View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13181_high_34 (Length: 265)
Name: NF13181_high_34
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13181_high_34 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 8287571 - 8287313
Alignment:
| Q |
7 |
gtgataagaacaattcaatattctatgacataaaaacgtgggcgctcgtggacaattgatacgtctcaacaattcataggttgtattgttttcttgtgct |
106 |
Q |
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| T |
8287571 |
gtgacaagaacaattcaatattctatgacataaaaacgtgggcgctcgtggacaattgatacgtctcaacaattcataggttgtattgttttcttgtgct |
8287472 |
T |
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| Q |
107 |
acaagagtttctagacgcacacacacccacgttacttttcaacttcgcatcaaaaaacaaaaccatctttctcacaatatataaacccaagcacaccaca |
206 |
Q |
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| T |
8287471 |
acaagagtttctagacgcacacacacccacgttacttttcaacttcgcatcaaaaaacaaaaccatctttctcacaatatataaacccaagcacaccaca |
8287372 |
T |
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| Q |
207 |
caatgcggaaatccgctgcagacagattcagacatcttttcaaccgttcgcttgtcttt |
265 |
Q |
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| T |
8287371 |
caatgcggaaatccgctgcagatagattcagacatcttttcaaccgttcgcttgtcttt |
8287313 |
T |
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