View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13184_low_4 (Length: 411)

Name: NF13184_low_4
Description: NF13184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13184_low_4
NF13184_low_4
[»] chr7 (67 HSPs)
chr7 (272-395)||(21391495-21391628)
chr7 (271-395)||(6356776-6356910)
chr7 (272-352)||(33716600-33716680)
chr7 (271-350)||(6356297-6356376)
chr7 (271-387)||(6356598-6356724)
chr7 (271-387)||(10526322-10526448)
chr7 (271-352)||(10526668-10526749)
chr7 (271-352)||(35146710-35146791)
chr7 (271-351)||(1114065-1114145)
chr7 (272-352)||(7578884-7578964)
chr7 (271-387)||(21391201-21391327)
chr7 (271-394)||(41453311-41453444)
chr7 (272-387)||(44332832-44332957)
chr7 (271-393)||(35146996-35147128)
chr7 (272-352)||(4931631-4931711)
chr7 (282-387)||(36423682-36423797)
chr7 (272-352)||(41453017-41453097)
chr7 (271-387)||(8542510-8542636)
chr7 (271-350)||(19681506-19681585)
chr7 (271-350)||(36673986-36674065)
chr7 (271-387)||(48626074-48626200)
chr7 (271-394)||(8936860-8936993)
chr7 (271-352)||(8416496-8416577)
chr7 (271-352)||(16867718-16867799)
chr7 (271-352)||(31075551-31075632)
chr7 (271-352)||(31638301-31638382)
chr7 (272-352)||(1114403-1114483)
chr7 (272-352)||(6357123-6357203)
chr7 (272-352)||(8542856-8542936)
chr7 (284-352)||(17359205-17359273)
chr7 (272-352)||(28286129-28286209)
chr7 (272-352)||(41192043-41192123)
chr7 (272-352)||(41891978-41892058)
chr7 (272-352)||(43247427-43247507)
chr7 (271-350)||(4155609-4155688)
chr7 (271-350)||(19681855-19681934)
chr7 (282-353)||(41752007-41752078)
chr7 (271-387)||(48626376-48626502)
chr7 (272-387)||(8937162-8937287)
chr7 (272-387)||(17363551-17363674)
chr7 (271-352)||(7579230-7579311)
chr7 (269-387)||(7909295-7909423)
chr7 (271-352)||(17749946-17750027)
chr7 (272-352)||(28286475-28286555)
chr7 (271-350)||(34037271-34037350)
chr7 (282-352)||(7909524-7909594)
chr7 (271-353)||(41751661-41751743)
chr7 (271-352)||(31637954-31638035)
chr7 (272-352)||(36282798-36282878)
chr7 (282-352)||(28297841-28297911)
chr7 (271-352)||(8417294-8417375)
chr7 (279-352)||(36423388-36423461)
chr7 (271-346)||(29277707-29277782)
chr7 (272-346)||(29276887-29276961)
chr7 (274-387)||(28298132-28298255)
chr7 (282-387)||(41191704-41191819)
chr7 (284-352)||(27739022-27739090)
chr7 (282-341)||(36283574-36283634)
chr7 (271-346)||(36674095-36674168)
chr7 (293-350)||(32946701-32946758)
chr7 (284-337)||(41893448-41893501)
chr7 (288-352)||(33716941-33717005)
chr7 (284-335)||(28263520-28263571)
chr7 (271-320)||(36423790-36423839)
chr7 (271-341)||(43050395-43050465)
chr7 (271-340)||(4156559-4156628)
chr7 (284-352)||(28264646-28264714)
[»] chr3 (90 HSPs)
chr3 (271-352)||(54107913-54107994)
chr3 (271-387)||(10506261-10506387)
chr3 (271-352)||(54108260-54108341)
chr3 (272-352)||(27801501-27801581)
chr3 (272-352)||(39241370-39241450)
chr3 (272-387)||(4757806-4757931)
chr3 (272-387)||(5900736-5900861)
chr3 (271-352)||(22201974-22202055)
chr3 (271-352)||(24428925-24429006)
chr3 (271-352)||(26318540-26318621)
chr3 (271-352)||(39664195-39664276)
chr3 (272-352)||(5900435-5900515)
chr3 (271-387)||(47669270-47669396)
chr3 (269-352)||(53716303-53716386)
chr3 (272-387)||(1994181-1994306)
chr3 (272-387)||(1994481-1994606)
chr3 (272-387)||(1999340-1999465)
chr3 (270-352)||(15986592-15986674)
chr3 (271-394)||(21569051-21569184)
chr3 (271-352)||(12791534-12791615)
chr3 (271-352)||(26318193-26318274)
chr3 (271-352)||(28986499-28986580)
chr3 (271-352)||(32633423-32633504)
chr3 (271-352)||(44893751-44893832)
chr3 (271-352)||(51509130-51509211)
chr3 (272-352)||(18464468-18464548)
chr3 (271-387)||(8474159-8474285)
chr3 (271-387)||(10505959-10506085)
chr3 (271-350)||(18464816-18464895)
chr3 (271-387)||(27801802-27801928)
chr3 (271-387)||(42591795-42591921)
chr3 (271-350)||(44317575-44317654)
chr3 (271-387)||(47669572-47669698)
chr3 (271-350)||(53716653-53716732)
chr3 (271-394)||(21568757-21568890)
chr3 (271-394)||(45306843-45306976)
chr3 (271-352)||(4773254-4773335)
chr3 (271-352)||(11256461-11256542)
chr3 (271-352)||(16931964-16932045)
chr3 (271-352)||(24428578-24428659)
chr3 (272-394)||(39664490-39664622)
chr3 (271-352)||(44894098-44894179)
chr3 (271-352)||(45307050-45307131)
chr3 (272-352)||(4757506-4757586)
chr3 (272-352)||(16931618-16931698)
chr3 (272-352)||(22201628-22201708)
chr3 (274-387)||(46152629-46152752)
chr3 (272-352)||(47303374-47303454)
chr3 (273-352)||(7163463-7163542)
chr3 (273-352)||(12203909-12203988)
chr3 (271-350)||(13866031-13866110)
chr3 (273-352)||(28985522-28985601)
chr3 (271-387)||(29818188-29818314)
chr3 (271-387)||(29818490-29818616)
chr3 (271-350)||(49528160-49528239)
chr3 (271-387)||(54752476-54752602)
chr3 (282-352)||(8473868-8473938)
chr3 (271-394)||(15986246-15986379)
chr3 (282-352)||(19883598-19883668)
chr3 (272-387)||(42592097-42592222)
chr3 (271-352)||(4773600-4773681)
chr3 (271-336)||(15790690-15790755)
chr3 (271-352)||(21969640-21969721)
chr3 (271-352)||(21992076-21992157)
chr3 (273-352)||(7681481-7681561)
chr3 (282-387)||(12203573-12203688)
chr3 (271-352)||(54752174-54752255)
chr3 (273-352)||(39951370-39951449)
chr3 (272-387)||(22151857-22151982)
chr3 (298-352)||(41834964-41835018)
chr3 (271-352)||(11256114-11256195)
chr3 (272-394)||(47303031-47303163)
chr3 (271-346)||(30681781-30681856)
chr3 (271-352)||(20963583-20963664)
chr3 (271-352)||(41835284-41835365)
chr3 (272-352)||(15791467-15791542)
chr3 (271-352)||(22152203-22152286)
chr3 (272-352)||(43844393-43844473)
chr3 (288-352)||(46152968-46153032)
chr3 (285-394)||(51509425-51509543)
chr3 (272-352)||(21969987-21970069)
chr3 (272-352)||(21992423-21992505)
chr3 (271-346)||(42853257-42853331)
chr3 (272-346)||(30681041-30681115)
chr3 (284-341)||(43839984-43840041)
chr3 (284-341)||(13866969-13867026)
chr3 (284-341)||(49529125-49529182)
chr3 (284-335)||(44316651-44316702)
chr3 (351-387)||(39241671-39241707)
chr3 (141-193)||(42102045-42102097)
[»] chr5 (36 HSPs)
chr5 (272-352)||(9989335-9989415)
chr5 (271-387)||(38959036-38959162)
chr5 (271-352)||(38958735-38958816)
chr5 (271-352)||(1140123-1140204)
chr5 (271-352)||(25183011-25183092)
chr5 (271-352)||(35569786-35569867)
chr5 (271-352)||(36440558-36440639)
chr5 (271-352)||(39325423-39325504)
chr5 (272-387)||(27186186-27186311)
chr5 (271-352)||(24040096-24040177)
chr5 (272-352)||(39325713-39325793)
chr5 (271-352)||(16860314-16860395)
chr5 (272-394)||(27185886-27186017)
chr5 (272-352)||(2182955-2183035)
chr5 (284-352)||(11315982-11316050)
chr5 (288-352)||(11316312-11316376)
chr5 (271-350)||(19184608-19184687)
chr5 (271-387)||(37424273-37424399)
chr5 (271-387)||(37424578-37424703)
chr5 (271-352)||(32288089-32288170)
chr5 (271-352)||(36440211-36440292)
chr5 (282-387)||(9989636-9989751)
chr5 (272-352)||(24040445-24040525)
chr5 (271-350)||(32288436-32288515)
chr5 (282-352)||(2183301-2183371)
chr5 (272-352)||(34264706-34264790)
chr5 (271-346)||(31756666-31756741)
chr5 (271-329)||(19128434-19128492)
chr5 (284-350)||(25567348-25567414)
chr5 (282-335)||(33817659-33817712)
chr5 (303-352)||(34264405-34264454)
chr5 (272-352)||(35570138-35570218)
chr5 (271-341)||(19185553-19185623)
chr5 (282-352)||(29198974-29199044)
chr5 (22-55)||(20664171-20664204)
chr5 (145-217)||(28207130-28207202)
[»] chr1 (75 HSPs)
chr1 (272-352)||(8762757-8762837)
chr1 (271-394)||(44322966-44323099)
chr1 (272-387)||(49643683-49643808)
chr1 (272-352)||(1762686-1762766)
chr1 (272-352)||(16023909-16023989)
chr1 (272-352)||(23476699-23476779)
chr1 (271-387)||(12481372-12481498)
chr1 (271-352)||(27547680-27547761)
chr1 (272-352)||(16024255-16024335)
chr1 (271-351)||(20306013-20306093)
chr1 (271-387)||(12127068-12127194)
chr1 (271-350)||(35612442-35612521)
chr1 (272-387)||(12481071-12481196)
chr1 (272-387)||(45053002-45053127)
chr1 (271-352)||(1763032-1763113)
chr1 (271-352)||(26707207-26707288)
chr1 (271-352)||(27548027-27548108)
chr1 (271-352)||(37304039-37304120)
chr1 (271-352)||(38000500-38000581)
chr1 (271-352)||(49140154-49140235)
chr1 (272-352)||(46593589-46593668)
chr1 (271-387)||(49643983-49644109)
chr1 (272-387)||(23476353-23476478)
chr1 (272-387)||(31703926-31704051)
chr1 (271-352)||(3089353-3089434)
chr1 (271-352)||(4696893-4696974)
chr1 (271-352)||(6798165-6798246)
chr1 (271-352)||(23598083-23598164)
chr1 (271-352)||(37467578-37467659)
chr1 (271-352)||(37576539-37576620)
chr1 (272-352)||(2064569-2064649)
chr1 (272-352)||(37304386-37304466)
chr1 (272-352)||(45843475-45843555)
chr1 (271-350)||(8760283-8760362)
chr1 (271-350)||(9006202-9006281)
chr1 (271-387)||(25995795-25995921)
chr1 (271-350)||(38127720-38127799)
chr1 (282-352)||(34967080-34967150)
chr1 (272-341)||(5537173-5537242)
chr1 (271-387)||(9006504-9006629)
chr1 (271-352)||(35612093-35612174)
chr1 (271-352)||(39486213-39486294)
chr1 (271-339)||(10831142-10831210)
chr1 (272-352)||(10831944-10832024)
chr1 (272-352)||(37284740-37284820)
chr1 (271-346)||(13109191-13109266)
chr1 (271-346)||(37576192-37576267)
chr1 (271-387)||(49140456-49140581)
chr1 (271-352)||(4330195-4330276)
chr1 (271-352)||(26723159-26723240)
chr1 (271-352)||(34966314-34966395)
chr1 (271-352)||(45052701-45052782)
chr1 (272-352)||(37585705-37585785)
chr1 (287-346)||(4697163-4697222)
chr1 (271-346)||(32047754-32047829)
chr1 (271-350)||(37586053-37586132)
chr1 (272-352)||(6797819-6797899)
chr1 (272-352)||(37285085-37285165)
chr1 (282-352)||(12127411-12127484)
chr1 (271-346)||(13183777-13183852)
chr1 (272-340)||(5536410-5536478)
chr1 (306-387)||(31703660-31703751)
chr1 (271-346)||(28884028-28884103)
chr1 (279-350)||(39486552-39486623)
chr1 (274-352)||(20306360-20306438)
chr1 (272-346)||(28884787-28884861)
chr1 (271-333)||(46289335-46289397)
chr1 (271-352)||(46592823-46592904)
chr1 (288-340)||(49838756-49838808)
chr1 (272-346)||(32048546-32048620)
chr1 (306-352)||(49837417-49837463)
chr1 (289-341)||(37466831-37466883)
chr1 (141-194)||(26498055-26498108)
chr1 (152-193)||(43426185-43426226)
chr1 (284-324)||(52178880-52178920)
[»] scaffold0115 (2 HSPs)
scaffold0115 (271-387)||(22466-22592)
scaffold0115 (271-352)||(21523-21604)
[»] chr6 (66 HSPs)
chr6 (271-387)||(5938126-5938252)
chr6 (271-387)||(32753486-32753612)
chr6 (269-352)||(34891002-34891085)
chr6 (272-387)||(32993328-32993453)
chr6 (271-352)||(2517360-2517441)
chr6 (271-352)||(6137735-6137816)
chr6 (272-352)||(2517014-2517094)
chr6 (273-352)||(3423183-3423262)
chr6 (272-387)||(15932869-15932994)
chr6 (272-387)||(21856567-21856692)
chr6 (272-394)||(9046098-9046230)
chr6 (271-352)||(9046444-9046525)
chr6 (271-352)||(18053311-18053392)
chr6 (271-352)||(34994391-34994472)
chr6 (271-352)||(35167501-35167582)
chr6 (284-352)||(18052980-18053048)
chr6 (272-352)||(32753189-32753269)
chr6 (271-350)||(17244675-17244754)
chr6 (271-387)||(21856868-21856994)
chr6 (271-387)||(26957274-26957400)
chr6 (272-387)||(25176675-25176800)
chr6 (271-352)||(5311184-5311265)
chr6 (271-352)||(5937824-5937905)
chr6 (271-352)||(6137390-6137470)
chr6 (271-352)||(6532203-6532284)
chr6 (271-352)||(7270987-7271068)
chr6 (271-352)||(7438815-7438896)
chr6 (271-352)||(15932741-15932822)
chr6 (272-394)||(31237758-31237890)
chr6 (271-352)||(34994738-34994819)
chr6 (272-352)||(978427-978507)
chr6 (272-352)||(5639531-5639611)
chr6 (272-352)||(34517284-34517364)
chr6 (271-350)||(26600368-26600447)
chr6 (282-352)||(7269973-7270043)
chr6 (273-351)||(24744341-24744419)
chr6 (271-352)||(6235932-6236013)
chr6 (272-353)||(6236278-6236359)
chr6 (271-352)||(10412859-10412940)
chr6 (271-352)||(14276410-14276491)
chr6 (271-352)||(34518050-34518131)
chr6 (271-352)||(34890655-34890736)
chr6 (272-352)||(21540335-21540415)
chr6 (272-352)||(26600705-26600785)
chr6 (272-352)||(31247128-31247208)
chr6 (271-394)||(5310837-5310970)
chr6 (271-344)||(31238113-31238185)
chr6 (271-344)||(31247482-31247555)
chr6 (271-339)||(25180219-25180287)
chr6 (271-352)||(29260542-29260623)
chr6 (275-352)||(32993030-32993107)
chr6 (272-352)||(29261309-29261389)
chr6 (271-350)||(6228741-6228819)
chr6 (271-336)||(15286356-15286421)
chr6 (272-332)||(35167833-35167893)
chr6 (271-387)||(7270266-7270392)
chr6 (306-352)||(3035926-3035972)
chr6 (313-352)||(26957015-26957054)
chr6 (271-336)||(24744695-24744759)
chr6 (273-346)||(27829329-27829402)
chr6 (271-341)||(6229692-6229761)
chr6 (288-341)||(17245629-17245682)
chr6 (282-352)||(34251576-34251644)
chr6 (306-352)||(3423528-3423574)
chr6 (303-352)||(7270672-7270721)
chr6 (351-387)||(25176970-25177006)
[»] scaffold0220 (1 HSPs)
scaffold0220 (272-387)||(20763-20888)
[»] chr4 (83 HSPs)
chr4 (271-394)||(44991290-44991423)
chr4 (272-394)||(623985-624117)
chr4 (272-387)||(25269313-25269438)
chr4 (272-387)||(30683841-30683966)
chr4 (271-352)||(15477656-15477737)
chr4 (271-352)||(15478003-15478084)
chr4 (271-352)||(39448846-39448927)
chr4 (271-352)||(43566389-43566470)
chr4 (271-352)||(53751260-53751341)
chr4 (272-352)||(44957401-44957481)
chr4 (271-387)||(8591980-8592106)
chr4 (271-387)||(14985342-14985468)
chr4 (271-387)||(42855350-42855476)
chr4 (271-387)||(46849982-46850108)
chr4 (271-387)||(53750913-53751039)
chr4 (272-387)||(6505549-6505674)
chr4 (272-387)||(24898201-24898326)
chr4 (272-387)||(43734599-43734724)
chr4 (271-352)||(16038152-16038233)
chr4 (271-352)||(42855697-42855778)
chr4 (271-352)||(43734297-43734378)
chr4 (271-352)||(44991636-44991717)
chr4 (271-352)||(50769179-50769260)
chr4 (271-352)||(52557098-52557179)
chr4 (271-352)||(53259496-53259577)
chr4 (271-352)||(53995293-53995374)
chr4 (272-352)||(6711975-6712055)
chr4 (272-352)||(8592327-8592407)
chr4 (271-351)||(38339851-38339931)
chr4 (271-394)||(41877871-41878003)
chr4 (272-352)||(44125828-44125908)
chr4 (271-350)||(12817817-12817896)
chr4 (271-387)||(14985644-14985770)
chr4 (271-387)||(19088352-19088478)
chr4 (273-352)||(41752174-41752253)
chr4 (272-387)||(16037806-16037931)
chr4 (282-352)||(20888165-20888235)
chr4 (274-352)||(39448502-39448580)
chr4 (271-352)||(4513274-4513355)
chr4 (271-352)||(12818164-12818245)
chr4 (271-352)||(19088699-19088780)
chr4 (272-394)||(25181824-25181956)
chr4 (271-352)||(25182170-25182251)
chr4 (271-352)||(38339503-38339584)
chr4 (271-352)||(55022295-55022376)
chr4 (272-352)||(1433629-1433709)
chr4 (272-352)||(21763539-21763619)
chr4 (272-352)||(23756158-23756238)
chr4 (272-352)||(36122791-36122870)
chr4 (271-387)||(1433282-1433408)
chr4 (269-352)||(19508421-19508504)
chr4 (271-387)||(52557400-52557526)
chr4 (272-387)||(24898502-24898627)
chr4 (271-352)||(8398042-8398123)
chr4 (271-352)||(30683537-30683618)
chr4 (271-352)||(46849680-46849761)
chr4 (271-352)||(47602954-47603035)
chr4 (271-352)||(47603719-47603800)
chr4 (271-352)||(50768832-50768913)
chr4 (271-352)||(52692035-52692116)
chr4 (271-352)||(53994945-53995026)
chr4 (271-343)||(21763191-21763263)
chr4 (272-348)||(31214174-31214250)
chr4 (272-387)||(623691-623816)
chr4 (282-352)||(23755440-23755510)
chr4 (282-352)||(49135995-49136065)
chr4 (271-387)||(6712276-6712400)
chr4 (271-352)||(33091464-33091545)
chr4 (271-352)||(44957715-44957796)
chr4 (272-352)||(33091811-33091891)
chr4 (272-352)||(41878216-41878296)
chr4 (271-350)||(36122444-36122523)
chr4 (271-350)||(50508817-50508896)
chr4 (284-394)||(41751841-41751960)
chr4 (282-350)||(37206787-37206855)
chr4 (299-387)||(19508726-19508824)
chr4 (273-346)||(55022424-55022497)
chr4 (298-352)||(43566736-43566790)
chr4 (271-352)||(44125633-44125714)
chr4 (271-352)||(52692798-52692878)
chr4 (306-352)||(53259184-53259230)
chr4 (273-387)||(37206440-37206564)
chr4 (315-352)||(50508512-50508549)
[»] chr8 (52 HSPs)
chr8 (271-352)||(1651929-1652010)
chr8 (271-352)||(1740305-1740386)
chr8 (271-387)||(15048410-15048536)
chr8 (271-352)||(11173992-11174073)
chr8 (271-352)||(15048757-15048838)
chr8 (271-352)||(33819796-33819877)
chr8 (271-352)||(37569325-37569406)
chr8 (271-352)||(45276608-45276689)
chr8 (272-352)||(1432143-1432223)
chr8 (272-352)||(15871979-15872059)
chr8 (271-387)||(1739959-1740085)
chr8 (271-346)||(11920136-11920211)
chr8 (271-352)||(1646512-1646593)
chr8 (271-352)||(1646864-1646945)
chr8 (271-352)||(7535191-7535272)
chr8 (271-352)||(45276954-45277035)
chr8 (271-387)||(34470857-34470983)
chr8 (271-352)||(5435258-5435339)
chr8 (271-352)||(22763291-22763372)
chr8 (271-352)||(27473083-27473164)
chr8 (271-352)||(27473429-27473510)
chr8 (279-352)||(27669435-27669508)
chr8 (271-352)||(33296042-33296123)
chr8 (271-352)||(40660244-40660325)
chr8 (271-352)||(45077561-45077642)
chr8 (272-352)||(38588945-38589025)
chr8 (273-352)||(5152892-5152971)
chr8 (271-387)||(7949423-7949549)
chr8 (273-352)||(38588600-38588679)
chr8 (271-346)||(45077232-45077307)
chr8 (272-352)||(1870293-1870373)
chr8 (272-352)||(40659995-40660075)
chr8 (273-353)||(44594958-44595038)
chr8 (271-387)||(5434911-5435037)
chr8 (273-387)||(1869946-1870070)
chr8 (271-387)||(7534853-7534970)
chr8 (271-352)||(11707761-11707842)
chr8 (271-352)||(15871632-15871713)
chr8 (272-352)||(22762525-22762605)
chr8 (271-387)||(5152546-5152671)
chr8 (272-387)||(40048079-40048196)
chr8 (271-335)||(12643891-12643955)
chr8 (271-346)||(24666042-24666117)
chr8 (271-350)||(33295747-33295826)
chr8 (272-342)||(24652835-24652905)
chr8 (282-337)||(27669793-27669848)
chr8 (282-348)||(33819975-33820041)
chr8 (272-342)||(44594613-44594683)
chr8 (271-352)||(15740624-15740705)
chr8 (271-352)||(40048412-40048493)
chr8 (271-335)||(15741607-15741671)
chr8 (20-55)||(23663502-23663537)
[»] chr2 (52 HSPs)
chr2 (271-387)||(15744468-15744594)
chr2 (271-394)||(24138079-24138212)
chr2 (271-385)||(8173896-8174020)
chr2 (271-352)||(17032604-17032685)
chr2 (271-352)||(38333038-38333119)
chr2 (272-352)||(7495992-7496072)
chr2 (272-352)||(13193000-13193080)
chr2 (272-352)||(15405768-15405848)
chr2 (272-387)||(12860392-12860517)
chr2 (272-387)||(19815716-19815841)
chr2 (271-352)||(17050940-17051021)
chr2 (271-352)||(24371978-24372059)
chr2 (272-352)||(13193346-13193426)
chr2 (271-351)||(19816063-19816143)
chr2 (272-352)||(34735701-34735781)
chr2 (273-352)||(15406114-15406193)
chr2 (271-387)||(29472253-29472379)
chr2 (271-387)||(41474395-41474521)
chr2 (272-387)||(7496292-7496417)
chr2 (272-387)||(19847631-19847756)
chr2 (271-352)||(7469177-7469258)
chr2 (271-352)||(16305383-16305464)
chr2 (271-352)||(26181711-26181792)
chr2 (271-352)||(34735354-34735435)
chr2 (272-394)||(38332716-38332848)
chr2 (272-352)||(15744805-15744885)
chr2 (273-352)||(16305037-16305117)
chr2 (272-352)||(24372325-24372405)
chr2 (272-352)||(30898659-30898739)
chr2 (271-387)||(8174198-8174324)
chr2 (271-346)||(10991862-10991937)
chr2 (271-387)||(33470236-33470362)
chr2 (271-341)||(8962371-8962441)
chr2 (274-352)||(17052412-17052490)
chr2 (272-387)||(26182013-26182138)
chr2 (271-387)||(2147896-2148023)
chr2 (272-352)||(2148244-2148324)
chr2 (272-352)||(41474094-41474174)
chr2 (290-352)||(42834452-42834514)
chr2 (271-352)||(8444833-8444914)
chr2 (271-352)||(29472600-29472681)
chr2 (272-352)||(8963175-8963255)
chr2 (271-387)||(7469479-7469597)
chr2 (271-352)||(36713599-36713680)
chr2 (306-387)||(12860680-12860771)
chr2 (271-350)||(8445149-8445228)
chr2 (306-387)||(10992164-10992255)
chr2 (271-352)||(24138865-24138946)
chr2 (271-352)||(36713943-36714024)
chr2 (20-60)||(1821496-1821536)
chr2 (285-341)||(23992211-23992267)
chr2 (145-215)||(37132973-37133043)
[»] scaffold0029 (2 HSPs)
scaffold0029 (271-352)||(72773-72854)
scaffold0029 (272-387)||(73074-73199)
[»] scaffold0003 (4 HSPs)
scaffold0003 (271-394)||(349379-349511)
scaffold0003 (272-350)||(113405-113483)
scaffold0003 (272-352)||(349085-349165)
scaffold0003 (272-352)||(113724-113804)
[»] scaffold0037 (3 HSPs)
scaffold0037 (273-387)||(45769-45893)
scaffold0037 (282-352)||(56494-56564)
scaffold0037 (282-352)||(63619-63689)
[»] scaffold0134 (2 HSPs)
scaffold0134 (274-387)||(14149-14272)
scaffold0134 (271-387)||(14448-14574)
[»] scaffold0032 (3 HSPs)
scaffold0032 (271-387)||(81869-81995)
scaffold0032 (272-352)||(90796-90876)
scaffold0032 (351-387)||(82171-82207)
[»] scaffold0019 (2 HSPs)
scaffold0019 (271-387)||(50487-50613)
scaffold0019 (272-352)||(50834-50915)
[»] scaffold0186 (2 HSPs)
scaffold0186 (272-387)||(24475-24600)
scaffold0186 (271-352)||(24173-24254)
[»] scaffold0182 (2 HSPs)
scaffold0182 (271-352)||(19719-19800)
scaffold0182 (272-352)||(20066-20146)
[»] scaffold0221 (2 HSPs)
scaffold0221 (272-352)||(8786-8866)
scaffold0221 (271-352)||(8440-8520)
[»] scaffold0072 (2 HSPs)
scaffold0072 (272-352)||(15806-15886)
scaffold0072 (282-352)||(15475-15545)
[»] scaffold0340 (2 HSPs)
scaffold0340 (272-387)||(18285-18410)
scaffold0340 (272-350)||(18633-18711)
[»] scaffold0246 (2 HSPs)
scaffold0246 (284-352)||(6353-6420)
scaffold0246 (306-352)||(6044-6090)
[»] scaffold0225 (2 HSPs)
scaffold0225 (271-353)||(9793-9875)
scaffold0225 (271-352)||(10914-10995)
[»] scaffold0260 (1 HSPs)
scaffold0260 (299-352)||(14231-14283)
[»] scaffold0001 (2 HSPs)
scaffold0001 (282-341)||(144042-144101)
scaffold0001 (305-352)||(147198-147245)
[»] scaffold0117 (1 HSPs)
scaffold0117 (146-217)||(18292-18363)


Alignment Details
Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 272 - 395
Target Start/End: Complemental strand, 21391628 - 21391495
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||          |||||||||||    
T  21391628 tttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattaatttatttcggtcctctaagtttctcactcttactacatttagt 21391529  T
Q  362 ccttcctgttaattttattcaaataagtgttagt 395  Q
    |||| |||||| |||||||||||||| |||||||    
T  21391528 cctttctgttagttttattcaaataaatgttagt 21391495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 271 - 395
Target Start/End: Original strand, 6356776 - 6356910
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  6356776 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttttcaccgttactacatttag 6356875  T
Q  361 tccttcctgttaattttattcaaataagtgttagt 395  Q
    ||||| |||||| |||||||||||||| |||||||    
T  6356876 tcctttctgttagttttattcaaataaatgttagt 6356910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 33716600 - 33716680
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33716600 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 33716680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 6356297 - 6356376
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6356297 ctttttggtcatctaactatttaattggtatcggattggtcctctaattaaaaattgatttatttcggtcctctaagttt 6356376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 6356724 - 6356598
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  6356724 ctttttggtcctataactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 6356625  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  6356624 tcctttctgttagttttattcaaataa 6356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 10526322 - 10526448
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  10526322 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 10526421  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  10526422 tcctttctgttagttttattcaaataa 10526448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 10526749 - 10526668
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10526749 cttttttgtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 10526668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 35146710 - 35146791
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35146710 ctttttggtcctctaactatttagttagtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 35146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 271 - 351
Target Start/End: Original strand, 1114065 - 1114145
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 351  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1114065 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 1114145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 7578884 - 7578964
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7578884 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 7578964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 21391201 - 21391327
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  21391201 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgctactacatttag 21391300  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    || || |||||||||||||||||||||    
T  21391301 tcttttctgttaattttattcaaataa 21391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 271 - 394
Target Start/End: Complemental strand, 41453444 - 41453311
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||||||||    
T  41453444 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttctcaccgttactacatttag 41453345  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    || || |||||| |||||||||||||| ||||||    
T  41453344 tcatttctgttagttttattcaaataaatgttag 41453311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 44332957 - 44332832
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  44332957 tttttggtcctctaactatttaattggtatcaaattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 44332858  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  44332857 cctttctgttagttttattcaaataa 44332832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 35147128 - 35146996
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||          ||||||||||    
T  35147128 ctttttggtcctctaactatttaattggtattggattagtcctctaactaaaatttgatttatttcggtcctctaagtttcttaccgttactacatttag 35147029  T
Q  361 tccttcctgttaattttattcaaataagtgtta 393  Q
    ||||| |||||| |||||||||||||| |||||    
T  35147028 tcctttctgttagttttattcaaataaatgtta 35146996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 4931711 - 4931631
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4931711 tttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgaattatttcggtcctctaagtttct 4931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 36423797 - 36423682
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttagtccttcctgtt 371  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||    
T  36423797 tctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttattacatttagtcctttctgtt 36423698  T
Q  372 aattttattcaaataa 387  Q
    | ||||||||||||||    
T  36423697 agttttattcaaataa 36423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 41453017 - 41453097
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41453017 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 41453097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 8542510 - 8542636
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||          ||||||||||    
T  8542510 ctttttcgtcttctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcagtcctctaagtttctcaccgttactacatttag 8542609  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  8542610 tcctttctgttagttttattcaaataa 8542636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 19681506 - 19681585
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19681506 ctttttggtcctctaactatttagttggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 19681585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 36673986 - 36674065
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||| ||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36673986 ctttatggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 36674065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 48626074 - 48626200
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  48626074 ctttttggtcctctaactatttagttggtatcagattggttctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 48626173  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  48626174 tcctttctgttagttttattcaaataa 48626200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 8936860 - 8936993
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          ||||||||||    
T  8936860 ctttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcacttttactacatttag 8936959  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    || || |||||| |||||||||||||| ||||||    
T  8936960 tcatttctgttagttttattcaaataaatgttag 8936993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 8416496 - 8416577
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  8416496 ctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcccttaagtttct 8416577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 16867718 - 16867799
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16867718 ctttttggtcctctaactatataattggtatcagattggtcctctaactaaaaattgatttatttcagtcctctaagtttct 16867799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 31075632 - 31075551
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  31075632 ctttttggtcctctaactatttaattggtattggattggtcctccaattaaaaattgatttatttcggtcctctaagtttct 31075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 31638382 - 31638301
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  31638382 ctttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctttaaatttct 31638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 1114483 - 1114403
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1114483 tttttggtcctctaactatttagttgttatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 1114403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 6357203 - 6357123
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6357203 tttttgatcctctaattatttagttagtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 6357123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 8542936 - 8542856
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  8542936 tttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattgatttattttggtcctctaagtttct 8542856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 17359205 - 17359273
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17359205 taactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 17359273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 28286129 - 28286209
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28286129 tttttggtcttctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 28286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 41192123 - 41192043
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  41192123 tttttggtcctctaactatttaattggtatcggattagtcctctaagtaaaaattgatttatttcggtcatctaagtttct 41192043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 41891978 - 41892058
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  41891978 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttctttcggtcccttaagtttct 41892058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 43247427 - 43247507
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43247427 ttttttgtcctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 43247507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 4155609 - 4155688
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  4155609 ctttttggtcctctaactatttaattggtatcggtttgatcctctaactaaaaattgatttattttggtcctctaagttt 4155688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 19681934 - 19681855
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  19681934 ctttttggtcctctgactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagttt 19681855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 41752078 - 41752007
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 353  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41752078 tctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcagtcctctaagtttcta 41752007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 48626502 - 48626376
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| |||||||          ||||||||||    
T  48626502 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttattttggtcctttaagtttctgaccgttgctacatttag 48626403  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  48626402 tcctttctgttagttttattcaaataa 48626376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 8937287 - 8937162
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||          |||||||||||    
T  8937287 tttttggtcctctaactatttaattagtatcagatttgtcctctaattaaaagttgatttatttcggtcctctaagtttctcactgttactacatttagt 8937188  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  8937187 cctttctgttagttttattcaaataa 8937162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 17363674 - 17363551
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------ctacatttagtcc 363  Q
    ||||||||  ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||        ||||||||||||     
T  17363674 tttttggttctctaactatttaattggtattggatttgtcctctaactaaaaattgatttatttcggtcctttaagtttcaatgttactacatttagtca 17363575  T
Q  364 ttcctgttaattttattcaaataa 387  Q
    || |||||| ||||||||||||||    
T  17363574 tttctgttagttttattcaaataa 17363551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 7579311 - 7579230
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| |||||    
T  7579311 ctttttggtcttctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcgatcatctaattttct 7579230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 7909295 - 7909423
Alignment:
Q  269 tactttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacattt 358  Q
    |||||||| ||| | ||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||          ||||||||    
T  7909295 tacttttttgtcctttaactatttaattggtatcagattggttttctaactaaaaattgatttatttcggtcctctaagtttttcaccgttactacattt 7909394  T
Q  359 agtccttcctgttaattttattcaaataa 387  Q
    ||||||| |||||| ||||||||||||||    
T  7909395 agtcctttctgttagttttattcaaataa 7909423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 17749946 - 17750027
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||||||  |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17749946 ctttttggtcctctaactatttaattgatatcagattggttctctaactaaaaattaatttatttcggtcctctaagtttct 17750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 28286555 - 28286475
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  28286555 tttttggtcctctaactttttaattggtatcggattagtcctttaactaaaaattgattgatttcggtcctctaagtttct 28286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 34037350 - 34037271
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||  |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  34037350 ctttttggtcctctaactatttaattggtatatgattagtcctctgactaaaaattgatttatttcggtcctctaagttt 34037271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 7909594 - 7909524
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7909594 tctaactatttaattgatattggattggtcctctaactaaaaattgatttatttcggtcttctaagtttct 7909524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 41751661 - 41751743
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 353  Q
    |||||||||| | |||||||||||||  ||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  41751661 ctttttggtcctttaactatttaattgatattggattagtcctctaactaaaaattgacttatttcggtcctctaagtttcta 41751743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 31637954 - 31638035
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  || ||||||||||    
T  31637954 ctttttagtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcgaaccactaagtttct 31638035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 36282798 - 36282878
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||  |||||||||    
T  36282798 tttttagtcctctaactatttaattggtatcagattggtcctttaactaaaaattgatttatttcggtcccttaagtttct 36282878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 28297841 - 28297911
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  28297841 tctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcagttctctaagtttct 28297911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 8417375 - 8417294
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||| |||||||||||| |||||||| |||||  |||||||||    
T  8417375 ctttttggtcctctaactatttaattggtatcagattggtcctttaactaaaaattaatttattttggtcccttaagtttct 8417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 36423388 - 36423461
Alignment:
Q  279 tcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||| | ||  ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  36423388 tcatctaactatttaattggcattagattggtcctctaactaaaaattaatttattttggtcctctaagtttct 36423461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 29277782 - 29277707
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| |||||||||||| || ||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  29277782 ctttttggtcctctaactatttatttggtaacggtttggtcctctaactaaaaaatgatttattttggtcctctaa 29277707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 29276887 - 29276961
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    ||||||||| ||||||||||||||| ||| ||| |||||||||||| |||||| |||||||||| ||||||||||    
T  29276887 tttttggtcctctaactatttaattggtaacggtttggtcctctaattaaaaaatgatttattttggtcctctaa 29276961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 28298255 - 28298132
Alignment:
Q  274 tttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtcc 363  Q
    |||| |||||||||||||||||| ||||| ||||   ||||||| ||||||||||||||||||| | ||||||||||          ||||||||||||     
T  28298255 tttgatcatctaactatttaattggtatcagatttaccctctaattaaaaattgatttatttcgattctctaagtttctcaccgttactacatttagtca 28298156  T
Q  364 ttcctgttaattttattcaaataa 387  Q
    || |||||||||||||||||||||    
T  28298155 tttctgttaattttattcaaataa 28298132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41191704 - 41191819
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgtt 371  Q
    |||||||||||| ||  ||| ||||||||||||||||||||||||| |||||||| || ||||||||||          ||||||||||||||| |||||    
T  41191704 tctaactatttagttgatattggattggtcctctaactaaaaattggtttatttcagttctctaagtttctcaccgttactacatttagtcctttctgtt 41191803  T
Q  372 aattttattcaaataa 387  Q
    | ||||||||||||||    
T  41191804 agttttattcaaataa 41191819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 27739090 - 27739022
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| || ||||| ||||| ||| ||||||||||||||||||||||||||||| | |||||||    
T  27739090 taactatttatttggtatcagattgatcccctaactaaaaattgatttatttcggtccttttagtttct 27739022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 36283634 - 36283574
Alignment:
Q  282 tctaactatttaatttgtatcggattgg-tcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||    
T  36283634 tctaactatttaattggtatcggatttgatcctctaactaaaaattgatttatttccgtcc 36283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 36674168 - 36674095
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||| ||||||||||| ||||||| || ||| |  |||||||||||||||||||||||||||||||    
T  36674168 ctttttggtcctctgactatttaattggtatcgggttagtctt--aactaaaaattgatttatttcggtcctctaa 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 32946758 - 32946701
Alignment:
Q  293 aatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||  |||||||||    
T  32946758 aattggtatcagattggtactctaactaaaaattgatttatttcggttttctaagttt 32946701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 41893501 - 41893448
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcg 337  Q
    |||||||||||||  ||||||||||||| |||||||||||||| ||||||||||    
T  41893501 taactatttaattaatatcggattggtcatctaactaaaaatttatttatttcg 41893448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 33717005 - 33716941
Alignment:
Q  288 tatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||  |||||||||| || |||||||||||||| ||||||||||||| | |||||||||    
T  33717005 tatttaattgatatcggattgatcatctaactaaaaattaatttatttcggtcatttaagtttct 33716941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 28263520 - 28263571
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttattt 335  Q
    ||||||||||||| ||||||| ||||||| |||||||||| |||||||||||    
T  28263520 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattt 28263571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 36423839 - 36423790
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaacta 320  Q
    |||||||||| ||||||||||||||| |||| ||||| ||||||||||||    
T  36423839 ctttttggtcctctaactatttaattggtattggatttgtcctctaacta 36423790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 43050395 - 43050465
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||   |||||||||||||  ||| || ||||||| |||| ||||||||||||||||| |||||    
T  43050395 ctttttggtcccttaactatttaattaatattggtttggtcccctaattaaaaattgatttattttggtcc 43050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 4156628 - 4156559
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtc 340  Q
    ||||||||||   ||||||||||||| ||||| | ||||| | |||||||||| ||||||||||| ||||    
T  4156628 ctttttggtcccttaactatttaattagtatctgtttggtaccctaactaaaatttgatttattttggtc 4156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 28264714 - 28264646
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||| |||||   |||||| | ||||||||| ||||||||||| |||||  |||||||||    
T  28264714 taactatttaattagtatcaatttggtcttttaactaaaatttgatttattttggtcccttaagtttct 28264646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 54107913 - 54107994
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54107913 ctttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 54107994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 10506387 - 10506261
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  10506387 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 10506288  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  10506287 tcctttctgttagttttattcaaataa 10506261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 54108341 - 54108260
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54108341 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 54108260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 27801501 - 27801581
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27801501 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27801581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 39241370 - 39241450
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39241370 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 39241450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 4757931 - 4757806
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  4757931 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 4757832  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  4757831 cctttctgttagttttattcaaataa 4757806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 5900861 - 5900736
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  5900861 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 5900762  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  5900761 cctttctgttagttttattcaaataa 5900736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 22202055 - 22201974
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22202055 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 22201974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 24429006 - 24428925
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24429006 ctttttggtcatctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcttctaagtttct 24428925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 26318621 - 26318540
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26318621 ctttttggtcatctaactatttaattggtatcggattaatcctctaactaaaaattgatttatttcggtcctctaagtttct 26318540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 39664195 - 39664276
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39664195 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaaatgatttatttcggtcctctaagtttct 39664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 5900435 - 5900515
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5900435 tttttggtcatctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 5900515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 47669270 - 47669396
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||          ||||||||||    
T  47669270 ctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattaatttatttcggtcctctaagtttctcaccgttactacatttag 47669369  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  47669370 tcctttctgttagttttattcaaataa 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 352
Target Start/End: Original strand, 53716303 - 53716386
Alignment:
Q  269 tactttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53716303 tacttttttgtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 53716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 1994181 - 1994306
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  1994181 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttgctacatttagt 1994280  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  1994281 cctttctgttagttttattcaaataa 1994306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 1994606 - 1994481
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  1994606 tttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttagt 1994507  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  1994506 cctttctgttatttttattcaaataa 1994481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 1999340 - 1999465
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  1999340 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttgctacatttagt 1999439  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  1999440 cctttctgttagttttattcaaataa 1999465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 15986674 - 15986592
Alignment:
Q  270 actttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15986674 actttttggtcctctaattatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 15986592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 271 - 394
Target Start/End: Complemental strand, 21569184 - 21569051
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||          ||||||||||    
T  21569184 ctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcgatcctctaagtttctcaccgttactacatttag 21569085  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    || || |||||| |||||||||||||| ||||||    
T  21569084 tcttttctgttagttttattcaaataaatgttag 21569051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 12791615 - 12791534
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  12791615 ctttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaattgatttatttcggtcctctaaatttct 12791534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 26318193 - 26318274
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26318193 ctttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 26318274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 28986580 - 28986499
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28986580 ctttttggtcctctaattatttaattggtatcggattggtcctttaactaaaaattgatttatttcggtcctctaagtttct 28986499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 32633504 - 32633423
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32633504 ctttttggtcctctaactatttaattgttatcggattggtcctttaactaaaaattgatttatttcggtcctctaagtttct 32633423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 44893751 - 44893832
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44893751 ctttttggttctctaactatttaattggtatcggattggtcttctaactaaaaattgatttatttcggtcctctaagtttct 44893832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 51509130 - 51509211
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51509130 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 51509211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 18464468 - 18464548
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18464468 tttttgctcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 18464548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 8474285 - 8474159
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||          ||||||||||    
T  8474285 ctttttggtcctctaactatttaattggtatcgaattagtcctctaattaaaaattgatttatttcggtcctctaagtttatgaccgttactacatttag 8474186  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  8474185 tcctttctgttagttttattcaaataa 8474159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 10505959 - 10506085
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||          ||||||||||    
T  10505959 ctttttggtcctctaactatttaattggtatcagattagtcctttaactaaaaattgatttatttcggtcctctaagtttctcaccattactacatttag 10506058  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  10506059 tcctttctgttagttttattcaaataa 10506085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 18464895 - 18464816
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18464895 ctttttggtcctctaactatttaattggtatcgaattggtcttctaactaaaaattgatttatttcggtcctctaagttt 18464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 27801928 - 27801802
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| |||||||||||||||||||||||||          ||||||||||    
T  27801928 ctttttggtcctctaactatttaattggtatcgaattggtcctctaattaaaaaatgatttatttcggtcctctaagtttctcactgttactacatttag 27801829  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  27801828 tcctttctgttagttttattcaaataa 27801802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 42591795 - 42591921
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| |||||||||          ||||||||||    
T  42591795 ctttttggtcctctaactatttaatcggtatcggatttgtcctctaactaaaaattgatttatttcggtcttctaagtttctcactgttactacatttag 42591894  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  42591895 tcctttctgttagttttattcaaataa 42591921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 44317654 - 44317575
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  44317654 ctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctctaagttt 44317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 47669698 - 47669572
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||          ||||||||||    
T  47669698 ctttttggtcctctaactatttatttggtatcggattggttctctaactaaaaattaatttatttcggtcctctaagtttctcaccgttactacatttag 47669599  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  47669598 tccttactgttagttttattcaaataa 47669572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 53716732 - 53716653
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  53716732 ctttttggtcatctaactatttaattggtatcagattggtcttctaactaaaaattgatttatttcggtcctttaagttt 53716653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 21568757 - 21568890
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||          ||||||||||    
T  21568757 ctttttgatcctctaactatttaattggtatcggattgatcctctaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 21568856  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    || || |||||| |||||||||||||| ||||||    
T  21568857 tcatttctgttagttttattcaaataaatgttag 21568890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 45306843 - 45306976
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||          ||| ||||||    
T  45306843 ctttttgatcctctaactatttaattggtatcggattagtcctctaactaaaatttgatttatttcggtcctctaagtttctcactgttactatatttag 45306942  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    ||||| |||||| |||||||||||||| ||||||    
T  45306943 tcctttctgttagttttattcaaataaatgttag 45306976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 4773254 - 4773335
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  4773254 ctttttggtcctctaactatttaattggtatcagattgatcctctaattaaaaattgatttatttcggtcctctaagtttct 4773335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 11256542 - 11256461
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  11256542 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaaatgatttatttcggtcctttaagtttct 11256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 16932045 - 16931964
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  16932045 ctttttggtcctctaactttttaattggtatcggatttgtcctctaactaaaaattgatttatttctgtcctctaagtttct 16931964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 24428578 - 24428659
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24428578 ctttttggtcctctaactattcaattggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 24428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 394
Target Start/End: Complemental strand, 39664622 - 39664490
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||          |||||||||||    
T  39664622 tttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattaatttatttcggtcctctaagtttctcaccgttactacatttagt 39664523  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    | || |||||| |||||||||||||| ||||||    
T  39664522 cttttctgttagttttattcaaataaatgttag 39664490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 44894179 - 44894098
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  44894179 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggacctctaagtttct 44894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 45307131 - 45307050
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45307131 ctttttggtcctctaactatttagttggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 45307050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 4757506 - 4757586
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || | |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4757506 tttttggtcctctaactatttagttggaatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 4757586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 16931618 - 16931698
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16931618 tttttggtcctctaactatttaatttggtacggattggtgctctaactaaaaattgatttatttcggtcctctaagtttct 16931698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 22201628 - 22201708
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  22201628 tttttggtcctctaactatttaattggtatcggattgatcctctaaataaaaattgatttatttctgtcctctaagtttct 22201708  T

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Target: chr3; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 387
Target Start/End: Original strand, 46152629 - 46152752
Alignment:
Q  274 tttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtcc 363  Q
    ||||||| ||||||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||    
T  46152629 tttggtcctctaactatttaattggcatcgaattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccatcactacatttagtcc 46152728  T
Q  364 ttcctgttaattttattcaaataa 387  Q
    || |||||| ||||||||||||||    
T  46152729 tttctgttagttttattcaaataa 46152752  T

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Target: chr3; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 47303454 - 47303374
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  47303454 tttttggtcctctaactatttaattggtatcggattggtcctctaagtaaaaattgatttattttggtcctttaagtttct 47303374  T

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Target: chr3; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 7163463 - 7163542
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| ||||||||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  7163463 ttttggtcctctaactatttaattggtattggattggtcatctaactaaaaattaatttatttcggtcctctaagtttct 7163542  T

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Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 12203988 - 12203909
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||  |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  12203988 ttttggtcccctaactatttaattggtatcggattgatcctctaattaaaaattgatttatttcggtcctctaagtttct 12203909  T

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Target: chr3; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 13866031 - 13866110
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  13866031 ctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctttaagttt 13866110  T

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Target: chr3; HSP #52
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 28985522 - 28985601
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28985522 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaatttgatttatttcggtcctataagtttct 28985601  T

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Target: chr3; HSP #53
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 29818188 - 29818314
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||          ||||||||||    
T  29818188 ctttttggtcctctaactatttaattggtatcagattagtcctctaaataaaaattgatttatttcgatcctctaagtttctcactgttactacatttag 29818287  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  29818288 tcctttctgttagttttattcaaataa 29818314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 29818616 - 29818490
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||          ||||||||||    
T  29818616 ctttttgatcttctaattatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttactacatttag 29818517  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  29818516 tcctttctgttagttttattcaaataa 29818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 49528160 - 49528239
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  49528160 ctttttggtcctctaactatttaattggtatcggtttggtcctctagctaaaaattgatttattttggtcctctaagttt 49528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 54752602 - 54752476
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||          ||||||||||    
T  54752602 ctttttggtcctctaactatttagttggtatcagattggttctctaactaaaaattgatttatttcggtgctctaagtttctcatcgttactacatttag 54752503  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  54752502 tcctttctgttagttttattcaaataa 54752476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 8473868 - 8473938
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8473868 tctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtactctaagtttct 8473938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 15986246 - 15986379
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || ||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||          || |||||||    
T  15986246 ctttttgatcctctaactatttaattggtatcggattagtcccctagctaaaaattgatttatttcggtcctctaagtttctcaccgttactgcatttag 15986345  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    ||||| |||||| |||||||||||||| ||||||    
T  15986346 tcctttctgttagttttattcaaataaatgttag 15986379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 19883668 - 19883598
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  19883668 tctaactatttaattggtatcggattggttctctaactaaaaaatgatttatttcggtcctctaagtttct 19883598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 42592222 - 42592097
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||  ||||||||||||||||||||||||||||||||| ||||||||||||          |||||||||||    
T  42592222 tttttggtcctctaactatttagttggtatcaaattggtcctctaactaaaaattgatttatttcgatcctctaagtttctcaccgttactacatttagt 42592123  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  42592122 cctttctgttagttttattcaaataa 42592097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 4773681 - 4773600
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  4773681 ctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttattttggtcttctaagtttct 4773600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 15790690 - 15790755
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttc 336  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15790690 ctttttggtcatctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttc 15790755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 21969640 - 21969721
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  21969640 ctttttggtcctctaactatttaattggtaacagattagtcctctaactaaaaattgatttatttcggtcttctaagtttct 21969721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 21992076 - 21992157
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  21992076 ctttttggtcctctaactatttaattggtaacagattagtcctctaactaaaaattgatttatttcggtcttctaagtttct 21992157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 7681561 - 7681481
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcc-tctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| ||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  7681561 ttttggtcctctaattatttaattggtatcggattagtccctctaactaaaaattgatttatttcggtcctctaagtttct 7681481  T

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Target: chr3; HSP #66
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 12203573 - 12203688
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgtt 371  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||||||||||          |||||||||||| || |||||    
T  12203573 tctaactatttaattggtatcggattggtcatctaactaaaaattggtatatttcggtcctctaagtttctcactgttactacatttagtcttttctgtt 12203672  T
Q  372 aattttattcaaataa 387  Q
    ||||||||||||||||    
T  12203673 aattttattcaaataa 12203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 54752174 - 54752255
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||| | |||||||||    
T  54752174 ctttttggtcctctaactatttaattggtataagattggtcctgtaactaaaaattgatttatttcggtcatataagtttct 54752255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 39951370 - 39951449
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| |||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||    
T  39951370 ttttgatcatctgactatttaattggtatcggattagtcctctaattaaaaattgatttatttcgatcctttaagtttct 39951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 22151857 - 22151982
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| | ||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||  |||||||||          |||||||||||    
T  22151857 tttttggtcctataactatttaattggtaacagattagtcctctaactaaaaattgatttatttcggttttctaagtttctcaccgttactacatttagt 22151956  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    ||||  ||||||||||||||||||||    
T  22151957 cctttttgttaattttattcaaataa 22151982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 41834964 - 41835018
Alignment:
Q  298 gtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41834964 gtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 41835018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 11256114 - 11256195
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||| |||| |||||||||    
T  11256114 ctttttagtcctctaactatttaattggtatcggattgatcctctaactaaaaaataatttatttcgatcctttaagtttct 11256195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 47303031 - 47303163
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    |||||| |||||||||||||||||| |||| | ||  ||||||||| |||||||| |||||||||||||||||||||||          |||||||||||    
T  47303031 tttttgatcatctaactatttaattggtattgaatcagtcctctaattaaaaattaatttatttcggtcctctaagtttctcaccgttactacatttagt 47303130  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    | || |||||| |||||||||||||| ||||||    
T  47303131 catttctgttagttttattcaaataaatgttag 47303163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 30681856 - 30681781
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||||||||||||| ||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  30681856 ctttttggtcctctaactatttaattggtaacagtttggtcctctaactaaaaaatgatttattttggtcctctaa 30681781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 20963664 - 20963583
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||   ||||||||||||| ||||||| ||| |||||||||||||| ||||||||||| |||||| |||||||||    
T  20963664 ctttttggtcccttaactatttaattagtatcggtttgatcctctaactaaaatttgatttattttggtcctttaagtttct 20963583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 41835365 - 41835284
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||||||  ||| | ||| || || ||| ||||||||||||||||||||||||||||||||||    
T  41835365 ctttttggtcctctaactatttaattgatattgaattagttctttaattaaaaattgatttatttcggtcctctaagtttct 41835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 15791542 - 15791467
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||     ||||||||||||||||||||||||||||||  |||||||||    
T  15791542 tttttggtcctctaactatttaattggtatcggat-----ctctaactaaaaattgatttatttcggtcccttaagtttct 15791467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 22152286 - 22152203
Alignment:
Q  271 ctttttggtcatctaactat--ttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||  ||| || ||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  22152286 ctttttggtcctctaactatatttagttggtatcagattgatcctctaactaaaaattgatttatttcagtcctctgagtttct 22152203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 43844473 - 43844393
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| | ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  43844473 tttttggtcctttaactatttaattagtatcggtttggtcccctaactaaaaattgatttatttttgtcctttaaatttct 43844393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 46153032 - 46152968
Alignment:
Q  288 tatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  46153032 tatttagttggtatcgaattggttctctaactaaaaattgatttatttcggtcctataagtttct 46152968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 394
Target Start/End: Complemental strand, 51509543 - 51509425
Alignment:
Q  285 aactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaat 374  Q
    |||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||| |||||||||          |||||||||||| || |||||| |    
T  51509543 aactatttaattggtattggattagtc-tctaactaaaaattgatttatttcggtcatctaagtttctcactgttactacatttagtcttttctgttagt 51509445  T
Q  375 tttattcaaataagtgttag 394  Q
    ||||||||||||| ||||||    
T  51509444 tttattcaaataaatgttag 51509425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 21970069 - 21969987
Alignment:
Q  272 tttttggtcatctaactat--ttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||  ||| || ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  21970069 tttttggtcctctaactatatttagttggtatcagattggtcctctaactaaaaattcatttatttcagtcctctgagtttct 21969987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 21992505 - 21992423
Alignment:
Q  272 tttttggtcatctaactat--ttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||  ||| || ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  21992505 tttttggtcctctaactatatttagttggtatcagattggtcctctaactaaaaattcatttatttcagtcctctgagtttct 21992423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 42853257 - 42853331
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| |||| ||||||| || ||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  42853257 ctttttggtc-tctatctatttagttggtatcggattggttctctaactaaaaattgatttatgtgggtcctctaa 42853331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 30681041 - 30681115
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    ||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||   |||||||| ||||||||||    
T  30681041 tttttggtcatctaactatttaattggtaacggtttggttctctaactaaaaaaatatttattttggtcctctaa 30681115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 43839984 - 43840041
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||    
T  43839984 taactatttaattagtatcggtttgatcctctaactaaaaattgatttattttggtcc 43840041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 13867026 - 13866969
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||    
T  13867026 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 13866969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 49529182 - 49529125
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||    
T  49529182 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 49529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 44316651 - 44316702
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttattt 335  Q
    ||||||||||||| ||||||| || |||| |||||||||| |||||||||||    
T  44316651 taactatttaattagtatcggtttagtcccctaactaaaatttgatttattt 44316702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 39241707 - 39241671
Alignment:
Q  351 ctacatttagtccttcctgttaattttattcaaataa 387  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  39241707 ctacatttagtcctttctgttagttttattcaaataa 39241671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 42102045 - 42102097
Alignment:
Q  141 gtcatcgtgaccttagctcagttggaagggacaatataaaaaatatgtaaggt 193  Q
    |||||||||| || ||||||||||| ||||||||| || || |||||||||||    
T  42102045 gtcatcgtgagctcagctcagttggcagggacaatgtataatatatgtaaggt 42102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 9989335 - 9989415
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9989335 tttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 9989415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 38959162 - 38959036
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  38959162 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 38959063  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    |||||  ||||||||||||||||||||    
T  38959062 tcctttttgttaattttattcaaataa 38959036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 38958735 - 38958816
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38958735 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 38958816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 1140204 - 1140123
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1140204 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1140123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 25183092 - 25183011
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25183092 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagcttct 25183011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 35569786 - 35569867
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35569786 ctttttggtcttctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 35569867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 36440639 - 36440558
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36440639 ctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 36440558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 39325423 - 39325504
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39325423 ctttttggtcctctgactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 39325504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 27186311 - 27186186
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||          |||||||||||    
T  27186311 tttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcagtcctctaagtttctcactgttactacatttagt 27186212  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  27186211 cctttctgttagttttattcaaataa 27186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 24040096 - 24040177
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24040096 ctttttggtcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtccactaagtttct 24040177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 39325793 - 39325713
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39325793 tttttagtcctctaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 39325713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 16860314 - 16860395
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16860314 ctttttggtcctctaactatttaatcggtatcagattggtcctctaactaaaaattgatttatttcggtcctttaagtttct 16860395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 27185886 - 27186017
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  27185886 tttttggtcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttattttggtcctctaagtttctcacttttactacatttagt 27185985  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    |||||||| || |||||||||||||| ||||||    
T  27185986 ccttcctg-tagttttattcaaataaatgttag 27186017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 2182955 - 2183035
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  2182955 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttatgtcgtctaagtttct 2183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 11315982 - 11316050
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11315982 taactatttaattggtatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 11316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 11316376 - 11316312
Alignment:
Q  288 tatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11316376 tatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 11316312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 19184608 - 19184687
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  19184608 ctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctttaagttt 19184687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 37424273 - 37424399
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||          ||||||||||    
T  37424273 ctttttgatcctctaactatttatttggtatcagattggtcctctaactaaaaattgatttatttcggtcttctaagtttctcactgttactacatttag 37424372  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  37424373 tcctttctgttagttttattcaaataa 37424399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 37424703 - 37424578
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||          ||||||||||    
T  37424703 ctttttggtcctctaactatttaatt-gtattggattagtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttag 37424605  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  37424604 tcctttctgttagttttattcaaataa 37424578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 32288089 - 32288170
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  32288089 ctttttggtcctctaactatttaattggtattagattggtcatctaactaaaaattgatttatttcggtcatctaagtttct 32288170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 36440211 - 36440292
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || |||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36440211 ctttttgatcctctaactatttagttggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 36440292  T

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Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 9989751 - 9989636
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgtt 371  Q
    |||| |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||          ||||||||||||||| |||||    
T  9989751 tctacctatttaattggtatcggattgatcttctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttagtcctttctgtt 9989652  T
Q  372 aattttattcaaataa 387  Q
    | ||||||||||||||    
T  9989651 agttttattcaaataa 9989636  T

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Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 24040525 - 24040445
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||    
T  24040525 tttttggtcctctaactatttaattagtatcggattgatcctctaactaaaaattgacttatttcagtcctttaagtttct 24040445  T

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Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 32288515 - 32288436
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    ||||||| || |||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  32288515 ctttttgatcctctaactatttaattgatattagattggtcctctaactaaaaattgatttatttcggtcctctaagttt 32288436  T

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Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 2183371 - 2183301
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| || |||||||||    
T  2183371 tctaactatttaattggtatcggattgatcctttaactaaaaattgatttatttcggttctgtaagtttct 2183301  T

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Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 34264790 - 34264706
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgat----ttatttcggtcctctaagtttct 352  Q
    ||||||||| || |||||||||||| |||| | |||||||||||||||||||||||||    |||||||||||||||||||||||    
T  34264790 tttttggtcctccaactatttaattggtattgaattggtcctctaactaaaaattgatttaattatttcggtcctctaagtttct 34264706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 31756741 - 31756666
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    ||||||||||  |||||||||||||| ||| ||| || |||||||||||||||| |||||||||| ||||||||||    
T  31756741 ctttttggtctcctaactatttaattggtaacggtttagtcctctaactaaaaaatgatttattttggtcctctaa 31756666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 19128492 - 19128434
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgat 329  Q
    |||||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  19128492 ctttttggtcctctaactatttaattagtatcagattgatcctctaactaaaaattgat 19128434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 25567414 - 25567348
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||||| | |||| |||||||    
T  25567414 taactatttaattggtatcggattggttctttaactaaaaattgatttattttgatcctttaagttt 25567348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 33817712 - 33817659
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttattt 335  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  33817712 tctaactatttaattggtatcggattgatcctctaactaaaaatttatttattt 33817659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 34264405 - 34264454
Alignment:
Q  303 ggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  34264405 ggattggccctctaactaaaaattgatttatttcgatcctctaagtttct 34264454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 35570218 - 35570138
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| ||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||  ||| |||||||||||    
T  35570218 ttttttgtcctctaactatttaattggtatttgattactcctctaactaaaaattgatttattttagtcttctaagtttct 35570138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 19185623 - 19185553
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||   ||||||||||||| |||| || ||||||| |||||||||| ||||||||||| |||||    
T  19185623 ctttttggtcccttaactatttaattagtattggtttggtcccctaactaaaatttgatttattttggtcc 19185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 29198974 - 29199044
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||  |||   ||| ||||||||| ||||||||||||||||||| | || |||||||||    
T  29198974 tctaactatttaattgatattaaattagtcctctaattaaaaattgatttatttcgattctttaagtttct 29199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 20664204 - 20664171
Alignment:
Q  22 gttaactttggagttgtctttatataatggtata 55  Q
    |||||||||||||||| |||||||||||||||||    
T  20664204 gttaactttggagttgcctttatataatggtata 20664171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 28207130 - 28207202
Alignment:
Q  145 tcgtgaccttagctcagttggaagggacaatataaaaaatatgtaaggtcaatggttcgaattccggccacca 217  Q
    |||||| |||||||||||||| | |||||||  | |||||||| ||||||   ||||||||| ||||||||||    
T  28207130 tcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcgaatcccggccacca 28207202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 8762837 - 8762757
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8762837 tttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 8762757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 394
Target Start/End: Complemental strand, 44323099 - 44322966
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  44323099 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 44323000  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    || || |||||| |||||||||||||| ||||||    
T  44322999 tcatttctgttagttttattcaaataaatgttag 44322966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 49643683 - 49643808
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  49643683 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttagt 49643782  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  49643783 cctttctgttagttttattcaaataa 49643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 1762686 - 1762766
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1762686 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1762766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 16023909 - 16023989
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16023909 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 16023989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 23476779 - 23476699
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23476779 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 23476699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 12481498 - 12481372
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  12481498 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 12481399  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  12481398 tcctttctgttagttttattcaaataa 12481372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 27547680 - 27547761
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27547680 ctttttggtcttttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27547761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 16024335 - 16024255
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16024335 tttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 16024255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 271 - 351
Target Start/End: Original strand, 20306013 - 20306093
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 351  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20306013 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggttctctaagtttc 20306093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 12127068 - 12127194
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gtttctacatttag 360  Q
    |||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  12127068 ctttttggtcctctaactatttagttggtatcggattggttctctaactaaaaattgatttatttcggtcctctaagtttctcaccgtttctacatttag 12127167  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  12127168 tcctttctgttagttttattcaaataa 12127194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 35612521 - 35612442
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35612521 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcagtcctctaagttt 35612442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 12481071 - 12481196
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  12481071 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttagt 12481170  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  12481171 cctttctgttagttttattcaaataa 12481196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 45053127 - 45053002
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||          |||||||||||    
T  45053127 tttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcatctaagtttctcagtgttactacatttagt 45053028  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  45053027 cctttctgttagttttattcaaataa 45053002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 1763113 - 1763032
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1763113 ctttttggtcctctaactatttaattggtatcaaattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1763032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 26707207 - 26707288
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26707207 ctttttggtcctctaactatttaattggtatcagatcggtcctctaactaaaaattgatttatttcggtcctctaagtttct 26707288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 27548108 - 27548027
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27548108 cttttttgtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27548027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 37304039 - 37304120
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37304039 ctttttggtcctctaaccatttaattggtatcggattggtcctctaactaaaaattgatttatttcagtcctctaagtttct 37304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 38000500 - 38000581
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  38000500 ctttttggtcctctaactatttaattggtatcggattggtcttctaattaaaaattgatttatttcggtcctctaagtttct 38000581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 49140154 - 49140235
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49140154 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 49140235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 46593668 - 46593589
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46593668 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcct-taagtttct 46593589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 49644109 - 49643983
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||||          ||||||||||    
T  49644109 ctttttggtcctctaactatttaattggtatcagattggtcctctaattaaaaattgatttaattcggtcctctaagtttccatccattactacatttag 49644010  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  49644009 tcctttctgttagttttattcaaataa 49643983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 23476353 - 23476478
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||    
T  23476353 tttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcggtccactaagtttctcaccgttactacatttagt 23476452  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  23476453 cctttctgttagttttattcaaataa 23476478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 31704051 - 31703926
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| || ||| |||||||          |||||||||||    
T  31704051 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggacctataagtttctcactgttactacatttagt 31703952  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||||||||||||||||||    
T  31703951 cctttctgttaattttattcaaataa 31703926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 3089353 - 3089434
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| |||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3089353 cttttgggtcctctaactatttaattggcatcggattggtactctaactaaaaattgatttatttcggtcctctaagtttct 3089434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 4696893 - 4696974
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  4696893 ctttttagtcctctaactatttaattggtatcggattggtcctataactaaaaattgatttattttggtcctctaagtttct 4696974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 6798246 - 6798165
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  6798246 ctttttggtcttctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaaatttct 6798165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 23598083 - 23598164
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  23598083 ctttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcagtcctctaaatttct 23598164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 37467659 - 37467578
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||  |||||||||    
T  37467659 ctttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattaatttatttaggtcccttaagtttct 37467578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 37576620 - 37576539
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37576620 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggttctctaagtttct 37576539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 2064649 - 2064569
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  2064649 tttttgatcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggttctctaagtttct 2064569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 37304466 - 37304386
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| | ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  37304466 tttttggccctctaactatttaattggtatcggattgatcctataactaaaaattgatttatttcggtcctctaagtttct 37304386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 45843555 - 45843475
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45843555 tttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 45843475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 8760283 - 8760362
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  8760283 ctttttggtcctctaactatttaattggtatcggattgaccctctaactaaaaattgatttatttcgatcctctaagttt 8760362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 9006202 - 9006281
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  9006202 ctttttggtcctctaactatttaattggtatcggattgatcctttaactaaaaattgatttatttcggtcatctaagttt 9006281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 25995795 - 25995921
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||| |||||||          ||||||||||    
T  25995795 ctttttggtcctctaactatttaattggtatcagattggtcctttaattaaaaattgatttatttcggtcctttaagtttctcactgttactacatttag 25995894  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  25995895 tcctttctgttagttttattcaaataa 25995921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 38127720 - 38127799
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||  ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38127720 ctttttggttctctaactatttaattggtttcggattggtcatctaactaaaaattgatttatttcggtcctctaagttt 38127799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 34967150 - 34967080
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  34967150 tctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtccattaagtttct 34967080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 341
Target Start/End: Complemental strand, 5537242 - 5537173
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  5537242 tttttggtcctctaactatttaatcggtatcggattggtcctctaactaaaaattgatttatttcggtcc 5537173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 9006629 - 9006504
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---------ctacatttagt 361  Q
    |||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||| | ||||| ||||||         |||||||||||    
T  9006629 ctttttggtcttctaactatttaatcgttatcggattggtcctctaactaaaaattgatttatttggatcctccaagtttctcaccttactacatttagt 9006530  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  9006529 cctttctgttagttttattcaaataa 9006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 35612093 - 35612174
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  35612093 ctttttggtcctctaagtatttaattggtatcggattgatcctctaactaaaaattgatttattttgttcctctaagtttct 35612174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 39486213 - 39486294
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  39486213 ctttttggttctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcgtttaagtttct 39486294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 339
Target Start/End: Original strand, 10831142 - 10831210
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggt 339  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  10831142 ctttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcggt 10831210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 10832024 - 10831944
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  10832024 tttttggtcctctaactatttaactggtattggattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 10831944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 37284740 - 37284820
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  37284740 tttttggtcctctaactatttaattgatatcggattggttctctaactaaaaattgatttatttcggtcatttaagtttct 37284820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 13109266 - 13109191
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||| ||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  13109266 ctttttagtcctctaactatttaattggtatccgattagtcctctaactaaaaattgatttatttcggtcctctaa 13109191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 37576192 - 37576267
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| | |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37576192 ctttttggtcctttaactattaaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaa 37576267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 49140581 - 49140456
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||| |||||||          ||||||||||    
T  49140581 ctttttggtcctctaactatttaattggtatcagattagtcctctaact-aaaattgatttatttcggtcctataagtttctcactgttactacatttag 49140483  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  49140482 tcctttctgttagttttattcaaataa 49140456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 4330276 - 4330195
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||| ||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  4330276 cttttttgtcctctaattatttaattggtatcggattaaccctctaactaaaaattgatttatttcggtcctctaagtttct 4330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 26723240 - 26723159
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  26723240 ctttttgatcctctaactatttaattggtatcagattgatcatctaactaaaaattgatttattttggtcctctaagtttct 26723159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 34966314 - 34966395
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  34966314 ctttttggacctctaactatttaattggtatcggattggtcctctaactaaaacttgatttatttcagtcccttaagtttct 34966395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 45052701 - 45052782
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  45052701 ctttttgatcttcaaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctataagtttct 45052782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 37585705 - 37585785
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  37585705 tttttggtcctctaactatttaattggtattagattgatcctctaactaaaaattgatttatttcgatcctctaaatttct 37585785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 4697222 - 4697163
Alignment:
Q  287 ctatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4697222 ctatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaa 4697163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 32047754 - 32047829
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  32047754 ctttttggtcctctaactatttaattggtaacggtttggtcctctaactaaaaaatgatttattttggtcctctaa 32047829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 37586132 - 37586053
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||| |||||||||||| |||||| ||||||||||| |||||||| |||||||| ||||||||||||| |||||||||    
T  37586132 cttttttgtcatctaactacttaattggtatcggattgatcctctaattaaaaattaatttatttcggtcttctaagttt 37586053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 6797819 - 6797899
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||  |||||||||||||||  |||| ||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  6797819 tttttggttctctaactatttaattgatatcagattgatcttctaattaaaaattgatttatttcggtcctctaagtttct 6797899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 37285165 - 37285085
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| | ||||||||||||| ||||  |||||||||||||||||||||||||||||||||| | |||||| |||||    
T  37285165 tttttggtcctttaactatttaattggtattagattggtcctctaactaaaaattgatttatttcgattctctaaatttct 37285085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 12127484 - 12127411
Alignment:
Q  282 tctaactatttaatttgtatcggattggt---cctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| |||||||||| ||   ||||||| ||||||||||||||||||||||||||||||||||    
T  12127484 tctaactatttaattggtatcggattagttctcctctaattaaaaattgatttatttcggtcctctaagtttct 12127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 13183777 - 13183852
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    ||||||| || ||||||||||||||| |||| | ||| ||| ||||||||||||||||||||||||||||||||||    
T  13183777 ctttttgatcctctaactatttaattggtattgaattagtcttctaactaaaaattgatttatttcggtcctctaa 13183852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 5536410 - 5536478
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtc 340  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||    
T  5536410 tttttggccctctaactatttaattggtatcggattggtcctctacctaaaatttgatttatttgggtc 5536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 31703660 - 31703751
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 387  Q
    ||||||||||||||||||||||||||||||||||||| |||||||          ||||||||||||||| |||||| ||||||||||||||    
T  31703660 ttggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttactacatttagtcctttctgttagttttattcaaataa 31703751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 28884028 - 28884103
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||| ||||||||| ||| ||| ||||||||||||||||||| | |||||||| ||||||||||    
T  28884028 ctttttggtcctctaattatttaattggtaacggtttggtcctctaactaaaaaataatttattttggtcctctaa 28884103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 350
Target Start/End: Complemental strand, 39486623 - 39486552
Alignment:
Q  279 tcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||||||||||| |||| | |||| ||||||||||||||||||||||||||| ||  |||||||||    
T  39486623 tcatctaactatttaattggtattgaattgttcctctaactaaaaattgatttatttccgttttctaagttt 39486552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 20306438 - 20306360
Alignment:
Q  274 tttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| |||||||| |||||| ||||| ||||| ||||| ||||||| |||||||||||| |||||| |||||||||    
T  20306438 tttggtcctctaactagttaattggtatcagattgatcctccaactaaagattgatttattttggtcctttaagtttct 20306360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 28884861 - 28884787
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    ||||||||| ||||||||||||||| ||  ||| ||||||||||||||||||| ||||||||||  |||||||||    
T  28884861 tttttggtcctctaactatttaattggttacggtttggtcctctaactaaaaaatgatttattttagtcctctaa 28884787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 46289335 - 46289397
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttat 333  Q
    ||||||| || ||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  46289335 ctttttgatcctctaactatttaattggtatcagattggtcatctaactaaaaattgatttat 46289397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 46592823 - 46592904
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| | |||||||||||||||  |||| ||||| ||||||||||||||| |||||||||||| |||  |||||||||    
T  46592823 ctttttggccctctaactatttaattgatatcagattgatcctctaactaaaaaatgatttatttcgatcccttaagtttct 46592904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 49838808 - 49838756
Alignment:
Q  288 tatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtc 340  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  49838808 tatttaattggtatcagattggtcttctaactaaaaattgatttatttcggtc 49838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 32048620 - 32048546
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    ||||||||| |||||||||||| ||  || ||| ||||||||||||||||||| ||||||||||  |||||||||    
T  32048620 tttttggtcctctaactatttatttgataacggtttggtcctctaactaaaaaatgatttatttttgtcctctaa 32048546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 49837417 - 49837463
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  49837417 ttggtcctctaactaaaaattgatttatttcggtcccttaagtttct 49837463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 37466831 - 37466883
Alignment:
Q  289 atttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    |||||||| ||||||||||  | ||||||||||||||||||||||||| ||||    
T  37466831 atttaattggtatcggattactgctctaactaaaaattgatttatttccgtcc 37466883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 26498055 - 26498108
Alignment:
Q  141 gtcatcgtgaccttagctcagttggaagggacaatataaaaaatatgtaaggtc 194  Q
    |||||||||| |||||||||||||| | |||||||  | |||||||||||||||    
T  26498055 gtcatcgtgagcttagctcagttggtacggacaatgcataaaatatgtaaggtc 26498108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 43426185 - 43426226
Alignment:
Q  152 cttagctcagttggaagggacaatataaaaaatatgtaaggt 193  Q
    |||||||||||||| |||||||||| | ||||||||||||||    
T  43426185 cttagctcagttggtagggacaatacataaaatatgtaaggt 43426226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 52178880 - 52178920
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaa 324  Q
    ||||||||||||||||||||  |||||||| ||||||||||    
T  52178880 taactatttaatttgtatcgttttggtcctataactaaaaa 52178920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 22592 - 22466
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  22592 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactattactacatttag 22493  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  22492 tcctttctgttagttttattcaaataa 22466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 21523 - 21604
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21523 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 21604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 5938252 - 5938126
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  5938252 ctttttggtcatctaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcacaattactacatttag 5938153  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  5938152 tcctttctgttagttttattcaaataa 5938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 32753612 - 32753486
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  32753612 ctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 32753513  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  32753512 tcctttctgttagttttattcaaataa 32753486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 34891085 - 34891002
Alignment:
Q  269 tactttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34891085 tactttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 34891002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 32993453 - 32993328
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gtttctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||          |||||||||||||||    
T  32993453 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctataagtttctcaccgtttctacatttagt 32993354  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  32993353 cctttctgttagttttattcaaataa 32993328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 2517441 - 2517360
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2517441 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 2517360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 6137816 - 6137735
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6137816 ctttttggtcctctaactatttaattggtatcggattggtcctttaactaaaaattgatttatttcggtcctctaagtttct 6137735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 2517014 - 2517094
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2517014 tttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 2517094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 3423183 - 3423262
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423183 ttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 3423262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 15932994 - 15932869
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  15932994 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttagt 15932895  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  15932894 cctttctgttagttttattcaaataa 15932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 21856567 - 21856692
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  21856567 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttagt 21856666  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  21856667 cctttctgttagttttattcaaataa 21856692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 9046098 - 9046230
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||          |||||||||||    
T  9046098 tttttggtcctctaactatttaattggtatcagattggtcctctaagtaaaaattgatttatttcggtcctctaagtttgtcaccgttactacatttagt 9046197  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    | || |||||| |||||||||||||| ||||||    
T  9046198 cttttctgttagttttattcaaataaatgttag 9046230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 9046525 - 9046444
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9046525 ctttttggtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtccgctaagtttct 9046444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 18053392 - 18053311
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18053392 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtactctaagtttct 18053311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 34994391 - 34994472
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34994391 ctttttggtcctttaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 34994472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 35167501 - 35167582
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35167501 ctttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 35167582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 18052980 - 18053048
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18052980 taactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 18053048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 32753189 - 32753269
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32753189 tttttggtcctctaactatttaattagtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 32753269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 17244675 - 17244754
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17244675 ctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctctaagttt 17244754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 21856994 - 21856868
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          ||||||||||    
T  21856994 ctttttggtcctctaagtatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttag 21856895  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  21856894 tcctttctgttagttttattcaaataa 21856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 26957400 - 26957274
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||| |||||||          ||||||||||    
T  26957400 ctttttggtcatctaactatttaattggtattagattggtcctttaactaaaaattgatttatttcggtcctttaagtttttcaccgttactacatttag 26957301  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  26957300 tcctttctgttagttttattcaaataa 26957274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 25176675 - 25176800
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||          |||||||||||    
T  25176675 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattatggtcctctaagtttctcaccgttactacatttagt 25176774  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  25176775 cctttctgttagttttattcaaataa 25176800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 5311265 - 5311184
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5311265 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtgctctaagtttct 5311184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 5937824 - 5937905
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  5937824 ctttttggtcctctaactatttaattggtatcagattgattctctaactaaaaattgatttatttcggtcctctaagtttct 5937905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 6137390 - 6137470
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  6137390 ctttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaa-tgatttatttcggtcctctaagtttct 6137470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 6532203 - 6532284
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  6532203 cttttttgtcctctaactatttaatttgtatcggattgatcctctaactaaaaattgatttatttcggttctctaaatttct 6532284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 7271068 - 7270987
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  7271068 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcagtcctctaagtttct 7270987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 7438815 - 7438896
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  7438815 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 7438896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 15932741 - 15932822
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  15932741 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgatcctctaagtttct 15932822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 31237758 - 31237890
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||          |||||||||||    
T  31237758 tttttggtcctctaactatttaattggtatcggattagttctctaactaaaaattgatttatttcggtcttctaagtttctcaccgttactacatttagt 31237857  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    | || |||||| |||||||||||||| ||||||    
T  31237858 catttctgttagttttattcaaataaatgttag 31237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 34994819 - 34994738
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34994819 ctttttagtcatctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 34994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 978427 - 978507
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  978427 tttttggtcctctaactatttagttggtatcgtattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 978507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 5639611 - 5639531
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  5639611 tttttgatcttctaactatttaattggtatcggattagtcctctaactaaaaatttatttatttcggtcctctaagtttct 5639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 34517284 - 34517364
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  34517284 tttttggtcctctaactatttaattggtgtcggattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 34517364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 26600368 - 26600447
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  26600368 ctttttggtcctctaactattaaattggtatcggattagtcctctaactaaaaattaatttatttcggtcctctaagttt 26600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 7269973 - 7270043
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7269973 tctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggttctctaagtttct 7270043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 24744341 - 24744419
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 351  Q
    |||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  24744341 tttttgtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaactttc 24744419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 6235932 - 6236013
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  6235932 ctttttggtcctctaactatttaattggtatcagattagtcctataattaaaaattgatttatttcggtcctctaagtttct 6236013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 6236359 - 6236278
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 353  Q
    |||||||||  ||||||||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236359 tttttggtcccctaactatttaattgatatttgattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 6236278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 10412940 - 10412859
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | |||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  10412940 ctttttggtcttttaactatttagttggtatcggattagttctctaactaaaaattgatttatttcggtcctctaagtttct 10412859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 14276410 - 14276491
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  14276410 ctttttggtcctctacctatttaattggtatcggattgatcctctaactaaaaattgatttacttcggtcctctaaatttct 14276491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 34518131 - 34518050
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||  |||||||||    
T  34518131 ctttttggtcctctaactatttaattggtatcggattggtcctcaaactaaaaattgatttatttcgatcccttaagtttct 34518050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 34890655 - 34890736
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  34890655 ctttttgttcctctaactatttaattggtattggattggtcctctaactaaaaattgatttattttggtcctcaaagtttct 34890736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 21540415 - 21540335
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| | ||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  21540415 tttttggtcctttaactatttaattggtatcagattagtcctctaattaaaaattgatttatttcggtcctctaagtttct 21540335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 26600785 - 26600705
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| |||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26600785 ttttttgtcctctaactatttagttggtattggattggtcttctaactaaaaattgatttatttcggtcctctaagtttct 26600705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 31247128 - 31247208
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  |||||||||||    
T  31247128 tttttggtcctctaactatttaattggtatcggattagttctctaactaaaaattgatttatttcggtgttctaagtttct 31247208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 5310837 - 5310970
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||||||  |||| || | ||||| |||||||||||||||||||||||||| |||||||||          ||||||||||    
T  5310837 ctttttggtcctctaactatttaattgatatcagagtagtcctataactaaaaattgatttatttcggtcatctaagtttctcactgttactacatttag 5310936  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    ||||| |||||| |||||||||||||| ||||||    
T  5310937 tcctttctgttagttttattcaaataaatgttag 5310970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 31238185 - 31238113
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctct 344  Q
    |||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  31238185 ctttttggtcctctaactatttagttggtatcggattggtc-tctaactaaaaattgatttatttcggtcctct 31238113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 31247555 - 31247482
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctct 344  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  31247555 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattaatttatttcagtcctct 31247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 339
Target Start/End: Complemental strand, 25180287 - 25180219
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggt 339  Q
    |||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  25180287 ctttctggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggt 25180219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 29260542 - 29260623
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||| ||||| ||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||  |||||||||    
T  29260542 ctttctggtcctctaactatttaattggtatcagattggtcctcaaactaaaaattaatttatttcggtcccttaagtttct 29260623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 352
Target Start/End: Original strand, 32993030 - 32993107
Alignment:
Q  275 ttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||||||||||||||| ||||  |||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  32993030 ttggtcctctaactatttaattggtattagattggtcatctaagtaaaaattgatttattttggtcctctaagtttct 32993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 29261389 - 29261309
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||  |||||||||    
T  29261389 tttttagtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatgtcggtcccttaagtttct 29261309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 6228741 - 6228819
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||| ||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||    
T  6228741 ctttttagtcctctaattatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcc-ctaagttt 6228819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 15286356 - 15286421
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttc 336  Q
    ||||||| || ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  15286356 ctttttgatcctctaactatttaattggtgtcggattggtcctctgactaaaaattgatttatttc 15286421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 35167893 - 35167833
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgattta 332  Q
    ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  35167893 tttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgattta 35167833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 7270392 - 7270266
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gtttctacatttag 360  Q
    |||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| |||| ||| ||| ||||||          ||| ||||||||||    
T  7270392 ctttttggtcctttaactatttaattggtatcgaattgatcctctaactaaaaattaattttttttggttctctaaatttctcatcgttactacatttag 7270293  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    || || |||||||||||||||||||||    
T  7270292 tcttttctgttaattttattcaaataa 7270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 3035926 - 3035972
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  3035926 ttggtcttctaactaaaaattgatttatttcggtcctctaagtttct 3035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 26957015 - 26957054
Alignment:
Q  313 tctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26957015 tctaactaaaaattgatttatttcggtcctctaagtttct 26957054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 24744759 - 24744695
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttc 336  Q
    |||||||||| |||||||||||| || ||||   ||||||||||||||||||||||||||||||||    
T  24744759 ctttttggtcctctaactatttagttggtatta-attggtcctctaactaaaaattgatttatttc 24744695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 27829402 - 27829329
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||| || |||||||||||| ||| | | |||||||||||| |||||| |||||||||| ||||||||||    
T  27829402 ttttggtcctccaactatttaattggtaacagtttggtcctctaattaaaaaatgatttattttggtcctctaa 27829329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 6229761 - 6229692
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||   ||||||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||    
T  6229761 ctttttggtcccttaactatttaattagtatcggtttggtcc-ctaactaaaatttgatttattttggtcc 6229692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 17245682 - 17245629
Alignment:
Q  288 tatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||    
T  17245682 tatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 17245629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 34251576 - 34251644
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| |||||| || |||||||||| |||||   |||||||||| |||||||||| ||||||||||||||    
T  34251576 tctaattatttagttggtatcggattagtcctg--actaaaaattaatttatttcgatcctctaagtttct 34251644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 3423574 - 3423528
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||||    
T  3423574 ttggtccgctaattaaaaattggtttatttcggtcctctaattttct 3423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 7270672 - 7270721
Alignment:
Q  303 ggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||||||||||||||| | || | |||||||||    
T  7270672 ggattggtcctctaattaaaaattgatttattttgatcttttaagtttct 7270721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 25177006 - 25176970
Alignment:
Q  351 ctacatttagtccttcctgttaattttattcaaataa 387  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  25177006 ctacatttagtcctttctgttagttttattcaaataa 25176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 20763 - 20888
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  20763 tttttggtcatctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcacactgttactacatttagt 20862  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  20863 cctttctgttagttttattcaaataa 20888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 44991290 - 44991423
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  44991290 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 44991389  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    || || |||||| |||||||||||||| ||||||    
T  44991390 tcatttctgttagttttattcaaataaatgttag 44991423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 272 - 394
Target Start/End: Complemental strand, 624117 - 623985
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  624117 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcattgttactacatttagt 624018  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    |||| |||||| |||||||||||||| ||||||    
T  624017 cctttctgttagttttattcaaataaatgttag 623985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 25269438 - 25269313
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  25269438 tttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttagt 25269339  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  25269338 cctttctgttagttttattcaaataa 25269313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 30683966 - 30683841
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttagt 361  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  30683966 tttttggtcctctaaatatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcgcaccgttattacatttagt 30683867  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  30683866 cctttctgttagttttattcaaataa 30683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 15477656 - 15477737
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15477656 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaacattgatttatttcggtcctctaagtttct 15477737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 15478084 - 15478003
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15478084 ctttttggtcttctaactatttaattggtatcggattggtcctctaactaaaaattgattaatttcggtcctctaagtttct 15478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 39448927 - 39448846
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39448927 ctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 39448846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 43566389 - 43566470
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43566389 ctttttggtcttctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 43566470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 53751341 - 53751260
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53751341 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 53751260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 44957401 - 44957481
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44957401 tttttggtcctctaactattttattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 44957481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 8591980 - 8592106
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  8591980 ctttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 8592079  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  8592080 tcctttctgttagttttattcaaataa 8592106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 14985342 - 14985468
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  14985342 ctttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccattactacatttag 14985441  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  14985442 tcctttctgttagttttattcaaataa 14985468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 42855350 - 42855476
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  42855350 ctttttggtcctctaactatttagttggtatcggagtggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 42855449  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  42855450 tcctttctgttagttttattcaaataa 42855476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 46850108 - 46849982
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  46850108 ctttttggtcatctaactattaaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttatcaccgttactacatttag 46850009  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  46850008 tcctttctgttagttttattcaaataa 46849982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 53750913 - 53751039
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||| ||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  53750913 ctttttagtcctctaactattaaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 53751012  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  53751013 tcctttctgttagttttattcaaataa 53751039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 6505549 - 6505674
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    |||||| || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  6505549 tttttgatcctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttagt 6505648  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  6505649 cctttctgttagttttattcaaataa 6505674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 24898201 - 24898326
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||          |||||||||||    
T  24898201 tttttggtcctctaactatttaattggtatcggattgatcctctaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 24898300  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  24898301 cctttctgttagttttattcaaataa 24898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 43734724 - 43734599
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||          ||||||||||    
T  43734724 tttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctataagtttctcaccgttattacatttagt 43734625  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  43734624 cctttctgttagttttattcaaataa 43734599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 16038233 - 16038152
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16038233 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 16038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 42855778 - 42855697
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42855778 ctttttagtcatttaactatttaattagtatcggattggtcctccaactaaaaattgatttatttcggtcctctaagtttct 42855697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 43734297 - 43734378
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43734297 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaatagatttatttcggtcctctaagtttct 43734378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 44991717 - 44991636
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  44991717 ctttttggtcctctaactatttaattggtatcggattgatcctctaactgaaaattgatttatttcggtcctctaagtttct 44991636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 50769260 - 50769179
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  50769260 ctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcgatcctctaagtttct 50769179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 52557098 - 52557179
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  52557098 ctttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcggtcctataagtttct 52557179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 53259577 - 53259496
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53259577 ctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 53259496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 53995374 - 53995293
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53995374 ctttttggtcctctaactatttaattggtatcgcattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 53995293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 6711975 - 6712055
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6711975 tttttggccctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 6712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 8592407 - 8592327
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8592407 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 8592327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 38339931 - 38339851
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 351  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  38339931 ctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcgatcctctaagtttc 38339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 41877871 - 41878003
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa---------gtttctacatttagt 361  Q
    |||||||||||||||| |||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||         ||| |||||||||||    
T  41877871 ctttttggtcatctaattatttagttggtatcagattggtcatctaactaaaaattgatttatttcggtcctctaagttctcactgttactacatttagt 41877970  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    |||| |||||| |||||||||||||| ||||||    
T  41877971 cctttctgttagttttattcaaataaatgttag 41878003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 44125908 - 44125828
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  44125908 tttttggtcatctaactatttaattggtgtcggattggtcttctaactaaaaattgatttattttggtcctctaagtttct 44125828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 12817817 - 12817896
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12817817 ctttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctttaagttt 12817896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 14985770 - 14985644
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||          ||||||||||    
T  14985770 ctttttggtcctctaactatttaatttgtatcagattggtcatctaactaaaaattgatttattttgatcctctaagtttctcactgttactacatttag 14985671  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  14985670 tcctttctgttagttttattcaaataa 14985644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 19088352 - 19088478
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  19088352 ctttttggtcctctaactatttagttggtatcggaatgatcctctaactaaaaattgatttatttcggtcctctaagtttaataccgttactacatttag 19088451  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  19088452 tcctttctgttagttttattcaaataa 19088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 41752253 - 41752174
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  41752253 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattcatttattttggtcctctaagtttct 41752174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 16037806 - 16037931
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  16037806 tttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttctcactgttactacatttagt 16037905  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  16037906 cctttctgttagttttattcaaataa 16037931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 20888165 - 20888235
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20888165 tctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 20888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 39448502 - 39448580
Alignment:
Q  274 tttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  39448502 tttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcggtcctttaagtttct 39448580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 4513355 - 4513274
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  4513355 ctttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattaatttatttcggtcctctaagtttct 4513274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 12818245 - 12818164
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  12818245 ctttttggtcctctaattatttaattggtatcggattggtgctctaactaaaacttgatttatttcggtcctctaagtttct 12818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 19088780 - 19088699
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  19088780 ctttttggtcctctaactatttaattggtatcagattaatcctctaactaaaaattgatttatttcggtcctctaagtttct 19088699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 25181824 - 25181956
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttagt 361  Q
    ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||          ||||||||||    
T  25181824 tttttggtcctctaactatttagtttgtatcggattggtcctttaactaaaaattgatttattttggtcttctaagtttctcactgttattacatttagt 25181923  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    | || |||||| |||||||||||||| ||||||    
T  25181924 catttctgttagttttattcaaataaatgttag 25181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 25182251 - 25182170
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25182251 ctttttggtcttctaactatttagttggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 25182170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 38339503 - 38339584
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38339503 ctttttggtcctctaactatttaactggtatcagattggtcctctaactaaaaattgatttatttaggtcctctaagtttct 38339584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 55022295 - 55022376
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  55022295 ctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcgatcctctaagtttct 55022376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 1433709 - 1433629
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  1433709 tttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttattttggtcctctaattttct 1433629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 21763619 - 21763539
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21763619 tttttggtcctctaactatttaattggtataagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 21763539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 23756238 - 23756158
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  23756238 tttttggtcctctaactatttaattggtatcggattggtcctttaactaaaaattaatttattttggtcctctaagtttct 23756158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 36122870 - 36122791
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36122870 tttttgatcctctaactatttaattggtatcggattggtcctctaactaaaaattga-ttatttcggtcctctaagtttct 36122791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 1433282 - 1433408
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttag 360  Q
    |||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||          |||||||||    
T  1433282 ctttttggtcctctaactatttcattggtattggattggtcctctaactaaaaattgatttattttggttctctaagtttctcatcgttattacatttag 1433381  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  1433382 tcctttctgttagttttattcaaataa 1433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 352
Target Start/End: Original strand, 19508421 - 19508504
Alignment:
Q  269 tactttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  19508421 tactttttgatcctctaactatttaattggtatcggattggtcctctaactaacaattgatttatgtcggccctctaagtttct 19508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 52557526 - 52557400
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gtttctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||          ||| ||||||||||    
T  52557526 ctttttggtcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttattttggtcctctaaatttctcaccgttactacatttag 52557427  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  52557426 tcctttctgttagttttattcaaataa 52557400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 24898627 - 24898502
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | ||||||||||||          |||||||||||    
T  24898627 ttttttgtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttattttgatcctctaagtttctcaccgttactacatttagt 24898528  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  24898527 cctttctgttagttttattcaaataa 24898502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 8398042 - 8398123
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8398042 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaactttct 8398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 30683537 - 30683618
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  30683537 ctttttggtcctctaactatttaattggtatcagattgatcctccaattaaaaattgatttatttcggtcctctaagtttct 30683618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 46849680 - 46849761
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46849680 ctttttcgtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 46849761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 47602954 - 47603035
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||  |||||||||    
T  47602954 ctttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaattgatttattttggtcccttaagtttct 47603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 47603800 - 47603719
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  47603800 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattaatttatttcggtcccttaagtttct 47603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 50768832 - 50768913
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || | ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50768832 ctttttgatcctttaactatttaattggtatcgaattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 50768913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 52692035 - 52692116
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  52692035 ctttttgatcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 52692116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 53994945 - 53995026
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  53994945 ctttttggtcctctaactatttagttggtatcagattggtcctttaactaaaaattgatttatttcggtcctttaagtttct 53995026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 21763191 - 21763263
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctc 343  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  21763191 ctttttggtcctctaattatttaattggtatcggattggtcctccaactaaaaattgatttatttcggtcctc 21763263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 31214174 - 31214250
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagt 348  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||    
T  31214174 tttttgatcatctaactatttaattggtatcagattggtcctctaactaaaaattaatttatttcggtcctcaaagt 31214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 623691 - 623816
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| | |||||||||| || |||||||||||||||||||||||||||||| ||||||| |||||| |||||||          |||||||||||    
T  623691 tttttggtcctttaactatttagttggtatcggattggtcctctaactaaaaattgttttattttggtcctataagtttcttaccgttactacatttagt 623790  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  623791 cctttctgttagttttattcaaataa 623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 23755440 - 23755510
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  23755440 tctaactatttaattggtattggattggtcctctaactaaaaattaatttatttcggttctctaagtttct 23755510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 49136065 - 49135995
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  49136065 tctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctttaagtttct 49135995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 6712400 - 6712276
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa---------gtttctacatttagt 361  Q
    |||||||||| ||||||||||||||| |||  |||||| ||||||||||| |||||||||||||||||||||||||         ||| |||||||||||    
T  6712400 ctttttggtc-tctaactatttaattggtaatggattgatcctctaactacaaattgatttatttcggtcctctaaattttcactgttactacatttagt 6712302  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  6712301 cctttctgttagttttattcaaataa 6712276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 33091464 - 33091545
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||  ||||  |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  33091464 ctttttggtcctctaactatttaatcagtattagattggtcctctaactaaaaattgatttattttgatcctctaagtttct 33091545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 44957796 - 44957715
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||||||  ||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  44957796 ctttttggtcctctaactatttaattgatatcaaattggtcctttaactaaaaattgatttatttcgatcctctaagtttct 44957715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 33091891 - 33091811
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  33091891 tttttagtcctctaactatttaattagtattagattggtcctctaactaaaaattgatttatttcagtcatctaagtttct 33091811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 41878296 - 41878216
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||| ||||| | ||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  41878296 tttttggtcctctaactatataattggaatcagattagtcctctaactaaaaattgatttattgcggtcctctaagtttct 41878216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 36122444 - 36122523
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||  ||| |||||||||    
T  36122444 ctttttggtcctctgactatttaattggtatcagattggtcctctaactaaaaattgatttatttttgtcatctaagttt 36122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 50508896 - 50508817
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||  ||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  50508896 ctttttggttttctaattatttaattggtatcagattggtcatctaactaaaaattgatttattttggtcctctaagttt 50508817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 394
Target Start/End: Original strand, 41751841 - 41751960
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaa 373  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||          |||||||||||| || ||||||     
T  41751841 taactatttaattggtatcggattggtcctctaactaaaaattgatttattttggt-ctttaagtttctcactgttactacatttagtctttactgttag 41751939  T
Q  374 ttttattcaaataagtgttag 394  Q
    |||||||||||||| ||||||    
T  41751940 ttttattcaaataaatgttag 41751960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 37206855 - 37206787
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37206855 tctaactatttaattgatatcagattagtcctctaactaaaaattgatttatttcggttctctaagttt 37206787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 19508824 - 19508726
Alignment:
Q  299 tatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 387  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||          ||||||||||||||| |||||| ||||||||||||||    
T  19508824 tatcagattggtcctctaactaaaaattgatttatttcggtcctccaagtttctcacccttactacatttagtcctttctgttagttttattcaaataa 19508726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 55022497 - 55022424
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||| ||| ||||||||||||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  55022497 tttttgtcctctaactatttaattggtatcggattaatcctctaattaaaaattgatttatttcgatcctctaa 55022424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 43566790 - 43566736
Alignment:
Q  298 gtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  43566790 gtatcggattggtcctctaactaaaaattgatttatttcagtcttttaagtttct 43566736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 44125633 - 44125714
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | ||||||||||||| ||||   |||||| |||||||||||||||||||| |||||||  |||||||||||    
T  44125633 ctttttggtcctttaactatttaattggtattaaattggttctctaactaaaaattgatttttttcggttttctaagtttct 44125714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 52692878 - 52692798
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | || ||||||||||  ||||| ||||||||||||||||||||||||||||||| |||||  |||||||||    
T  52692878 ctttttggtcctttagctatttaattgctatcg-attggtcctctaactaaaaattgatttattttggtcccttaagtttct 52692798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 53259184 - 53259230
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  53259184 ttggtcctctaactaaaaattaattaatttcggtcctctaagtttct 53259230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 37206440 - 37206564
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtc 362  Q
    ||||| || |||||||||| | ||  |||| ||||  |||||||  ||||||||||||||||||||||||||||||||          ||||||||||||    
T  37206440 ttttgatcctctaactattcagttgatatcagattaatcctctagttaaaaattgatttatttcggtcctctaagtttttcactgttactacatttagtc 37206539  T
Q  363 cttcctgttaattttattcaaataa 387  Q
    ||| |||||| ||||||||||||||    
T  37206540 ctttctgttagttttattcaaataa 37206564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 50508512 - 50508549
Alignment:
Q  315 taactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||||||||||||||||||| |||||||||    
T  50508512 taactaaaaattgatttatttcggtcctttaagtttct 50508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 8e-34; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 1652010 - 1651929
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1652010 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 1740386 - 1740305
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1740386 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1740305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 15048410 - 15048536
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  15048410 ctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttctgaccgttactacatttag 15048509  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  15048510 tcctttctgttagttttattcaaataa 15048536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 11174073 - 11173992
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174073 ctttttggtcctctaactatttaattggtatctgattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 11173992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 15048838 - 15048757
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15048838 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 15048757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 33819796 - 33819877
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33819796 ctttttggtcctctaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 33819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 37569325 - 37569406
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37569325 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 37569406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 45276608 - 45276689
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276608 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 45276689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 1432143 - 1432223
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1432143 tttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1432223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 15872059 - 15871979
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15872059 tttttggtcctctaactatttaatttgtatcagattggtcctctaaataaaaattgatttatttcggtcctctaagtttct 15871979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 1739959 - 1740085
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttag 360  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||||||||    
T  1739959 ctttttggtcctctaactatttaatcggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttattacatttag 1740058  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  1740059 tcctttctgttagttttattcaaataa 1740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 11920211 - 11920136
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11920211 ctttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttgggtcctctaa 11920136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 1646512 - 1646593
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1646512 ctttttggtcctctaactatttaattggtatcagattggttctctaactaaaaattgatttatttcggtcctctaagtttct 1646593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 1646945 - 1646864
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1646945 ctttttcgtcctctaactatttaattggtatcggattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 1646864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 7535272 - 7535191
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7535272 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 7535191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 45277035 - 45276954
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  45277035 ctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaatttatttatttcggtcctctaagtttct 45276954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 34470983 - 34470857
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||          ||||||||||    
T  34470983 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttttcaccgttgctacatttag 34470884  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  34470883 tcctttctgttagttttattcaaataa 34470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 5435339 - 5435258
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  5435339 ctttttggtcctctaactatataattggtatcggattggtgctctaactaaaaattgatttatttcggtcctttaagtttct 5435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 22763372 - 22763291
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  22763372 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 22763291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 27473083 - 27473164
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27473083 ctttttggtcctctaactatttagttgatatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27473164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 27473510 - 27473429
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27473510 ctttttggtcctctaacaatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 27473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 27669435 - 27669508
Alignment:
Q  279 tcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27669435 tcatttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaaatttct 27669508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 33296123 - 33296042
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  33296123 ctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattaatttatttcggtcctctaagtttct 33296042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 40660325 - 40660244
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40660325 ctttttggtcctctaactatttagttgttatcgaattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 40660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 45077642 - 45077561
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45077642 ctttttggtcctctaactatttgattagtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 45077561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 38589025 - 38588945
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||  ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38589025 tttttggttctctaactatttaattggtattggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 38588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 5152971 - 5152892
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||| ||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5152971 tttttgtcctctgactgtttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 5152892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 7949423 - 7949549
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||| | ||| ||||||||||||||||||||||||||||||||          ||||||||||    
T  7949423 ctttttggtcctctaactatttaattggtatcagattggtcttttaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 7949522  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  7949523 tcctttctgttagttttattcaaataa 7949549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 38588600 - 38588679
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||| ||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38588600 ttttcgtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 38588679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 45077232 - 45077307
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  45077232 ctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaa 45077307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 1870373 - 1870293
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||  ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1870373 tttttggtcctctaactatttaattggtataagatagatcctctaactaaaaattgatttatttcggtcctctaagtttct 1870293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 40659995 - 40660075
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  40659995 tttttggtcctctaactatttaattggtatcgaattagtcatctaactaaaaattgatttatttcagtcctctaagtttct 40660075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 353
Target Start/End: Complemental strand, 44595038 - 44594958
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 353  Q
    |||| ||| |||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44595038 tttttgtcctctaactatttaattgatattggattagtcctctaactaaaaattgatttatttcggtcctctaagtttcta 44594958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 5434911 - 5435037
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||  |||||||||          ||||||||||    
T  5434911 ctttttggtcctctaactatttaattggtatcggattgatcctctacctaaaatttgatttatttcggttttctaagtttctcaccgttactacatttag 5435010  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  5435011 tcctttctgttagttttattcaaataa 5435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 1869946 - 1870070
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtc 362  Q
    |||| ||| ||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||          ||||||||||||    
T  1869946 tttttgtcctctaactatttaattggtatcagattgatcctctaactaaaaattaatttatttcggttctctaagtttctcaccgttactacatttagtc 1870045  T
Q  363 cttcctgttaattttattcaaataa 387  Q
    ||| |||||| ||||||||||||||    
T  1870046 ctttctgttagttttattcaaataa 1870070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 7534853 - 7534970
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct-acatttagtccttcctg 369  Q
    |||||||||| ||||| |||||| ||  ||||||||| ||||| ||| |||||||||||||||||||||| | ||||||||| ||  ||||||||| |||    
T  7534853 ctttttggtcttctaattatttagttgatatcggattagtcctttaattaaaaattgatttatttcggtcatttaagtttctcaccgttagtcctttctg 7534952  T
Q  370 ttaattttattcaaataa 387  Q
    ||| ||||||||||||||    
T  7534953 ttagttttattcaaataa 7534970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 11707761 - 11707842
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || |||||||||||| || ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11707761 ctttttgatcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttgtttcgatcctctaagtttct 11707842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 15871632 - 15871713
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| | |||||||||||||  |||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  15871632 ctttttggtcctttaactatttaattgatatcggattggtcctctaactaaaaattaatttattttggtcctctaaatttct 15871713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 22762525 - 22762605
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||| ||||||||||||||||||| |||  |||||||||    
T  22762525 tttttggtcatctaactatttaattggtatcggattaatcctctaattaaaaattgatttatttcgatcccttaagtttct 22762605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 5152546 - 5152671
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||          ||||||||||    
T  5152546 ctttttgatcctctaactgtttaattggtatcagattggtcctctgactaaaaattgatttattt-ggtcctctaagtttctcattgttactacatttag 5152644  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  5152645 tcctttctgttagttttattcaaataa 5152671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 40048079 - 40048196
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctacatttagtccttcctg 369  Q
    |||||| | ||||||||||||||||  ||| ||||| |||||||||||||||||| |||||||| | | ||||||  ||| |||||||||||| || |||    
T  40048079 tttttgataatctaactatttaattgatattggattagtcctctaactaaaaattaatttattttgattctctaactgttactacatttagtcatttctg 40048178  T
Q  370 ttaattttattcaaataa 387  Q
    ||| ||||||||||||||    
T  40048179 ttagttttattcaaataa 40048196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 12643955 - 12643891
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttattt 335  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  12643955 ctttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttattt 12643891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 24666117 - 24666042
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||||||||||||| ||| ||| |||||||| |||||||||| |||||||||| ||||||||||    
T  24666117 ctttttggtcctctaactatttaattggtaacggtttggtcctttaactaaaaaatgatttattttggtcctctaa 24666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 33295747 - 33295826
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||||||| |||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||  |||||||||    
T  33295747 ctttttggtcctctaactatttagttggtatcagattggtcttctaattaaaaattgatttatttcggtattctaagttt 33295826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 24652835 - 24652905
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcct 342  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||| ||||||    
T  24652835 tttttggtcctctaactatttaattggtaacggtttggtcctctaactaaaaaatgatttattttggtcct 24652905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 27669848 - 27669793
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcg 337  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  27669848 tctaactatttaattggtatcagattggtcttctaactaaaaattgatttatttcg 27669793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 33820041 - 33819975
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagt 348  Q
    ||||||||||||||| ||||||||||| || |||||||||||||| ||||||||| ||| |||||||    
T  33820041 tctaactatttaattggtatcggattgatcatctaactaaaaattaatttatttcagtcttctaagt 33819975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 44594613 - 44594683
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcct 342  Q
    ||||||||| ||||| |||||||||  |||  |||||||||| ||||||||||||||||||||||||||||    
T  44594613 tttttggtcctctaattatttaattgctattagattggtcctttaactaaaaattgatttatttcggtcct 44594683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 15740624 - 15740705
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||   ||||||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||  |||||||||    
T  15740624 ctttttggtccattaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcccttaagtttct 15740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 40048493 - 40048412
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || ||||  |||||| || |||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||    
T  40048493 ctttttgatcctctagttatttagttggtatcgtattgatcctctaactaaaaattgttttattttgatcctctaagtttct 40048412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 15741671 - 15741607
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttattt 335  Q
    ||||||||||   ||||||||||||| ||||||| |||||||||||||||||  |||||||||||    
T  15741671 ctttttggtcccttaactatttaattggtatcggtttggtcctctaactaaattttgatttattt 15741607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 23663502 - 23663537
Alignment:
Q  20 tggttaactttggagttgtctttatataatggtata 55  Q
    ||||||||||| ||||||||||||||||||||||||    
T  23663502 tggttaacttttgagttgtctttatataatggtata 23663537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 15744468 - 15744594
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  15744468 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctaactgttactacatttag 15744567  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  15744568 tcctttctgttagttttattcaaataa 15744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 24138079 - 24138212
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||          ||||||||||    
T  24138079 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtccactaagtttctcaccgttactacatttag 24138178  T
Q  361 tccttcctgttaattttattcaaataagtgttag 394  Q
    ||||| |||||| |||||||||||||| ||||||    
T  24138179 tcctttctgttagttttattcaaataaatgttag 24138212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 385
Target Start/End: Original strand, 8173896 - 8174020
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  8173896 ctttttggtcctctaactatttaattgatatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttag 8173995  T
Q  361 tccttcctgttaattttattcaaat 385  Q
    ||||| |||||||||||||||||||    
T  8173996 tcctttctgttaattttattcaaat 8174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 17032604 - 17032685
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17032604 ctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctcgaagtttct 17032685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 38333119 - 38333038
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38333119 ctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 38333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 7495992 - 7496072
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7495992 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 7496072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 13193000 - 13193080
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13193000 tttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 13193080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 15405768 - 15405848
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15405768 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcttctaagtttct 15405848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 12860392 - 12860517
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  12860392 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttagt 12860491  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  12860492 cctttctgttagttttattcaaataa 12860517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 19815716 - 19815841
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  19815716 tttttggtcctctaactatttagttggtatcggattggttctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 19815815  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  19815816 cctttctgttagttttattcaaataa 19815841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 17050940 - 17051021
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17050940 ctttttggtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctcgaagtttct 17051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 24371978 - 24372059
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24371978 ctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 24372059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 13193426 - 13193346
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13193426 tttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 13193346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 19816143 - 19816063
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 351  Q
    |||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19816143 ctttttggtcctcaaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttc 19816063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 34735781 - 34735701
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  34735781 tttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctttaagtttct 34735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 15406193 - 15406114
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15406193 tttttgtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 15406114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 29472253 - 29472379
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||          ||||||||||    
T  29472253 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaatagatttattttggtcctctaagtttctcaccgttcctacatttag 29472352  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  29472353 tcctttctgttagttttattcaaataa 29472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 41474521 - 41474395
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||          ||||||||||    
T  41474521 ctttttggtcctctaattatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctgagtttctcactgttactacatttag 41474422  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  41474421 tcctttctgttagttttattcaaataa 41474395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 7496417 - 7496292
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||          |||||||||||    
T  7496417 tttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttactacatttagt 7496318  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  7496317 cctttctgttagttttattcaaataa 7496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 19847756 - 19847631
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||| |||||||||          |||||||||||    
T  19847756 tttttggtcatctaactatttagttggtattggattggtcctctaactaaaaattaatttatttcggtcttctaagtttctcaccgttactacatttagt 19847657  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  19847656 cctttctgttagttttattcaaataa 19847631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 7469177 - 7469258
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||| | ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7469177 ctttttggccctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 7469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 16305464 - 16305383
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  16305464 ctttttgatcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcaatcctctaagtttct 16305383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 26181711 - 26181792
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26181711 ctttttggtcctctaactatttaattggaattggattggtccactaactaaaaattgatttatttcggtcctctaagtttct 26181792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 34735354 - 34735435
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  34735354 ctttttggtcctctaactatttagttggtatcgaattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 34735435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 38332716 - 38332848
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||  ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||          ||| |||||||    
T  38332716 tttttggttctctaactatttaattggtattggattgatcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttactatatttagt 38332815  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    |||| |||||| |||||||||||||| ||||||    
T  38332816 cctttctgttagttttattcaaataaatgttag 38332848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 15744885 - 15744805
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15744885 tttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 15744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 16305037 - 16305117
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggatt-ggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16305037 tttttgtcctctaactatttaattggtatcggatttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 16305117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 24372405 - 24372325
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  24372405 tttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttattttggtcctctaagtttct 24372325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 30898739 - 30898659
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  30898739 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgttcctctaagtttct 30898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 8174324 - 8174198
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gtttctacatttag 360  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||          ||||||||||||||    
T  8174324 ctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattaatttatttcggtcctttaaatttctcaccgtttctacatttag 8174225  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    || || |||||| ||||||||||||||    
T  8174224 tcatttctgttagttttattcaaataa 8174198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 10991862 - 10991937
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 346  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  10991862 ctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaa 10991937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 33470362 - 33470236
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||| || ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||          ||||||||||    
T  33470362 ctttttggtcctctaactatttagttggtatcagattgatcctctgactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 33470263  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  33470262 tcctttctgttagttttattcaaataa 33470236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 8962371 - 8962441
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  8962371 ctttttggtcctctaactatttaattagtatcagattggtcctctaactaaaaattgatttatttcggtcc 8962441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 17052490 - 17052412
Alignment:
Q  274 tttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17052490 tttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 17052412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 26182138 - 26182013
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| | ||| |||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||          |||||||||||    
T  26182138 tttttggtcctttaattatttaattgatatcggattggtcctctaactaaaaattgatttatttcggccctctaagtttctcactgttactacatttagt 26182039  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  26182038 cctttctgttagttttattcaaataa 26182013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 2147896 - 2148023
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaact-aaaaattgatttatttcggtcctctaagttt----------ctacattta 359  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||          |||||||||    
T  2147896 ctttttggtcctctaactatttaattagtatcagattggtcctctaactaaaaaaatgatttatttcgggcctctaagtttctcaccgttactacattta 2147995  T
Q  360 gtccttcctgttaattttattcaaataa 387  Q
    |||||| |||||| ||||||||||||||    
T  2147996 gtcctttctgttagttttattcaaataa 2148023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 2148324 - 2148244
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  2148324 ttttttgtcatttaactatttaattggtatcggattgatcctctaactaaaaattgatttattttggtcctttaagtttct 2148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 41474094 - 41474174
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||    
T  41474094 tttttggtcttctaactatttaattggtatcggatcggtcctgtaattaaaaatttatttatttcggtcctctaagtttct 41474174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 42834452 - 42834514
Alignment:
Q  290 tttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42834452 tttaattggtatcggattggtcctctaactaaaaattgatttatttcggttctctaagtttct 42834514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 8444833 - 8444914
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| ||  ||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  8444833 ctttttggtcttctaactatttagttgatatcggattggttatctaactaaaaattaatttatttcggtcctctaagtttct 8444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 29472681 - 29472600
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| |||| |||||| ||||||||| |||||||||||||||| |||||||||| |||||    
T  29472681 ctttttggtcctctaactatttaattggtattggattgatcctctaacaaaaaattgatttattttggtcctctaaatttct 29472600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 8963255 - 8963175
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||  |||||||||    
T  8963255 tttttggttctctaactatttaattggtatcggattggttctctaactaaaaattgatttattttggtcccttaagtttct 8963175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 7469597 - 7469479
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct--acatttagtccttcct 368  Q
    |||||||||  |||||||||||| || ||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||   | ||||||| ||  |    
T  7469597 ctttttggttctctaactatttagttggtatcagattggttctctaactaaaaattgatttatttcagtcgtctaagtttctcatcgtttagtcatttat 7469498  T
Q  369 gttaattttattcaaataa 387  Q
    |||| ||||||||||||||    
T  7469497 gttagttttattcaaataa 7469479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 36713599 - 36713680
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||| || ||||||||||||||| ||||||||||| || |||||||||||||||||||||||  ||||||||| |||||    
T  36713599 ctttttgatcctctaactatttaattggtatcggattgatcttctaactaaaaattgatttatttatgtcctctaaatttct 36713680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 12860771 - 12860680
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||| |||||| ||||||||||||||    
T  12860771 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttttcaccgttactacatttagtcctttctgttagttttattcaaataa 12860680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 8445228 - 8445149
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    |||||| ||| ||||||||||||||| |||||||||| |  |||||| |||||||||||||| |||||||||||||||||    
T  8445228 cttttttgtcctctaactatttaattggtatcggattagcactctaattaaaaattgatttacttcggtcctctaagttt 8445149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 10992255 - 10992164
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 387  Q
    |||||||||||| ||||||||||||||||||||||||||||||||          ||||||||||||||| |||||| ||||||||||||||    
T  10992255 ttggtcctctaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagtcctttctgttagttttattcaaataa 10992164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 24138946 - 24138865
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||  ||||||||||||||| |||||  ||| || || ||| |||||||||||||||||||||| |||||||||||    
T  24138946 ctttttggtattctaactatttaattggtatcaaattagtactttaattaaaaattgatttatttcggtcttctaagtttct 24138865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 36714024 - 36713943
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||  ||||||||||||||| |||| | |||||||||| ||||||||||||||||||||  ||| |||| ||||||    
T  36714024 ctttttggttctctaactatttaattggtattgaattggtcctcaaactaaaaattgatttattttcgtcatctaggtttct 36713943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 1821536 - 1821496
Alignment:
Q  20 tggttaactttggagttgtctttatataatggtatacatat 60  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  1821536 tggttaactttggagttgtctttatataatggtatagatat 1821496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 23992267 - 23992211
Alignment:
Q  285 aactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    |||||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||    
T  23992267 aactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 23992211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 37133043 - 37132973
Alignment:
Q  145 tcgtgaccttagctcagttggaagggacaatataaaaaatatgtaaggtcaatggttcgaattccggccac 215  Q
    |||||| ||||||||||||||  ||||||||  | ||||||||||||||| | ||||| |||| |||||||    
T  37133043 tcgtgagcttagctcagttggttgggacaatgcataaaatatgtaaggtctaaggttcaaatttcggccac 37132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 72773 - 72854
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  72773 ctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 72854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 73199 - 73074
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  73199 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactacatttagt 73100  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  73099 cctttctgttagttttattcaaataa 73074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 8e-31; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 271 - 394
Target Start/End: Complemental strand, 349511 - 349379
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaag---------tttctacatttagt 361  Q
    ||||||||||  ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||         || |||||||||||    
T  349511 ctttttggtcccctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagttctcacttttactacatttagt 349412  T
Q  362 ccttcctgttaattttattcaaataagtgttag 394  Q
    |||| ||||||||||||||||||||| ||||||    
T  349411 cctttctgttaattttattcaaataaatgttag 349379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 113405 - 113483
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    ||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  113405 tttttggtcctctaactgtttaattggtatccgattggtcctctaactaaaaattgatttatttcggtcctctaagttt 113483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 349085 - 349165
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  349085 ttttttgtcctctaactatttaattagtattagattagtcctctaactaaaaattgatttatttcgatcctctaagtttct 349165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 113804 - 113724
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||| |  |||| |||||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  113804 tttttggtcctctaactatttaagtgctatcagattggtcctgtaactaaaaattgatttctttcggtcatctaaatttct 113724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 45769 - 45893
Alignment:
Q  273 ttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtc 362  Q
    |||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||    
T  45769 ttttggtcctctaattatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcacggttactacatttagtc 45868  T
Q  363 cttcctgttaattttattcaaataa 387  Q
    ||| |||||| ||||||||||||||    
T  45869 ctttctgttagttttattcaaataa 45893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 56564 - 56494
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||| || ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  56564 tctaactatttagttggtatttgattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 56494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 63689 - 63619
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||||| || ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  63689 tctaactatttagttggtatttgattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 63619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 274 - 387
Target Start/End: Original strand, 14149 - 14272
Alignment:
Q  274 tttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtcc 363  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||          |||||||||||||    
T  14149 tttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttactacatttagtcc 14248  T
Q  364 ttcctgttaattttattcaaataa 387  Q
    || |||||| ||||||||||||||    
T  14249 tttctgttagttttattcaaataa 14272  T

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Target: scaffold0134; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 14574 - 14448
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| ||||          ||||||||||    
T  14574 ctttttggtcctctaactatttaattgatatcggattgatcctctaactaaaaattgatttatttcggtcctctatgtttctcaccgttactacatttag 14475  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  14474 tcctttctgttagttttattcaaataa 14448  T

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Target: scaffold0032 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 81869 - 81995
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    ||||||| || |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  81869 ctttttgatcctctaactatttatttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttag 81968  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  81969 tcctttctgttagttttattcaaataa 81995  T

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Target: scaffold0032; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 90876 - 90796
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||| ||| |||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  90876 tttttcgtcctctaactatttagttggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 90796  T

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Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 82207 - 82171
Alignment:
Q  351 ctacatttagtccttcctgttaattttattcaaataa 387  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  82207 ctacatttagtcctttctgttagttttattcaaataa 82171  T

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Target: scaffold0019 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 50487 - 50613
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttag 360  Q
    |||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||          ||||||||||    
T  50487 ctttttggtcctctacctatttaattggtatctgattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttactacatttag 50586  T
Q  361 tccttcctgttaattttattcaaataa 387  Q
    ||||| |||||| ||||||||||||||    
T  50587 tcctttctgttatttttattcaaataa 50613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 50915 - 50834
Alignment:
Q  272 tttttggtcatctaactattt-aatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  50915 tttttggtcctctaactattttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcttctaagtttct 50834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 24600 - 24475
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||    
T  24600 tttttggtactctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcactgttactacatttagt 24501  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    | || |||||||||||||||||||||    
T  24500 catttctgttaattttattcaaataa 24475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 24173 - 24254
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||| | ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24173 ctttttggtcctctaactatttagttggtattgaattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 24254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 19719 - 19800
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19719 ctttttggtcctctaactatttagttggtattggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 19800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 20146 - 20066
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||  |||  |||||||||||||||    
T  20146 tttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgattattttttgtcctctaagtttct 20066  T

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Target: scaffold0221 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 8866 - 8786
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  8866 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttatgttctctaagtttct 8786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 8440 - 8520
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||| ||||| ||||| || | ||||||||||||||||||||||| |||| |||||||||    
T  8440 ctttttggtcctctaactatttaattggtatcagattgatctt-taactaaaaattgatttatttcgatcctttaagtttct 8520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 15886 - 15806
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| || ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15886 tttttgatcctctaactatttaactggtatcggattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 15806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 15475 - 15545
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| |||| ||||||||||| |||||||| ||||||||||||||||| |||| | |||||||||    
T  15475 tctaactattcaattggtatcggattgatcctctaattaaaaattgatttattttggtcatttaagtttct 15545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 18285 - 18410
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 361  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||| |||| |||||||||          |||||||||||    
T  18285 tttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttaggtcttctaagtttctcaccgctactacatttagt 18384  T
Q  362 ccttcctgttaattttattcaaataa 387  Q
    |||| |||||| ||||||||||||||    
T  18385 cctttctgttagttttattcaaataa 18410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 18711 - 18633
Alignment:
Q  272 tttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 350  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18711 tttttggtcctttaattatttaattggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagttt 18633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 6420 - 6353
Alignment:
Q  284 taactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  6420 taactaattaattggtatcgtattggtcctctaactaaaaattga-ttatttcggtcctctaagtttct 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 6044 - 6090
Alignment:
Q  306 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6044 ttggtcctctaactaaaaattgatttatttcggtcttctaagtttct 6090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 9793 - 9875
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 353  Q
    ||||||||||   ||||||||||||| ||||||| ||| |||||||||||||| ||||||||||| |||||| ||||||||||    
T  9793 ctttttggtcccttaactatttaattggtatcggtttgctcctctaactaaaatttgatttattttggtcctttaagtttcta 9875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 10995 - 10914
Alignment:
Q  271 ctttttggtcatctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||   ||||||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||  |||||||||    
T  10995 ctttttggtcccttaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcccttaagtttct 10914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 14231 - 14283
Alignment:
Q  299 tatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14231 tatcggattggtc-tctaactaaaaattgatttatttcggtcctctaagtttct 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 144042 - 144101
Alignment:
Q  282 tctaactatttaatttgtatcggattggtcctctaactaaaaattgatttatttcggtcc 341  Q
    ||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||||||    
T  144042 tctaactatttaattggtatcatattggttctctaactaaaaattgatttatttcggtcc 144101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 147245 - 147198
Alignment:
Q  305 attggtcctctaactaaaaattgatttatttcggtcctctaagtttct 352  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||||    
T  147245 attggtcctcgaactaaaaattgatttatttcggtccgttaagtttct 147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 18292 - 18363
Alignment:
Q  146 cgtgaccttagctcagttggaagggacaatataaaaaatatgtaaggtcaatggttcgaattccggccacca 217  Q
    ||||| |||||||||||||| | ||||||| || || ||||| ||| || | ||||||||||||||||||||    
T  18292 cgtgagcttagctcagttggtaaggacaatgtataatatatgcaagatccagggttcgaattccggccacca 18363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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