View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13184_low_12 (Length: 242)
Name: NF13184_low_12
Description: NF13184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13184_low_12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 45382441 - 45382200
Alignment:
| Q |
1 |
acaaagtttcctattaacatattatttggtattataaatcataacatattttggatgcataaaaaagtatatgaaataatgcaccttgttgctttagtta |
100 |
Q |
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| T |
45382441 |
acaaagtttcctattaacatattatttggtattataaatcataacatattttggatgcataaaaaagtatatgaaataatgcaccttgttgctttagtta |
45382342 |
T |
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| Q |
101 |
tgatctctttggtacaacgatctcggattatccaatctcttcgcattccattctttcctgctgcatccacccaagtatcgatttcaatttcttctcccct |
200 |
Q |
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| T |
45382341 |
tgatctctttggtacaacgatctcggattatccaatctcttcgcattccattctttcctgctgcatccacccaagtatcgatttcaatttcttctcccct |
45382242 |
T |
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| Q |
201 |
gtcaaatttatcgttttgtgtttacaactcacaaacaattat |
242 |
Q |
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| T |
45382241 |
gtcaaatttatcgttttgtgtttacaactcactaacaattat |
45382200 |
T |
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