View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13181_low_51 (Length: 226)
Name: NF13181_low_51
Description: NF13181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13181_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 39869664 - 39869861
Alignment:
| Q |
14 |
agcataggaggaggaagaacctgaacagttattcagaaggtgacttgctagttatttagctcgccaaatttcttcccttttaaaaaagtattaaacttgg |
113 |
Q |
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| T |
39869664 |
agcagaggaggaggaagaacctgaacagttattcagaaggtgacttgctagttatttagctcgccaaatttcttcccttttaaaaaagtattaaacttgg |
39869763 |
T |
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| Q |
114 |
tatttgagtattcattcatctctaaatgactaacaatgcctgatactggcagattacgcaaaggaaaagctagtgtaaggcctgaagatgaagaaact |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
39869764 |
tatttgagtattcattcatctctaaatgactaacaatgcctgatactggcagattacgcaaaggaaaagcttgtgtaaggcctgaagatgaagaaact |
39869861 |
T |
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