Alignment:
Q  134 tgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||    
T  12439665 tgaacttagctcagttgataaggacaatgcataatatatgcaaggt 12439710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 7230279 - 7230339
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| || |||| |||||||||||||||||||||||||| | |||||||    
T  7230279 cgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaac 7230339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 11085802 - 11085762
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  11085802 acaatgcataatatatgcaaggttcgagattcaaactccga 11085762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 13276152 - 13276192
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  13276152 gacaatgcataatatatgcaaggtccgtgtttcaaattccg 13276192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 17423216 - 17423176
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactcc 194  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  17423216 agacaatgcataatatatgcaaggtccggggttcaaactcc 17423176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 25783487 - 25783447
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  25783487 gacaatgcataatatatgcaaggtccggggttcaaactccg 25783447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 33413392 - 33413332
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||| ||||||||| ||||||| |||||||||||||||| ||| ||||||| |||||||    
T  33413392 cgtgaatttagctcagttgataaggacaatgcataatatattcaatgtccgagattcaaac 33413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 30848020 - 30847981
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactcc 194  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  30848020 gacaatgcataaaatatgcaaggtccgaggttcaaactcc 30847981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 11144725 - 11144679
Alignment:
Q  134 tgaacttagctcagctgataa-gacaatgcataatatatgcaaggtc 179  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  11144725 tgaacttacctcagttgataaagacaatgcataatatatgcaaggtc 11144679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 23160063 - 23160101
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactc 193  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  23160063 gacaatgcataatatatgtaaggtccgaggttcaaactc 23160101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 41520976 - 41521018
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||| | || ||||||||||||    
T  41520976 agacaatgcataatatatgcaaggttcaaggttcaaactccga 41521018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 46676564 - 46676510
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||| ||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  46676564 tccccatgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 46676510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 11286820 - 11286783
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  11286820 agacaatgcataatatatgcaaggtctgagattcaaac 11286783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 11949801 - 11949760
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||| | ||||||| ||||    
T  11949801 gacaatgcataatatatgcaaggtccggggttcaaaccccga 11949760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 19908715 - 19908756
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||    
T  19908715 gacaatgcataatatatgcaaggtccgaggttcgaaccccga 19908756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 22630398 - 22630357
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||    
T  22630398 gacaatgcataatatatgcaaggtctgaggttcaaaccccga 22630357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 42845048 - 42845089
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||| | || |||||||||    
T  42845048 gacaatgcataatatatgcaaggtccggggttaaaactccga 42845089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 46434814 - 46434757
Alignment:
Q  140 tagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||| ||||||| ||||||||||||||||| |||||  ||| ||||||||||||    
T  46434814 tagctcagttgataaggacaatgcataatatatgtaaggtttgaggttcaaactccga 46434757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 49042020 - 49041983
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||||| | |||||||    
T  49042020 agacaatgcataatatatgcaaggtccggggttcaaac 49041983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 49953441 - 49953404
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaact 192  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  49953441 gacaatgcataatatatgcaaggtccggggttcaaact 49953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 675941 - 675977
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  675941 gacaatgcataatatatgcaaggtccggggttcaaac 675977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 16304136 - 16304100
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  16304136 gacaatgcataatatatgcaaggtccgggattcaaac 16304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 18635525 - 18635577
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||||| |||| ||||| ||||||| |||||||||||||||| |||||||    
T  18635525 tccccgtgagcttaactcagttgataaggacaatgcataatatatacaaggtc 18635577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 19479514 - 19479474
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||||| | ||||||| ||||    
T  19479514 acaatgcataatatatgcaaggtccggggttcaaaccccga 19479474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 20383511 - 20383547
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20383511 gacaatgcataatatatgcaaggtccggggttcaaac 20383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 20799432 - 20799396
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20799432 gacaatgcataatatatgcaaggtccggggttcaaac 20799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 21317400 - 21317352
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||| || || ||||||||||||||||||||||||||    
T  21317400 cgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtc 21317352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 26008089 - 26008061
Alignment:
Q  153 aagacaatgcataatatatgcaaggtccg 181  Q
    |||||||||||||||||||||||||||||    
T  26008089 aagacaatgcataatatatgcaaggtccg 26008061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 31139031 - 31138995
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||| |||||||||||||||| |||||||    
T  31139031 gacaatgcataaaatatgcaaggtccgaggttcaaac 31138995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 34545942 - 34545982
Alignment:
Q  140 tagctcagctgataagacaatgcataatatatgcaaggtcc 180  Q
    |||||||  ||||| ||||||||||||||||||||||||||    
T  34545942 tagctcaattgataggacaatgcataatatatgcaaggtcc 34545982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 37921769 - 37921805
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  37921769 gacaatgcataatatatgcaaggtccgggattcaaac 37921805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 37930884 - 37930844
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  37930884 acaatgcataatatatgcaaggtctgaggttcaaaccccga 37930844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 40071005 - 40070965
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||||||  ||||||| ||||    
T  40071005 acaatgcataatatatgcaaggtccgaagttcaaaccccga 40070965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 43034380 - 43034344
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  43034380 gacaatgcataatatatgcaaggtctgaggttcaaac 43034344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 43183059 - 43183007
Alignment:
Q  128 tccccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtc 179  Q
    ||||||||| | || ||||| |||||| |||||||||||||||||||||||||    
T  43183059 tccccgtgagcatatctcagttgataaagacaatgcataatatatgcaaggtc 43183007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 43782363 - 43782319
Alignment:
Q  136 aacttagctcagctgataa-gacaatgcataatatatgcaaggtc 179  Q
    |||||||||||| || ||| |||||||||||||||||||||||||    
T  43782363 aacttagctcagttggtaatgacaatgcataatatatgcaaggtc 43782319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 49308815 - 49308867
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||| | |||||||||| ||| ||| ||||||||||||||||||||||||    
T  49308815 tccccgtaagcttagctcagttgacaaggacaatgcataatatatgcaaggtc 49308867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 54500568 - 54500628
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| || || ||||||||||||||||||| |||||||| | |||||||    
T  54500568 cgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaac 54500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 54677248 - 54677288
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||| ||||| |||| |||||||||||    
T  54677248 gacaatgcataatatatgtaaggttcgagattcaaactccg 54677288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 56497674 - 56497622
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||||| |||||||||  || |||| ||||||||||||||||||||||||    
T  56497674 tccccgtgagcttagctcaattggtaaggacaatgcataatatatgcaaggtc 56497622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 9e-72; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 39770702 - 39770541
Alignment:
Q  18 atcttgaatattttataatcacttcacttacatcaactatatataagttgaactaattttgtggtgcatttctaaattgtttgcatttgtttcaaagtgt 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39770702 atcttgaaaattttataatcacttcacttacatcaactatatataagttgaactaattttgtggtgcatttctaaattgtttgcatttgtttcaaagtgt 39770603  T
Q  118 tagctatctatccccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggt 178  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| |||||    
T  39770602 tagctatctatccccgtgaacttagctcaactggtaaggacaatgcataatatatgtaaggt 39770541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 21558868 - 21558816
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgag 183  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  21558868 cgtgaacttagctcagctggtaaggacaatgcataatatatgcaaggtccgag 21558816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 22571927 - 22571868
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaa 190  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||||| | ||||||    
T  22571927 cgtgaacttagctcagttgatatagacaatgcataatatatgcaatgtccggggttcaaa 22571868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 1861871 - 1861822
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  1861871 cgtgagcttagctcagctgatatggacaatgcataatatatgcaaggtcc 1861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 10332343 - 10332278
Alignment:
Q  126 tatccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaa 190  Q
    ||||| ||||| |||||||||| ||||||| ||||||||||||||||| |||||| ||| ||||||    
T  10332343 tatcctcgtgagcttagctcagttgataaggacaatgcataatatatggaaggtcggaggttcaaa 10332278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 42181369 - 42181300
Alignment:
Q  128 tccccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||| ||||||  ||||||||| |||||||||| ||||||||||||| |||| ||||||| ||||    
T  42181369 tccccgtgagcttagcgtagctgataaagacaatgcatgatatatgcaaggttcgagattcaaaccccga 42181300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 7206124 - 7206176
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgag 183  Q
    ||||| |||||||||| || || ||||||||||||||||||||||||||||||    
T  7206124 cgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtccgag 7206176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 19179116 - 19179064
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  19179116 tccccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 19179064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 24393240 - 24393292
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  24393240 tccccgtgagcttagctcagttgttaaggacaatgcataatatatgcaaggtc 24393292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 26999109 - 26999173
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||| |||| || || |||||||||||||||||||||||||| | | |||||||||||    
T  26999109 cgtgaacttagttcagttggtagagacaatgcataatatatgcaaggtctgcggttcaaactccg 26999173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 39761433 - 39761485
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||    
T  39761433 tccccgtgagtttagctcagttgataaggacaatgcataatatatgcaaggtc 39761485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 12124678 - 12124733
Alignment:
Q  127 atccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||||||| | |||||||||| || |||| ||||||||||||||||||||||||||    
T  12124678 atccccgtcagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 12124733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 18231539 - 18231488
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    ||||||||| |||||||||| || |||| |||||||||||||||||||||||    
T  18231539 tccccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 18231488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 24593374 - 24593425
Alignment:
Q  131 ccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  24593374 ccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 24593425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 32458307 - 32458366
Alignment:
Q  138 cttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  32458307 cttaactcagttgataagaacaatgcataatatatgcaaggtccagggttcaaactccga 32458366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 12124540 - 12124594
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||||||||  ||||||||| || |||| ||||||||||||||||||||||||||    
T  12124540 tccccgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtccg 12124594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 13100299 - 13100261
Alignment:
Q  158 aatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  13100299 aatgcataatatatccaaggtccgaggttcaaactccga 13100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 29734697 - 29734755
Alignment:
Q  139 ttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||| ||||| | |||||||||||||||||||||||||| | ||||||| ||||    
T  29734697 ttagctcagttgatatggacaatgcataatatatgcaaggtccgtggttcaaaccccga 29734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 33063985 - 33064035
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||||||    
T  33063985 cgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccg 33064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 39068770 - 39068720
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||| ||||    
T  39068770 cgtgagcttagctcagttgataaggacaatgcataatatatgcaagatccg 39068720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 44694687 - 44694733
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaagg 177  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  44694687 cgtgaacttaactcagttgatatagacaatgcataatatatgcaagg 44694733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 4138014 - 4138055
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||    
T  4138014 gacaatgtataatatatgcaaggtccgagattcaaaccccga 4138055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 9459124 - 9459079
Alignment:
Q  127 atccccgtgaacttagctcagctgataa-gacaatgcataatatat 171  Q
    |||||||||| |||||||||| |||||| |||||||||||||||||    
T  9459124 atccccgtgagcttagctcagttgataaagacaatgcataatatat 9459079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 10065468 - 10065517
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaag 176  Q
    ||||||||||||||||| || || |||| |||||||||||||||||||||    
T  10065468 tccccgtgaacttagctaagttggtaaggacaatgcataatatatgcaag 10065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 25186297 - 25186244
Alignment:
Q  139 ttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||| ||||| | |||||||||||||||||||||||||| | |||||||    
T  25186297 ttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaac 25186244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 25598624 - 25598575
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    |||||||||||||||| || || | |||||||||||||||||||||||||    
T  25598624 cgtgaacttagctcagttggtatggacaatgcataatatatgcaaggtcc 25598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 31815925 - 31815884
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||| | ||||||| ||||    
T  31815925 gacaatgcataatatatgcaaggtccggggttcaaaccccga 31815884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 43117245 - 43117192
Alignment:
Q  139 ttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||| || |||| |||||||||||||||||||||||| ||| |||||||    
T  43117245 ttagctcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaaac 43117192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 4122075 - 4122027
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| ||||||||||||| || | ||||||||||||||||||||||||    
T  4122075 cgtgagcttagctcagctggtatggacaatgcataatatatgcaaggtc 4122027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 5980234 - 5980274
Alignment:
Q  140 tagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  5980234 tagctcagttgataaggacaatgcataatatatgcaaggtc 5980274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 7302203 - 7302155
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||||||||||||||| ||||| | ||||||||||| ||||||||||||    
T  7302203 cgtgaacttagctcagttgatagggacaatgcataaaatatgcaaggtc 7302155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 8091196 - 8091160
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  8091196 gacaatgcataatatatgcaaggtccggggttcaaac 8091160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 10076871 - 10076939
Alignment:
Q  130 cccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtccgagtttcaaactccgaa 197  Q
    |||||||||||| || ||||||||| |||||| ||||||||||||| | || ||| ||||||| |||||    
T  10076871 cccgtgaacttaacttagctgataaagacaatacataatatatgcatgatctgaggttcaaaccccgaa 10076939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 12413516 - 12413552
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  12413516 gacaatgcataatatatgcaaggtctgaggttcaaac 12413552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 12425576 - 12425612
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  12425576 gacaatgcataatatatgcaaggtctgaggttcaaac 12425612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 16204883 - 16204831
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||| |||| |||| ||||| ||||||| ||||||||||||||||||||||||    
T  16204883 tccctgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtc 16204831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 20565113 - 20565077
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20565113 gacaatgcataatatatgcaaggtccggggttcaaac 20565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 22608526 - 22608586
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| || || |||||||||||||||||||||||||  ||| |||||||    
T  22608526 cgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttcaaac 22608586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 24581054 - 24581014
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||| |||| ||||||| ||||    
T  24581054 acaatgcataatatatgcaaggttcgaggttcaaaccccga 24581014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 24592908 - 24592860
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||||||||||||||| || || | ||||||||||||||||||||||||    
T  24592908 cgtgaacttagctcagttggtagggacaatgcataatatatgcaaggtc 24592860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 27244656 - 27244704
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||||    
T  27244656 cgtgagcttagctcagttgatagggacaatgcataatatatgcaaggtc 27244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 28202296 - 28202356
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| ||||| | ||||||||||||||||| |||||||||  |||||||    
T  28202296 cgtgagcttagctcagttgatagggacaatgcataatatatgtaaggtccgaagttcaaac 28202356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 29544650 - 29544686
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  29544650 gacaatgcataatatatgcaaggtccggggttcaaac 29544686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 30089048 - 30089108
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||| || || | |||||||||||||||| ||||||||| | |||||||    
T  30089048 cgtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaac 30089108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 30125652 - 30125712
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||| || || | |||||||||||||||| ||||||||| | |||||||    
T  30125652 cgtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaac 30125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 30243249 - 30243309
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||| || || |||||||||||||||||| |||||| || | |||||||    
T  30243249 cgtgaacttagctcagttggtagagacaatgcataatatatacaaggttcggggttcaaac 30243309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 35726447 - 35726411
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  35726447 gacaatacataatatatgcaaggtccgaatttcaaac 35726411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 36359337 - 36359373
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  36359337 gacaatgcataatatatgcaaggtccggggttcaaac 36359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 40099449 - 40099397
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| ||| |||||||||| || |||| ||||||||||||||||||||||||    
T  40099449 tccccatgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 40099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 40967433 - 40967373
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||| ||||| ||||||| |||||||||||||||||||||||  ||| |||||||    
T  40967433 cgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaac 40967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 41778982 - 41778954
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgag 183  Q
    |||||||||||||||||||||||||||||    
T  41778982 gacaatgcataatatatgcaaggtccgag 41778954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 42791318 - 42791354
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  42791318 gacaatgcataatatatgcaaggtccggggttcaaac 42791354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 15187057 - 15187127
Alignment:
Q  127 atccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  15187057 atccctgtgagcttagctcagctgataagtacaatgcataatatatgcaaggtccgaggttcaaaccccga 15187127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 15473549 - 15473479
Alignment:
Q  127 atccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  15473549 atccctgtgagcttagctcagctgataagtacaatgcataatatatgcaaggtccgaggttcaaaccccga 15473479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 28758349 - 28758286
Alignment:
Q  135 gaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaactccgaa 197  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  28758349 gaacttagctcagctggtaagaacaatgcataatatatgcaaagtccgaggttcaaaccccgaa 28758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 3808184 - 3808120
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||| ||||| |  |||| |||||||||||||||||||||||||||| |||||||    
T  3808184 tccccgtgaacttaactcagttagtaaggacaatgcataatatatgcaaggtccgagattcaaac 3808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 33824880 - 33824940
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||||| | |||||||    
T  33824880 cgtgatcttagctcagttgataaggacaatgcataatatatgcaaggtccggggttcaaac 33824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 4450260 - 4450311
Alignment:
Q  131 ccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtccg 181  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  4450260 ccgtgagcttagctcagttgataaagacaatgcataatatatgcaaggtccg 4450311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 18256882 - 18256932
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  18256882 cgtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccg 18256932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 8637475 - 8637439
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||||| |||||||    
T  8637475 gacaatgcataatatatgcaaggtccgaggttcaaac 8637439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 31971552 - 31971588
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||||| |||||||    
T  31971552 gacaatgcataatatatgcaaggtccgaggttcaaac 31971588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 34701146 - 34701210
Alignment:
Q  132 cgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||| |||| || || || ||||||||||||||||||||||| ||| |||||||||||    
T  34701146 cgtgaacttagttcagttggtaggaacaatgcataatatatgcaaggtctgaggttcaaactccg 34701210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 3487926 - 3487977
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    ||||||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  3487926 tccccgtgaacttagttcagttgataagaataatgcataatatatgcaaggt 3487977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 16130788 - 16130823
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaa 190  Q
    |||||||||||| |||||||||||||||||||||||    
T  16130788 gacaatgcataaaatatgcaaggtccgagtttcaaa 16130823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 334145 - 334187
Alignment:
Q  138 cttagctcagctgataa-gacaatgcataatatatgcaaggtc 179  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  334145 cttagctcagttgataaagacaatgcataatatatgcaaggtc 334187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 8130498 - 8130456
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||    
T  8130498 agacaatgcataaaatatgcaaggtccgagattcaaaccccga 8130456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 12735203 - 12735157
Alignment:
Q  132 cgtgaacttagctcagctgataagacaatgcataatatatgcaaggt 178  Q
    ||||||| |||||||| || || ||||||||||||||||||||||||    
T  12735203 cgtgaacgtagctcagttggtaggacaatgcataatatatgcaaggt 12735157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 15155740 - 15155782
Alignment:
Q  138 cttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  15155740 cttagctcagctggtaagtacaatgcataatatatgcaaggtc 15155782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 1918497 - 1918468
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgag 183  Q
    ||||||||||||||||||||||||||||||    
T  1918497 agacaatgcataatatatgcaaggtccgag 1918468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 4826312 - 4826353
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||| ||||| |||| |||||||||||    
T  4826312 agacaatgcataatatatgtaaggttcgaggttcaaactccg 4826353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 5679436 - 5679481
Alignment:
Q  131 ccgtgaacttagctcagctgataa-gacaatgcataatatatgcaa 175  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  5679436 ccgtgaacttagctcagctagtaaagacaatgcataatatatgcaa 5679481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 14049923 - 14049882
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||||||| ||| |||||| ||||    
T  14049923 agacaatgcataatatatgcaaggtctgaggttcaaattccg 14049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 2213291 - 2213347
Alignment:
Q  127 atccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccga 182  Q
    |||| |||||||||| ||||  || ||||| ||||||||||||||||||||||||||    
T  2213291 atcctcgtgaacttaactcaattggtaagaacaatgcataatatatgcaaggtccga 2213347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 2692238 - 2692274
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||| |||||| |||||||    
T  2692238 gacaatgcataatatatgcaagatccgagattcaaac 2692274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 3358414 - 3358450
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  3358414 gacaatgcataatatatgcaaagtccgaggttcaaac 3358450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 7081716 - 7081668
Alignment:
Q  132 cgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||| |||||| |||||| ||||||||||||||||||    
T  7081716 cgtgagcttagctcagttgataaagacaatacataatatatgcaaggtc 7081668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 8138520 - 8138472
Alignment:
Q  132 cgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtc 179  Q
    |||||| ||||||||| |||||||| |||||||||||||||| ||||||    
T  8138520 cgtgaatttagctcagttgataagaacaatgcataatatatgtaaggtc 8138472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 8569732 - 8569768
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  8569732 gacaatgcataatatatgcaaggtccggggttcaaac 8569768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 8809330 - 8809370
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||| |||||| ||||||| ||||    
T  8809330 acaatgcataatatatgcaagatccgaggttcaaaccccga 8809370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 17113497 - 17113461
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaact 192  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  17113497 acaatgcataatatatgcaaggtctgaggttcaaact 17113461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 17829372 - 17829304
Alignment:
Q  130 cccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccgaa 197  Q
    ||||||| |||||||||| || |||| || ||||||||||||||||| ||||||| ||| ||| |||||    
T  17829372 cccgtgagcttagctcagttggtaaggactatgcataatatatgcaaagtccgaggttcgaaccccgaa 17829304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 19265564 - 19265524
Alignment:
Q  153 aagacaatgcataatatatgcaaggtccgagtttcaaactc 193  Q
    |||||||||||||| |||||||||||||| | |||||||||    
T  19265564 aagacaatgcataaaatatgcaaggtccggggttcaaactc 19265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 23903368 - 23903304
Alignment:
Q  132 cgtgaacttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| ||||||| || || |||||||||||||||||||||||| || || | ||||||| ||||    
T  23903368 cgtgagcttagctgagttggtaagacaatgcataatatatgcaacgttcggggttcaaacaccga 23903304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 26356119 - 26356079
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  26356119 gacaatgcataatatatgcaaggttcggggttcaaactccg 26356079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 28046241 - 28046193
Alignment:
Q  131 ccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggt 178  Q
    |||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  28046241 ccgtgagcttagttcagttgataaagacaatgcataatatatgcaaggt 28046193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 28231463 - 28231423
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||||| | |||| ||||||    
T  28231463 gacaatgcataatatatgcaaggtccggggttcacactccg 28231423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 32053811 - 32053851
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  32053811 gacaatgcataatatatgcaaggttcgtggttcaaactccg 32053851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 32193914 - 32193862
Alignment:
Q  139 ttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaa 190  Q
    ||||||||| || ||||| |||||||||||||||||||||| |||| ||||||    
T  32193914 ttagctcagttggtaagaacaatgcataatatatgcaaggtacgaggttcaaa 32193862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 39280884 - 39280818
Alignment:
Q  128 tccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaactc 193  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||||||||||| | |||||||||    
T  39280884 tccccgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccggggttcaaactc 39280818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 5458133 - 5458085
Alignment:
Q  132 cgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  5458133 cgtgagcttagctcagttgataagaacaatgcataatatatgcaaggtc 5458085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 7872810 - 7872762
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||||    
T  7872810 cgtgaacttagctcagttggtaaggacaatgcataatatatgcaaggtc 7872762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 8615023 - 8615074
Alignment:
Q  133 gtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgag 183  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||||    
T  8615023 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccgag 8615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 20085800 - 20085761
Alignment:
Q  152 taagacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  20085800 taagacaatgcataatatatgcaaggtccggggttcaaac 20085761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 38553813 - 38553864
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    |||||||||||||||||||| || |||| ||||||||||||||||| |||||    
T  38553813 tccccgtgaacttagctcagttggtaagaacaatgcataatatatgtaaggt 38553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 41250102 - 41250051
Alignment:
Q  139 ttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaa 189  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||| |||||    
T  41250102 ttagctcagttgataagaacaatgtataatatatgcaaggtccgaggttcaa 41250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 48527188 - 48527239
Alignment:
Q  131 ccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||||| |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  48527188 ccgtgagcttatctcagttgataaggacaatgcataatatatgcaaggtccg 48527239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 2618674 - 2618728
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||||||| ||| |||||| || |||| ||||||||||||||||||||||||||    
T  2618674 tccccgtgagcttcgctcagttggtaaggacaatgcataatatatgcaaggtccg 2618728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 4047785 - 4047831
Alignment:
Q  132 cgtgaacttagctcagctgataagacaatgcataatatatgcaaggt 178  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||||    
T  4047785 cgtgagcttagctcagttgataggataatgcataatatatgcaaggt 4047831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 18714453 - 18714507
Alignment:
Q  138 cttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||| || |||| |||||||||||||||||||||||||| | |||||||    
T  18714453 cttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaac 18714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 35224141 - 35224179
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactc 193  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  35224141 gacaatgcataaaatatgcaaggtccgggtttcaaactc 35224179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 42336069 - 42336119
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||||| ||||||||| ||||||| ||||||||||||| ||||||||||||    
T  42336069 cgtgaatttagctcagttgataaggacaatgcataatacatgcaaggtccg 42336119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 3584227 - 3584268
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||| |||| ||||||| ||||    
T  3584227 gacaatgcataatatatgcaaggtacgagattcaaaccccga 3584268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 18023702 - 18023743
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  18023702 gacaatgcataatatatgcaaggtccagggttcaaactccga 18023743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 19599168 - 19599209
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||| | ||||||| ||||    
T  19599168 gacaatgcataatatatgcaaggtccggggttcaaaccccga 19599209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 28736672 - 28736635
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  28736672 agacaatgcatgatatatgcaaggtccgaggttcaaac 28736635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 184
Target Start/End: Original strand, 41527583 - 41527612
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagt 184  Q
    ||||||||||||||||||||||||||||||    
T  41527583 gacaatgcataatatatgcaaggtccgagt 41527612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 42227843 - 42227802
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  42227843 gacaatgcataatatatgtaaggttcgaggttcaaactccga 42227802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 44651628 - 44651669
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||| |||  ||||||||||||    
T  44651628 gacaatgcataatatatgcaaggttcgaagttcaaactccga 44651669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 44868193 - 44868152
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||| |||||||||| |||||| |||||    
T  44868193 gacaatgcataatatatgtaaggtccgaggttcaaattccga 44868152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 46987086 - 46987135
Alignment:
Q  133 gtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  46987086 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 46987135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 47342472 - 47342431
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  47342472 gacaatgcataatatatgcaaggtccggagttcaaactccga 47342431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 10244750 - 10244786
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  10244750 gacaatgcataatatatgcaaggtccggggttcaaac 10244786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 19626563 - 19626527
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  19626563 gacaatgcataatatatgcaaggtccggggttcaaac 19626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 27462474 - 27462438
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  27462474 gacaatgcataatatatgcaaggtccggggttcaaac 27462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 36755014 - 36755078
Alignment:
Q  132 cgtgaacttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||| ||||| || || |||||||||||||||||| ||||| || | ||||||||||||    
T  36755014 cgtgagcttaactcagttggtaggacaatgcataatatatgtaaggttcgggattcaaactccga 36755078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 36760811 - 36760875
Alignment:
Q  132 cgtgaacttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||| ||||| || || |||||||||||||||||| ||||| || | ||||||||||||    
T  36760811 cgtgagcttaactcagttggtaggacaatgcataatatatgtaaggttcgggattcaaactccga 36760875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 39926600 - 39926556
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaa 175  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||    
T  39926600 cgtgagcttagctcagttgataaggacaatgcataatatatgcaa 39926556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 41029269 - 41029321
Alignment:
Q  130 cccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||||| |||||||||| || |||| |||||| |||||||||||||||||||    
T  41029269 cccgtgagcttagctcagttggtaaggacaatgtataatatatgcaaggtccg 41029321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 42829272 - 42829232
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||| |||| | |||||||||||    
T  42829272 gacaatgcataatatatgcaagctccggggttcaaactccg 42829232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 46737808 - 46737844
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  46737808 gacaatgcataatatatgcaaggtccggggttcaaac 46737844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 42208536 - 42208471
Alignment:
Q  127 atccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||| |||||||    
T  42208536 atccccgtgaatttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaac 42208471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 44019544 - 44019599
Alignment:
Q  128 tccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccga 182  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||    
T  44019544 tccccgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccga 44019599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 24195249 - 24195313
Alignment:
Q  133 gtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||| ||||| || |||| |||||||||||||||||||| | ||||||||||||    
T  24195249 gtgaacttagctcagttgatatgaacaatacataatatatgcaaggtccggggttcaaactccga 24195313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 4263815 - 4263873
Alignment:
Q  133 gtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaa 190  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||||||||||| ||||||    
T  4263815 gtgaacttaactcagttgataagaacaatgcataatgtatgcaaggtccgaggttcaaa 4263873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 19778060 - 19778114
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||||||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  19778060 tccccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 19778114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 5881039 - 5880986
Alignment:
Q  138 cttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| |||||||    
T  5881039 cttagctcagttgataagacaatgcataatatatacaaggtttgagattcaaac 5880986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 27718956 - 27718891
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||||||   ||||||||||||    
T  27718956 cgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccga 27718891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 7553702 - 7553742
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  7553702 gacaatgcataatatatgcaaggtccaaggttcaaactccg 7553742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 11771712 - 11771760
Alignment:
Q  138 cttagctcagctgata-agacaatgcataatatatgcaaggtccgagtt 185  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  11771712 cttagctcagttgatagagacaatacataatatatgcaaggtccgagtt 11771760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 6314385 - 6314334
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccga 182  Q
    ||||| |||||||||| ||||||| ||||||||||| |||||||||||||||    
T  6314385 cgtgagcttagctcagttgataaggacaatgcataaaatatgcaaggtccga 6314334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 24791500 - 24791457
Alignment:
Q  138 cttagctcagctgataagacaatgcataatatatgcaaggtccg 181  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||    
T  24791500 cttaactcagttgataaaacaatgcataatatatgcaaggtccg 24791457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 31888023 - 31888074
Alignment:
Q  130 cccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    |||||||||||||||||| || |||| |||||| ||||||||||||||||||    
T  31888023 cccgtgaacttagctcagttggtaaggacaatggataatatatgcaaggtcc 31888074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 17704006 - 17704060
Alignment:
Q  126 tatccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| ||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  17704006 tatcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 17704060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 29652224 - 29652266
Alignment:
Q  139 ttagctcagctgataaga-caatgcataatatatgcaaggtcc 180  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  29652224 ttagctcagttgataagaacaatgcataatatatgcaaggtcc 29652266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 42367724 - 42367778
Alignment:
Q  128 tccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccg 181  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||| || |||||    
T  42367724 tccccgtgagcttagctcagttgataagaacaatgcataatatatgaaaagtccg 42367778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 43778041 - 43778083
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||    
T  43778041 agacaatgcataaaatatgcaaggtctgaggttcaaactccga 43778083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 574384 - 574433
Alignment:
Q  133 gtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccg 181  Q
    |||| |||||||||| ||||| ||||||||||||||||||| ||||||||    
T  574384 gtgagcttagctcagttgatatagacaatgcataatatatgtaaggtccg 574433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 1244768 - 1244719
Alignment:
Q  131 ccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||||||||||||||| || |||| |||||||||||||||| |||||||    
T  1244768 ccgtgaacttagctcagttggtaaggacaatgcataatatatacaaggtc 1244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 5728531 - 5728588
Alignment:
Q  126 tatccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccga 182  Q
    ||||| ||||| |||||||||| |||| ||| |||||||||||||||||||| |||||    
T  5728531 tatcctcgtgagcttagctcagttgatgagaacaatgcataatatatgcaagctccga 5728588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 11709009 - 11709050
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||||  ||||||| ||||    
T  11709009 gacaatgcataatatatgcaaggtccgaagttcaaaccccga 11709050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 33743598 - 33743635
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaact 192  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  33743598 gacaatgcataaaatatgcaaggtccgaggttcaaact 33743635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 1877724 - 1877676
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtc 179  Q
    ||||| |||| ||||| ||||| ||||||||||||||||||||||||||    
T  1877724 cgtgagcttaactcagttgatatagacaatgcataatatatgcaaggtc 1877676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 6038337 - 6038273
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||| ||||| | ||||||||||||||||| |||||| |   |||||||||||    
T  6038337 cgtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccg 6038273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 12748924 - 12748960
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  12748924 gacaatgcataatatatgcaaggtccggggttcaaac 12748960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 13357479 - 13357443
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||| |||| |||||||    
T  13357479 gacaatgcataatatatgcaaggtacgaggttcaaac 13357443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 24696044 - 24696008
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||| |||||| |||||||    
T  24696044 gacaatgcataatatatgcaagatccgagattcaaac 24696008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 27587220 - 27587280
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| || |||| ||||||||| |||||||||||||||| | |||||||    
T  27587220 cgtgagcttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttcaaac 27587280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 28084275 - 28084343
Alignment:
Q  126 tatccccgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaactc 193  Q
    ||||| ||||| |||| ||||| ||||| |||||||| |||||||||||||||| |||  |||||||||    
T  28084275 tatcctcgtgagcttaactcagttgatagagacaatgaataatatatgcaaggttcgatgttcaaactc 28084343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 30623288 - 30623340
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||| |||| |||||||||| || |||| ||||||||||||||||||||||||    
T  30623288 tccctgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 30623340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 32051570 - 32051534
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  32051570 gacaatgcataatatatgcaaggtccggggttcaaac 32051534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 32878656 - 32878712
Alignment:
Q  128 tccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgag 183  Q
    ||||||||| |||||||||| || ||||| ||||||||||||||||| |||| ||||    
T  32878656 tccccgtgagcttagctcagttggtaagaacaatgcataatatatgcgaggttcgag 32878712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 33105390 - 33105450
Alignment:
Q  132 cgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| ||||||||||||| |  || ||||||||||||||||||||||||| | |||||||    
T  33105390 cgtgagcttagctcagctggtttgaacaatgcataatatatgcaaggtccggggttcaaac 33105450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 37141380 - 37141420
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  37141380 gacaatgcataatatatgcaaggttcggggttcaaactccg 37141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 42700527 - 42700567
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactcc 194  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  42700527 agacaatgcataatatatgcaaggtatgaggttcaaactcc 42700567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 10843389 - 10843333
Alignment:
Q  126 tatccccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtccg 181  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  10843389 tatccccgtgaacttagctcagttgataaggataatgcataatatatgcaaggtccg 10843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 16307645 - 16307696
Alignment:
Q  128 tccccgtgaacttagctcagctgataagacaatgcataatatatgcaaggtc 179  Q
    ||||||||| ||||| ||||||| || |||||||||||||||||||||||||    
T  16307645 tccccgtgagcttagttcagctggtaggacaatgcataatatatgcaaggtc 16307696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 38448932 - 38448878
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||||||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  38448932 tccccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 38448878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 8269430 - 8269365
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||| || |||| ||||| |||||||||||||||||||| | ||||||| ||||    
T  8269430 cgtgaacttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccga 8269365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 10132515 - 10132458
Alignment:
Q  123 atctatccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||| ||||||||||||||| |||| || |||| ||||||||||||||||||||||||    
T  10132515 atctgtccccgtgaacttagatcagttggtaaggacaatgcataatatatgcaaggtc 10132458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 30795700 - 30795749
Alignment:
Q  132 cgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtcc 180  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  30795700 cgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtcc 30795749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 6000181 - 6000145
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||||| |||||||    
T  6000181 gacaatgcataatatatgcaaggtccgaggttcaaac 6000145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 16967232 - 16967192
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  16967232 gacaatgcataatatatgcaaggttcgaggttcaaactccg 16967192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 47528513 - 47528457
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgag 183  Q
    ||||||||| |||||||||| || |||| ||||||||||||||| ||||||||||||    
T  47528513 tccccgtgagcttagctcagttggtaaggacaatgcataatatacgcaaggtccgag 47528457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 17283948 - 17283999
Alignment:
Q  130 cccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    ||||||| |||||||||| || |||| |||||||||||||||||||||||||    
T  17283948 cccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtcc 17283999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 19620571 - 19620634
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaa 190  Q
    ||||||||| |||||||||| || |||| ||||| |||||||||||||||||||| | ||||||    
T  19620571 tccccgtgagcttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaa 19620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 3510003 - 3509953
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    |||||||||||||||| || || | ||||||||||||||||||||||||||    
T  3510003 cgtgaacttagctcagttggtatggacaatgcataatatatgcaaggtccg 3509953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 10654487 - 10654449
Alignment:
Q  153 aagacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  10654487 aagacaatgcataatatatgcaaggtccgtggttcaaac 10654449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 13779579 - 13779621
Alignment:
Q  134 tgaacttagctcagctgata-agacaatgcataatatatgcaa 175  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  13779579 tgaacttagctcagttgatatagacaatgcataatatatgcaa 13779621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 22335381 - 22335423
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccgaa 197  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||    
T  22335381 gacaatgcataatatatgcaaggtctgaggttcaaaccccgaa 22335423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 24324462 - 24324416
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaagg 177  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  24324462 cgtgagcttagctcaggtgataaggacaatgcataatatatgcaagg 24324416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 26763612 - 26763566
Alignment:
Q  125 ctatccccgtgaacttagctcagctgataag-acaatgcataatata 170  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||    
T  26763612 ctatccccgtgagcttagctcagttgataagaacaatgcataatata 26763566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 33153918 - 33153876
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccgaa 197  Q
    |||||||||||||||||| |||||||||| ||||||| |||||    
T  33153918 gacaatgcataatatatgtaaggtccgaggttcaaaccccgaa 33153876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 52441573 - 52441523
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccg 181  Q
    ||||| |||||||||| || || ||||||||||||||||||||||||||||    
T  52441573 cgtgagcttagctcagttggtatagacaatgcataatatatgcaaggtccg 52441523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 3693858 - 3693793
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||||||||| ||||| |||||| |||||||||||| |||||| ||| ||||||| ||||    
T  3693858 cgtgagcttagctcagttgatatagacaaagcataatatatgtaaggtctgaggttcaaaccccga 3693793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 5907794 - 5907847
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    ||||||||| |||||||||| ||  ||| |||||||||||||||||||||||||    
T  5907794 tccccgtgagcttagctcagttggcaaggacaatgcataatatatgcaaggtcc 5907847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 16967007 - 16966970
Alignment:
Q  158 aatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  16967007 aatgcataatatatgcaaggttcgaggttcaaactccg 16966970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 22946613 - 22946564
Alignment:
Q  131 ccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtc 179  Q
    |||||||||||||| || || ||||| |||||||||||||||||||||||    
T  22946613 ccgtgaacttagcttagttggtaagaacaatgcataatatatgcaaggtc 22946564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 45140072 - 45140019
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    ||||||||| |||||||||| || || | |||||||||||||||||||||||||    
T  45140072 tccccgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtcc 45140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 47961328 - 47961299
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgag 183  Q
    ||||||||||||||||||||||||||||||    
T  47961328 agacaatgcataatatatgcaaggtccgag 47961299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 49868037 - 49868070
Alignment:
Q  158 aatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||| |||||||    
T  49868037 aatgcataatatatgcaaggtccgagattcaaac 49868070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 563200 - 563264
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||| |||||||||| ||||||| ||||  ||||||||||||||||||||   |||||||||||    
T  563200 cgtgagcttagctcagttgataaggacaaaacataatatatgcaaggtccggagttcaaactccg 563264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 2596977 - 2596937
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||| |||||||||||||| | ||||||||||||    
T  2596977 acaatgcataaaatatgcaaggtccggggttcaaactccga 2596937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 6809865 - 6809817
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaa 175  Q
    |||||||||||||||||||| |  |||| ||||||||||||||||||||    
T  6809865 tccccgtgaacttagctcagtttgtaaggacaatgcataatatatgcaa 6809817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 12269021 - 12268981
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||||| | ||||||| ||||    
T  12269021 acaatgcataatatatgcaaggtccggggttcaaaccccga 12268981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 13794570 - 13794522
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||| ||||||| | ||||||||||||||||||||||    
T  13794570 cgtgagcttagctcagttgataaggataatgcataatatatgcaaggtc 13794522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 16033488 - 16033448
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  16033488 gacaatgcataatatatgcaaggtctggggttcaaactccg 16033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 25532996 - 25533032
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  25532996 gacaatgcataatatatgcaaggtccggggttcaaac 25533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 26755615 - 26755675
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||| |||||||||| ||||| | ||||||||| |||||||||||||||| | |||||||    
T  26755615 cgtgagcttagctcagttgatatggacaatgcattatatatgcaaggtccggggttcaaac 26755675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 26803513 - 26803453
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||| || || | |||||||||||||||||||| ||||| | |||||||    
T  26803513 cgtgaacttagctcagttggtatggacaatgcataatatatgcaaagtccggggttcaaac 26803453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 32030976 - 32030920
Alignment:
Q  123 atctatccccgtgaacttagctcagctgata-agacaatgcataatatatgcaaggt 178  Q
    |||| |||||||||||||||||||| || ||  ||||||||||||||||| ||||||    
T  32030976 atctgtccccgtgaacttagctcagttgttagggacaatgcataatatatacaaggt 32030920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 33020081 - 33020045
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  33020081 gacaatgcataatatatgcaaggtctgaggttcaaac 33020045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 34521228 - 34521192
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  34521228 gacaatgcataatatatgcaaggtccggggttcaaac 34521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 45481516 - 45481556
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||||| | ||| |||||||    
T  45481516 gacaatgcataatatatgcaaggtccggggttcgaactccg 45481556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 46334775 - 46334839
Alignment:
Q  133 gtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||| ||||| |||||||| |||||||||| |||| ||||||| ||| ||||||| ||||    
T  46334775 gtgaacttaactcagttgataagaacaatgcataaaatatacaaggtctgagattcaaaccccga 46334839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 5702243 - 5702193
Alignment:
Q  128 tccccgtgaacttagctcagctgataagacaatgcataatatatgcaaggt 178  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  5702243 tccccgtgagcttagctcagttggtaagacaatgcataatatatgcaaggt 5702193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 4216461 - 4216413
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  4216461 cgtgaacttagctcagttgataaggacaatgcataatatatgcaaggtc 4216413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 45096021 - 45096073
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  45096021 tccccatgaacttagctcagttgataaggacaatgcataatatatgcaaggtc 45096073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 12746421 - 12746361
Alignment:
Q  130 cccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaa 189  Q
    |||||||||||||||||  || || | |||||||||||||||||||||||||||| |||||    
T  12746421 cccgtgaacttagctcaagtggtatggacaatgcataatatatgcaaggtccgagattcaa 12746361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 24348411 - 24348451
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  24348411 acaatgcataatatatgcaaggtcagaggttcaaactccga 24348451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 47099102 - 47099050
Alignment:
Q  127 atccccgtgaacttagctcagctgataagac-aatgcataatatatgcaaggt 178  Q
    |||||||||| |||||||||| ||||||||  |||||||||||||||||||||    
T  47099102 atccccgtgagcttagctcagttgataagaataatgcataatatatgcaaggt 47099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 47536518 - 47536478
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  47536518 gacaatgcataaaatatgcaaggtccgaggttcaaactccg 47536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 55126001 - 55126065
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||| |||||||||| |||| || ||||| ||||||||||||||||| |||| |||||||    
T  55126001 tccccgtgagcttagctcagttgatgaggacaatacataatatatgcaaggttcgaggttcaaac 55126065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 48688113 - 48688160
Alignment:
Q  131 ccgtgaacttagctcagctgataagacaatgcataatatatgcaaggt 178  Q
    ||||||||||||||||| || || |||||||||||||||||| |||||    
T  48688113 ccgtgaacttagctcagttggtatgacaatgcataatatatgtaaggt 48688160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 35492782 - 35492836
Alignment:
Q  122 tatctatccccgtgaacttagctcagctgataaga-caatgcataatatatgcaa 175  Q
    |||| |||||||| |||||||||||| || ||||| |||||||||||||||||||    
T  35492782 tatcgatccccgtaaacttagctcagttggtaagaacaatgcataatatatgcaa 35492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 48849823 - 48849765
Alignment:
Q  133 gtgaacttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||| |||| ||||| || || ||||||||||||||||||||||||||| | |||||||    
T  48849823 gtgagcttaactcagttggtatgacaatgcataatatatgcaaggtccggggttcaaac 48849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 1149140 - 1149083
Alignment:
Q  123 atctatccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    |||| ||| ||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  1149140 atctgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 1149083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 8075807 - 8075844
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  8075807 agacaatgcataatatatgcaaggtctgaggttcaaac 8075844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 26768400 - 26768465
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||| |||| |||||||| || ||||||||||||| |||||||||||| ||| ||||||| ||||    
T  26768400 cgtgagcttatctcagctggtatagacaatgcataaaatatgcaaggtctgagcttcaaaccccga 26768465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 28430602 - 28430565
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactc 193  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  28430602 acaatgcataatatatgcaaggtctgaggttcaaactc 28430565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 34899120 - 34899161
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||| | ||||||| ||||    
T  34899120 gacaatgcataatatatgcaaggtccggggttcaaaccccga 34899161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 41834590 - 41834526
Alignment:
Q  134 tgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaactccgaaa 198  Q
    |||||||| ||||| ||||| | |||||||||||||||||||| ||||||  ||||||||||||||    
T  41834590 tgaacttaactcagatgatataaacaatgcataatatatgcaatgtccga-attcaaactccgaaa 41834526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 48656938 - 48656901
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||||| | |||||||    
T  48656938 agacaatgcataatatatgcaaggtccggggttcaaac 48656901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 5349551 - 5349587
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||| |||||||||||||||||| |||||||    
T  5349551 gacaatgcattatatatgcaaggtccgaggttcaaac 5349587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 7626500 - 7626460
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactcc 194  Q
    ||||||||||||| |||||||||||||| | ||||||||||    
T  7626500 agacaatgcataaaatatgcaaggtccggggttcaaactcc 7626460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 8238587 - 8238627
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  8238587 gacaatgcataatatatgcaaggtctggggttcaaactccg 8238627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 13800667 - 13800715
Alignment:
Q  133 gtgaacttagctcagctgataaga-caatgcataatatatgcaaggtcc 180  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  13800667 gtgagcttagctcagttggtaagaacaatgcataatatatgcaaggtcc 13800715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 22722426 - 22722466
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  22722426 acaatgcataaaatatgcaaggtccgaggttcaaaccccga 22722466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 24428511 - 24428475
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  24428511 gacaatgcataatatatgcaaagtccgaggttcaaac 24428475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 38130997 - 38130961
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  38130997 gacaatgcataatatatgcaaggtccggggttcaaac 38130961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 40575648 - 40575612
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaa 190  Q
    |||||||||||||||||||||||||||| | ||||||    
T  40575648 agacaatgcataatatatgcaaggtccggggttcaaa 40575612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 41817522 - 41817558
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  41817522 gacaatgcataatatatgcaaggtccggggttcaaac 41817558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 45431971 - 45432007
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  45431971 gacaatgcataatatatgcaaggtccggggttcaaac 45432007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 53207965 - 53208017
Alignment:
Q  128 tccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtc 179  Q
    ||||||||| |||||||||| || ||||  |||||||||||||||||||||||    
T  53207965 tccccgtgagcttagctcagttggtaagggcaatgcataatatatgcaaggtc 53208017  T

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Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 17144474 - 17144526
Alignment:
Q  128 tccccgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtc 179  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  17144474 tccccgtgaacttaactcagctgttaagaacaatgcataatatatgcaaggtc 17144526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 1669646 - 1669598
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaa 175  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||    
T  1669646 tccccgtgaacttagctcagttggtaagaacaatgcataatatatgcaa 1669598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 26376961 - 26377029
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||||||| || |||| |||||||||| ||||||||| ||||| | ||| |||||||    
T  26376961 tccccgtgaacttagctcagttggtaaggacaatgcatattatatgcaacgtccggggttcgaactccg 26377029  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 11844500 - 11844453
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||    
T  11844500 cgtgaacttagctcagttggtaaggacaatgcataatatatgcaaggt 11844453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 22394034 - 22394097
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactcc 194  Q
    ||||| |||||||||| ||||| | ||||||||||||||||| ||| |||||| ||||||||||    
T  22394034 cgtgagcttagctcagttgatatggacaatgcataatatatgtaagatccgaggttcaaactcc 22394097  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 39938769 - 39938808
Alignment:
Q  143 ctcagctgataagacaatgcataatatatgcaaggtccga 182  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39938769 ctcagctgataggacaatacataatatatgcaaggtccga 39938808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 776686 - 776744
Alignment:
Q  138 cttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||| ||||| ||||  |||||||||||| |||||||||||| ||| ||||||||||||    
T  776686 cttaactcagttgattggacaatgcataaaatatgcaaggtctgaggttcaaactccga 776744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 8545051 - 8545001
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccg 181  Q
    ||||| |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  8545051 cgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccg 8545001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 35494012 - 35493970
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||| || | ||||||||||||    
T  35494012 agacaatgcataatatatgcaaggttcgggattcaaactccga 35493970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 41650977 - 41650947
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtt 185  Q
    |||||||||||||||||||||||||||||||    
T  41650977 gacaatgcataatatatgcaaggtccgagtt 41650947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 2951431 - 2951382
Alignment:
Q  130 cccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    ||||||||||||||||||| | |||| ||||||||||||||||| |||||    
T  2951431 cccgtgaacttagctcagccggtaaggacaatgcataatatatgtaaggt 2951382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 11647190 - 11647243
Alignment:
Q  126 tatccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggt 178  Q
    |||| ||||||||||| ||||| || |||| |||||||||||||||||||||||    
T  11647190 tatcgccgtgaacttaactcagttggtaaggacaatgcataatatatgcaaggt 11647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 37614489 - 37614428
Alignment:
Q  132 cgtgaacttagctcagctgata-agacaatgcataatatatgcaaggtccgagtttcaaact 192  Q
    ||||| |||||||||| || || |||||| |||||||||||||||||| |||| ||||||||    
T  37614489 cgtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttcaaact 37614428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 1538845 - 1538805
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    |||| ||||||||||||||||||||||| ||||||| ||||    
T  1538845 acaacgcataatatatgcaaggtccgaggttcaaacgccga 1538805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 6226366 - 6226306
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||| ||||||||| || |||| ||||||| |||||| ||||||||||| |||||||||    
T  6226366 cgtgaatttagctcagttggtaaggacaatgcctaatatctgcaaggtccgggtttcaaac 6226306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 8882465 - 8882401
Alignment:
Q  128 tccccgtgaacttagctcagctgataa-gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||| |||| ||||| |||||| |||| ||||||||||||| |||||||| | |||||||    
T  8882465 tccccgtgagcttaactcagttgataatgacagtgcataatatatgtaaggtccggggttcaaac 8882401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 16133127 - 16133079
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtc 179  Q
    ||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  16133127 cgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 16133079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 16579436 - 16579376
Alignment:
Q  132 cgtgaacttagctcagctgataaga-caatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||| ||||| || || || ||||||||||||||||||||||||| | |||||||    
T  16579436 cgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggtccgtggttcaaac 16579376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 18557877 - 18557913
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  18557877 gacaatgcataatatgtgcaaggtccgagattcaaac 18557913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 20125018 - 20125089
Alignment:
Q  124 tctatccccgtgaacttagctcagctgataagacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||| ||| | |||| ||||  ||||| |||||||||||||||||||||||| || | ||||||||||||    
T  20125018 tctatcctcgtaagcttaactcaattgataggacaatgcataatatatgcaaggttcg-ggttcaaactccga 20125089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 22522839 - 22522803
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  22522839 gacaatgcataatatatgcaaggtccggggttcaaac 22522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 27903137 - 27903177
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||| || | ||||||||||||    
T  27903137 acaatgcataatatatgcaaggttcggggttcaaactccga 27903177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 31602862 - 31602822
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||| |||| ||||||| ||||    
T  31602862 acaatgcataatatatgcaaggttcgagattcaaaccccga 31602822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 32806382 - 32806422
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  32806382 gacaatgcataatatatgcaaggtccgaagttcgaactccg 32806422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 40445993 - 40446041
Alignment:
Q  143 ctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaa 190  Q
    ||||| ||||||| |||||||||||||||||||||||| ||| ||||||    
T  40445993 ctcagttgataaggacaatgcataatatatgcaaggtctgaggttcaaa 40446041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 40715987 - 40715951
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||||| | |||||||    
T  40715987 gacaatgcataatatatgcaaggtccggggttcaaac 40715951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 25382 - 25437
Alignment:
Q  126 tatccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtcc 180  Q
    ||||||||||| |||| ||||| || |||| |||||||||||||||||||||||||    
T  25382 tatccccgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtcc 25437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 45938 - 46008
Alignment:
Q  128 tccccgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccgaa 197  Q
    |||||||||||||||||||| || |||| | |||| |||||||||||||| |||||| ||| ||| |||||    
T  45938 tccccgtgaacttagctcagttggtaagaataatgtataatatatgcaagatccgaggttcgaaccccgaa 46008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1619 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 1053 - 1090
Alignment:
Q  154 agacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    |||||||||||||||||||||||||||| | |||||||    
T  1053 agacaatgcataatatatgcaaggtccgggattcaaac 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 72813 - 72772
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  72813 gacaatgcataatatatgcaaggtccagggttcaaactccga 72772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 99060 - 99101
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||||||||||||||||| | | ||||||||||||    
T  99060 gacaatgcataatatatgcaaggtctggggttcaaactccga 99101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 1247 - 1311
Alignment:
Q  132 cgtgaacttagctcagctgataag-acaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    |||||||||||||||| ||||| | ||||||||||||||||| |||||| |   |||||||||||    
T  1247 cgtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccg 1311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 5205 - 5241
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaac 191  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  5205 gacaatgcataatatatgcaaggtctgaggttcaaac 5241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 40335 - 40375
Alignment:
Q  156 acaatgcataatatatgcaaggtccgagtttcaaactccga 196  Q
    ||||||||||| ||||||| |||||||| ||||||||||||    
T  40335 acaatgcataaaatatgcatggtccgaggttcaaactccga 40375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 31960 - 31920
Alignment:
Q  155 gacaatgcataatatatgcaaggtccgagtttcaaactccg 195  Q
    ||||||||||||||||||||||||||| | |||| ||||||    
T  31960 gacaatgcataatatatgcaaggtccggggttcacactccg 31920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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