View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13183_high_8 (Length: 365)

Name: NF13183_high_8
Description: NF13183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13183_high_8
NF13183_high_8
[»] chr6 (34 HSPs)
chr6 (31-360)||(35015009-35015339)
chr6 (38-360)||(19983144-19983466)
chr6 (36-360)||(18583395-18583720)
chr6 (36-312)||(26089813-26090091)
chr6 (36-312)||(18002395-18002673)
chr6 (36-312)||(23995001-23995279)
chr6 (36-312)||(15742120-15742397)
chr6 (71-311)||(4991186-4991427)
chr6 (48-264)||(22585495-22585711)
chr6 (48-264)||(22590326-22590542)
chr6 (48-316)||(15889601-15889871)
chr6 (47-264)||(15004856-15005072)
chr6 (74-264)||(25640505-25640694)
chr6 (74-220)||(32276756-32276902)
chr6 (40-92)||(13014822-13014874)
chr6 (36-92)||(32898868-32898924)
chr6 (36-87)||(25744331-25744382)
chr6 (36-92)||(18570357-18570413)
chr6 (36-92)||(22441012-22441068)
chr6 (31-92)||(18777219-18777280)
chr6 (74-171)||(19629447-19629544)
chr6 (36-92)||(18432721-18432777)
chr6 (36-92)||(31628346-31628402)
chr6 (76-165)||(26512260-26512349)
chr6 (76-165)||(26517376-26517465)
chr6 (36-92)||(16106594-16106650)
chr6 (71-171)||(16300022-16300122)
chr6 (71-171)||(18823429-18823529)
chr6 (71-155)||(18839300-18839384)
chr6 (280-313)||(1650020-1650053)
chr6 (296-353)||(21623506-21623563)
chr6 (36-92)||(16086095-16086151)
chr6 (280-312)||(16232199-16232231)
chr6 (280-312)||(19610325-19610357)
[»] chr7 (44 HSPs)
chr7 (31-360)||(32493898-32494228)
chr7 (31-360)||(126488-126818)
chr7 (31-360)||(111121-111451)
chr7 (48-360)||(1936869-1937177)
chr7 (36-312)||(2028999-2029276)
chr7 (36-312)||(42056188-42056466)
chr7 (36-312)||(2190085-2190363)
chr7 (36-312)||(3049661-3049937)
chr7 (74-264)||(39291458-39291648)
chr7 (179-308)||(15516765-15516896)
chr7 (71-264)||(13352065-13352258)
chr7 (280-353)||(3060271-3060344)
chr7 (281-360)||(7283908-7283987)
chr7 (32-118)||(44865304-44865391)
chr7 (36-88)||(39046740-39046792)
chr7 (36-118)||(143717-143800)
chr7 (36-118)||(47289859-47289942)
chr7 (50-234)||(15977820-15978004)
chr7 (31-116)||(35094889-35094974)
chr7 (36-92)||(3895103-3895159)
chr7 (36-92)||(11287495-11287551)
chr7 (32-92)||(12369953-12370013)
chr7 (71-171)||(371203-371303)
chr7 (36-92)||(15822544-15822600)
chr7 (278-353)||(13377849-13377924)
chr7 (36-92)||(7284173-7284229)
chr7 (36-92)||(12759065-12759121)
chr7 (138-258)||(18151259-18151379)
chr7 (36-92)||(26070377-26070433)
chr7 (36-92)||(26094164-26094220)
chr7 (296-353)||(13389693-13389750)
chr7 (296-345)||(17223797-17223846)
chr7 (275-312)||(25124445-25124482)
chr7 (280-312)||(7293333-7293365)
chr7 (280-312)||(11516544-11516576)
chr7 (280-312)||(13758677-13758709)
chr7 (280-312)||(14113903-14113935)
chr7 (280-312)||(15441478-15441510)
chr7 (280-312)||(15862226-15862258)
chr7 (280-312)||(15927875-15927907)
chr7 (280-312)||(16212071-16212103)
chr7 (280-312)||(18979938-18979970)
chr7 (280-312)||(30262043-30262075)
chr7 (280-312)||(36052971-36053003)
[»] scaffold0184 (1 HSPs)
scaffold0184 (31-360)||(31132-31462)
[»] scaffold0078 (2 HSPs)
scaffold0078 (31-360)||(41382-41712)
scaffold0078 (280-312)||(36980-37012)
[»] chr4 (44 HSPs)
chr4 (34-360)||(5682380-5682706)
chr4 (31-360)||(25119059-25119389)
chr4 (31-312)||(14951835-14952117)
chr4 (36-312)||(15272211-15272489)
chr4 (82-264)||(19559483-19559665)
chr4 (71-236)||(34177617-34177781)
chr4 (71-264)||(49071800-49071993)
chr4 (280-360)||(54118120-54118200)
chr4 (211-312)||(15135907-15136010)
chr4 (36-92)||(53704846-53704902)
chr4 (36-118)||(34395335-34395418)
chr4 (71-221)||(14500208-14500358)
chr4 (36-92)||(820029-820085)
chr4 (36-92)||(8872584-8872640)
chr4 (36-92)||(30457981-30458037)
chr4 (36-92)||(44055993-44056049)
chr4 (36-92)||(44346905-44346961)
chr4 (36-92)||(53907812-53907868)
chr4 (36-92)||(16732247-16732303)
chr4 (36-92)||(21959576-21959632)
chr4 (36-88)||(55376714-55376766)
chr4 (36-118)||(23270020-23270103)
chr4 (71-171)||(14996241-14996341)
chr4 (71-171)||(16522932-16523032)
chr4 (31-92)||(30232609-30232670)
chr4 (100-221)||(32460699-32460820)
chr4 (71-171)||(8045058-8045158)
chr4 (71-171)||(9295808-9295908)
chr4 (74-165)||(16225211-16225301)
chr4 (278-353)||(41165808-41165883)
chr4 (37-92)||(45458968-45459023)
chr4 (38-92)||(12837313-12837367)
chr4 (122-192)||(21417471-21417541)
chr4 (280-313)||(14996445-14996478)
chr4 (280-312)||(7131982-7132014)
chr4 (71-171)||(9795330-9795430)
chr4 (280-312)||(13246737-13246769)
chr4 (280-312)||(15287162-15287194)
chr4 (280-312)||(15294271-15294303)
chr4 (280-312)||(16327840-16327872)
chr4 (280-312)||(16609013-16609045)
chr4 (280-312)||(17145574-17145606)
chr4 (280-312)||(20001030-20001062)
chr4 (280-312)||(26680517-26680549)
[»] scaffold0034 (2 HSPs)
scaffold0034 (31-360)||(79937-80267)
scaffold0034 (31-92)||(46238-46299)
[»] chr2 (40 HSPs)
chr2 (31-360)||(22274795-22275125)
chr2 (36-360)||(22284033-22284358)
chr2 (36-312)||(9652796-9653073)
chr2 (36-258)||(21274004-21274226)
chr2 (71-360)||(15633327-15633617)
chr2 (71-311)||(25213162-25213403)
chr2 (280-360)||(20627190-20627270)
chr2 (74-236)||(7321633-7321795)
chr2 (280-360)||(19794581-19794661)
chr2 (280-360)||(43642833-43642913)
chr2 (36-118)||(23836791-23836874)
chr2 (36-118)||(25876006-25876088)
chr2 (71-221)||(28031230-28031380)
chr2 (36-92)||(32465936-32465992)
chr2 (36-118)||(6879515-6879597)
chr2 (118-235)||(20279571-20279688)
chr2 (48-171)||(33128135-33128258)
chr2 (36-92)||(271248-271304)
chr2 (71-171)||(24826760-24826860)
chr2 (71-155)||(17204445-17204529)
chr2 (36-92)||(25602102-25602158)
chr2 (36-92)||(36890798-36890854)
chr2 (275-316)||(19666843-19666884)
chr2 (280-313)||(19689314-19689347)
chr2 (296-353)||(43646232-43646289)
chr2 (280-312)||(463043-463075)
chr2 (280-312)||(3798520-3798552)
chr2 (36-92)||(4448246-4448302)
chr2 (280-312)||(8944153-8944185)
chr2 (280-312)||(12635785-12635817)
chr2 (280-312)||(12641559-12641591)
chr2 (280-312)||(12728699-12728731)
chr2 (280-312)||(14906354-14906386)
chr2 (280-312)||(16935900-16935932)
chr2 (280-312)||(17006560-17006592)
chr2 (280-312)||(22863235-22863267)
chr2 (280-312)||(23820388-23820420)
chr2 (36-92)||(28974127-28974183)
chr2 (280-312)||(36982364-36982396)
chr2 (280-312)||(42177886-42177918)
[»] scaffold0686 (2 HSPs)
scaffold0686 (31-354)||(5941-6265)
scaffold0686 (167-354)||(5735-5923)
[»] chr1 (19 HSPs)
chr1 (31-354)||(44034829-44035153)
chr1 (31-360)||(21860084-21860414)
chr1 (31-311)||(15861327-15861608)
chr1 (31-236)||(22367092-22367296)
chr1 (220-360)||(41218667-41218808)
chr1 (280-362)||(41394527-41394609)
chr1 (33-118)||(22403196-22403282)
chr1 (36-92)||(41212150-41212206)
chr1 (36-92)||(49967728-49967784)
chr1 (36-92)||(35522432-35522488)
chr1 (282-353)||(27675120-27675191)
chr1 (71-171)||(21650081-21650181)
chr1 (36-92)||(21718306-21718362)
chr1 (74-171)||(20254430-20254527)
chr1 (31-92)||(27329868-27329929)
chr1 (31-92)||(35054829-35054890)
chr1 (280-313)||(45051726-45051759)
chr1 (280-312)||(37844374-37844406)
chr1 (280-312)||(46523695-46523727)
[»] scaffold0016 (4 HSPs)
scaffold0016 (31-360)||(166116-166446)
scaffold0016 (31-354)||(162036-162360)
scaffold0016 (36-92)||(164293-164349)
scaffold0016 (278-353)||(116410-116485)
[»] chr8 (40 HSPs)
chr8 (36-360)||(274521-274846)
chr8 (36-360)||(641003-641328)
chr8 (36-360)||(826809-827134)
chr8 (38-360)||(24716714-24717037)
chr8 (31-360)||(39115348-39115678)
chr8 (31-312)||(41506709-41506991)
chr8 (51-312)||(24385652-24385914)
chr8 (72-222)||(22321437-22321587)
chr8 (36-171)||(16038923-16039058)
chr8 (74-312)||(21259391-21259630)
chr8 (71-264)||(17502274-17502467)
chr8 (71-264)||(4233968-4234161)
chr8 (71-264)||(23217990-23218183)
chr8 (280-360)||(16404852-16404932)
chr8 (36-118)||(22234890-22234972)
chr8 (47-118)||(19993141-19993212)
chr8 (36-92)||(41246736-41246792)
chr8 (36-118)||(37611746-37611829)
chr8 (81-221)||(21494452-21494592)
chr8 (118-235)||(18118259-18118376)
chr8 (74-171)||(22147555-22147652)
chr8 (36-92)||(20481683-20481739)
chr8 (36-96)||(20561740-20561800)
chr8 (36-92)||(20573305-20573361)
chr8 (36-96)||(20647938-20647998)
chr8 (36-92)||(20654018-20654074)
chr8 (71-171)||(22886440-22886540)
chr8 (72-171)||(2545061-2545160)
chr8 (74-171)||(18612523-18612620)
chr8 (74-171)||(18619428-18619525)
chr8 (71-171)||(3431322-3431422)
chr8 (278-312)||(31194217-31194251)
chr8 (280-312)||(5238404-5238436)
chr8 (280-312)||(13662182-13662214)
chr8 (280-312)||(13720845-13720877)
chr8 (280-312)||(16872968-16873000)
chr8 (280-312)||(22907128-22907160)
chr8 (280-312)||(24661162-24661194)
chr8 (280-312)||(43373392-43373424)
chr8 (280-312)||(43685863-43685895)
[»] chr3 (70 HSPs)
chr3 (36-360)||(3992628-3992953)
chr3 (31-360)||(45581704-45582034)
chr3 (31-360)||(7854055-7854385)
chr3 (31-360)||(54037976-54038306)
chr3 (36-360)||(2844269-2844594)
chr3 (31-360)||(17955832-17956166)
chr3 (31-312)||(30153015-30153297)
chr3 (31-311)||(54685202-54685483)
chr3 (36-312)||(53771119-53771397)
chr3 (36-312)||(23492451-23492728)
chr3 (94-360)||(55513006-55513273)
chr3 (36-312)||(16261531-16261809)
chr3 (31-312)||(33341954-33342236)
chr3 (36-312)||(38167992-38168269)
chr3 (58-312)||(28558271-28558526)
chr3 (71-264)||(18970034-18970227)
chr3 (71-236)||(48421690-48421855)
chr3 (74-345)||(15550714-15550986)
chr3 (280-360)||(19232089-19232169)
chr3 (280-355)||(15857120-15857195)
chr3 (280-362)||(16743991-16744073)
chr3 (36-92)||(16996172-16996228)
chr3 (36-92)||(317621-317677)
chr3 (36-92)||(50112164-50112220)
chr3 (36-118)||(22144358-22144441)
chr3 (71-221)||(19946812-19946962)
chr3 (38-118)||(6146832-6146913)
chr3 (36-116)||(6154419-6154500)
chr3 (36-97)||(34439451-34439512)
chr3 (36-92)||(12349843-12349899)
chr3 (36-92)||(13817590-13817646)
chr3 (36-92)||(19570801-19570857)
chr3 (36-118)||(53898541-53898624)
chr3 (36-92)||(12349652-12349708)
chr3 (118-206)||(14177017-14177105)
chr3 (36-92)||(17100731-17100787)
chr3 (36-92)||(17101416-17101472)
chr3 (36-92)||(54424090-54424146)
chr3 (71-155)||(8275902-8275986)
chr3 (71-171)||(9303141-9303241)
chr3 (71-171)||(14285075-14285175)
chr3 (36-92)||(14298499-14298555)
chr3 (36-92)||(14304126-14304182)
chr3 (71-171)||(16934015-16934115)
chr3 (114-258)||(17393590-17393735)
chr3 (36-92)||(19260952-19261008)
chr3 (36-92)||(35123774-35123830)
chr3 (36-118)||(16182032-16182114)
chr3 (37-92)||(17523002-17523057)
chr3 (71-155)||(8268802-8268886)
chr3 (120-264)||(11402752-11402896)
chr3 (278-353)||(38810868-38810943)
chr3 (118-208)||(12539066-12539156)
chr3 (275-353)||(13301323-13301401)
chr3 (275-353)||(13311979-13312057)
chr3 (280-313)||(15615137-15615170)
chr3 (296-353)||(17205019-17205076)
chr3 (71-112)||(39656453-39656494)
chr3 (275-312)||(51961031-51961068)
chr3 (280-312)||(2050115-2050147)
chr3 (280-312)||(2449152-2449184)
chr3 (280-312)||(8268650-8268682)
chr3 (280-312)||(8275750-8275782)
chr3 (280-312)||(14842487-14842519)
chr3 (280-312)||(16933869-16933901)
chr3 (280-312)||(17912398-17912430)
chr3 (280-312)||(18911300-18911332)
chr3 (280-312)||(19260749-19260781)
chr3 (137-208)||(37915290-37915361)
chr3 (70-118)||(38527841-38527889)
[»] scaffold0342 (1 HSPs)
scaffold0342 (31-360)||(304-633)
[»] chr5 (30 HSPs)
chr5 (31-311)||(11342758-11343039)
chr5 (31-312)||(2031883-2032165)
chr5 (36-264)||(21205004-21205232)
chr5 (36-312)||(21650773-21651050)
chr5 (71-312)||(16105757-16105999)
chr5 (83-235)||(22662653-22662805)
chr5 (71-236)||(25004929-25005094)
chr5 (36-118)||(21397170-21397253)
chr5 (281-355)||(11584374-11584448)
chr5 (36-92)||(4865341-4865397)
chr5 (36-118)||(21646826-21646908)
chr5 (36-92)||(1168317-1168373)
chr5 (36-118)||(24475658-24475738)
chr5 (36-92)||(28261599-28261655)
chr5 (71-171)||(7529014-7529114)
chr5 (36-92)||(20712154-20712210)
chr5 (74-171)||(17909622-17909719)
chr5 (71-171)||(9730424-9730524)
chr5 (36-92)||(24183245-24183301)
chr5 (31-92)||(11584124-11584188)
chr5 (36-92)||(11337299-11337355)
chr5 (36-92)||(21906795-21906851)
chr5 (71-171)||(108874-108974)
chr5 (280-312)||(7425631-7425663)
chr5 (280-312)||(20623286-20623318)
chr5 (280-312)||(21233442-21233474)
chr5 (280-312)||(23507270-23507302)
chr5 (280-312)||(25900320-25900352)
chr5 (280-312)||(35791015-35791047)
chr5 (280-312)||(37053061-37053093)
[»] scaffold0597 (1 HSPs)
scaffold0597 (36-312)||(878-1155)
[»] scaffold0032 (3 HSPs)
scaffold0032 (36-312)||(55659-55936)
scaffold0032 (210-312)||(108075-108179)
scaffold0032 (275-353)||(104477-104555)
[»] scaffold0251 (2 HSPs)
scaffold0251 (36-312)||(13285-13563)
scaffold0251 (36-141)||(21432-21537)
[»] scaffold0116 (1 HSPs)
scaffold0116 (31-360)||(30164-30497)
[»] scaffold0706 (1 HSPs)
scaffold0706 (36-312)||(6443-6720)
[»] scaffold0234 (1 HSPs)
scaffold0234 (36-312)||(17304-17581)
[»] scaffold0039 (2 HSPs)
scaffold0039 (31-312)||(12418-12702)
scaffold0039 (31-65)||(19049-19083)
[»] scaffold0004 (2 HSPs)
scaffold0004 (36-313)||(193396-193664)
scaffold0004 (36-173)||(186566-186702)
[»] scaffold0175 (2 HSPs)
scaffold0175 (36-245)||(15027-15236)
scaffold0175 (280-312)||(882-914)
[»] scaffold0303 (2 HSPs)
scaffold0303 (67-312)||(4346-4593)
scaffold0303 (36-236)||(5-205)
[»] scaffold0465 (1 HSPs)
scaffold0465 (31-312)||(9882-10148)
[»] scaffold0132 (1 HSPs)
scaffold0132 (179-360)||(42575-42754)
[»] scaffold0028 (2 HSPs)
scaffold0028 (71-311)||(130670-130911)
scaffold0028 (37-96)||(89578-89637)
[»] scaffold0574 (1 HSPs)
scaffold0574 (36-155)||(9565-9684)
[»] scaffold0063 (1 HSPs)
scaffold0063 (48-256)||(44071-44279)
[»] scaffold1295 (1 HSPs)
scaffold1295 (71-236)||(219-384)
[»] scaffold0507 (1 HSPs)
scaffold0507 (71-345)||(1371-1643)
[»] scaffold0037 (2 HSPs)
scaffold0037 (36-171)||(95053-95192)
scaffold0037 (36-92)||(24841-24897)
[»] scaffold0079 (1 HSPs)
scaffold0079 (73-264)||(3786-3981)
[»] scaffold0057 (1 HSPs)
scaffold0057 (71-208)||(5996-6133)
[»] scaffold1164 (1 HSPs)
scaffold1164 (281-360)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (281-360)||(19802-19881)
scaffold0122 (281-360)||(24106-24185)
[»] scaffold0091 (2 HSPs)
scaffold0091 (36-118)||(32281-32363)
scaffold0091 (36-118)||(41940-42022)
[»] scaffold0083 (1 HSPs)
scaffold0083 (36-118)||(14952-15034)
[»] scaffold0077 (3 HSPs)
scaffold0077 (281-360)||(15319-15398)
scaffold0077 (36-92)||(15584-15640)
scaffold0077 (280-313)||(36836-36869)
[»] scaffold0673 (2 HSPs)
scaffold0673 (36-118)||(6932-7014)
scaffold0673 (36-92)||(935-991)
[»] scaffold0049 (1 HSPs)
scaffold0049 (281-360)||(20493-20572)
[»] scaffold0011 (2 HSPs)
scaffold0011 (36-118)||(254900-254983)
scaffold0011 (36-118)||(261506-261589)
[»] scaffold0876 (1 HSPs)
scaffold0876 (281-351)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (281-355)||(6261-6335)
scaffold0310 (281-318)||(4-41)
[»] scaffold0207 (1 HSPs)
scaffold0207 (71-221)||(17812-17962)
[»] scaffold0480 (1 HSPs)
scaffold0480 (36-92)||(5359-5415)
[»] scaffold0021 (2 HSPs)
scaffold0021 (36-92)||(132363-132419)
scaffold0021 (36-92)||(88353-88409)
[»] scaffold0396 (1 HSPs)
scaffold0396 (36-92)||(11821-11877)
[»] scaffold0044 (1 HSPs)
scaffold0044 (36-92)||(38376-38432)
[»] scaffold0025 (2 HSPs)
scaffold0025 (36-92)||(146679-146735)
scaffold0025 (280-312)||(146906-146938)
[»] scaffold0008 (2 HSPs)
scaffold0008 (36-92)||(22769-22825)
scaffold0008 (280-312)||(128095-128127)
[»] scaffold0001 (5 HSPs)
scaffold0001 (36-92)||(70735-70791)
scaffold0001 (71-171)||(165007-165107)
scaffold0001 (36-85)||(60884-60933)
scaffold0001 (280-312)||(172210-172242)
scaffold0001 (280-312)||(177913-177945)
[»] scaffold0740 (1 HSPs)
scaffold0740 (36-118)||(4363-4445)
[»] scaffold0359 (2 HSPs)
scaffold0359 (36-118)||(11740-11823)
scaffold0359 (36-92)||(1395-1451)
[»] scaffold0120 (2 HSPs)
scaffold0120 (34-92)||(21588-21646)
scaffold0120 (39-92)||(31292-31345)
[»] scaffold1867 (1 HSPs)
scaffold1867 (36-92)||(222-278)
[»] scaffold0335 (1 HSPs)
scaffold0335 (71-171)||(5622-5722)
[»] scaffold0240 (1 HSPs)
scaffold0240 (36-92)||(7647-7703)
[»] scaffold0190 (1 HSPs)
scaffold0190 (36-92)||(10015-10071)
[»] scaffold0118 (1 HSPs)
scaffold0118 (71-171)||(34454-34554)
[»] scaffold0023 (3 HSPs)
scaffold0023 (48-171)||(61268-61391)
scaffold0023 (280-312)||(48903-48935)
scaffold0023 (280-312)||(153924-153956)
[»] scaffold0014 (2 HSPs)
scaffold0014 (36-92)||(85410-85466)
scaffold0014 (36-96)||(159377-159438)
[»] scaffold0173 (1 HSPs)
scaffold0173 (74-221)||(5338-5485)
[»] scaffold0068 (2 HSPs)
scaffold0068 (36-97)||(48225-48286)
scaffold0068 (36-97)||(61673-61734)
[»] scaffold0610 (1 HSPs)
scaffold0610 (36-92)||(689-745)
[»] scaffold0367 (1 HSPs)
scaffold0367 (48-171)||(17355-17478)
[»] scaffold0195 (1 HSPs)
scaffold0195 (36-92)||(631-687)
[»] scaffold0162 (2 HSPs)
scaffold0162 (75-171)||(11862-11958)
scaffold0162 (280-312)||(26340-26372)
[»] scaffold0035 (2 HSPs)
scaffold0035 (36-92)||(118076-118132)
scaffold0035 (36-85)||(109582-109631)
[»] scaffold0029 (1 HSPs)
scaffold0029 (71-171)||(49889-49989)
[»] scaffold0012 (2 HSPs)
scaffold0012 (36-92)||(253102-253158)
scaffold0012 (280-312)||(247366-247398)
[»] scaffold0615 (1 HSPs)
scaffold0615 (71-171)||(6257-6357)
[»] scaffold0338 (1 HSPs)
scaffold0338 (40-92)||(9069-9121)
[»] scaffold0160 (1 HSPs)
scaffold0160 (36-92)||(99-155)
[»] scaffold0158 (2 HSPs)
scaffold0158 (40-92)||(25040-25092)
scaffold0158 (40-92)||(25293-25345)
[»] scaffold0117 (1 HSPs)
scaffold0117 (36-92)||(11681-11737)
[»] scaffold0103 (1 HSPs)
scaffold0103 (36-96)||(33740-33800)
[»] scaffold0075 (1 HSPs)
scaffold0075 (36-92)||(5019-5075)
[»] scaffold0022 (1 HSPs)
scaffold0022 (36-92)||(112658-112714)
[»] scaffold0413 (1 HSPs)
scaffold0413 (278-312)||(5990-6024)
[»] scaffold0058 (1 HSPs)
scaffold0058 (278-312)||(57392-57426)
[»] scaffold0317 (1 HSPs)
scaffold0317 (74-171)||(12637-12734)
[»] scaffold0031 (1 HSPs)
scaffold0031 (36-92)||(70691-70748)
[»] scaffold0013 (1 HSPs)
scaffold0013 (296-353)||(35816-35873)
[»] scaffold1500 (1 HSPs)
scaffold1500 (280-312)||(1431-1463)
[»] scaffold0761 (1 HSPs)
scaffold0761 (280-312)||(1492-1524)
[»] scaffold0498 (1 HSPs)
scaffold0498 (280-312)||(9183-9215)
[»] scaffold0383 (1 HSPs)
scaffold0383 (280-312)||(2700-2732)
[»] scaffold0302 (1 HSPs)
scaffold0302 (280-312)||(12418-12450)
[»] scaffold0266 (1 HSPs)
scaffold0266 (280-312)||(1430-1462)
[»] scaffold0141 (2 HSPs)
scaffold0141 (280-312)||(22857-22889)
scaffold0141 (280-312)||(27112-27144)
[»] scaffold0124 (1 HSPs)
scaffold0124 (280-312)||(1496-1528)
[»] scaffold0009 (1 HSPs)
scaffold0009 (280-312)||(272330-272362)


Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 35015339 - 35015009
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015339 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 35015240  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35015239 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 35015140  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015139 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 35015040  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  35015039 gctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 38 - 360
Target Start/End: Complemental strand, 19983466 - 19983144
Alignment:
Q  38 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttga 137  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||||||| |    
T  19983466 catgaaacatatcacaattcatcaacaatcatgcataattcactaattgagcatagtttt-aaactacccattttcatacatcatgaacttgcaatttca 19983368  T
Q  138 tcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattct 237  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  19983367 tcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattggattcatgataatcacttattct 19983268  T
Q  238 cataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctag 336  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983267 cataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctag 19983168  T
Q  337 cttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||| ||||    
T  19983167 cttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 36 - 360
Target Start/End: Original strand, 18583395 - 18583720
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18583395 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 18583494  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18583495 catcatcaacaattcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 18583594  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    | |||||||||| |||||||||||| |||        ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||     
T  18583595 cccataatcaatgatgcatagaacaggagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatcaccaactattaactca 18583694  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||| ||||    
T  18583695 agcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 26089813 - 26090091
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26089813 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacattatgaacttgcaattt 26089912  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26089913 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 26090012  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||  |||||||||||||||| ||||||||||||||||||    
T  26090013 ctcataatcaattatgcatagaatcaagagaaaaagaattaatcaaatgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 18002673 - 18002395
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18002673 atcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 18002574  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  18002573 catcatcaacaattcatttaacatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatg 18002474  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    | ||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  18002473 cccataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 23995001 - 23995279
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23995001 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 23995100  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  23995101 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaattccaaatattgggttcatgataatcacttatt 23995200  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  23995201 ctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 15742397 - 15742120
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  15742397 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatatacaaattacccattttcatacatcatgaacttgcaattt 15742298  T
Q  136 gatcatcaacaattcatttaa-catcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttat 234  Q
     |||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15742297 catcatcaacaattcatttaatcatcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttat 15742198  T
Q  235 tctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||||||| |||||||||        ||||| ||| |||||||||||| ||||||||||||||||||    
T  15742197 tctcataatcaattatgcat-gaacaagagaaaaagaattaaccaaaggattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 311
Target Start/End: Original strand, 4991186 - 4991427
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||| ||||||||| |||||||||||||||||| |||||    
T  4991186 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaaat-aacat 4991284  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnn 268  Q
    ||  ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||         
T  4991285 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataaaatcaagagaaaaa 4991384  T
Q  269 nnnttaactaaatgattatgataaaaactaacccccttacctt 311  Q
       ||||  |||||||||||||||| |||||||||||||||||    
T  4991385 gaattaaacaaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 48 - 264
Target Start/End: Complemental strand, 22585711 - 22585495
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||| ||||||| ||| ||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||||||    
T  22585711 atcacaattcaacaacaac-atgtcataattcttcaattgagcataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 22585613  T
Q  147 attcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 246  Q
    ||||| ||| ||||||||||| ||| | ||| ||||| |||||||||  |||||||||||||||||||||||||  ||||||||||||||  |||| ||     
T  22585612 attcaattatcatcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcac 22585513  T
Q  247 ttatgcatagaacaagag 264  Q
    |||||||||||| |||||    
T  22585512 ttatgcatagaaaaagag 22585495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 48 - 264
Target Start/End: Complemental strand, 22590542 - 22590326
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||| ||||||| ||| ||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||||||    
T  22590542 atcacaattcaacaacaac-atgtcataattcttcaattgagcataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 22590444  T
Q  147 attcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 246  Q
    ||||| ||| ||||||||||| ||| | ||| ||||| |||||||||  |||||||||||||||||||||||||  ||||||||||||||  |||| ||     
T  22590443 attcaattatcatcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcac 22590344  T
Q  247 ttatgcatagaacaagag 264  Q
    |||||||||||| |||||    
T  22590343 ttatgcatagaaaaagag 22590326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 48 - 316
Target Start/End: Complemental strand, 15889871 - 15889601
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||||||||||| ||| ||||||||| || |||| ||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||||||    
T  15889871 atcacaattcatcaacaac-atgtcataattcatcagttgaacataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 15889773  T
Q  147 attcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 246  Q
    | ||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||| |||||||||  |||||||| |||||  |||| ||     
T  15889772 aatcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacac 15889673  T
Q  247 ttatgcatagaacaagag-nnnnnnnttaactaaatgattatga-taaaaactaacccccttaccttaatta 316  Q
    |||||||||||| |||||        |||||||| ||||||||| | ||| ||||||||||||||| |||||    
T  15889672 ttatgcatagaaaaagagagaagaaattaactaagtgattatgattgaaatctaacccccttacctcaatta 15889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 47 - 264
Target Start/End: Complemental strand, 15005072 - 15004856
Alignment:
Q  47 tatcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaac 145  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||| ||||||| |||||||||||||||  ||||||||| ||| ||||||||  ||||||||    
T  15005072 tatcacaattcaacaacaac-atgtcataattcatcaattgaacataattcacaaactacccatttatatacatcataaacatgcaatttcctcatcaac 15004974  T
Q  146 aattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatca 245  Q
    |||||| | ||||||||||| ||||| | ||| ||||| |||||||||  |||||||||||||||||||||||||  |||||| |||||||  |||| ||    
T  15004973 aattcaatcaacatcaaatt-acatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagca 15004875  T
Q  246 attatgcatagaacaagag 264  Q
     |||||||||||| |||||    
T  15004874 cttatgcatagaaaaagag 15004856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 264
Target Start/End: Complemental strand, 25640694 - 25640505
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||| |||||||||| |||| |||||||||||||||   |||||||||||| |||||||| |||||||| |||||| ||| ||||||||||||||| |    
T  25640694 aattcatcaattgagcacaattcacaaactacccatttatctacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 25640595  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
     ||| ||||| |||||||||  ||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  25640594 caaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 25640505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 32276902 - 32276756
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||| |    
T  32276902 aattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 32276803  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttca 220  Q
     |||  |||| | | ||||   ||||||| |||||||||||||||||    
T  32276802 caaacttatcaccaaaacaagagcacgaaattcaaagattgggttca 32276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 13014874 - 13014822
Alignment:
Q  40 tgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  13014874 tgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 13014822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 32898868 - 32898924
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  32898868 atcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 32898924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 25744382 - 25744331
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  25744382 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 18570357 - 18570413
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  18570357 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 18570413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 22441012 - 22441068
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||    
T  22441012 atcatgaaacttatcacaaatcatgaacaacaatgcataattcaccaattgagcata 22441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 18777219 - 18777280
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||| |||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  18777219 cattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacata 18777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 19629447 - 19629544
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  19629447 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 19629544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 18432721 - 18432777
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  18432721 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 18432777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 31628346 - 31628402
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  31628346 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 31628402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 26512260 - 26512349
Alignment:
Q  76 ttcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaatt 165  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||| ||| || ||||| | || ||||||||||  || |||||||||    
T  26512260 ttcatcaattgagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaatt 26512349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 26517376 - 26517465
Alignment:
Q  76 ttcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaatt 165  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||| ||| || ||||| | || ||||||||||  || |||||||||    
T  26517376 ttcatcaattgagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaatt 26517465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 16106594 - 16106650
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | | |||||||||||||| ||||||    
T  16106594 atcatgaaacttatcacaattcaacaacaacaaggtataattcaccaattaagcata 16106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 16300122 - 16300022
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||| | |||||  |||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  16300122 cataatttatcaattaggcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16300023  T
Q  171 a 171  Q
    |    
T  16300022 a 16300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 18823529 - 18823429
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||| ||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  18823529 cataagtcatcaattaagcataacttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 18823430  T
Q  171 a 171  Q
    |    
T  18823429 a 18823429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 18839384 - 18839300
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcattta 155  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| ||||||||||||||    
T  18839384 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcattta 18839300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaa 313  Q
    |||||||||||||| |||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  296 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 16086095 - 16086151
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||| |||||| ||||||| | | |||||||||||||| ||||||    
T  16086095 atcatgaaacttatcataattcaacaacaacaaggtataattcaccaattaagcata 16086151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 16232199 - 16232231
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  16232199 atgattatgataataactaacccccttacctta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 19610325 - 19610357
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  19610325 atgattatgataataactaacccccttacctta 19610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 32494228 - 32493898
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494228 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 32494129  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  32494128 aatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctacaacataaacacgaatttcaaagattgggttcatgataatcac 32494029  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494028 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 32493929  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  32493928 gctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 126488 - 126818
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126488 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 126587  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  126588 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctgcaacataagcacgaatttcaaagattgggttcatgataatcac 126687  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126688 ttattctcataatcaattatgcatagaacaatagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 126787  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||| ||||| ||||||||||||| ||||    
T  126788 gctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 111451 - 111121
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111451 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 111352  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111351 aatttcatcatcaaccattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaatattgggttcatgataatcac 111252  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||| ||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||    
T  111251 ttattttcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatcaccaactttta 111152  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||| ||||||||||||||||||||| ||||    
T  111151 gctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 48 - 360
Target Start/End: Complemental strand, 1937177 - 1936869
Alignment:
Q  48 atcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaa 147  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||| ||||| |||||    
T  1937177 atcataattcatcaacaaccatacataattcaccaattgagcataatttacaaactacccatttt-----atcatgaacttgcaatttcatcatgaacaa 1937083  T
Q  148 ttcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaat 247  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1937082 ttcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaat 1936983  T
Q  248 tatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttt 346  Q
    |||||||||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  1936982 tatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcactttt 1936883  T
Q  347 gctcctatgcttct 360  Q
    ||| ||||| ||||    
T  1936882 gcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 2028999 - 2029276
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2028999 atcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacccattttcgtacatcatgaacttgcaattt 2029098  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2029099 catcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 2029198  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  2029199 ctcataatcaattatgcatagaacaagagaaaaaaaattaactaaatgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 42056466 - 42056188
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42056466 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattcacaaactacccattttcatacatcatgaacttgcaattt 42056367  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42056366 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 42056267  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  42056266 ctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 2190363 - 2190085
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2190363 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactatccattttcatacatcatgaacttgcaattt 2190264  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  2190263 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtacatgataatcacttatt 2190164  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||| |||||||||||||||||||||||| ||||||||||    
T  2190163 ctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaaaactaaccgccttacctta 2190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 3049661 - 3049937
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3049661 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcataatttacaaactacccatattcatacatcatgaacttgcaattt 3049760  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  3049761 catcatcc-caattcatttaacatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaagattgggttcatgataatcacttatt 3049859  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  3049860 ctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 74 - 264
Target Start/End: Complemental strand, 39291648 - 39291458
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||| |    
T  39291648 aattcaccaattgagcataattcacaaactacccatttatatacatcatcaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatact 39291549  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
     ||| ||||| |||||||||  ||||||||||||||  || ||||||  ||||||||||||||  ||||  | |||||||||||| |||||    
T  39291548 caaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatagaaaaagag 39291458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 15516896 - 15516765
Alignment:
Q  179 atatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaac 276  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        |||||    
T  15516896 atatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaac 15516797  T
Q  277 taaatgattatgataaaaactaacccccttac 308  Q
     |||||||||||||||| ||||||||||||||    
T  15516796 caaatgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 13352065 - 13352258
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||||||||||||| | | |||||||||||  ||||||||||||| |||||||| | ||||||||| |||  || ||||||||||||||    
T  13352065 cataattcatcaattgagcataattaaaatactacccatttatatacatcatgaacatgcaatttcaccatcaacaaatcaaatatcatcaaattaacat 13352164  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | | ||| ||||| |||||||||  ||||||||||||| | |||||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  13352165 actgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatagaaaaagag 13352258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 3060271 - 3060344
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3060271 atgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 44865304 - 44865391
Alignment:
Q  32 attaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  44865304 attaatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 44865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 39046792 - 39046740
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39046792 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 39046740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 143717 - 143800
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  143717 atcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacatacccattttcataca 143800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 47289859 - 47289942
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  47289859 atcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacatacccattttcataca 47289942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 234
Target Start/End: Complemental strand, 15978004 - 15977820
Alignment:
Q  50 cacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaat 148  Q
    ||||||||| ||||||| ||| ||||||||| || ||||| |||||| |  || || |||| |  ||||| ||||||| |||||||| |||||||| |||    
T  15978004 cacaattcaacaacaac-atgtcataattcatcatttgagtataattcatcaagtatccatatatatacaccatgaacatgcaatttcatcatcaataat 15977906  T
Q  149 tcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaaagattgggttcatgataatcacttat 234  Q
    ||| ||| || |||||||||||| | ||| ||||| ||||||| ||| ||| |||||||||| |||  |||||| ||||||||||||    
T  15977905 tcaattatcaacaaattaacatactcaaacatatcactacaac-tagagcatgaatttcaaacatttagttcataataatcacttat 15977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 35094889 - 35094974
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcata 116  Q
    |||| |||||||||||| | ||||||||||||||||  |||||||||||||||||||||||| ||| ||| | ||||||||||||||    
T  35094889 cattgatcatgaaacatttaacaattcatcaacaacagtgcataattcaccaattgagcatattttcacaca-tacccattttcata 35094974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 3895103 - 3895159
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  3895103 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 3895159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 11287495 - 11287551
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  11287495 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 11287551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 12370013 - 12369953
Alignment:
Q  32 attaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||||  |||||||||||| ||||||| | |||||||||||||||||||||||    
T  12370013 attaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgagcata 12369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 371203 - 371303
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  371203 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 371302  T
Q  171 a 171  Q
    |    
T  371303 a 371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 15822600 - 15822544
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | ||||||||||||| |||||||||    
T  15822600 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccatttgagcata 15822544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 13377849 - 13377924
Alignment:
Q  278 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||| ||  ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  13377849 aaatgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 7284229 - 7284173
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | | |||||||||||||| ||||||    
T  7284229 atcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattaagcata 7284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 12759065 - 12759121
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||| |||||| |||||||   |||||||||||||||||||||||    
T  12759065 atcatgaaacttatcataattcaccaacaacatagcataattcaccaattgagcata 12759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 18151379 - 18151259
Alignment:
Q  138 tcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattct 237  Q
    |||||||||||||| ||| || ||||||||||||   ||  ||||| |||||||||  ||||||||||||| | ||  |||||  ||||||||||||||     
T  18151379 tcatcaacaattcaattatcaacaaattaacatacctaatcatatcactacaacatgagcacgaatttcaacggttaagttcacaataatcacttattca 18151280  T
Q  238 cataatcaattatgcatagaa 258  Q
     ||||  | ||||||||||||    
T  18151279 aataagaatttatgcatagaa 18151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 26070433 - 26070377
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||| ||||||    
T  26070433 atcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcata 26070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 26094220 - 26094164
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||| ||||||    
T  26094220 atcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcata 26094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  296 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 17223846 - 17223797
Alignment:
Q  296 ctaacccccttaccttaattatctccaactattagctctagcttcacttt 345  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcacttt 17223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 25124445 - 25124482
Alignment:
Q  275 actaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25124445 actaaatgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 13758677 - 13758709
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttacctta 13758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 15862226 - 15862258
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  15862226 atgattatgataataactaacccccttacctta 15862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 15927875 - 15927907
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  15927875 atgattatgataataactaacccccttacctta 15927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 16212071 - 16212103
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  16212071 atgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 18979970 - 18979938
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  18979970 atgattatgataataactaacccccttacctta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 36052971 - 36053003
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  36052971 atgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 31462 - 31132
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31462 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 31363  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  31362 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcac 31263  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31262 ttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttaccttaattatctccaactatta 31163  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  31162 gctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 266; Significance: 1e-148; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 41382 - 41712
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41382 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 41481  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  41482 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcac 41581  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41582 ttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttaccttaattatctccaactatta 41681  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  41682 gctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 34 - 360
Target Start/End: Complemental strand, 5682706 - 5682380
Alignment:
Q  34 taatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5682706 taatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccaatttcatacatcatgaacttgcaat 5682607  T
Q  134 ttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcactta 233  Q
    || ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  5682606 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcactta 5682507  T
Q  234 ttctcataatcaattatgcatagaacaagagnnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctc 333  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  5682506 ttctcataatcaattatgcatagaacaagaggaaaaaattaactaaatgattatgataaaaactaacccacttaccttaattatcaccaactattagctc 5682407  T
Q  334 tagcttcacttttgctcctatgcttct 360  Q
      |||||||||||||||||||| ||||    
T  5682406 atgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 25119389 - 25119059
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  25119389 cattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcataatttacaaactatccattttcatacatcatgaacttgc 25119290  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||  |||||||||||||||||||||||    
T  25119289 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaattttcaagattgggttcatgataatcac 25119190  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25119189 ttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaactaactcccttaccttaattatctccaactatta 25119090  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  25119089 gctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 31 - 312
Target Start/End: Original strand, 14951835 - 14952117
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14951835 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 14951934  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14951935 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 14952034  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  14952035 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 15272489 - 15272211
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272489 atcatggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 15272390  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| |||| |||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15272389 catcatcaaccattcgtttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 15272290  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  15272289 ctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 264
Target Start/End: Original strand, 19559483 - 19559665
Alignment:
Q  82 aattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatata 181  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||  | ||| |||    
T  19559483 aattgagcataattcacaaactacccatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaacatcaaattaacatgctcaaacata 19559582  T
Q  182 tctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    || |||||||||  ||| ||||||||||  |||||| ||| ||||||||||||||  |||| || |||||||||||| |||||    
T  19559583 tcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcatagaaaaagag 19559665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 34177781 - 34177617
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||||||||||| |||||||  ||| ||||||||||  ||||||||||||| |||||||| ||||||||||||||| ||| |||  |||||||||    
T  34177781 cataattcaccaattgaacataattctcaa-ctacccatttatatacatcatgaacatgcaattttatcatcaacaattcaattatcatgtaattaacat 34177683  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattc 236  Q
    | | ||| ||||| |||||||||  ||||||||||  |||||||| ||||  ||||||||||||||    
T  34177682 actcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 49071800 - 49071993
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| |||||||||||| || |  || ||  ||| | |||| ||||||||| |||||||| |||||||| |||||| ||||||||||||||||||    
T  49071800 cataattcatcaattgagcatatttcatcaagtattcatatacatatatcatgaacatgcaatttcatcatcaataattcaattaacatcaaattaacat 49071899  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | | ||| ||||| |||||| ||  ||||||||||||| | |||||||||  || |||||||||||  |||| || |||||||||||| |||||    
T  49071900 actcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcatagaaaaagag 49071993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 54118200 - 54118120
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  54118200 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 15136010 - 15135907
Alignment:
Q  211 attgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttac 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  309 ctta 312  Q
    ||||    
T  15135910 ctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 53704902 - 53704846
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53704902 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 53704846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 34395335 - 34395418
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  34395335 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 34395418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 14500358 - 14500208
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  |||| |||| ||| |||||||||| ||| ||||||||||    
T  14500358 cataattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaataattcatttatcattaaattaacat 14500259  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcat 221  Q
    | | |||  |||| | | ||||   ||||||| ||||||||||||||||||    
T  14500258 actcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 820085 - 820029
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  820085 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 820029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 8872640 - 8872584
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  8872640 atcatgaaacatatcacaattcatcaacaacaacgcataattcaccaattgagcata 8872584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 30457981 - 30458037
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  30457981 atcatgaaacttatcacaattcatcaacaacaatgcgtaattcaccaattgagcata 30458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 44055993 - 44056049
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  44055993 atcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 44056049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 44346905 - 44346961
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  44346905 atcatgaaacatatcacaattcatgaacaacaatgtataattcaccaattgagcata 44346961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 53907868 - 53907812
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  53907868 atcatgaaacatttcacaattcatcaacaacaatgcataattcaccaattgggcata 53907812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 16732247 - 16732303
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  16732247 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 16732303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 21959632 - 21959576
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  21959632 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 21959576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 55376766 - 55376714
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 88  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  55376766 atcatgaaacttatcacaattcatcaacaacaatgtataattcaccaattgag 55376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 23270103 - 23270020
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    ||||||| || |||||||||||||||||||| |||||||||||| |||||||| ||| |||  | || ||||||||||||||||    
T  23270103 atcatgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtatattttcaacacatacccattttcataca 23270020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 14996241 - 14996341
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| ||||||||| |||| |||  |||||||||    
T  14996241 cataattcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcttttatcattcaattaacat 14996340  T
Q  171 a 171  Q
    |    
T  14996341 a 14996341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 16522932 - 16523032
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  16522932 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16523031  T
Q  171 a 171  Q
    |    
T  16523032 a 16523032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 30232670 - 30232609
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||| |||||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  30232670 cattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 30232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 32460820 - 32460699
Alignment:
Q  100 aactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcac 199  Q
    |||||||| ||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||| | |||  |||  | | ||||   ||||    
T  32460820 aactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaattataaccaaaacaagagcac 32460721  T
Q  200 gaatttcaaagattgggttcat 221  Q
    ||| ||||||||||||||||||    
T  32460720 gaaattcaaagattgggttcat 32460699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 8045058 - 8045158
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| ||||||| |||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  8045058 cataagtcatcaattaagcataatttcacaacaacccattctcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 8045157  T
Q  171 a 171  Q
    |    
T  8045158 a 8045158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 9295808 - 9295908
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| || | |||||||||||||| |||  |||||||||    
T  9295808 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcattaccaacaattcatttatcattcaattaacat 9295907  T
Q  171 a 171  Q
    |    
T  9295908 a 9295908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 16225301 - 16225211
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaatt 165  Q
    |||||| ||||||||||||||| |||||||||||||||  |||  |||||||| || ||||| | || ||||||||||  || |||||||||    
T  16225301 aattcatcaattgagcataattcacaaactacccatttatata-ttcatgaacatgtaatttaaacaacaacaattcaaataccatcaaatt 16225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 41165883 - 41165808
Alignment:
Q  278 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||| ||  ||||||||||||| ||||||||| |||| |  |||| | ||||||||||| |||||||    
T  41165883 aaatgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 45459023 - 45458968
Alignment:
Q  37 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||| |||||||||||| ||||| | | |||||||||||||||||| ||||    
T  45459023 tcatgaaacttatcacaattcaacaacagcaaagcataattcaccaattgaacata 45458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 12837367 - 12837313
Alignment:
Q  38 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  12837367 catgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 12837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 21417471 - 21417541
Alignment:
Q  122 tgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaaca 192  Q
    ||||| || ||||| ||||||||||||||| ||| || |||||| ||||||| ||| ||||||||| ||||    
T  21417471 tgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacatatctctaaaaca 21417541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 14996445 - 14996478
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaa 313  Q
    ||||||||||||| ||||||||||||||||||||    
T  14996445 atgattatgataataactaacccccttaccttaa 14996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 7132014 - 7131982
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  7132014 atgattatgataataactaacccccttacctta 7131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 9795330 - 9795430
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||||||||| | ||||||||   |||||| |||||| | |||| |||||| ||  |||| |||| ||| |||||||||| |||  |||||||||    
T  9795330 cataattcaccaattaaacataatttcacaactactcattttgacacattatgaacatgttatttcatcaccaagaattcatttatcattcaattaacat 9795429  T
Q  171 a 171  Q
    |    
T  9795430 a 9795430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 13246737 - 13246769
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  13246737 atgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 15287194 - 15287162
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  15287194 atgattatgataataactaacccccttacctta 15287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 15294303 - 15294271
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  15294303 atgattatgataataactaacccccttacctta 15294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 17145606 - 17145574
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  17145606 atgattatgataataactaacccccttacctta 17145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 20001030 - 20001062
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttacctta 20001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 258; Significance: 1e-143; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 79937 - 80267
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79937 cattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 80036  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  80037 aatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctaccacataagcacaaatttcaaagattgggttcatgataatcac 80136  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  80137 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatctccaactatta 80236  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||| ||||||||||||||||||||| ||||    
T  80237 gctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 46238 - 46299
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||| |||||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  46238 cattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 46299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 22274795 - 22275125
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22274795 cattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaacaacccattttcatacatcatgaacttgc 22274894  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  22274895 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcac 22274994  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  22274995 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaggctaacccccttaccttaattatctccaactatta 22275094  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  22275095 gctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 36 - 360
Target Start/End: Original strand, 22284033 - 22284358
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  22284033 atcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatttactaactattcattttcatacatcatgaacttgcaattt 22284132  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  22284133 catcatcaacaattcatttaacattaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgagttcatgataatcacttatt 22284232  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    ||||||||||| |||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22284233 ctcataatcaaatatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatctccaactattagctct 22284332  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    | ||||||||||||||||||| ||||    
T  22284333 aacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 9653073 - 9652796
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9653073 atcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgagtataatttacaaactacccattttcatacatcatgaacttgcaattt 9652974  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9652973 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgggttcatgataatcacttatt 9652874  T
Q  236 ctcataatcaattatgcatagaacaag-agnnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    | ||||||||||||||||||||||||| |        ||||| |||||||||||||||| ||||||||||||||||||    
T  9652873 cccataatcaattatgcatagaacaagaaaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 36 - 258
Target Start/End: Complemental strand, 21274226 - 21274004
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21274226 atcatgaaacatattacaattcatcaacaaccatgcataattcaccaattgagtataatttacaaactacccattttcatacatcatgaacttgcaattt 21274127  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21274126 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 21274027  T
Q  236 ctcataatcaattatgcatagaa 258  Q
    |||||||||||||||||||||||    
T  21274026 ctcataatcaattatgcatagaa 21274004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 71 - 360
Target Start/End: Original strand, 15633327 - 15633617
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  15633327 cataattcatcaattaagcataatttcacaactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 15633426  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnn 270  Q
    | | |||  |||| | | ||||   ||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||          
T  15633427 actcaaacttatcaccaaaacaagagcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaagagaaaaag 15633526  T
Q  271 n-ttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
      |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15633527 aattaactaagtgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 71 - 311
Target Start/End: Original strand, 25213162 - 25213403
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||| ||||||||| |||||||||||||||| |||||||    
T  25213162 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacat 25213260  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnn 268  Q
    ||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  25213261 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 25213360  T
Q  269 nnnttaactaaatgattatgataaaaactaacccccttacctt 311  Q
       ||||  |||||||||||||||| |||||||||||||||||    
T  25213361 gaattaatcaaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 20627270 - 20627190
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20627270 atgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 7321633 - 7321795
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||| ||| || ||||| ||||| || |||||| ||| ||||||||||||||| |    
T  7321633 aattcatcaattgagcacaattcacaaactacccatttatatacatcataaacatgaaatttcatcataaaaaattcaattatcatcaaattaacatact 7321732  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattc 236  Q
     ||| ||||| |||||||||  ||||||||||||||  |||||||||  ||| ||||||||||    
T  7321733 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattc 7321795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 19794661 - 19794581
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  19794661 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 43642913 - 43642833
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43642913 atgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 23836874 - 23836791
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  23836874 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttttcacacatacccattttcataca 23836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 25876088 - 25876006
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  25876088 atcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttcataca 25876006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 28031380 - 28031230
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  |||| |||| |||||||||||||| ||   |||||||||    
T  28031380 cataattcatcaattaagcataatttcacaactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacat 28031281  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcat 221  Q
    | |||||  |||| | | ||||   ||||||| ||||||||||||||||||    
T  28031280 actaaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 28031230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 32465936 - 32465992
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  32465936 atcatgaaacttatcacaattcatcaagaacaatgcataattcaccaattgagcata 32465992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 6879515 - 6879597
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| ||| | ||||||||||||||||    
T  6879515 atcattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtatattttcacaca-tacccattttcataca 6879597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 20279571 - 20279688
Alignment:
Q  118 atcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggt 217  Q
    ||||||||| |||||||| |||| |||||||||| ||| ||||||||| | |||   ||| ||||||||| |||||  ||||||||||||| ||||  ||    
T  20279571 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgattaagt 20279670  T
Q  218 tcatgataatcacttatt 235  Q
    |||  |||||||||||||    
T  20279671 tcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 33128135 - 33128258
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||    
T  33128135 atcacaattcaacaacaac-atgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaaca 33128233  T
Q  147 attcatttaacatcaaattaacata 171  Q
    ||||||||| |||  ||||||||||    
T  33128234 attcatttatcattcaattaacata 33128258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 271248 - 271304
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| |  ||||||||||||||||||||||    
T  271248 atcatgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 24826860 - 24826760
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  24826860 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 24826761  T
Q  171 a 171  Q
    |    
T  24826760 a 24826760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 17204445 - 17204529
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcattta 155  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| ||||||||||||||    
T  17204445 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcattta 17204529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 25602102 - 25602158
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||| ||   |||||| ||||||||||||||||    
T  25602102 atcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgagcata 25602158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 36890854 - 36890798
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||| |||||||||   |||||||||||||||| ||||||    
T  36890854 atcatgaaacttatcacaatttatcaacaacatagcataattcaccaattaagcata 36890798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 19666843 - 19666884
Alignment:
Q  275 actaaatgattatgataaaaactaacccccttaccttaatta 316  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  19666843 actaaatgattatgatgaattctaacccccttaccttaatta 19666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaa 313  Q
    |||||||||||||| |||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  296 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 463043 - 463075
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 3798552 - 3798520
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  3798552 atgattatgataataactaacccccttacctta 3798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 4448302 - 4448246
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||| |||||| ||||||| | |||| ||||||||||||| ||||    
T  4448302 atcatgaaacttatcataattcaacaacaacaaagcatcattcaccaattgaacata 4448246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 8944153 - 8944185
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttacctta 8944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 12635817 - 12635785
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttacctta 12635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 12641591 - 12641559
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttacctta 12641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 12728699 - 12728731
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttacctta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 16935900 - 16935932
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  16935900 atgattatgataataactaacccccttacctta 16935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 17006560 - 17006592
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  17006560 atgattatgataataactaacccccttacctta 17006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 22863235 - 22863267
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  22863235 atgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 28974127 - 28974183
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| || |||||||||||||||||   ||||||||| |||| ||||||||    
T  28974127 atcatgaaacttaccacaattcatcaacaacatagcataattcgccaaatgagcata 28974183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 36982396 - 36982364
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  36982396 atgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 42177918 - 42177886
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  42177918 atgattatgataataactaacccccttacctta 42177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 256; Significance: 1e-142; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 31 - 354
Target Start/End: Complemental strand, 6265 - 5941
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6265 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 6166  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6165 aatttcatcattaacaaatcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 6066  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6065 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactatta 5966  T
Q  330 gctctagcttcacttttgctcctat 354  Q
    |||||||||||||||||||||||||    
T  5965 gctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 167 - 354
Target Start/End: Complemental strand, 5923 - 5735
Alignment:
Q  167 acatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-n 265  Q
    ||||||| ||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  266 nnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 354  Q
          ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 31 - 354
Target Start/End: Complemental strand, 44035153 - 44034829
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44035153 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcataatttacaaactacccattttcatacatcatgaacttgc 44035054  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||  || |||||||||||||||||||||||||||||||    
T  44035053 aatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatatctacaacataaacaagaatttcaaagattgggttcatgataatcac 44034954  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034953 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 44034854  T
Q  330 gctctagcttcacttttgctcctat 354  Q
    |||||||||||||||||||||||||    
T  44034853 gctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 21860084 - 21860414
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  21860084 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactactcattttcattcatcatgaacttgc 21860183  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  21860184 aatttcatcattaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagtacgaatttcaaagattgggttcatgataatcac 21860283  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860284 ttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 21860383  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  21860384 gctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 31 - 311
Target Start/End: Complemental strand, 15861608 - 15861327
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15861608 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 15861509  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15861508 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 15861409  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctt 311  Q
    |||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||| |||||||||||||||||    
T  15861408 ttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 22367092 - 22367296
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22367092 cattgatcatgaaacatatcacaattcatcaacaaccatgcata-ttcaccaattgagcataatttacaaactactcattttcatacatcatgaacttgc 22367190  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22367191 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 22367290  T
Q  231 ttattc 236  Q
    ||||||    
T  22367291 ttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 360
Target Start/End: Original strand, 41218667 - 41218808
Alignment:
Q  220 atgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaacccccttaccttaattatc 318  Q
    |||| |||||||||||| |||||||||||||||||||||||||||        ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttaccttaattatc 41218766  T
Q  319 tccaactattagctctagcttcacttttgctcctatgcttct 360  Q
     |||||||||||||| ||||||||||||||||||||| ||||    
T  41218767 accaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 41394527 - 41394609
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttctcc 362  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  41394527 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 22403282 - 22403196
Alignment:
Q  33 ttaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  22403282 ttaatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 22403196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 41212150 - 41212206
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  41212150 atcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgagcata 41212206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 49967728 - 49967784
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  49967728 atcatgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgagcata 49967784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 35522488 - 35522432
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  35522488 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 35522432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 27675120 - 27675191
Alignment:
Q  282 gattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||  |||||||||||||||||||||||||||| |  |||| | ||||||||||| |||||||    
T  27675120 gattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 21650181 - 21650081
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  21650181 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 21650082  T
Q  171 a 171  Q
    |    
T  21650081 a 21650081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 21718306 - 21718362
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||| |||||||||||   |||||||||||||||||||||||    
T  21718306 atcatgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcata 21718362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 20254430 - 20254527
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| ||||| ||||||||||   ||| || ||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  20254430 aattcatcaattaagcataatttcataacaactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 20254527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 27329929 - 27329868
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||| |||||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  27329929 cattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 27329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 35054829 - 35054890
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||| |||||||||| ||||||| ||||||||| ||   |||||||||||||||||||||||    
T  35054829 cattgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgagcata 35054890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaa 313  Q
    |||||||||||||| |||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 37844406 - 37844374
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  37844406 atgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 46523695 - 46523727
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  46523695 atgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 250; Significance: 1e-139; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 166446 - 166116
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  166446 cattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttacaaactacccatttacatacatcatgaacttgc 166347  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||| |||||||| |||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  166346 aatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 166247  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  166246 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacccccttaccttaattatctccaactatta 166147  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||| ||||    
T  166146 gctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 31 - 354
Target Start/End: Complemental strand, 162360 - 162036
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  162360 cattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttacaaactacccatttacatacatcatgaacttgc 162261  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||| |||||||| |||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  162260 aatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 162161  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    ||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  162160 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacccccttaccttaattatctccaactatta 162061  T
Q  330 gctctagcttcacttttgctcctat 354  Q
    |||||||||||||||||||||||||    
T  162060 gctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 164293 - 164349
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  164293 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 164349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 116485 - 116410
Alignment:
Q  278 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  116485 aaatgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 36 - 360
Target Start/End: Original strand, 274521 - 274846
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  274521 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcatacatcatgaacttgcaattt 274620  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  274621 catcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttatt 274720  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    ||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  274721 ctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 274820  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||| ||||    
T  274821 agcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 36 - 360
Target Start/End: Complemental strand, 641328 - 641003
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  641328 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcatacatcatgaacttgcaattt 641229  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  641228 catcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttatt 641129  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    ||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  641128 ctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 641029  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||| ||||    
T  641028 agcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 36 - 360
Target Start/End: Complemental strand, 827134 - 826809
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  827134 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcatacatcatgaacttgcaattt 827035  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  827034 catcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttatt 826935  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    ||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  826934 ctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 826835  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||| ||||    
T  826834 agcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 38 - 360
Target Start/End: Complemental strand, 24717037 - 24716714
Alignment:
Q  38 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttga 137  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |    
T  24717037 catgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactatccattttcatacatcgtgaacttgcaatttca 24716938  T
Q  138 tcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattct 237  Q
    | |||||||||||||||||||||||||||||||||| ||| |||||||||| | |||  |||||||||||||||| ||||||||||||||||||||||||    
T  24716937 ttatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccatataaccacgaatttcaaagatcgggttcatgataatcacttattct 24716838  T
Q  238 cataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctag 336  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  24716837 cataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatcaccaactattagctctag 24716738  T
Q  337 cttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||| ||||    
T  24716737 cttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 39115348 - 39115678
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39115348 cattgatcatgaaacatatcacgattcatcaacaactatgcataattcaccaattgagcataatttacaaattacccattttcatacatcatgaacttgc 39115447  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  39115448 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctttacaacataagcacgaatgtcaaagattgggttcatgataatcac 39115547  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||    
T  39115548 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaacacccttaccttaattattaccaactatta 39115647  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||| ||||||||||||||||||||| ||||    
T  39115648 gctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 31 - 312
Target Start/End: Complemental strand, 41506991 - 41506709
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41506991 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 41506892  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  41506891 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaagattgggttcatgataatcac 41506792  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||| |||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||    
T  41506791 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctta 41506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 51 - 312
Target Start/End: Complemental strand, 24385914 - 24385652
Alignment:
Q  51 acaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattc 150  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24385914 acaattcatcaacaacaatgcttaattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattc 24385815  T
Q  151 atttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattat 250  Q
    |||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24385814 atttaacatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattat 24385715  T
Q  251 gcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  24385714 gcatagaacaagagaaaaggaattaactaaatgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 72 - 222
Target Start/End: Complemental strand, 22321587 - 22321437
Alignment:
Q  72 ataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  22321587 ataattcaccaattgagcataatttacaaactacccattttcatacgtcatgaacttgcaatttcatcatcaacaattcaattaacatcaaattaacata 22321488  T
Q  172 ttaaaatatatctctacaacataggcacgaatttcaaagattgggttcatg 222  Q
    || ||| ||||||||||||| |  |||||||||||||||||||||||||||    
T  22321487 ttcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 16039058 - 16038923
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16039058 atcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 16038959  T
Q  136 gatcatcaacaattcatttaacatcaaattaacata 171  Q
     ||||||||||||||||||| |||  ||||||||||    
T  16038958 catcatcaacaattcatttatcattcaattaacata 16038923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 312
Target Start/End: Complemental strand, 21259630 - 21259391
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||||| |||||||| |||||||| |||||| ||| ||||||||||||||| |    
T  21259630 aattcatcaattgagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 21259531  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnt 272  Q
     ||| ||||| |||||||||  ||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| |||||        |    
T  21259530 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagtagaaat 21259431  T
Q  273 taactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||| |||||||||| ||  |||||||||||||||||    
T  21259430 taactaagtgattatgatgaattctaacccccttacctta 21259391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 17502274 - 17502467
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||||| ||||||| ||||||||||| |||  ||||||||||||| |||||||| ||||| ||||||||| | | ||||||||||||||    
T  17502274 cataattcatcaattgaacataattcacaaactacccttttatatacatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 17502373  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | | ||| ||||| |||||||||  |||| ||||||||||||||||||||| ||||||||||||||  |||| || |||||||||||| |||||    
T  17502374 actcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatagaaaaagag 17502467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 4233968 - 4234161
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| |||||||  |||||| |||||||||||||||  ||||||||| ||| |||||||| ||||| ||||||||| | | ||||||||||||||    
T  4233968 cataattcatcaattgaaaataattcacaaactacccatttatatacatcataaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 4234067  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | | ||| ||||| || ||||||  |||| ||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  4234068 actcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 4234161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 23217990 - 23218183
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||||| ||||||| |||||||| ||||||  ||||||||| ||| |||||||| ||||| ||||||||| | | ||||||||||||||    
T  23217990 cataattcatcaattgaacataattcacaaactagccatttatatacatcattaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 23218089  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | | ||| ||||| |||| ||||| ||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  23218090 actcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 23218183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 16404932 - 16404852
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16404932 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 22234972 - 22234890
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  22234972 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttcataca 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 19993212 - 19993141
Alignment:
Q  47 tatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  19993212 tatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttcataca 19993141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 41246736 - 41246792
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  41246736 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattaagcata 41246792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 37611746 - 37611829
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  37611746 atcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacatacccattttcataca 37611829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 21494592 - 21494452
Alignment:
Q  81 caattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatat 180  Q
    ||||| ||||||||||   |||||||| ||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||| | |||  |    
T  21494592 caattaagcataatttcacaactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaatt 21494493  T
Q  181 atctctacaacataggcacgaatttcaaagattgggttcat 221  Q
    ||| | | ||||   ||||||| ||||||||||||||||||    
T  21494492 atcaccaaaacaagagcacgaaattcaaagattgggttcat 21494452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 18118376 - 18118259
Alignment:
Q  118 atcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggt 217  Q
    ||||||||| |||||||| |||| |||||||||| ||| ||||||||| | |||   ||| ||||||||| ||||   ||||||||||||| ||||  ||    
T  18118376 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgattaagt 18118277  T
Q  218 tcatgataatcacttatt 235  Q
    |||  |||||||||||||    
T  18118276 tcacaataatcacttatt 18118259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 22147555 - 22147652
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  22147555 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 22147652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 20481683 - 20481739
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||| ||| |||||||||||||||||||| | | |||||||||||||||||||||    
T  20481683 atcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgagcata 20481739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 20561800 - 20561740
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 96  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||| | ||||||||    
T  20561800 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataattt 20561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 20573361 - 20573305
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | | |||||||||||||||||||||    
T  20573361 atcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattgagcata 20573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 20647998 - 20647938
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 96  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||| | ||||||||    
T  20647998 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataattt 20647938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 20654074 - 20654018
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||| ||||||    
T  20654074 atcatgaaacttatcacaattcatcaacaacttagcataattcaccaattaagcata 20654018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 22886440 - 22886540
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    |||| |||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  22886440 catagttcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 22886539  T
Q  171 a 171  Q
    |    
T  22886540 a 22886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 2545061 - 2545160
Alignment:
Q  72 ataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||  ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  2545061 ataattcatcaattaagcataattttacaactacccattttcacacattatgaatatgttatttcatcaccaacaattcatttatcattcaattaacata 2545160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 18612523 - 18612620
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  18612523 aattcatcaattaagcataatttcataacaatccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 18612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 18619428 - 18619525
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  18619428 aattcatcaattaagcataatttcataacaatccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 18619525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 3431422 - 3431322
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| || ||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  3431422 cataagtcatcaattaagcataatttcacaacaactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 3431323  T
Q  171 a 171  Q
    |    
T  3431322 a 3431322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 31194251 - 31194217
Alignment:
Q  278 aaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||||    
T  31194251 aaatgattatgatgaaaactaacccccttacctta 31194217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 13662214 - 13662182
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  13662214 atgattatgataataactaacccccttacctta 13662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 13720877 - 13720845
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  13720877 atgattatgataataactaacccccttacctta 13720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 16873000 - 16872968
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  16873000 atgattatgataataactaacccccttacctta 16872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 43373424 - 43373392
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  43373424 atgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 36 - 360
Target Start/End: Original strand, 3992628 - 3992953
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  3992628 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcctacatcatgaacctgcaattt 3992727  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||| ||| |||||||||||| |||||||    
T  3992728 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaaggttgagttcatgataattacttatt 3992827  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992828 ctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 3992927  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||| ||||    
T  3992928 agcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 45581704 - 45582034
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45581704 cattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 45581803  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||| | ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45581804 aatttcatcatcaacaattcattaatcatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 45581903  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaa-cccccttaccttaattatctccaactatt 328  Q
    |||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45581904 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccccttaccttaattatctccaactatt 45582003  T
Q  329 agctctagcttcacttttgctcctatgcttct 360  Q
    ||||||||||||| |||| |||||||| ||||    
T  45582004 agctctagcttca-tttttctcctatgattct 45582034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 7854055 - 7854385
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || || |||||||||||||||||||||||||    
T  7854055 cattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaacataatttaccaattatccattttcatacatcatgaacttgc 7854154  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7854155 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 7854254  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  7854255 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatcaccaactatta 7854354  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||| ||||||||||||||||||||| ||||    
T  7854355 gctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 54038306 - 54037976
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54038306 cattaatcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcataatttacaaactacccattttcatacatcatgaacttgc 54038207  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||||||| ||||| |||| |||||||||||||||    
T  54038206 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaatataagcacgaatgtcaaacattgagttcatgataatcac 54038107  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54038106 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatcaccaactatta 54038007  T
Q  330 gctctagcttcacttttgctcctatgcttct 360  Q
    |||| ||||||||||||||||||||| ||||    
T  54038006 gctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 36 - 360
Target Start/End: Original strand, 2844269 - 2844594
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2844269 atcatgaaacttatcacaattcatcaagaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 2844368  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||||||| | |  ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  2844369 catcatcaacaattcatttaacatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgggttcatgataatcgcttatt 2844468  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctct 334  Q
    | ||||||||||||||||||||| |||||        | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2844469 cccataatcaattatgcatagaataagagaaaaagaatcaactaaatgattatgataaaaactaacccccttaccttaattatctcaaactattagctct 2844568  T
Q  335 agcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||| ||||    
T  2844569 agcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 17956166 - 17955832
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  17956166 cattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgagtataatttacaaactactcattttcatacatcatgaacttgc 17956067  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | | |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  17956066 aatttcatcatcaacaattcatttaacatcaaattaacatattcagacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcac 17955967  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactatta 329  Q
    |||||||||||||| |||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17955966 ttattctcataatcgattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatctccaactatta 17955867  T
Q  330 gct----ctagcttcacttttgctcctatgcttct 360  Q
    |||    ||||||||||||||||||||||| ||||    
T  17955866 gctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 31 - 312
Target Start/End: Original strand, 30153015 - 30153297
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30153015 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 30153114  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30153115 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 30153214  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||    
T  30153215 ttattctcataatcaattatgcatagaacaagagaaaaagaattaattaaatgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 31 - 311
Target Start/End: Complemental strand, 54685483 - 54685202
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  54685483 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttaccaactacccattttcatacatcatgaacttgc 54685384  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54685383 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 54685284  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctt 311  Q
    ||||||||||||||||||||||||||||||||||        ||||| |||||||||| ||||| |||||||| ||||||||    
T  54685283 ttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 54685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 53771119 - 53771397
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771119 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 53771218  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53771219 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 53771318  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  53771319 ctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 23492451 - 23492728
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23492451 atcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 23492550  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     || |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23492551 cataatcaacaattcatttaacatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaaagattgggttcatgataatcacttatt 23492650  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    | |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  23492651 cccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 94 - 360
Target Start/End: Original strand, 55513006 - 55513273
Alignment:
Q  94 tttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacat 193  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  55513006 tttacaaactacccattttcatacatcattaacttgcaatttcatcatcaacaattcatttaacatcgaattaacatattcaaacatatctctacaacat 55513105  T
Q  194 aggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataa 292  Q
    | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||        |||||||||||||||||||||    
T  55513106 aagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataa 55513205  T
Q  293 aaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55513206 aaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 16261531 - 16261809
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16261531 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcgtacatcatgaacttgcaattt 16261630  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16261631 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 16261730  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| |||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  16261731 ctcataatcaattacgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 31 - 312
Target Start/End: Original strand, 33341954 - 33342236
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33341954 cattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgagcataatttaccaactacccattttcatacatcatgaacttgc 33342053  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  33342054 aatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatctctaccacattagcacgaatttcaaagattgggttcatgataatcac 33342153  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||| |||||||| |||||||||    
T  33342154 ttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 38167992 - 38168269
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38167992 atcatgaaacttattacaattcatcaacaacatagcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 38168091  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  38168092 catcatcaacaattcatttaacatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaaagattgggttcatgataatcacttatt 38168191  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    | |||||||||||||||||||||||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  38168192 cccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 58 - 312
Target Start/End: Original strand, 28558271 - 28558526
Alignment:
Q  58 atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaac 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |    
T  28558271 atcaacaaccatgcataattcaccaattgagcatcatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttatc 28558370  T
Q  158 atcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 257  Q
    |||||||||||||||| ||| |||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  28558371 atcaaattaacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatgga 28558470  T
Q  258 acaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||        ||||||||||||||||||||||||||||||| |||||||||    
T  28558471 acaagagaaaaagaattaactaaatgattatgataaaaactaaccctcttacctta 28558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 18970034 - 18970227
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||||||| ||||||||||||||||||    
T  18970034 cataattcatcaattgagcataattcacaaactacccatttacatacatcatgaacatgaaatttcatcatcaacaattcaattaacatcaaattaacat 18970133  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | | ||| ||||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| |||||    
T  18970134 acttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcatagaaaaagag 18970227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 48421690 - 48421855
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||||||||||| |||||||  ||||||||||||||  ||||||||||||| |||||||| |||| |||||||||| ||| ||||||||||||||    
T  48421690 cataattcaccaattgaacataattctcaaactacccatttatatacatcatgaacatgcaatttcatcaccaacaattcaattatcatcaaattaacat 48421789  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattc 236  Q
    | | ||| ||||| |||||||||  ||| |||||||||||||||||||||  ||||||||||||||    
T  48421790 actcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 74 - 345
Target Start/End: Original strand, 15550714 - 15550986
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||||| |||||||| |||||||| |||||| ||| ||||||||||||||| |    
T  15550714 aattcatcaattgagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 15550813  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnt 272  Q
     ||| ||||| |||||||||  ||||||||||||||  |||||||||  ||||||||||||||  || | || ||||||||| ||  ||||        |    
T  15550814 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaattagcacttatgcataaaaagagagagtagaaat 15550913  T
Q  273 taactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 345  Q
    ||||||| |||||||||| ||  |||||||||||| |||||||||| |||| |  |||| | |||||||||||    
T  15550914 taactaagtgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttt 15550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 19232089 - 19232169
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19232089 atgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 15857195 - 15857120
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 355  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  15857195 atgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 16744073 - 16743991
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttctcc 362  Q
    ||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  16744073 atgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 16996228 - 16996172
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16996228 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 16996172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 317677 - 317621
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  317677 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaatttagcata 317621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 50112220 - 50112164
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  50112220 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 50112164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 22144441 - 22144358
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||  | || ||||||||||||||||    
T  22144441 atcatgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgagcatattttcaacacatacccattttcataca 22144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 19946812 - 19946962
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   |||||| ||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  19946812 cataaatcatcaattaagcataatttcacaactactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 19946911  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcat 221  Q
    | | |||| |||| | | ||||   ||||||| ||||||||||||||||||    
T  19946912 actcaaatttatcaccaaaacaagagcacgaaattcaaagattgggttcat 19946962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 6146913 - 6146832
Alignment:
Q  38 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||  | || ||||||||||||||||    
T  6146913 catgaaacttatcacaattcatcaacaacaatgcatgattcaccaattgagcatattttcaacacatacccattttcataca 6146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 6154500 - 6154419
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcata 116  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||  | || ||||||||||||||    
T  6154500 atcatgaaacttatcacaattcatcaataacaatgcataattcaccaattgagcatattttcaacacatacccattttcata 6154419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 34439512 - 34439451
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattta 97  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  34439512 atcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatatttta 34439451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12349899 - 12349843
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  12349899 atcatgaaacttatcacaattcatcaactacgatgcataattcaccaattgagcata 12349843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 13817590 - 13817646
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  13817590 atcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata 13817646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 19570857 - 19570801
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  19570857 atcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata 19570801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 53898624 - 53898541
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  53898624 atcatgaaacttatcacaatgcaacaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 53898541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12349708 - 12349652
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  12349708 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 12349652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 14177105 - 14177017
Alignment:
Q  118 atcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttc 206  Q
    ||||||||| |||||||| ||||||||||||||| ||| |||||||| |||||| | ||| ||||| |||||||||  | |||||||||    
T  14177105 atcatgaacatgcaatttcatcatcaacaattcaattatcatcaaatgaacatactgaaacatatcactacaacatgaggacgaatttc 14177017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 17100731 - 17100787
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  17100731 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 17100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 17101416 - 17101472
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  17101416 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 17101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 54424090 - 54424146
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  54424090 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 54424146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 8275986 - 8275902
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcattta 155  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| ||||||||||||||    
T  8275986 cataattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcattta 8275902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 9303241 - 9303141
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  9303241 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 9303142  T
Q  171 a 171  Q
    |    
T  9303141 a 9303141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 14285075 - 14285175
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| |||||| |||   |||||||||||||||||||  |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  14285075 cataattcatcaattaagcatattttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 14285174  T
Q  171 a 171  Q
    |    
T  14285175 a 14285175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 14298499 - 14298555
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||  ||||||| | |||||||||||||||||||||||    
T  14298499 atcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcata 14298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 14304126 - 14304182
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||  ||||||| | |||||||||||||||||||||||    
T  14304126 atcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcata 14304182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 16934115 - 16934015
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  16934115 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16934016  T
Q  171 a 171  Q
    |    
T  16934015 a 16934015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 258
Target Start/End: Original strand, 17393590 - 17393735
Alignment:
Q  114 atacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaaagat 212  Q
    ||||| ||||||| |||||||| ||| |||| |||||| ||| || ||||||||||||   ||| ||||| ||||||| ||| |||||||||||||  ||    
T  17393590 atacagcatgaacatgcaatttcatcgtcaataattcaattatcaacaaattaacatacccaaacatatcactacaac-tagagcacgaatttcaacaat 17393688  T
Q  213 tgggttcatgataatcacttattctca--taatcaattatgcatagaa 258  Q
    |  |||||| ||||||||||| |||||  ||| |||||||||||||||    
T  17393689 taagttcataataatcactta-tctcaattaagcaattatgcatagaa 17393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 19261008 - 19260952
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   | |||||||||||||||||||||    
T  19261008 atcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgagcata 19260952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 35123774 - 35123830
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  35123774 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 35123830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 16182114 - 16182032
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    ||||| |||| ||||||||||||||||| || ||||||||||||||||||  ||||| ||| ||| | ||||||||||||||||    
T  16182114 atcattaaacttatcacaattcatcaacgacaatgcataattcaccaatttggcatattttcacaca-tacccattttcataca 16182032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 17523057 - 17523002
Alignment:
Q  37 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||| |||||||||||||||| |||   |||||||||||||||||||||||    
T  17523057 tcatgaaacttatcacaattcatcaataacatagcataattcaccaattgagcata 17523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 8268886 - 8268802
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcattta 155  Q
    ||||||||| ||||| ||||||||||   ||| ||| |||||||||||| |||||| ||  |||| |||| ||||||||||||||    
T  8268886 cataattcatcaattaagcataatttcataacaaccaattttcatacattatgaacatgttatttcatcaccaacaattcattta 8268802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 11402752 - 11402896
Alignment:
Q  120 catgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttc 219  Q
    ||||||| || ||||| |||| |||||||||| ||| ||||||||| | ||| | ||| ||||| ||| || ||  |||||||||||||  |||  ||||    
T  11402752 catgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttc 11402851  T
Q  220 atgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    |  ||||||||||||||  |||| || || |||||||||| ||||    
T  11402852 acaataatcacttattcaaataagcacttgtgcatagaactagag 11402896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 38810943 - 38810868
Alignment:
Q  278 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||| ||  ||||||||||||||||| ||||| |||| |  |||| | ||||||||||| |||||||    
T  38810943 aaatgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 12539156 - 12539066
Alignment:
Q  118 atcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 208  Q
    ||||||||| |||||||| ||||||||||||||| ||| || |||||| ||||| | ||  ||||| ||| ||||   |||||||||||||    
T  12539156 atcatgaacatgcaatttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatcactaaaacaagagcacgaatttcaa 12539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 13301401 - 13301323
Alignment:
Q  275 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    |||||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | ||||||||||| |||||||    
T  13301401 actaaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 13312057 - 13311979
Alignment:
Q  275 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    |||||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | ||||||||||| |||||||    
T  13312057 actaaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaa 313  Q
    |||||||||||||| |||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  296 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 39656453 - 39656494
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccatttt 112  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  39656453 cataattcaccaattgaatataattcacaaactacccatttt 39656494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 51961068 - 51961031
Alignment:
Q  275 actaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||| || ||||||||||||||||||    
T  51961068 actaaatgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 2050115 - 2050147
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  2050115 atgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 8268682 - 8268650
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttacctta 8268650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 8275782 - 8275750
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttacctta 8275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 14842519 - 14842487
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  14842519 atgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 18911300 - 18911332
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  18911300 atgattatgataataactaacccccttacctta 18911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 19260781 - 19260749
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  19260781 atgattatgataaagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 37915361 - 37915290
Alignment:
Q  137 atcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaa 208  Q
    ||||||||||||||| |||||| ||||||||||||   ||| ||||| ||||||| ||| |||||||||||||    
T  37915361 atcatcaacaattcaattaacaacaaattaacatacccaaacatatcactacaac-tagagcacgaatttcaa 37915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 38527841 - 38527889
Alignment:
Q  70 gcataattcaccaattgagcataatttacaaactacccattttcataca 118  Q
    ||||||||||||||||||||||| ||| | |  ||||||||||||||||    
T  38527841 gcataattcaccaattgagcatattttcccacatacccattttcataca 38527889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 31 - 360
Target Start/End: Complemental strand, 633 - 304
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  633 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactattcattttcatacatcatgaacttgc 534  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  533 aatttcatcatctacaattcatttaacatcaaattaacatattcaaatatatctctacaacataagcacaaatttcaaatattgggttcatgataatcac 434  T
Q  231 ttattctcataatcaattatgcatagaacaagagnnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattag 330  Q
    ||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||| | ||||||| |||||||||||||| |||||||||||    
T  433 ttattctcataatcaattatgcatagaacaagagaaaagaattaactagatgattatgataaagaataaccccgttaccttaattatcaccaactattag 334  T
Q  331 ctctagcttcacttttgctcctatgcttct 360  Q
    ||| ||||||||||||||||||||| ||||    
T  333 ctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 31 - 311
Target Start/End: Original strand, 11342758 - 11343039
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342758 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 11342857  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11342858 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 11342957  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctt 311  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  11342958 ttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 11343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 31 - 312
Target Start/End: Original strand, 2031883 - 2032165
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2031883 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 2031982  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2031983 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 2032082  T
Q  231 ttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||| |||||||||||||||||||||||||||        ||||||||| ||||||||| |||||||||||||||||||||    
T  2032083 ttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaacgattatgatgaaaactaacccccttacctta 2032165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 36 - 264
Target Start/End: Original strand, 21205004 - 21205232
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205004 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 21205103  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21205104 catcatcaacaattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 21205203  T
Q  236 ctcataatcaattatgcatagaacaagag 264  Q
    |||||||||||||||||||||||||||||    
T  21205204 ctcataatcaattatgcatagaacaagag 21205232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 21650773 - 21651050
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21650773 atcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 21650872  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21650873 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 21650972  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    | ||||||||| |||||| ||||||||||        ||||| |||||||||||||||| | ||||||||||||||||    
T  21650973 cccataatcaactatgcacagaacaagagaaaaagaattaaccaaatgattatgataaatattaacccccttacctta 21651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 71 - 312
Target Start/End: Original strand, 16105757 - 16105999
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||| ||||||||| |||||||||||||||| |||||||    
T  16105757 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacat 16105855  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnn 268  Q
    ||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  16105856 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 16105955  T
Q  269 nnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
       ||||  |||||||||||||||| ||||||||||||||||||    
T  16105956 gaattaatcaaatgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 22662805 - 22662653
Alignment:
Q  83 attgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatat 182  Q
    ||||| |||||||  ||||||||||||||  ||||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  22662805 attgaacataattctcaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatattcaaatatat 22662706  T
Q  183 ctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
    | |||||||||  |||||||||||||||||||||||||  |||||||||||||    
T  22662705 cactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 25004929 - 25005094
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| |||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||| || || ||||||||| ||| | | |||||||||     
T  25004929 cataaatcaccaattgagcataattctcaaactacccatttacatacatcatgaacatgcaatttcataattaacaattcaattatccttaaattaacac 25005028  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattc 236  Q
    | | ||| ||||| || ||||||  |||||||||||||||||||||||||  ||||||||||||||    
T  25005029 actcaaacatatcacttcaacatgagcacgaatttcaaagattgggttcacaataatcacttattc 25005094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 21397170 - 21397253
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  21397170 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 21397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 355  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 4865341 - 4865397
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  4865341 atcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgagcata 4865397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 21646908 - 21646826
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||| || || ||||||||||||||||    
T  21646908 atcatgaaacatatcacaattcatcaacaacgatacataattcaccaattgaacat-attttcatacatacccattttcataca 21646826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 1168373 - 1168317
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  1168373 atcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgagcata 1168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 24475658 - 24475738
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  24475658 atcatgaaacata--acaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttcataca 24475738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 28261599 - 28261655
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  28261599 atcataaaacatatcacaatttatcaacaacaatgcataattcaccaattgagcata 28261655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 7529014 - 7529114
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||  |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  7529014 cataattcatcaattaagcataatttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 7529113  T
Q  171 a 171  Q
    |    
T  7529114 a 7529114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 20712154 - 20712210
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||| ||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  20712154 atcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgagcata 20712210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 17909622 - 17909719
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  17909622 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 17909719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 9730524 - 9730424
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  9730524 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 9730425  T
Q  171 a 171  Q
    |    
T  9730424 a 9730424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 24183301 - 24183245
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||  ||||||||||| ||||||| | |||||||||||||||||||||||    
T  24183301 atcatgaaactcatcacaattcaacaacaacaaagcataattcaccaattgagcata 24183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 11584124 - 11584188
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccat---gcataattcaccaattgagcata 92  Q
    |||| ||||||||||||||||||||||| ||||||| |    |||||||||||||||||||||||    
T  11584124 cattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaattgagcata 11584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11337355 - 11337299
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||| ||||||||    
T  11337355 atcatgaaacttatcacaattcatcaacaacataacataattcaccaaatgagcata 11337299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 21906795 - 21906851
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||| ||||||| ||||    
T  21906795 atcatgaaacttatcacaattcatcaacaacatagcataattcatcaattgaacata 21906851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 108974 - 108874
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  | || |||| |||||||||||||| |||  |||||||||    
T  108974 cataagtcatcaattaagcataatttcacaacaatccattttcatacattatgaacatgttaattcatcaccaacaattcatttatcattcaattaacat 108875  T
Q  171 a 171  Q
    |    
T  108874 a 108874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 7425631 - 7425663
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  7425631 atgattatgataataactaacccccttacctta 7425663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 23507270 - 23507302
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  23507270 atgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 35791047 - 35791015
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  35791047 atgattatgataataactaacccccttacctta 35791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 1155 - 878
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1155 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 1056  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1055 catcatcaacaattcatttaacatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 956  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    | |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  955 cccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 217; Significance: 1e-119; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 55659 - 55936
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  55659 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcctacatcatgaacttgcaattt 55758  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55759 catcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 55858  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  55859 ctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 108179 - 108075
Alignment:
Q  210 gattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaaccccctta 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||        ||||| |||||||||||||||| |||||||||||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  308 cctta 312  Q
    |||||    
T  108079 cctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 104555 - 104477
Alignment:
Q  275 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    |||||||||||||||| ||  ||||||| ||||||||||||| | | || | ||||| | ||||||||||| |||||||    
T  104555 actaaatgattatgatgaattctaacccacttaccttaattagcacaaattcttagcccaagcttcactttagctccta 104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 210; Significance: 1e-115; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 13563 - 13285
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13563 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 13464  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13463 catcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 13364  T
Q  236 ctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  13363 ctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 21537 - 21432
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21537 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 21438  T
Q  136 gatcat 141  Q
     |||||    
T  21437 catcat 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 30164 - 30497
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgca---taattcaccaattgagcataatttacaaactacccattttcatacatcatgaact 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||   | |  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  30164 cattgatcatgaaacatatcacaattcatcaacaaccatacaatttcaaacaacaattgagcataatttacaaactacccattttcatacatcatgaact 30263  T
Q  128 tgcaatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataat 227  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  30264 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcatgaatttcaaagatagggttcatgataat 30363  T
Q  228 cacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaattatctccaacta 326  Q
    ||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||    
T  30364 cacttattcccataatcaattatgcatagaacaagagaaaaataattaactaaatgattatgatgaaaaataacccccttaccttaattatcaccaatta 30463  T
Q  327 ttagctctagcttcacttttgctcctatgcttct 360  Q
    ||| ||| ||||||||||||||| ||||| ||||    
T  30464 ttaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 6720 - 6443
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6720 atcatcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 6621  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  6620 catcatcaacaattcatttgacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataagcacctatt 6521  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
     ||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||    
T  6520 atcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 17581 - 17304
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17581 atcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 17482  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     |||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||    
T  17481 catcatcaacaattcatttaaaatcaaattaacatattcaaacatatctctaccacataagcactaatttcaaagattgggttcatgataatcaattatt 17382  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||||||||||||||||        ||| |||||||||||||||||| |||||||| |||||||||    
T  17381 ctcataatcaattatgcatagaacaagagaaaaagaattacctaaatgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 31 - 312
Target Start/End: Complemental strand, 12702 - 12418
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12702 cattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 12603  T
Q  131 aatttgatcatcaacaatt--catttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatc 228  Q
    ||||| |||||||||||||  |||| | ||||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||||||||||||||     
T  12602 aatttcatcatcaacaattcacattaatcatcaaattaacatattcaaacatatctctacaacataagcacaaatttcaaagattgggttcatgataata 12503  T
Q  229 acttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||| |||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||    
T  12502 acttattcccataatcaattatgcatagaacaaaagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 19083 - 19049
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaa 65  Q
    |||||||||||||||||||||||||||||||||||    
T  19083 cattaatcatgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 182; Significance: 2e-98; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 193664 - 193396
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193664 atcatgaaacatatcacaata-atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 193566  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| ||||||||         ||||||||||||| ||||||||||||||||||||||||||    
T  193565 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctct---------gcacgaatttcaatgattgggttcatgataatcacttatt 193475  T
Q  236 ctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttaccttaa 313  Q
    |||||||||||||||||||||||||||||        ||||| |||||||||||||||| |||||||||||||||||||    
T  193474 ctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 186702 - 186566
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186702 atcatgaaacatatcacaata-atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 186604  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatatt 173  Q
     |||||||||||||||||||||||||||||||||||||    
T  186603 catcatcaacaattcatttaacatcaaattaacatatt 186566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 15027 - 15236
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  15027 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaaataaacattttcatacatcatgaacttgcaattt 15126  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15127 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgggttcatgataatcacttatt 15226  T
Q  236 ctcataatca 245  Q
    | ||||||||    
T  15227 cccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 914 - 882
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  914 atgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 171; Significance: 9e-92; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 67 - 312
Target Start/End: Complemental strand, 4593 - 4346
Alignment:
Q  67 catgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaatta 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4593 catgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatta 4494  T
Q  167 acatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag- 264  Q
    ||||||| ||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||     
T  4493 acatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaatgaagaga 4394  T
Q  265 nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
           ||||| ||||||||||||||||  |||||||||||||||||    
T  4393 aaaagaattaaccaaatgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 205 - 5
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  205 atcatgaaacttatcataattcatcaattattatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 106  T
Q  136 gatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttatt 235  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  105 catcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 6  T
Q  236 c 236  Q
    |    
T  5 c 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 31 - 312
Target Start/End: Complemental strand, 10148 - 9882
Alignment:
Q  31 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgc 130  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||                 ||||||||||||||||||||||||||||    
T  10148 cattgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt-----------------tacccattttcatacatcatgaacttgc 10066  T
Q  131 aatttgatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcac 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10065 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcac 9966  T
Q  231 ttattctcataatcaa-ttatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaacccccttacctta 312  Q
    ||||| |||||||||| ||||||||||||||||||        ||||| |||||||||||||||| ||||||||||||||||||    
T  9965 ttattttcataatcaatttatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 179 - 360
Target Start/End: Original strand, 42575 - 42754
Alignment:
Q  179 atatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaact 277  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||    
T  42575 atatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaact 42674  T
Q  278 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||    
T  42675 aaatgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 71 - 311
Target Start/End: Original strand, 130670 - 130911
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||| ||||||||| |||||||||||||||| ||||| |    
T  130670 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacgt 130768  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnn 268  Q
    ||  ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  130769 atccaaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 130868  T
Q  269 nnnttaactaaatgattatgataaaaactaacccccttacctt 311  Q
       ||||  |||||||||||||||| |||||||||||||||||    
T  130869 gaattaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 89637 - 89578
Alignment:
Q  37 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 96  Q
    ||||||||| |||||||||| | ||||||| | ||||||||||||||||||||| |||||    
T  89637 tcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgagcacaattt 89578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 9684 - 9565
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaattt 135  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9684 atcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcataatttacaaactacccattttcatacatcataaacttgcaattt 9585  T
Q  136 gatcatcaacaattcattta 155  Q
     |||||||||||||||||||    
T  9584 catcatcaacaattcattta 9565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 44279 - 44071
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||| ||||||| ||| ||||||||  ||||||||||||| | |||||||||  |||| |||||||||||||| |||||||| ||||||||||    
T  44279 atcacaattcaacaacaac-atgtcataattcgtcaattgagcataactcacaaactacttatttacatacatcatgaacatgcaatttcatcatcaaca 44181  T
Q  147 attcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 246  Q
    ||||| ||| ||||||||||||||| | ||| ||||| |||||||||  |||||||||||||||||| ||||||  ||||||||||||||  |||||||     
T  44180 attcaattaccatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcac 44081  T
Q  247 ttatgcatag 256  Q
    ||||||||||    
T  44080 ttatgcatag 44071  T

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Target: scaffold1295 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 219 - 384
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||||||||||||| ||||||||| |||||  ||||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||    
T  219 cataattcaacaattgagcataattcacaaactacacatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacat 318  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattc 236  Q
    | | ||| ||||| |||||||||  ||| |||||||||||||||||||||  ||||||||||||||    
T  319 actcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattc 384  T

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Target: scaffold0507 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 345
Target Start/End: Complemental strand, 1643 - 1371
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| |||||||||||||||  |||||||| |||||  ||||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||    
T  1643 cataattcatcaattgagcataattctcaaactactcatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacat 1544  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnn 270  Q
    | | ||| ||||| |||||||||  |||||||||||||||||||||||||  ||||||| ||||||   ||| || |||| |||| |||||  |          
T  1543 actcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattcaattaagcacttattcatacaacaaatg--aaaa 1446  T
Q  271 nttaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 345  Q
     |  |||||||||||||||| ||  ||||||||||||||| ||||||| |||| |  |||||| |||||||||||    
T  1445 ctacactaaatgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcacttt 1371  T

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Target: scaffold0037 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 95053 - 95192
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac----aaactacccattttcatacatcatgaacttgca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||| | ||||||||||||||||||||||||    
T  95053 atcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttacaaataaactatctattttcatacatcatgaacttgca 95152  T
Q  132 atttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||| ||||||||||||||||||| |||  ||||||||||    
T  95153 atttcatcatcaacaattcatttatcattcaattaacata 95192  T

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Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 24897 - 24841
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  24897 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 24841  T

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Target: scaffold0079 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 3981 - 3786
Alignment:
Q  73 taattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatat 172  Q
    ||||||| ||||||| ||||||| |||||||||||||||  ||| ||||||||| |||||||| ||||| ||||||||| | | |||||||||||||||     
T  3981 taattcatcaattgaacataattcacaaactacccatttatatatatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatac 3882  T
Q  173 taaa----atatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 264  Q
    | ||    ||||||| |||||||||  ||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  3881 tcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 3786  T

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Target: scaffold0057 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 5996 - 6133
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| |||||||||| |||| ||||||||||||||| | || ||||||||| |||||||| ||||||||||||||| ||| |||||| |||||||    
T  5996 cataaatcatcaattgagcacaattcacaaactacccatttacttatatcatgaacatgcaatttcatcatcaacaattcaattatcatcaatttaacat 6095  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaa 208  Q
    | | ||| ||||| |||||||||  |||| ||||||||    
T  6096 actcaaacatatcactacaacatgagcacaaatttcaa 6133  T

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Target: scaffold1164 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

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Target: scaffold0122 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

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Target: scaffold0122; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

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Target: scaffold0091 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 32281 - 32363
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  32281 atcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcat-attttcaaacatacccattttcataca 32363  T

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Target: scaffold0091; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 42022 - 41940
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  42022 atcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatatttt-caaacatacccattttcataca 41940  T

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Target: scaffold0083 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 14952 - 15034
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  14952 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttcataca 15034  T

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Target: scaffold0077 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 15640 - 15584
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15640 atcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 15584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 36869 - 36836
Alignment:
Q  280 atgattatgataaaaactaacccccttaccttaa 313  Q
    |||||||||||||| |||||||||||||||||||    
T  36869 atgattatgataaagactaacccccttaccttaa 36836  T

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Target: scaffold0673 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 7014 - 6932
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  7014 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttcataca 6932  T

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Target: scaffold0673; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 991 - 935
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  991 atcatgaaacttatcacaaatcatcaataacaatgcataattcaccaattgagcata 935  T

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Target: scaffold0049 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 360  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

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Target: scaffold0011 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 254983 - 254900
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  254983 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 254900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 261589 - 261506
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  261589 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 261506  T

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Target: scaffold0876 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 94 - 164
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcc 351  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 355  Q
    |||||||||| || |||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  281 tgattatgataaaaactaacccccttaccttaattatc 318  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 17812 - 17962
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  17812 cataattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 17911  T
Q  171 attaaaatatatctctacaacataggcacgaatttcaaagattgggttcat 221  Q
    | | |||  |||| | | ||||   ||||||| ||||||||||||||||||    
T  17912 actcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 17962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 5415 - 5359
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5415 atcatgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgagcata 5359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 132419 - 132363
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  132419 atcatgaaacttatcacaattcatcaacaacgatgcataattcaccaattgagcata 132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 88353 - 88409
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  88353 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgatcata 88409  T

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Target: scaffold0396 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11877 - 11821
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  11877 atcatgaaacttatcaaaattcatcaacaacaatgcataattcaccaattgagcata 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 38376 - 38432
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  38376 atcatgaaacttatcacaattcatcaacaacaatgcataattcgccaattgagcata 38432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 146679 - 146735
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  146679 atcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgagcata 146735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 146906 - 146938
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  146906 atgattatgataaagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 22769 - 22825
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  22769 atcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcata 22825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 128127 - 128095
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  128127 atgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 70791 - 70735
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  70791 atcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 70735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 165107 - 165007
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   ||  |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  165107 cataattcatcaattaagcataatttcataagaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 165008  T
Q  171 a 171  Q
    |    
T  165007 a 165007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 60884 - 60933
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 85  Q
    |||||||||| |||||||||||| ||||||| | ||||||||||||||||    
T  60884 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaatt 60933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 172210 - 172242
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  172210 atgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 177913 - 177945
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  177913 atgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 4363 - 4445
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 118  Q
    ||||| |||| |||||||||||||||||||| |||||||||||||||||||| |||| ||| ||| | ||||||||||||||||    
T  4363 atcataaaacttatcacaattcatcaacaacaatgcataattcaccaattgaacatattttcacaca-tacccattttcataca 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 11823 - 11740
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 118  Q
    |||||||||| | |||||||||||||||||| ||||||||||||| ||||||||||| |||  | || ||||||||||||||||    
T  11823 atcatgaaacttttcacaattcatcaacaacaatgcataattcactaattgagcatattttcaacacatacccattttcataca 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 1395 - 1451
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  1395 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 21588 - 21646
Alignment:
Q  34 taatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  21588 taatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 21646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 31292 - 31345
Alignment:
Q  39 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||| ||||||||||||||||||||   | |||||| ||||||||||||||    
T  31292 atgaaacttatcacaattcatcaacaacatagtataatttaccaattgagcata 31345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 222 - 278
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  222 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 5722 - 5622
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    |||||||||  |||| ||||||||||  |||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  5722 cataattcattaattaagcataatttcaaaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 5623  T
Q  171 a 171  Q
    |    
T  5622 a 5622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 7647 - 7703
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||    
T  7647 atcatgaaacttatcataatttatcaacaacaatgcataattcaccaattgagcata 7703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 10015 - 10071
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  10015 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 10071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 34554 - 34454
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  34554 cataattcatcaattaagcataatttcacaactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 34455  T
Q  171 a 171  Q
    |    
T  34454 a 34454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 61391 - 61268
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||    
T  61391 atcacaattcaacaacaac-atgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaaca 61293  T
Q  147 attcatttaacatcaaattaacata 171  Q
    ||||||||| |||  ||||||||||    
T  61292 attcatttatcattcaattaacata 61268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 48903 - 48935
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  48903 atgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 153956 - 153924
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  153956 atgattatgataataactaacccccttacctta 153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 85410 - 85466
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||| ||||||    
T  85410 atcatgaaacttatcacaattcatcaacaacctagcataattcaccaattaagcata 85466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 159377 - 159438
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcataattt 96  Q
    |||||||||| |||||||||||| || ||||   ||||||||| ||||||||||||||||||    
T  159377 atcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataattt 159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 5338 - 5485
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacatatt 173  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| ||   |||||||||| |    
T  5338 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacatact 5437  T
Q  174 aaaatatatctctacaacataggcacgaatttcaaagattgggttcat 221  Q
     |||  |||| | | ||||   ||||||| ||||||||||||||||||    
T  5438 caaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 5485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 48225 - 48286
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattta 97  Q
    |||||||||| | |||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  48225 atcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttta 48286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 61673 - 61734
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattta 97  Q
    |||||||||| | |||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  61673 atcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttta 61734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 745 - 689
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||| ||||||||    
T  745 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcata 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 17478 - 17355
Alignment:
Q  48 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaaca 146  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||   | | |||||||||||||||| |||||| ||  |||| |||| |||||    
T  17478 atcacaattcaacaacaac-atgtcataagtcatcaattaagcataatttcacagcaacccattttcatacattatgaacatgttatttcatcaccaaca 17380  T
Q  147 attcatttaacatcaaattaacata 171  Q
    ||||||||| |||  ||||||||||    
T  17379 attcatttatcattcaattaacata 17355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 687 - 631
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||| ||||||||    
T  687 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcata 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 11862 - 11958
Alignment:
Q  75 attcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    ||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  |||| |||| |||||||||||||| |||  ||||||||||    
T  11862 attcatcaattaagcataatttcacaactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 11958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 26372 - 26340
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 118132 - 118076
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  118132 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacata 118076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 109631 - 109582
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 85  Q
    |||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  109631 atcatgaaacttatcacaattcatcaacaacttagcataattcaccaatt 109582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 49989 - 49889
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||||||| ||||| || |||||||   |||||||||||||||||||  |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  49989 cataattcatcaattaagtataatttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 49890  T
Q  171 a 171  Q
    |    
T  49889 a 49889  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 253158 - 253102
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | |||| ||||||||||||||||||    
T  253158 atcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgagcata 253102  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 247398 - 247366
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  247398 atgattatgataaagactaacccccttacctta 247366  T

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Target: scaffold0615 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 6357 - 6257
Alignment:
Q  71 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacat 170  Q
    ||||| ||| ||||| ||| ||||||   ||| |||||||||||||||| |||||| ||  |||| |||| |||||||||||||| |||  |||||||||    
T  6357 cataagtcatcaattaagcttaatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 6258  T
Q  171 a 171  Q
    |    
T  6257 a 6257  T

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Target: scaffold0338 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 9069 - 9121
Alignment:
Q  40 tgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||| |||||||| |||||||||||   |||||||||||||||||||||||    
T  9069 tgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcata 9121  T

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Target: scaffold0160 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 99 - 155
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||| ||   ||||||||||| |||||||||||    
T  99 atcatgaaacttatcacaattcatcaaccacgtagcataattcacgaattgagcata 155  T

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Target: scaffold0158 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 25040 - 25092
Alignment:
Q  40 tgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||| |||||||||||| ||||||| |  ||||||||||||||||||||||    
T  25040 tgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 25092  T

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Target: scaffold0158; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 25293 - 25345
Alignment:
Q  40 tgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||| |||||||||||| ||||||| |  ||||||||||||||||||||||    
T  25293 tgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 25345  T

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Target: scaffold0117 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11737 - 11681
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    ||||||||||  ||||||||||| ||||||| | |||||||||||||||| ||||||    
T  11737 atcatgaaactgatcacaattcaacaacaacaaagcataattcaccaattaagcata 11681  T

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Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 33740 - 33800
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 96  Q
    |||||||||| ||||| ||||||||||||||   |||||||||||||||| | ||||||||    
T  33740 atcatgaaacttatcaaaattcatcaacaacatagcataattcaccaattaaacataattt 33800  T

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Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 5019 - 5075
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| |  ||||||||||||||| ||||||    
T  5019 atcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcata 5075  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 112714 - 112658
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 92  Q
    |||||||||| ||||||||||||||||| ||   ||||||||||| |||||||||||    
T  112714 atcatgaaacttatcacaattcatcaaccacatagcataattcactaattgagcata 112658  T

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Target: scaffold0413 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 6024 - 5990
Alignment:
Q  278 aaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||| ||||||||||||||||||    
T  6024 aaatgattatgataaagactaacccccttacctta 5990  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 57426 - 57392
Alignment:
Q  278 aaatgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||||| ||||||||||||||||||    
T  57426 aaatgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0317 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 12734 - 12637
Alignment:
Q  74 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttgatcatcaacaattcatttaacatcaaattaacata 171  Q
    |||||| |||||||||||||||||  || ||  |||||  ||| | ||||||| |||||||| |||||||| |||||| ||| || ||| ||||||||    
T  12734 aattcatcaattgagcataatttatcaattattcatttatatataacatgaacatgcaatttcatcatcaataattcaattatcaacaagttaacata 12637  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 70691 - 70748
Alignment:
Q  36 atcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 92  Q
    |||||||||| |||||||||||| ||||||| | ||||||||| ||||||| ||||||    
T  70691 atcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcata 70748  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  296 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 353  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

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Target: scaffold1500 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 1463 - 1431
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  1463 atgattatgataataactaacccccttacctta 1431  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 1524 - 1492
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  1524 atgattatgataataactaacccccttacctta 1492  T

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Target: scaffold0498 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 9183 - 9215
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  9183 atgattatgataaagactaacccccttacctta 9215  T

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Target: scaffold0383 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 2700 - 2732
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    ||||||||||||| |||||||||||||||||||    
T  2700 atgattatgataataactaacccccttacctta 2732  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  12418 atgattatgataaagactaacccccttacctta 12450  T

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Target: scaffold0266 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 1430 - 1462
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  1430 atgattatgataaagactaacccccttacctta 1462  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 272330 - 272362
Alignment:
Q  280 atgattatgataaaaactaacccccttacctta 312  Q
    |||||||||||||| ||||||||||||||||||    
T  272330 atgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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