View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13181_low_47 (Length: 234)
Name: NF13181_low_47
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13181_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 51350059 - 51350270
Alignment:
| Q |
1 |
acacagcaaattatttaatgcttttactttttcaaaaagaaaaactttctaacataatacaacactttctattactacatttgcatgttcggaatgacag |
100 |
Q |
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| T |
51350059 |
acacagcaaattatttaatgcttttactttttcaaaaagaaaaactttctaacataatacaacactttctattactacatttgcatgttcggaatgacag |
51350158 |
T |
|
| Q |
101 |
aataatatcacagtgacattgattttattagagctgcaaagtatagtttctgtcaaattcacagaagcacaccgcgattctatcaaactcacc-taaatg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
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| T |
51350159 |
---aatatcacagtgacattgattttattagagctgcaaagtatagtttctgtcaaattcacagaagcacaccgcgattctatcaaattcaccataaatg |
51350255 |
T |
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| Q |
200 |
cgaatgtgcactcat |
214 |
Q |
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||||||||||||||| |
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| T |
51350256 |
cgaatgtgcactcat |
51350270 |
T |
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