View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13181_high_37 (Length: 250)
Name: NF13181_high_37
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13181_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 32695882 - 32695660
Alignment:
| Q |
16 |
catattcattctcaatctccaacgccattttcccaactacaaccgatttaacactcttggagtacgaactattaactcttcattttctataagtaagtaa |
115 |
Q |
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| T |
32695882 |
catattcattctcaatctccaacaccattttcccaactacaaccgatttaacactcttggagtacgaactatcaactcttcattttctataagtaagtaa |
32695783 |
T |
|
| Q |
116 |
accttatttcacttagccaaataaattctacatgcaccctcactctccgtagagtttaactaaatattcgattttagaaattaggcaaaaatatggagta |
215 |
Q |
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||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32695782 |
accttatgtcacttggccaaataaattctacatgcatcctcactctccgtagagtttaactaaagattcgattttagaaattaggcaaaaatatggagta |
32695683 |
T |
|
| Q |
216 |
ccactgtatatgatatatagtat |
238 |
Q |
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||||| ||||||||||||||||| |
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| T |
32695682 |
ccactatatatgatatatagtat |
32695660 |
T |
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