View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13181_high_8 (Length: 559)

Name: NF13181_high_8
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13181_high_8
NF13181_high_8
[»] chr7 (29 HSPs)
chr7 (11-544)||(38286320-38286853)
chr7 (280-424)||(38173541-38173685)
chr7 (280-424)||(42796314-42796458)
chr7 (282-424)||(35083763-35083905)
chr7 (280-424)||(35073685-35073829)
chr7 (280-424)||(35084736-35084880)
chr7 (280-424)||(35100037-35100181)
chr7 (303-444)||(37883097-37883238)
chr7 (280-424)||(45585292-45585436)
chr7 (305-424)||(34145893-34146012)
chr7 (305-424)||(34181423-34181542)
chr7 (280-424)||(36745248-36745395)
chr7 (301-424)||(38166996-38167119)
chr7 (69-239)||(38157851-38158021)
chr7 (305-410)||(33859977-33860082)
chr7 (69-239)||(38150113-38150282)
chr7 (98-239)||(38188013-38188154)
chr7 (64-224)||(38173310-38173470)
chr7 (359-423)||(38158150-38158214)
chr7 (312-382)||(36469414-36469484)
chr7 (82-239)||(36745035-36745192)
chr7 (167-224)||(37883350-37883407)
chr7 (359-424)||(38150747-38150812)
chr7 (98-239)||(33860163-33860304)
chr7 (98-239)||(34146093-34146234)
chr7 (98-239)||(34181201-34181342)
chr7 (151-239)||(38166831-38166919)
chr7 (301-390)||(38188231-38188320)
chr7 (481-521)||(38088630-38088670)
[»] chr3 (1 HSPs)
chr3 (19-544)||(2223728-2224253)
[»] chr5 (1 HSPs)
chr5 (280-424)||(9663345-9663489)
[»] chr2 (5 HSPs)
chr2 (301-424)||(12410914-12411038)
chr2 (301-424)||(12422974-12423098)
chr2 (299-420)||(29196574-29196695)
chr2 (64-123)||(12409845-12409904)
chr2 (64-123)||(12421905-12421964)
[»] chr6 (10 HSPs)
chr6 (305-410)||(25562936-25563041)
chr6 (305-410)||(25568553-25568658)
chr6 (305-410)||(26102448-26102553)
chr6 (305-424)||(26002407-26002526)
chr6 (301-424)||(4164576-4164699)
chr6 (301-424)||(4226197-4226320)
chr6 (82-239)||(4164357-4164514)
chr6 (82-239)||(4225978-4226135)
chr6 (98-239)||(25563124-25563265)
chr6 (98-239)||(26102636-26102777)
[»] scaffold0176 (1 HSPs)
scaffold0176 (280-424)||(23943-24087)


Alignment Details
Target: chr7 (Bit Score: 510; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 11 - 544
Target Start/End: Original strand, 38286320 - 38286853
Alignment:
Q  11 atgaagggtaatgtgtatggacgtatgtaatcaaaatcagcatcatcatcatcttgatatgataagatcaattcaagacgtttgactcccttagcaattc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38286320 atgaagggtaatgtgtatggacgtatgtaatcaaaatcagcatcatcatcatcttgatatgataagatcaattcaagacgtttgactcccttagcaatta 38286419  T
Q  111 ctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgatgatgcagcatgaa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38286420 ctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgataatgcagcatgaa 38286519  T
Q  211 ttgatccactcttgcggtaaattcagattcgaccaattcatagagtgtgatgttttctggaaatttatcatagtcaaacaaggtacgaatatcaaagttg 310  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  38286520 ttgatccactcttgcggtaaattcagattcgacccattcatagagtgtgatgttttctggaaatttatcatagtcacacaaggtatgaatatcaaagttg 38286619  T
Q  311 aggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatgatataa 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38286620 aggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatgatataa 38286719  T
Q  411 cacaatcaggcaacacagggaactcagtcttgagtttttcactcctctccatctccatagttgctgcaagcacaccagaaattgaattaatagcataaac 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38286720 cacaatcaggcaacacagggaactcagtcttgagtttttcactcctctccatctccatagttgctgcaagaacaccagaaattgaattaatagcataaac 38286819  T
Q  511 aatgaaacaaaactttcatttgagtttagtaatt 544  Q
    ||||||||||||||||||||||||||||||||||    
T  38286820 aatgaaacaaaactttcatttgagtttagtaatt 38286853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 38173541 - 38173685
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| | || | | |||||| |||||||| || ||  ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  38173541 atagtcaaacatgttatggagatcaaaattgaggtcaattcttgatctccattcatgaagccatcgtttggacaatacacttgttttcaccaaatccttc 38173640  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38173641 aaacataactttgaaaagatatatgatataacacaatcaggcaac 38173685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 280 - 424
Target Start/End: Complemental strand, 42796458 - 42796314
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| |||| ||| |||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||    
T  42796458 atagtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtgaatccatcgtttggacaatgcgcttgttttcaccaaatccttc 42796359  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    ||||  ||||| ||||||||||| ||||||| |||||||||||||    
T  42796358 aaaccaaacttggaaaagatataagatataatacaatcaggcaac 42796314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 282 - 424
Target Start/End: Original strand, 35083763 - 35083905
Alignment:
Q  282 agtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaa 381  Q
    ||||||||| |||| ||| |||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||    
T  35083763 agtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtgaacccatcgtttggacaatgcactagttttcaccaaatccttcaa 35083862  T
Q  382 acataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |  |||||| ||||||||||| |||||||||| ||||||||||    
T  35083863 agctaacttggaaaagatataagatataacactatcaggcaac 35083905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 35073685 - 35073829
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| |||| ||| |||||||||||||||| |||| |||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||    
T  35073685 atagtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtgaacccatcgtttagacaatgcactagttttcaccaaatccttc 35073784  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||  |||||| ||||| ||||| ||||||| | |||||||||||    
T  35073785 aaagctaacttggaaaatatataagatataatagaatcaggcaac 35073829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 35084736 - 35084880
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| |||| ||| ||||||||||||||||  ||| |||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||    
T  35084736 atagtcaaacatggtatgaagatcaaagttgaggtccgcccttaatccccattcgtgaacccatcgtttagacaatgcactagttttcaccaaatccttc 35084835  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||  |||||| ||||||||||| ||||||| | |||||||||||    
T  35084836 aaagctaacttggaaaagatataagatataatagaatcaggcaac 35084880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 35100037 - 35100181
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| |||| ||| |||||||||||||||| |||| |||||||||||||||| |||| |||  |||||| |||| ||||||||||||||||||    
T  35100037 atagtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtgaacccatcgttcagacaatgcactagttttcaccaaatccttc 35100136  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||  |||||| ||||||||||| ||||||| | |||||||||||    
T  35100137 aaagctaacttggaaaagatataagatataatagaatcaggcaac 35100181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 303 - 444
Target Start/End: Complemental strand, 37883238 - 37883097
Alignment:
Q  303 caaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatata 402  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| |||||||   |||||||||||  |||||||||||| |||||||||||| || ||    
T  37883238 caaaattgaggtccatcctgaatccccattcgtgaagccattgttaggacaatgtgcttgttttcacggaatccttcaaacttaactttgaaaaaatgta 37883139  T
Q  403 tgatataacacaatcaggcaacacagggaactcagtcttgag 444  Q
     ||||||||||||||||||||  |||| || ||| |||||||    
T  37883138 cgatataacacaatcaggcaagtcaggtaaatcactcttgag 37883097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 45585292 - 45585436
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| |||| |   ||||||||| ||||||||||| |||||||| || |||| |||| ||||||| ||| |||||||||||||||||||||||    
T  45585292 atagtcaaacatggtatggtgatcaaagttaaggtccatccttaatccccaatcatgaatccattgtttggataatgcacttgttttcaccaaatccttc 45585391  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||  |||||| ||||||||||| ||||||| |  ||||||||||    
T  45585392 aaagctaacttggaaaagatataagatataatatgatcaggcaac 45585436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 305 - 424
Target Start/End: Complemental strand, 34146012 - 34145893
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |    
T  34146012 aagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaacttggaaaagatataag 34145913  T
Q  405 atataacacaatcaggcaac 424  Q
    |||||| |  ||||||||||    
T  34145912 atataatatgatcaggcaac 34145893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 305 - 424
Target Start/End: Original strand, 34181423 - 34181542
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |    
T  34181423 aagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaacttggaaaagatataag 34181522  T
Q  405 atataacacaatcaggcaac 424  Q
    |||||| |  ||||||||||    
T  34181523 atataatatgatcaggcaac 34181542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 36745248 - 36745395
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatcccca---ttcgtgaagccatagtttggacaatacacttgttttcaccaaatcc 376  Q
    |||||||||||  ||| | | |||||||||||| ||| || | ||||||||   |||||||| ||||  |||||| ||| ||||||||||||||||||||    
T  36745248 atagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccaatattcgtgaatccatcttttggataatgcacttgttttcaccaaatcc 36745347  T
Q  377 ttcaaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    ||||||  |||||| ||||||||||| |||||||||||||||||||||    
T  36745348 ttcaaagctaacttggaaaagatataagatataacacaatcaggcaac 36745395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 38166996 - 38167119
Alignment:
Q  301 atcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagata 400  Q
    ||||||||| ||||||||||| |||| |||||| ||||||||  | ||||||||| |||| |||||||||||||||||||||| |||||||||||| |||    
T  38166996 atcaaagtttaggtccatccttaatctccattcctgaagccaccgcttggacaatgcactggttttcaccaaatccttcaaacctaactttgaaaatata 38167095  T
Q  401 tatgatataacacaatcaggcaac 424  Q
       |||| || |||||||||||||    
T  38167096 atcgataaaatacaatcaggcaac 38167119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 38157851 - 38158021
Alignment:
Q  69 atgataagatcaattcaagacgtttgactcccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactag 168  Q
    |||| |||| |||||||| ||||||| | ||||||||||||||||||| |||||| || || |||  | || ||| ||||| ||||||||||||   |||    
T  38157851 atgagaagagcaattcaatacgtttggcacccttagcaattcctttggtaatcattctgtcaatggaatcattgtatttaggacctaatggaaaacttag 38157950  T
Q  169 tcggattgaccggatcatgtcaccttgatgatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
    ||||||||| |  |||||||| ||||||  |||||||||||||||||||| ||||  || |||||||||||    
T  38157951 tcggattgaactaatcatgtcgccttgaaaatgcagcatgaattgatccaatcttttggcaaattcagatt 38158021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 33860082 - 33859977
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  ||| || ||||||||||| |    
T  33860082 aagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaaattggaaaagatataag 33859983  T
Q  405 atataa 410  Q
    ||||||    
T  33859982 atataa 33859977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 38150113 - 38150282
Alignment:
Q  69 atgataagatcaattcaagacgtttgactcccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactag 168  Q
    |||| |||| |||||||| ||||||| | ||||||| |||||||||||||||||| || || ||  || |  ||||||||| ||||||||||||   ||     
T  38150113 atgagaagagcaattcaatacgtttggcacccttagtaattcctttggaaatcattctgtcaattgcatct-tgtgtttagaacctaatggaaaatttac 38150211  T
Q  169 tcggattgaccggatcatgtcaccttgatgatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
    ||||||||| |  ||||| ||| |||||| |||||||||||||||||||| ||||  || |||||||||||    
T  38150212 tcggattgaactaatcatatcatcttgataatgcagcatgaattgatccaatcttttggcaaattcagatt 38150282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 38188013 - 38188154
Alignment:
Q  98 cccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgat 197  Q
    |||||||||||||||||||||||||  || || |||||| || ||||||||||| ||||||||||   || ||| | ||| ||||| ||  |||||||||    
T  38188013 cccttagcaattcctttggaaatcactctgtcaatgacaacactgtgtttagtatctaatggaaaatttactcgaactgaacggatgatagcaccttgat 38188112  T
Q  198 gatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
     ||| |||||||||||||||| ||||| |  |||||||||||    
T  38188113 aatgtagcatgaattgatccaatcttgtgacaaattcagatt 38188154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 38173310 - 38173470
Alignment:
Q  64 ttgatatgataagatcaattcaagacgtttgactcccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaac 163  Q
    ||||||||| |||| || ||||| |||||  || |||||||||||||||||| |||||||  | || |||||| || | |||| | |||||||||||||     
T  38173310 ttgatatgagaagagcagttcaatacgttccacacccttagcaattcctttgaaaatcattttgtcaatgacatcactatgttgattacctaatggaaaa 38173409  T
Q  164 actagtcggattgaccggatcatgtcaccttgatgatgcagcatgaattgatccactcttg 224  Q
     | | ||| | ||| ||||||||||||||| |||| | |||||||||| |||||| |||||    
T  38173410 tccactcgaagtgaacggatcatgtcacctcgatgtttcagcatgaatcgatccattcttg 38173470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 38158150 - 38158214
Alignment:
Q  359 cttgttttcaccaaatccttcaaacataactttgaaaagatatatgatataacacaatcaggcaa 423  Q
    |||||||| |||||||||||||||| |||||||||||| |||| ||||| || ||||||||||||    
T  38158150 cttgtttttaccaaatccttcaaacctaactttgaaaatatatttgataaaatacaatcaggcaa 38158214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 36469484 - 36469414
Alignment:
Q  312 ggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaa 382  Q
    |||||||||| |||| ||| |||||||||||  ||||||| ||||| || |||||||||||||||||||||    
T  36469484 ggtccatccttaatctccactcgtgaagccaacgtttggataatacgctggttttcaccaaatccttcaaa 36469414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 36745035 - 36745192
Alignment:
Q  82 ttcaagacgtttgactcccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccgg 181  Q
    ||||| ||||||| | |||||||||||||||||||| ||||  || || ||| || |  |||||| | | |||||||||||   || ||||||||| | |    
T  36745035 ttcaatacgtttggcacccttagcaattcctttggagatcaatctatcaatggcatccctgtgttcattgcctaatggaaattttactcggattgaactg 36745134  T
Q  182 atcatgtcaccttgatgatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
    ||||||||||||| || ||| ||||  |||||||||| ||| | || |||||||||||    
T  36745135 atcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagatt 36745192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 37883407 - 37883350
Alignment:
Q  167 agtcggattgaccggatcatgtcaccttgatgatgcagcatgaattgatccactcttg 224  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||| |||||    
T  37883407 agtcggattgaactgatcatggtaccttgatgatgcagcatgaattgatccaatcttg 37883350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 38150747 - 38150812
Alignment:
Q  359 cttgttttcaccaaatccttcaaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    ||||||||||||||||||||||||| |||| ||||||||||||  |||| ||  ||||||||||||    
T  38150747 cttgttttcaccaaatccttcaaacctaaccttgaaaagatattcgataaaatgcaatcaggcaac 38150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 33860304 - 33860163
Alignment:
Q  98 cccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgat 197  Q
    |||||||||||||||||||| ||||  || || |||||| |  | |||| | ||| |||||||||   || ||| || || ||||||||| |||||| ||    
T  33860304 cccttagcaattcctttggagatcaatctatcaatgacatccctatgttcattacataatggaaattttactcgaatggaacggatcatggcacctttat 33860205  T
Q  198 gatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
     ||| ||||| |||||||||| ||||| || |||||||||||    
T  33860204 aatggagcataaattgatccaatcttgtggcaaattcagatt 33860163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 34146234 - 34146093
Alignment:
Q  98 cccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgat 197  Q
    |||||||||||||||||||| ||||  || || |||||| |  | |||| | ||| |||||||||   || ||| || || ||||||||| |||||| ||    
T  34146234 cccttagcaattcctttggagatcaatctatcaatgacatccctatgttcattacataatggaaattttactcgaatggaacggatcatggcacctttat 34146135  T
Q  198 gatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
     ||| ||||| |||||||||| ||||| || |||||||||||    
T  34146134 aatggagcataaattgatccaatcttgtggcaaattcagatt 34146093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 34181201 - 34181342
Alignment:
Q  98 cccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgat 197  Q
    |||||||||||||||||||| ||||  || || |||||| |  | |||| | ||| |||||||||   || ||| || || ||||||||| |||||| ||    
T  34181201 cccttagcaattcctttggagatcaatctatcaatgacatccctatgttcattacataatggaaattttactcgaatggaacggatcatggcacctttat 34181300  T
Q  198 gatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
     ||| ||||| |||||||||| ||||| || |||||||||||    
T  34181301 aatggagcataaattgatccaatcttgtggcaaattcagatt 34181342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 38166831 - 38166919
Alignment:
Q  151 acctaatggaaacactagtcggattgaccggatcatgtcaccttgatgatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
    ||||||||||||   || ||||||||| |  ||||| ||| |||||| |||||||||||||||||||| ||||  || |||||||||||    
T  38166831 acctaatggaaaatttactcggattgaactaatcatatcatcttgataatgcagcatgaattgatccaatcttttggcaaattcagatt 38166919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 38188231 - 38188320
Alignment:
Q  301 atcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactt 390  Q
    |||||| ||||| || || || |||||  |||| ||| ||||| ||||||||| |   ||||||||||||||||||||||||| ||||||    
T  38188231 atcaaaattgagatcaattcttaatcctaattcatgacgccattgtttggacagtgtgcttgttttcaccaaatccttcaaacctaactt 38188320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 521
Target Start/End: Complemental strand, 38088670 - 38088630
Alignment:
Q  481 cacaccagaaattgaattaatagcataaacaatgaaacaaa 521  Q
    |||||||||  |||||||||||||||||||||| |||||||    
T  38088670 cacaccagagtttgaattaatagcataaacaataaaacaaa 38088630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 19 - 544
Target Start/End: Original strand, 2223728 - 2224253
Alignment:
Q  19 taatgtgtatggacgtatgtaatcaaaatcagcatcatcatcatcttgatatgataagatcaattcaagacgtttgactcccttagcaattcctttggaa 118  Q
    |||| ||||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2223728 taatatgtatgggcgcatataatcagaatcagcatcatcatcatcttgatatgataagatcaattcaagacgtttgacacccttagcaattcctttggaa 2223827  T
Q  119 atcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgatgatgcagcatgaattgatcca 218  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  2223828 atcatcctttcaatgacacctgtgtgtttggtacctaatggaaacacgagtcggattgaatggatcatgtcaccttgataatgcagcatgaattgatcca 2223927  T
Q  219 ctcttgcggtaaattcagattcgaccaattcatagagtgtgatgttttctggaaatttatcatagtcaaacaaggtacgaatatcaaagttgaggtccat 318  Q
    ||||||||| |||||||||||||||| ||||| |||||||||||| || |||||||||||||||||||||||| |||   |||||||||||||||||||     
T  2223928 ctcttgcggcaaattcagattcgacccattcaaagagtgtgatgtcttttggaaatttatcatagtcaaacaaagtattgatatcaaagttgaggtccac 2224027  T
Q  319 cctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatgatataacacaatca 418  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2224028 cctgaatccccattcgtgaagccatagtttggacaatgtgattgttttcaccaaatccttcaaacctaactttgaaaagatatatgatataacacaatca 2224127  T
Q  419 ggcaacacagggaactcagtcttgagtttttcactcctctccatctccatagttgctgcaagcacaccagaaattgaattaatagcataaacaatgaaac 518  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||     
T  2224128 ggcaacacagggaactcagtcttgtgttttttactcctctccatctccattgttgccgcaagcacaccagaaattgaattaatagcctaaacaatgaaat 2224227  T
Q  519 aaaactttcatttgagtttagtaatt 544  Q
    |||| ||| ||||||||| |||||||    
T  2224228 aaaaatttgatttgagttcagtaatt 2224253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 280 - 424
Target Start/End: Complemental strand, 9663489 - 9663345
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| |||| ||| |||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||    
T  9663489 atagtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtgaacccatcgtttggacaatgcactagttttcaccaaatccttc 9663390  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||  ||||||  |||||||||| ||||||| || ||||||||||    
T  9663389 aaagctaacttgaaaaagatataagatataatactatcaggcaac 9663345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 12410914 - 12411038
Alignment:
Q  301 atcaaagttgaggtccatcctgaatcccc-attcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagat 399  Q
    |||||||||||||||||| || ||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||| ||| ||||||   ||||||    
T  12410914 atcaaagttgaggtccattcttaatcccccattcgtgaagccatcgtttggacaatgtacttgttttcaccaaatccttccaacttaacttgctaaagat 12411013  T
Q  400 atatgatataacacaatcaggcaac 424  Q
    ||| |||| |||||| |||||||||    
T  12411014 ataagatagaacacagtcaggcaac 12411038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 12422974 - 12423098
Alignment:
Q  301 atcaaagttgaggtccatcctgaatcccc-attcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagat 399  Q
    |||||||||||||||||| || ||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||| ||| ||||||   ||||||    
T  12422974 atcaaagttgaggtccattcttaatcccccattcgtgaagccatcgtttggacaatgtacttgttttcaccaaatccttccaacttaacttgctaaagat 12423073  T
Q  400 atatgatataacacaatcaggcaac 424  Q
    ||| |||| |||||| |||||||||    
T  12423074 ataagatagaacacagtcaggcaac 12423098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 299 - 420
Target Start/End: Original strand, 29196574 - 29196695
Alignment:
Q  299 atatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaaga 398  Q
    |||||||||||||||||| |  |  ||| |||||| |||| ||||  ||| |||||||  |||||||||||||||||||||| || |||||||||||| |    
T  29196574 atatcaaagttgaggtccttggttgatctccattcatgaatccatgttttagacaatatgcttgttttcaccaaatccttcatacttaactttgaaaata 29196673  T
Q  399 tatatgatataacacaatcagg 420  Q
    |||| || || |||||||||||    
T  29196674 tataagacatgacacaatcagg 29196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 12409845 - 12409904
Alignment:
Q  64 ttgatatgataagatcaattcaagacgtttgactcccttagcaattcctttggaaatcat 123  Q
    ||||||||| |||| || ||||| ||||||||| ||||| ||||||||||||||||||||    
T  12409845 ttgatatgagaagagcagttcaatacgtttgacacccttggcaattcctttggaaatcat 12409904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 12421905 - 12421964
Alignment:
Q  64 ttgatatgataagatcaattcaagacgtttgactcccttagcaattcctttggaaatcat 123  Q
    ||||||||| |||| || ||||| ||||||||| ||||| ||||||||||||||||||||    
T  12421905 ttgatatgagaagagcagttcaatacgtttgacacccttggcaattcctttggaaatcat 12421964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 25563041 - 25562936
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |    
T  25563041 aagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaacttggaaaagatataag 25562942  T
Q  405 atataa 410  Q
    ||||||    
T  25562941 atataa 25562936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 25568658 - 25568553
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |    
T  25568658 aagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaacttggaaaagatataag 25568559  T
Q  405 atataa 410  Q
    ||||||    
T  25568558 atataa 25568553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 26102553 - 26102448
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |    
T  26102553 aagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaacttggaaaagatataag 26102454  T
Q  405 atataa 410  Q
    ||||||    
T  26102453 atataa 26102448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 424
Target Start/End: Complemental strand, 26002526 - 26002407
Alignment:
Q  305 aagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagatatatg 404  Q
    ||||| ||||||| ||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |    
T  26002526 aagttaaggtccacccttaatccccattcgtgaatccattgtttggacaatgcactggttttcaccaaatctttcaaagctaacttggaaaagatataag 26002427  T
Q  405 atataacacaatcaggcaac 424  Q
    |||||| |  ||||||||||    
T  26002426 atataatatgatcaggcaac 26002407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 4164576 - 4164699
Alignment:
Q  301 atcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagata 400  Q
    |||||||||||||||  | | ||| |||||||||||||||||| |||| ||||||   || ||||| |||||||| |||| || |||||| ||||||||     
T  4164576 atcaaagttgaggtctgtacggaaaccccattcgtgaagccattgtttcgacaatgtgctagtttttaccaaatctttcatacttaacttggaaaagatg 4164675  T
Q  401 tatgatataacacaatcaggcaac 424  Q
    || |||| || |||||||||||||    
T  4164676 taagatacaatacaatcaggcaac 4164699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 4226197 - 4226320
Alignment:
Q  301 atcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttcaaacataactttgaaaagata 400  Q
    |||||||||||||||  | | ||| |||||||||||||||||| |||| ||||||   || ||||| |||||||| |||| || |||||| ||||||||     
T  4226197 atcaaagttgaggtctgtacggaaaccccattcgtgaagccattgtttcgacaatgtgctagtttttaccaaatctttcatacttaacttggaaaagatg 4226296  T
Q  401 tatgatataacacaatcaggcaac 424  Q
    || |||| || |||||||||||||    
T  4226297 taagatacaatacaatcaggcaac 4226320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 4164357 - 4164514
Alignment:
Q  82 ttcaagacgtttgactcccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccgg 181  Q
    ||||| ||||||| | |||||||||||||||||||||||||   | || |||||| |  | ||||    ||||||||||||   || |||||||||  ||    
T  4164357 ttcaatacgtttggcacccttagcaattcctttggaaatcaatttgtcaatgacatccctatgttggtcacctaatggaaaatttactcggattgaatgg 4164456  T
Q  182 atcatgtcaccttgatgatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
    |||||| ||||||| | ||||| |||||||||||||| | ||| || ||||| |||||    
T  4164457 atcatggcaccttggtaatgcatcatgaattgatccaatattgtggcaaattgagatt 4164514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 4225978 - 4226135
Alignment:
Q  82 ttcaagacgtttgactcccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccgg 181  Q
    ||||| ||||||| | |||||||||||||||||||||||||   | || |||||| |  | ||||    ||||||||||||   || |||||||||  ||    
T  4225978 ttcaatacgtttggcacccttagcaattcctttggaaatcaatttgtcaatgacatccctatgttggtcacctaatggaaaatttactcggattgaatgg 4226077  T
Q  182 atcatgtcaccttgatgatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
    |||||| ||||||| | ||||| |||||||||||||| | ||| || ||||| |||||    
T  4226078 atcatggcaccttggtaatgcatcatgaattgatccaatattgtggcaaattgagatt 4226135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 25563265 - 25563124
Alignment:
Q  98 cccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgat 197  Q
    |||||||||||||||||||| ||||  || |  |||||| |  | |||| | ||| |||||||||   || ||| || || ||||| ||| |||||| ||    
T  25563265 cccttagcaattcctttggagatcaatctatgaatgacatccctatgttgattacataatggaaattttactcgaatggaacggatgatggcacctttat 25563166  T
Q  198 gatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
     ||||||||| |||||||||| ||||| || |||||||||||    
T  25563165 aatgcagcataaattgatccaatcttgtggaaaattcagatt 25563124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 26102777 - 26102636
Alignment:
Q  98 cccttagcaattcctttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccggatcatgtcaccttgat 197  Q
    |||||||||||||||||||| ||||  || |  |||||| |  | |||| | ||| |||||||||   || ||| || || ||||| ||| |||||| ||    
T  26102777 cccttagcaattcctttggagatcaatctatgaatgacatccctatgttgattacataatggaaattttactcgaatggaacggatgatggcacctttat 26102678  T
Q  198 gatgcagcatgaattgatccactcttgcggtaaattcagatt 239  Q
     ||||||||| |||||||||| ||||| || |||||||||||    
T  26102677 aatgcagcataaattgatccaatcttgtggaaaattcagatt 26102636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 424
Target Start/End: Original strand, 23943 - 24087
Alignment:
Q  280 atagtcaaacaaggtacgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgttttcaccaaatccttc 379  Q
    ||||||||||| ||||   | ||| ||||| ||||||||||  ||||||||||| |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  23943 atagtcaaacatggtatagagatcgaagtttaggtccatccgtaatccccattcatgaatccattgtttggacaatgcactggttttcaccaaatccttc 24042  T
Q  380 aaacataactttgaaaagatatatgatataacacaatcaggcaac 424  Q
    |||  |||||| ||||||||| | ||||||| |  ||||||||||    
T  24043 aaagctaacttggaaaagatacaagatataatatgatcaggcaac 24087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University