View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13181_low_16 (Length: 452)
Name: NF13181_low_16
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13181_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 21 - 431
Target Start/End: Original strand, 681526 - 681936
Alignment:
| Q |
21 |
ctatacgcagtgatgtctgtttttgttttattgaaaaattaaatataaatgattatcacgctaactataaaattatcaaataatgaaaaggtaccagaac |
120 |
Q |
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| T |
681526 |
ctatacgcagtgatgtctgtttttgttttattgaaaaattaaatataaatgattatcacgctaactataaaattatcaaataatgaaaaggtaccagaac |
681625 |
T |
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| Q |
121 |
taggtattg-cataaggtacaacgtcaacgtgtaatccttaaacttggatatgtagaagcaaataataagatcatgatcataataaaaagaatcaaatcc |
219 |
Q |
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| T |
681626 |
taggtattgacataaggtacaacgtcaacgtgtaatccttaaacttggatatgtagaagcaaataataagatcatgatcataataaaa-gaatcaaatcc |
681724 |
T |
|
| Q |
220 |
taagaaagtgaaattaagtatgaaatacgaatatattcacagctgccattattcatattcttatcttaactctgaattaatatacaagtaatagattttc |
319 |
Q |
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| T |
681725 |
taagaaagtgaaattaagtatgaaatacgaatatattcacagctgccattattcatattcttatcttaactctgaattaatatacaagtaatagattttc |
681824 |
T |
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| Q |
320 |
tagctaatagatttcattcgagtgttaaaagattcaaacatcttaaataagtagttaaattttcaatctctaacttgtaagttgaaagaaaagaattcac |
419 |
Q |
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| T |
681825 |
tagctaatagatttcattcgagtgttaaaagattcaaacatcttaaataaatagttaaattttcaatctctaacttgtaagttgaaagaaaagaattcac |
681924 |
T |
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| Q |
420 |
atttgtgtgtcc |
431 |
Q |
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| T |
681925 |
atttgtgtgtcc |
681936 |
T |
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