View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13185_low_3 (Length: 254)
Name: NF13185_low_3
Description: NF13185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13185_low_3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 2115584 - 2115348
Alignment:
| Q |
18 |
agaagatgttcctagtagttcctacacccctccttctgatccttatgagttttctgatgacacttctgatacaaagctcaaattcatgacatgtgttcct |
117 |
Q |
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| T |
2115584 |
agaagatgttcctagtagttcctacacccctccttctgatccttatgagttttctgatgacacttctgatacaaaactcaaattcatgacatgtgttcct |
2115485 |
T |
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| Q |
118 |
gaaacagttcctccaagaatttcattctcatttccagttcctagggtttcatttgcaaaaagctctgtttcccctgctaccaccaactccaaacttggaa |
217 |
Q |
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| T |
2115484 |
gaaacagttcctccaagaatttcattctcatttccagttcctagggtttcatttgcaaaaagctctgtttcccctgctaccactaactccaaacttggaa |
2115385 |
T |
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| Q |
218 |
gctgtgatgtctacattggatttcatggacaaaatcc |
254 |
Q |
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| T |
2115384 |
gctgtgatgtctacattggattccatggacaaaatcc |
2115348 |
T |
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