View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13181_low_19 (Length: 398)
Name: NF13181_low_19
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13181_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 13 - 380
Target Start/End: Original strand, 7080733 - 7081100
Alignment:
| Q |
13 |
aatattcatcatacataggaaccaaccacattgtgctatgtcaccacccctgaaacatttcaactaaattccaagtcactcttgttagcttatgctctca |
112 |
Q |
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| T |
7080733 |
aatattcatcatacataggaaccaaccacattgtgctatgtcaccacccctgaaatatttcaactaaattctaagtcactcttgttagcttatgctctca |
7080832 |
T |
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| Q |
113 |
aatttttgaccttgattccctaacatcggagaatcttgcagttatacaaatcaagacggtccaaatttaaagctcgataaataaaaagatacgttgtaaa |
212 |
Q |
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| T |
7080833 |
aatttttgacattgattccctaacatcggagaatcttgcacttatacaaatcaagacggtccaaatttaaagcttgataaataaaaagatacgttgtaaa |
7080932 |
T |
|
| Q |
213 |
tctcgatcaaaatcagatgatcgagattttcatgcattgactactttgaagcatttttccgacgacttgggctaaacgtttgaaacacaacactacctat |
312 |
Q |
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| T |
7080933 |
tcttgatcaaaatcagatgatcgagattttcatgcattgactactttgaagcatttttccgacgacgtggggtaaacgtttgaaacacaacactacctat |
7081032 |
T |
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| Q |
313 |
tgcaggaaactgatccatagcacaactcctacatttcaacccaagaggctccaatgcaccagtaacct |
380 |
Q |
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| T |
7081033 |
tgcaggaaactgatccatagcacaactcctacatttcaacccaagaggctccaatgcaccagtaacct |
7081100 |
T |
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